Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00429.t1 | XP_003589183.2 | 97.9 | 384 | 8 | 0 | 1 | 384 | 82 | 465 | 2.90E-220 | 774.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00429.t1 | A9QNE7 | 71.6 | 387 | 105 | 4 | 1 | 385 | 87 | 470 | 1.3e-157 | 557.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00429.t1 | G7I3J9 | 97.9 | 384 | 8 | 0 | 1 | 384 | 82 | 465 | 2.1e-220 | 774.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00429.t1 | MTR_1g019410 | 97.917 | 384 | 8 | 0 | 1 | 384 | 82 | 465 | 0.0 | 778 |
MS.gene00429.t1 | MTR_4g086130 | 67.358 | 386 | 123 | 2 | 1 | 385 | 82 | 465 | 0.0 | 552 |
MS.gene00429.t1 | MTR_4g086040 | 66.408 | 387 | 126 | 3 | 1 | 385 | 85 | 469 | 0.0 | 539 |
MS.gene00429.t1 | MTR_8g072260 | 56.883 | 385 | 154 | 5 | 1 | 382 | 84 | 459 | 4.77e-159 | 456 |
MS.gene00429.t1 | MTR_5g025610 | 55.065 | 385 | 161 | 5 | 1 | 382 | 82 | 457 | 2.78e-152 | 439 |
MS.gene00429.t1 | MTR_8g072260 | 56.198 | 363 | 147 | 5 | 1 | 360 | 84 | 437 | 9.97e-148 | 427 |
MS.gene00429.t1 | MTR_5g025610 | 54.545 | 363 | 153 | 5 | 1 | 360 | 82 | 435 | 1.06e-141 | 411 |
MS.gene00429.t1 | MTR_1g037580 | 51.020 | 392 | 182 | 4 | 1 | 388 | 91 | 476 | 1.47e-129 | 381 |
MS.gene00429.t1 | MTR_8g072260 | 53.560 | 323 | 138 | 5 | 1 | 320 | 84 | 397 | 2.65e-119 | 354 |
MS.gene00429.t1 | MTR_5g025610 | 51.662 | 331 | 148 | 5 | 1 | 328 | 82 | 403 | 1.56e-115 | 343 |
MS.gene00429.t1 | MTR_6g034940 | 31.969 | 391 | 252 | 6 | 2 | 383 | 91 | 476 | 4.04e-70 | 228 |
MS.gene00429.t1 | MTR_2g031930 | 31.795 | 390 | 257 | 7 | 1 | 384 | 98 | 484 | 4.49e-68 | 223 |
MS.gene00429.t1 | MTR_2g031920 | 31.633 | 392 | 258 | 7 | 1 | 384 | 94 | 483 | 2.69e-64 | 213 |
MS.gene00429.t1 | MTR_2g031930 | 32.055 | 365 | 239 | 7 | 1 | 359 | 94 | 455 | 2.75e-63 | 210 |
MS.gene00429.t1 | MTR_8g077810 | 33.666 | 401 | 237 | 10 | 3 | 384 | 86 | 476 | 1.15e-62 | 210 |
MS.gene00429.t1 | MTR_7g033040 | 34.903 | 361 | 221 | 8 | 6 | 359 | 89 | 442 | 7.42e-62 | 207 |
MS.gene00429.t1 | MTR_8g089800 | 31.969 | 391 | 258 | 5 | 1 | 384 | 96 | 485 | 1.15e-61 | 207 |
MS.gene00429.t1 | MTR_5g082520 | 31.405 | 363 | 235 | 6 | 3 | 358 | 81 | 436 | 1.41e-60 | 203 |
MS.gene00429.t1 | MTR_8g016180 | 32.597 | 362 | 233 | 8 | 3 | 359 | 90 | 445 | 2.56e-59 | 200 |
MS.gene00429.t1 | MTR_6g015910 | 30.412 | 388 | 258 | 8 | 4 | 386 | 82 | 462 | 4.51e-59 | 199 |
MS.gene00429.t1 | MTR_3g007320 | 29.716 | 387 | 262 | 7 | 4 | 386 | 82 | 462 | 1.72e-58 | 197 |
MS.gene00429.t1 | MTR_5g092150 | 31.854 | 383 | 249 | 5 | 7 | 381 | 86 | 464 | 3.37e-58 | 197 |
MS.gene00429.t1 | MTR_0045s0060 | 30.412 | 388 | 261 | 8 | 1 | 386 | 13 | 393 | 6.67e-58 | 194 |
MS.gene00429.t1 | MTR_3g070380 | 31.319 | 364 | 234 | 6 | 3 | 357 | 82 | 438 | 7.57e-58 | 196 |
MS.gene00429.t1 | MTR_0045s0070 | 32.216 | 388 | 254 | 8 | 1 | 386 | 95 | 475 | 4.92e-57 | 194 |
MS.gene00429.t1 | MTR_8g100135 | 30.548 | 383 | 260 | 4 | 7 | 384 | 92 | 473 | 8.51e-57 | 193 |
MS.gene00429.t1 | MTR_7g016040 | 29.167 | 384 | 263 | 6 | 4 | 384 | 82 | 459 | 9.64e-57 | 193 |
MS.gene00429.t1 | MTR_0045s0060 | 30.412 | 388 | 261 | 8 | 1 | 386 | 95 | 475 | 1.14e-56 | 193 |
MS.gene00429.t1 | MTR_8g076940 | 31.742 | 356 | 240 | 2 | 4 | 358 | 101 | 454 | 1.30e-55 | 191 |
MS.gene00429.t1 | MTR_5g091760 | 31.202 | 391 | 255 | 7 | 1 | 384 | 90 | 473 | 3.26e-55 | 189 |
MS.gene00429.t1 | MTR_3g467140 | 30.649 | 385 | 259 | 4 | 6 | 383 | 89 | 472 | 8.27e-55 | 188 |
MS.gene00429.t1 | MTR_5g014250 | 31.282 | 390 | 261 | 6 | 1 | 384 | 98 | 486 | 3.59e-54 | 187 |
MS.gene00429.t1 | MTR_3g467130 | 29.793 | 386 | 263 | 4 | 6 | 384 | 89 | 473 | 4.60e-54 | 186 |
MS.gene00429.t1 | MTR_3g112120 | 31.538 | 390 | 257 | 6 | 2 | 384 | 94 | 480 | 8.27e-54 | 186 |
MS.gene00429.t1 | MTR_5g020020 | 31.688 | 385 | 251 | 7 | 9 | 384 | 95 | 476 | 6.24e-53 | 183 |
MS.gene00429.t1 | MTR_0045s0070 | 32.964 | 361 | 233 | 8 | 1 | 359 | 95 | 448 | 1.43e-52 | 181 |
MS.gene00429.t1 | MTR_3g467140 | 32.733 | 333 | 216 | 4 | 58 | 383 | 8 | 339 | 1.71e-52 | 179 |
MS.gene00429.t1 | MTR_4g005230 | 30.946 | 391 | 257 | 8 | 1 | 384 | 96 | 480 | 9.61e-52 | 180 |
MS.gene00429.t1 | MTR_5g014240 | 31.633 | 392 | 257 | 7 | 1 | 384 | 97 | 485 | 6.83e-50 | 176 |
MS.gene00429.t1 | MTR_8g012970 | 31.467 | 375 | 241 | 10 | 19 | 384 | 115 | 482 | 7.99e-50 | 175 |
MS.gene00429.t1 | MTR_5g021220 | 31.152 | 382 | 234 | 9 | 3 | 361 | 89 | 464 | 3.84e-49 | 173 |
MS.gene00429.t1 | MTR_8g016180 | 31.003 | 329 | 217 | 7 | 3 | 327 | 90 | 412 | 2.18e-48 | 169 |
MS.gene00429.t1 | MTR_8g076510 | 28.846 | 364 | 248 | 7 | 3 | 359 | 92 | 451 | 4.77e-47 | 167 |
MS.gene00429.t1 | MTR_5g020020 | 32.132 | 333 | 211 | 6 | 62 | 384 | 75 | 402 | 3.24e-46 | 164 |
MS.gene00429.t1 | MTR_5g010750 | 28.099 | 363 | 251 | 7 | 3 | 359 | 84 | 442 | 3.12e-45 | 162 |
MS.gene00429.t1 | MTR_8g076940 | 31.003 | 329 | 222 | 3 | 4 | 329 | 101 | 427 | 5.32e-45 | 161 |
MS.gene00429.t1 | MTR_5g010750 | 27.624 | 362 | 254 | 6 | 3 | 359 | 84 | 442 | 6.05e-45 | 162 |
MS.gene00429.t1 | MTR_1g032950 | 28.238 | 386 | 256 | 6 | 1 | 380 | 96 | 466 | 1.48e-44 | 161 |
MS.gene00429.t1 | MTR_8g089190 | 27.136 | 398 | 270 | 5 | 1 | 384 | 49 | 440 | 2.86e-44 | 159 |
MS.gene00429.t1 | MTR_0045s0080 | 30.745 | 322 | 208 | 6 | 1 | 320 | 95 | 403 | 2.30e-40 | 148 |
MS.gene00429.t1 | MTR_6g069000 | 27.793 | 367 | 248 | 7 | 3 | 359 | 93 | 452 | 2.66e-40 | 149 |
MS.gene00429.t1 | MTR_6g069000 | 27.793 | 367 | 248 | 7 | 3 | 359 | 103 | 462 | 2.89e-40 | 149 |
MS.gene00429.t1 | MTR_7g016040 | 27.660 | 282 | 198 | 4 | 4 | 284 | 82 | 358 | 1.00e-35 | 135 |
MS.gene00429.t1 | MTR_8g076940 | 29.787 | 282 | 195 | 2 | 4 | 284 | 101 | 380 | 6.30e-33 | 127 |
MS.gene00429.t1 | MTR_8g076940 | 29.787 | 282 | 195 | 2 | 4 | 284 | 101 | 380 | 6.70e-33 | 127 |
MS.gene00429.t1 | MTR_8g100135 | 25.850 | 294 | 213 | 3 | 7 | 296 | 92 | 384 | 6.91e-29 | 117 |
MS.gene00429.t1 | MTR_8g006450 | 25.758 | 396 | 255 | 14 | 1 | 375 | 84 | 461 | 8.38e-26 | 109 |
MS.gene00429.t1 | MTR_8g006495 | 29.615 | 260 | 155 | 8 | 129 | 375 | 104 | 348 | 3.75e-25 | 105 |
MS.gene00429.t1 | MTR_0147s0030 | 25.501 | 349 | 220 | 11 | 48 | 367 | 172 | 509 | 1.65e-23 | 102 |
MS.gene00429.t1 | MTR_8g008530 | 24.804 | 383 | 258 | 10 | 10 | 367 | 120 | 497 | 1.95e-23 | 102 |
MS.gene00429.t1 | MTR_1g032980 | 28.821 | 229 | 159 | 2 | 12 | 236 | 79 | 307 | 8.10e-23 | 99.8 |
MS.gene00429.t1 | MTR_7g055793 | 24.103 | 390 | 250 | 13 | 10 | 367 | 72 | 447 | 1.25e-21 | 96.7 |
MS.gene00429.t1 | MTR_7g055793 | 24.103 | 390 | 250 | 13 | 10 | 367 | 127 | 502 | 2.54e-21 | 96.3 |
MS.gene00429.t1 | MTR_8g469360 | 25.907 | 386 | 240 | 15 | 14 | 367 | 31 | 402 | 2.29e-20 | 92.8 |
MS.gene00429.t1 | MTR_4g071710 | 29.866 | 298 | 166 | 12 | 135 | 399 | 229 | 516 | 6.82e-20 | 92.0 |
MS.gene00429.t1 | MTR_8g089190 | 23.607 | 305 | 215 | 4 | 1 | 293 | 49 | 347 | 1.09e-19 | 89.7 |
MS.gene00429.t1 | MTR_2g019640 | 24.479 | 384 | 245 | 10 | 28 | 377 | 117 | 489 | 2.66e-19 | 90.1 |
MS.gene00429.t1 | MTR_3g104560 | 30.738 | 244 | 141 | 7 | 132 | 358 | 271 | 503 | 6.31e-19 | 89.0 |
MS.gene00429.t1 | MTR_3g104560 | 30.738 | 244 | 141 | 7 | 132 | 358 | 136 | 368 | 6.60e-19 | 88.2 |
MS.gene00429.t1 | MTR_1g035140 | 27.027 | 370 | 231 | 15 | 1 | 339 | 84 | 445 | 5.80e-18 | 85.9 |
MS.gene00429.t1 | MTR_4g088195 | 25.746 | 268 | 166 | 9 | 146 | 394 | 245 | 498 | 3.01e-17 | 84.0 |
MS.gene00429.t1 | MTR_6g017325 | 27.007 | 274 | 177 | 8 | 133 | 393 | 244 | 507 | 4.80e-17 | 83.2 |
MS.gene00429.t1 | MTR_6g022450 | 29.348 | 184 | 117 | 6 | 188 | 362 | 301 | 480 | 1.69e-16 | 81.6 |
MS.gene00429.t1 | MTR_8g466180 | 26.906 | 223 | 144 | 7 | 148 | 354 | 246 | 465 | 3.52e-16 | 80.5 |
MS.gene00429.t1 | MTR_1g107295 | 27.132 | 258 | 152 | 8 | 139 | 369 | 241 | 489 | 4.96e-16 | 80.1 |
MS.gene00429.t1 | MTR_1g031700 | 25.110 | 227 | 157 | 5 | 147 | 364 | 245 | 467 | 5.94e-16 | 79.7 |
MS.gene00429.t1 | MTR_0457s0020 | 29.187 | 209 | 141 | 6 | 19 | 225 | 17 | 220 | 1.52e-15 | 75.9 |
MS.gene00429.t1 | MTR_4g088160 | 25.306 | 245 | 160 | 8 | 146 | 372 | 245 | 484 | 1.93e-15 | 78.2 |
MS.gene00429.t1 | MTR_5g014230 | 39.759 | 83 | 49 | 1 | 303 | 384 | 2 | 84 | 2.03e-15 | 72.4 |
MS.gene00429.t1 | MTR_4g088170 | 25.403 | 248 | 158 | 8 | 146 | 372 | 245 | 486 | 2.43e-15 | 78.2 |
MS.gene00429.t1 | MTR_3g093530 | 24.074 | 378 | 251 | 13 | 17 | 366 | 132 | 501 | 4.37e-15 | 77.4 |
MS.gene00429.t1 | MTR_5g021390 | 25.105 | 239 | 156 | 4 | 144 | 362 | 246 | 481 | 5.88e-15 | 77.0 |
MS.gene00429.t1 | MTR_2g073440 | 28.400 | 250 | 158 | 8 | 146 | 384 | 226 | 465 | 8.06e-15 | 76.3 |
MS.gene00429.t1 | MTR_1g015860 | 28.395 | 243 | 148 | 8 | 132 | 358 | 263 | 495 | 1.01e-14 | 76.3 |
MS.gene00429.t1 | MTR_8g012590 | 28.261 | 184 | 119 | 5 | 188 | 362 | 290 | 469 | 1.10e-14 | 75.9 |
MS.gene00429.t1 | MTR_2g073480 | 28.400 | 250 | 158 | 8 | 146 | 384 | 159 | 398 | 1.11e-14 | 75.5 |
MS.gene00429.t1 | MTR_0171s0020 | 25.339 | 221 | 146 | 5 | 139 | 343 | 240 | 457 | 1.32e-14 | 75.9 |
MS.gene00429.t1 | MTR_5g073020 | 28.251 | 223 | 144 | 7 | 150 | 362 | 254 | 470 | 1.70e-14 | 75.5 |
MS.gene00429.t1 | MTR_4g029690 | 25.847 | 236 | 165 | 5 | 1 | 231 | 96 | 326 | 1.85e-14 | 74.3 |
MS.gene00429.t1 | MTR_1g107300 | 27.419 | 186 | 114 | 4 | 196 | 369 | 1 | 177 | 3.21e-14 | 71.6 |
MS.gene00429.t1 | MTR_8g080520 | 26.330 | 376 | 224 | 17 | 5 | 343 | 119 | 478 | 3.52e-14 | 74.3 |
MS.gene00429.t1 | MTR_3g076560 | 25.676 | 222 | 152 | 6 | 146 | 358 | 262 | 479 | 4.19e-14 | 74.3 |
MS.gene00429.t1 | MTR_5g009110 | 23.963 | 217 | 127 | 5 | 183 | 365 | 185 | 397 | 1.12e-13 | 72.8 |
MS.gene00429.t1 | MTR_2g437840 | 26.633 | 199 | 138 | 4 | 147 | 343 | 250 | 442 | 1.43e-13 | 72.4 |
MS.gene00429.t1 | MTR_7g006900 | 27.572 | 243 | 156 | 7 | 134 | 362 | 209 | 445 | 1.46e-13 | 72.4 |
MS.gene00429.t1 | MTR_5g009110 | 23.963 | 217 | 127 | 5 | 183 | 365 | 333 | 545 | 2.18e-13 | 72.0 |
MS.gene00429.t1 | MTR_5g072980 | 26.316 | 228 | 156 | 6 | 143 | 362 | 247 | 470 | 2.52e-13 | 71.6 |
MS.gene00429.t1 | MTR_5g072930 | 26.316 | 228 | 156 | 6 | 143 | 362 | 247 | 470 | 2.52e-13 | 71.6 |
MS.gene00429.t1 | MTR_7g079440 | 22.751 | 189 | 135 | 3 | 182 | 363 | 437 | 621 | 3.15e-13 | 71.6 |
MS.gene00429.t1 | MTR_8g076290 | 25.103 | 243 | 143 | 6 | 120 | 339 | 224 | 450 | 3.23e-13 | 71.6 |
MS.gene00429.t1 | MTR_4g048580 | 22.740 | 365 | 251 | 15 | 1 | 339 | 86 | 445 | 3.98e-13 | 71.2 |
MS.gene00429.t1 | MTR_3g076530 | 25.112 | 223 | 158 | 6 | 147 | 362 | 251 | 471 | 4.41e-13 | 71.2 |
MS.gene00429.t1 | MTR_3g057980 | 28.780 | 205 | 120 | 7 | 151 | 339 | 247 | 441 | 7.25e-13 | 70.5 |
MS.gene00429.t1 | MTR_4g104660 | 26.432 | 227 | 145 | 8 | 148 | 358 | 257 | 477 | 7.30e-13 | 70.5 |
MS.gene00429.t1 | MTR_8g042020 | 23.214 | 392 | 259 | 13 | 23 | 380 | 132 | 515 | 8.60e-13 | 70.1 |
MS.gene00429.t1 | MTR_4g062510 | 25.391 | 256 | 162 | 7 | 139 | 369 | 240 | 491 | 9.03e-13 | 70.1 |
MS.gene00429.t1 | MTR_2g073420 | 27.530 | 247 | 161 | 8 | 146 | 379 | 254 | 495 | 1.12e-12 | 69.7 |
MS.gene00429.t1 | MTR_8g073950 | 26.606 | 218 | 146 | 6 | 151 | 358 | 272 | 485 | 1.12e-12 | 69.7 |
MS.gene00429.t1 | MTR_5g016410 | 23.982 | 221 | 160 | 5 | 146 | 364 | 249 | 463 | 1.38e-12 | 69.3 |
MS.gene00429.t1 | MTR_3g058000 | 23.592 | 373 | 244 | 15 | 1 | 339 | 85 | 450 | 1.81e-12 | 69.3 |
MS.gene00429.t1 | MTR_1g097220 | 21.429 | 392 | 265 | 12 | 3 | 359 | 113 | 496 | 2.00e-12 | 68.9 |
MS.gene00429.t1 | MTR_2g072260 | 22.589 | 394 | 270 | 11 | 2 | 367 | 103 | 489 | 3.35e-12 | 68.2 |
MS.gene00429.t1 | MTR_8g098565 | 28.947 | 190 | 122 | 4 | 186 | 363 | 289 | 477 | 3.56e-12 | 68.2 |
MS.gene00429.t1 | MTR_8g073960 | 26.606 | 218 | 146 | 6 | 151 | 358 | 276 | 489 | 3.63e-12 | 68.2 |
MS.gene00429.t1 | MTR_1g085680 | 21.801 | 422 | 270 | 13 | 2 | 382 | 108 | 510 | 3.75e-12 | 68.2 |
MS.gene00429.t1 | MTR_1g062190 | 24.561 | 285 | 194 | 10 | 119 | 389 | 263 | 540 | 5.46e-12 | 67.8 |
MS.gene00429.t1 | MTR_2g072340 | 21.563 | 371 | 250 | 10 | 29 | 367 | 133 | 494 | 6.35e-12 | 67.4 |
MS.gene00429.t1 | MTR_5g045250 | 23.316 | 386 | 259 | 14 | 3 | 359 | 108 | 485 | 7.09e-12 | 67.4 |
MS.gene00429.t1 | MTR_4g077210 | 24.229 | 227 | 161 | 6 | 146 | 365 | 251 | 473 | 7.22e-12 | 67.4 |
MS.gene00429.t1 | MTR_8g076372 | 25.806 | 217 | 136 | 5 | 151 | 358 | 276 | 476 | 7.33e-12 | 67.4 |
MS.gene00429.t1 | MTR_5g094540 | 23.118 | 372 | 249 | 11 | 1 | 343 | 86 | 449 | 8.68e-12 | 67.0 |
MS.gene00429.t1 | MTR_3g076550 | 25.652 | 230 | 137 | 9 | 136 | 355 | 240 | 445 | 9.05e-12 | 67.0 |
MS.gene00429.t1 | MTR_4g035330 | 26.425 | 193 | 136 | 4 | 152 | 343 | 243 | 430 | 9.06e-12 | 67.0 |
MS.gene00429.t1 | MTR_1g037370 | 24.454 | 229 | 158 | 7 | 147 | 365 | 242 | 465 | 1.20e-11 | 66.6 |
MS.gene00429.t1 | MTR_2g023680 | 22.111 | 398 | 269 | 12 | 1 | 367 | 109 | 496 | 1.27e-11 | 66.6 |
MS.gene00429.t1 | MTR_7g098550 | 24.474 | 380 | 261 | 13 | 2 | 366 | 106 | 474 | 1.36e-11 | 66.2 |
MS.gene00429.t1 | MTR_6g008650 | 27.917 | 240 | 141 | 11 | 140 | 358 | 257 | 485 | 1.47e-11 | 66.2 |
MS.gene00429.t1 | MTR_7g098550 | 24.806 | 387 | 259 | 14 | 2 | 366 | 106 | 482 | 1.49e-11 | 66.2 |
MS.gene00429.t1 | MTR_4g104570 | 25.140 | 179 | 125 | 3 | 198 | 370 | 1 | 176 | 1.51e-11 | 63.5 |
MS.gene00429.t1 | MTR_7g075610 | 25.862 | 232 | 157 | 7 | 136 | 358 | 242 | 467 | 1.71e-11 | 66.2 |
MS.gene00429.t1 | MTR_5g095260 | 25.064 | 391 | 247 | 17 | 1 | 358 | 88 | 465 | 1.84e-11 | 65.9 |
MS.gene00429.t1 | MTR_3g058240 | 25.134 | 374 | 238 | 18 | 1 | 340 | 48 | 413 | 2.08e-11 | 65.9 |
MS.gene00429.t1 | MTR_1g055325 | 26.506 | 249 | 164 | 7 | 146 | 384 | 264 | 503 | 2.11e-11 | 65.9 |
MS.gene00429.t1 | MTR_8g046210 | 26.512 | 215 | 145 | 6 | 139 | 343 | 244 | 455 | 2.26e-11 | 65.9 |
MS.gene00429.t1 | MTR_7g075580 | 26.244 | 221 | 151 | 6 | 146 | 358 | 250 | 466 | 2.34e-11 | 65.9 |
MS.gene00429.t1 | MTR_3g025260 | 27.642 | 246 | 158 | 8 | 132 | 362 | 234 | 474 | 2.59e-11 | 65.5 |
MS.gene00429.t1 | MTR_4g104540 | 24.725 | 182 | 128 | 3 | 195 | 370 | 229 | 407 | 3.49e-11 | 65.1 |
MS.gene00429.t1 | MTR_2g437880 | 26.020 | 196 | 141 | 3 | 150 | 344 | 256 | 448 | 3.65e-11 | 65.1 |
MS.gene00429.t1 | MTR_5g095220 | 22.917 | 336 | 218 | 12 | 32 | 339 | 93 | 415 | 4.42e-11 | 64.7 |
MS.gene00429.t1 | MTR_4g062500 | 25.498 | 251 | 160 | 7 | 139 | 366 | 238 | 484 | 4.56e-11 | 64.7 |
MS.gene00429.t1 | MTR_3g025230 | 28.745 | 247 | 154 | 9 | 132 | 362 | 234 | 474 | 4.86e-11 | 64.7 |
MS.gene00429.t1 | MTR_4g095050 | 23.005 | 213 | 154 | 6 | 135 | 344 | 242 | 447 | 4.98e-11 | 64.7 |
MS.gene00429.t1 | MTR_5g016440 | 21.575 | 292 | 200 | 8 | 78 | 364 | 193 | 460 | 6.25e-11 | 64.3 |
MS.gene00429.t1 | MTR_7g092620 | 25.641 | 156 | 106 | 2 | 195 | 343 | 303 | 455 | 6.30e-11 | 64.3 |
MS.gene00429.t1 | MTR_3g024520 | 28.049 | 246 | 157 | 8 | 132 | 362 | 234 | 474 | 6.82e-11 | 64.3 |
MS.gene00429.t1 | MTR_3g058060 | 23.784 | 370 | 246 | 14 | 1 | 339 | 85 | 449 | 7.23e-11 | 64.3 |
MS.gene00429.t1 | MTR_7g103450 | 24.473 | 237 | 159 | 7 | 144 | 369 | 262 | 489 | 9.02e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00429.t1 | AT3G19270 | 65.544 | 386 | 129 | 3 | 1 | 385 | 81 | 463 | 0.0 | 534 |
MS.gene00429.t1 | AT3G19270 | 65.833 | 360 | 119 | 3 | 1 | 359 | 81 | 437 | 3.98e-178 | 503 |
MS.gene00429.t1 | AT4G19230 | 56.021 | 382 | 160 | 3 | 1 | 382 | 83 | 456 | 3.14e-162 | 464 |
MS.gene00429.t1 | AT5G45340 | 55.759 | 382 | 161 | 3 | 1 | 382 | 83 | 456 | 4.33e-162 | 464 |
MS.gene00429.t1 | AT4G19230 | 52.120 | 401 | 177 | 5 | 1 | 400 | 83 | 469 | 1.11e-151 | 438 |
MS.gene00429.t1 | AT5G45340 | 55.278 | 360 | 153 | 3 | 1 | 360 | 83 | 434 | 3.47e-151 | 435 |
MS.gene00429.t1 | AT2G29090 | 53.728 | 389 | 169 | 5 | 1 | 384 | 1 | 383 | 5.33e-147 | 422 |
MS.gene00429.t1 | AT2G29090 | 53.728 | 389 | 169 | 5 | 1 | 384 | 96 | 478 | 1.79e-144 | 419 |
MS.gene00429.t1 | AT2G29090 | 53.728 | 389 | 169 | 5 | 1 | 384 | 96 | 478 | 1.79e-144 | 419 |
MS.gene00429.t1 | AT1G05160 | 32.911 | 395 | 256 | 6 | 1 | 388 | 98 | 490 | 4.70e-72 | 234 |
MS.gene00429.t1 | AT1G05160 | 32.911 | 395 | 256 | 6 | 1 | 388 | 98 | 490 | 4.70e-72 | 234 |
MS.gene00429.t1 | AT2G32440 | 32.134 | 389 | 257 | 5 | 1 | 384 | 97 | 483 | 3.19e-67 | 221 |
MS.gene00429.t1 | AT2G32440 | 32.134 | 389 | 257 | 5 | 1 | 384 | 97 | 483 | 3.19e-67 | 221 |
MS.gene00429.t1 | AT2G29090 | 48.696 | 230 | 114 | 3 | 1 | 229 | 96 | 322 | 2.89e-63 | 207 |
MS.gene00429.t1 | AT5G05690 | 33.333 | 363 | 228 | 6 | 3 | 358 | 84 | 439 | 1.72e-58 | 198 |
MS.gene00429.t1 | AT5G36110 | 34.015 | 391 | 244 | 8 | 1 | 384 | 89 | 472 | 4.56e-58 | 197 |
MS.gene00429.t1 | AT1G19630 | 32.487 | 394 | 255 | 7 | 2 | 389 | 88 | 476 | 2.68e-56 | 192 |
MS.gene00429.t1 | AT1G19630 | 32.692 | 364 | 235 | 6 | 2 | 360 | 88 | 446 | 2.58e-54 | 186 |
MS.gene00429.t1 | AT5G38970 | 28.650 | 363 | 250 | 6 | 6 | 364 | 4 | 361 | 1.74e-53 | 182 |
MS.gene00429.t1 | AT5G38970 | 28.650 | 363 | 250 | 6 | 6 | 364 | 4 | 361 | 1.74e-53 | 182 |
MS.gene00429.t1 | AT5G38970 | 28.571 | 364 | 251 | 6 | 6 | 365 | 85 | 443 | 6.87e-53 | 183 |
MS.gene00429.t1 | AT3G50660 | 31.221 | 426 | 228 | 11 | 9 | 384 | 98 | 508 | 2.11e-52 | 182 |
MS.gene00429.t1 | AT3G30180 | 30.110 | 362 | 246 | 6 | 6 | 364 | 85 | 442 | 2.82e-51 | 179 |
MS.gene00429.t1 | AT5G05690 | 32.515 | 326 | 206 | 6 | 40 | 358 | 2 | 320 | 3.31e-50 | 173 |
MS.gene00429.t1 | AT3G13730 | 30.790 | 367 | 238 | 9 | 3 | 359 | 104 | 464 | 3.46e-49 | 173 |
MS.gene00429.t1 | AT3G13730 | 31.044 | 364 | 235 | 9 | 6 | 359 | 107 | 464 | 5.60e-49 | 173 |
MS.gene00429.t1 | AT1G12740 | 28.142 | 366 | 249 | 5 | 6 | 363 | 87 | 446 | 1.71e-48 | 171 |
MS.gene00429.t1 | AT1G12740 | 28.142 | 366 | 249 | 5 | 6 | 363 | 93 | 452 | 1.97e-48 | 171 |
MS.gene00429.t1 | AT5G05690 | 32.188 | 320 | 207 | 4 | 3 | 319 | 84 | 396 | 5.28e-48 | 168 |
MS.gene00429.t1 | AT4G36380 | 30.685 | 365 | 236 | 10 | 6 | 358 | 125 | 484 | 1.21e-46 | 167 |
MS.gene00429.t1 | AT1G12740 | 27.957 | 372 | 248 | 6 | 6 | 363 | 87 | 452 | 1.52e-46 | 166 |
MS.gene00429.t1 | AT2G42850 | 30.052 | 386 | 255 | 9 | 6 | 384 | 102 | 479 | 4.67e-46 | 165 |
MS.gene00429.t1 | AT5G38970 | 28.840 | 319 | 220 | 5 | 6 | 322 | 85 | 398 | 1.68e-45 | 162 |
MS.gene00429.t1 | AT1G19630 | 32.615 | 325 | 209 | 6 | 2 | 321 | 88 | 407 | 3.38e-44 | 159 |
MS.gene00429.t1 | AT5G14400 | 30.137 | 365 | 218 | 12 | 6 | 360 | 52 | 389 | 1.03e-42 | 154 |
MS.gene00429.t1 | AT5G14400 | 30.110 | 362 | 218 | 11 | 10 | 362 | 2 | 337 | 1.27e-42 | 153 |
MS.gene00429.t1 | AT5G14400 | 29.973 | 367 | 220 | 12 | 6 | 362 | 52 | 391 | 2.21e-42 | 154 |
MS.gene00429.t1 | AT1G55940 | 27.520 | 367 | 253 | 9 | 3 | 358 | 99 | 463 | 2.78e-41 | 152 |
MS.gene00429.t1 | AT1G55940 | 26.882 | 372 | 259 | 9 | 3 | 363 | 99 | 468 | 4.37e-41 | 152 |
MS.gene00429.t1 | AT5G48000 | 26.914 | 405 | 267 | 11 | 1 | 389 | 86 | 477 | 6.93e-38 | 143 |
MS.gene00429.t1 | AT5G48000 | 26.914 | 405 | 267 | 11 | 1 | 389 | 86 | 477 | 6.93e-38 | 143 |
MS.gene00429.t1 | AT5G48000 | 26.914 | 405 | 267 | 11 | 1 | 389 | 86 | 477 | 6.93e-38 | 143 |
MS.gene00429.t1 | AT5G48000 | 26.914 | 405 | 267 | 11 | 1 | 389 | 86 | 477 | 6.93e-38 | 143 |
MS.gene00429.t1 | AT5G48000 | 26.914 | 405 | 267 | 11 | 1 | 389 | 86 | 477 | 6.93e-38 | 143 |
MS.gene00429.t1 | AT5G48000 | 26.914 | 405 | 267 | 11 | 1 | 389 | 86 | 477 | 6.93e-38 | 143 |
MS.gene00429.t1 | AT3G50660 | 29.942 | 344 | 198 | 8 | 9 | 319 | 98 | 431 | 1.34e-37 | 141 |
MS.gene00429.t1 | AT5G48000 | 26.700 | 397 | 278 | 10 | 1 | 389 | 127 | 518 | 1.46e-37 | 142 |
MS.gene00429.t1 | AT4G15393 | 28.863 | 343 | 227 | 8 | 21 | 354 | 103 | 437 | 2.54e-37 | 141 |
MS.gene00429.t1 | AT1G65670 | 29.619 | 341 | 224 | 7 | 21 | 354 | 103 | 434 | 3.17e-37 | 141 |
MS.gene00429.t1 | AT1G73340 | 25.753 | 365 | 255 | 5 | 3 | 359 | 96 | 452 | 3.26e-37 | 141 |
MS.gene00429.t1 | AT1G78490 | 27.446 | 368 | 257 | 7 | 3 | 363 | 88 | 452 | 5.91e-37 | 140 |
MS.gene00429.t1 | AT3G44970 | 27.222 | 360 | 250 | 8 | 11 | 362 | 96 | 451 | 6.07e-35 | 135 |
MS.gene00429.t1 | AT4G15396 | 27.485 | 342 | 235 | 7 | 21 | 354 | 103 | 439 | 8.48e-33 | 128 |
MS.gene00429.t1 | AT4G15396 | 27.485 | 342 | 235 | 7 | 21 | 354 | 103 | 439 | 9.62e-33 | 129 |
MS.gene00429.t1 | AT4G15300 | 28.818 | 347 | 223 | 12 | 21 | 354 | 93 | 428 | 2.10e-32 | 127 |
MS.gene00429.t1 | AT4G15300 | 28.818 | 347 | 223 | 12 | 21 | 354 | 103 | 438 | 2.35e-32 | 127 |
MS.gene00429.t1 | AT5G36130 | 47.407 | 135 | 69 | 2 | 252 | 384 | 1 | 135 | 3.85e-32 | 119 |
MS.gene00429.t1 | AT4G15300 | 28.255 | 361 | 221 | 14 | 21 | 354 | 101 | 450 | 1.34e-29 | 120 |
MS.gene00429.t1 | AT5G36110 | 29.866 | 298 | 197 | 6 | 1 | 293 | 89 | 379 | 2.49e-29 | 117 |
MS.gene00429.t1 | AT3G30290 | 25.806 | 341 | 241 | 7 | 21 | 354 | 33 | 368 | 1.02e-28 | 116 |
MS.gene00429.t1 | AT4G15393 | 27.213 | 305 | 209 | 7 | 21 | 320 | 103 | 399 | 1.71e-27 | 112 |
MS.gene00429.t1 | AT1G78490 | 26.398 | 322 | 230 | 6 | 3 | 320 | 88 | 406 | 1.92e-27 | 113 |
MS.gene00429.t1 | AT1G12740 | 24.567 | 289 | 207 | 4 | 3 | 286 | 84 | 366 | 2.43e-27 | 112 |
MS.gene00429.t1 | AT4G15396 | 25.872 | 344 | 217 | 8 | 21 | 354 | 103 | 418 | 2.24e-25 | 107 |
MS.gene00429.t1 | AT5G14400 | 28.125 | 288 | 189 | 10 | 6 | 284 | 52 | 330 | 3.19e-25 | 105 |
MS.gene00429.t1 | AT4G15396 | 25.987 | 304 | 216 | 6 | 21 | 320 | 103 | 401 | 2.62e-24 | 103 |
MS.gene00429.t1 | AT4G36380 | 28.223 | 287 | 193 | 8 | 6 | 284 | 125 | 406 | 1.19e-23 | 102 |
MS.gene00429.t1 | AT4G15310 | 27.273 | 341 | 237 | 7 | 25 | 359 | 110 | 445 | 2.26e-23 | 102 |
MS.gene00429.t1 | AT2G42850 | 28.333 | 300 | 200 | 9 | 1 | 293 | 97 | 388 | 4.63e-23 | 100 |
MS.gene00429.t1 | AT1G11680 | 24.439 | 401 | 270 | 14 | 2 | 380 | 87 | 476 | 8.54e-23 | 100 |
MS.gene00429.t1 | AT4G15393 | 25.954 | 262 | 183 | 5 | 63 | 320 | 112 | 366 | 1.09e-21 | 95.9 |
MS.gene00429.t1 | AT5G67310 | 30.000 | 230 | 146 | 8 | 139 | 361 | 248 | 469 | 8.71e-19 | 88.6 |
MS.gene00429.t1 | AT4G37370 | 25.000 | 228 | 163 | 5 | 147 | 372 | 247 | 468 | 9.80e-18 | 85.5 |
MS.gene00429.t1 | AT4G37320 | 25.000 | 220 | 159 | 3 | 147 | 365 | 248 | 462 | 4.31e-17 | 83.6 |
MS.gene00429.t1 | AT4G37340 | 26.250 | 240 | 161 | 6 | 131 | 364 | 232 | 461 | 5.19e-17 | 83.2 |
MS.gene00429.t1 | AT4G37400 | 26.141 | 241 | 163 | 5 | 126 | 358 | 223 | 456 | 1.49e-16 | 81.6 |
MS.gene00429.t1 | AT5G24910 | 21.636 | 379 | 250 | 10 | 17 | 358 | 133 | 501 | 1.99e-16 | 81.6 |
MS.gene00429.t1 | AT2G45580 | 26.180 | 233 | 154 | 6 | 132 | 351 | 83 | 310 | 3.30e-16 | 79.7 |
MS.gene00429.t1 | AT5G25120 | 30.242 | 248 | 134 | 12 | 170 | 394 | 262 | 493 | 3.65e-16 | 80.5 |
MS.gene00429.t1 | AT5G04330 | 22.785 | 395 | 264 | 10 | 1 | 358 | 78 | 468 | 4.67e-16 | 80.1 |
MS.gene00429.t1 | AT2G26170 | 29.707 | 239 | 142 | 7 | 132 | 354 | 173 | 401 | 5.49e-16 | 79.7 |
MS.gene00429.t1 | AT2G45580 | 26.180 | 233 | 154 | 6 | 132 | 351 | 237 | 464 | 6.06e-16 | 80.1 |
MS.gene00429.t1 | AT4G13770 | 23.858 | 394 | 265 | 12 | 1 | 362 | 77 | 467 | 6.10e-16 | 79.7 |
MS.gene00429.t1 | AT2G26170 | 29.707 | 239 | 142 | 7 | 132 | 354 | 256 | 484 | 7.85e-16 | 79.7 |
MS.gene00429.t1 | AT4G37410 | 26.872 | 227 | 151 | 7 | 132 | 350 | 230 | 449 | 1.12e-15 | 79.0 |
MS.gene00429.t1 | AT4G27710 | 24.603 | 378 | 248 | 11 | 35 | 383 | 143 | 512 | 1.57e-15 | 78.6 |
MS.gene00429.t1 | AT2G28850 | 21.910 | 356 | 254 | 7 | 28 | 365 | 114 | 463 | 1.83e-15 | 78.6 |
MS.gene00429.t1 | AT1G50520 | 23.361 | 244 | 172 | 4 | 139 | 370 | 250 | 490 | 2.18e-15 | 78.2 |
MS.gene00429.t1 | AT2G34500 | 22.409 | 357 | 226 | 13 | 28 | 356 | 113 | 446 | 2.27e-15 | 78.2 |
MS.gene00429.t1 | AT5G36140 | 25.862 | 232 | 160 | 7 | 1 | 227 | 85 | 309 | 2.35e-15 | 77.0 |
MS.gene00429.t1 | AT2G34490 | 22.792 | 351 | 236 | 12 | 28 | 356 | 114 | 451 | 2.92e-15 | 77.8 |
MS.gene00429.t1 | AT5G25130 | 28.378 | 222 | 136 | 8 | 186 | 394 | 282 | 493 | 3.12e-15 | 77.8 |
MS.gene00429.t1 | AT4G37310 | 25.207 | 242 | 174 | 4 | 139 | 373 | 242 | 483 | 3.51e-15 | 77.8 |
MS.gene00429.t1 | AT5G57220 | 26.190 | 252 | 170 | 6 | 121 | 363 | 211 | 455 | 3.56e-15 | 77.4 |
MS.gene00429.t1 | AT1G66540 | 25.112 | 223 | 154 | 5 | 147 | 364 | 75 | 289 | 3.98e-15 | 76.3 |
MS.gene00429.t1 | AT1G66540 | 25.112 | 223 | 154 | 5 | 147 | 364 | 134 | 348 | 7.13e-15 | 76.3 |
MS.gene00429.t1 | AT1G74110 | 22.304 | 408 | 264 | 13 | 1 | 364 | 113 | 511 | 1.03e-14 | 76.3 |
MS.gene00429.t1 | AT3G28740 | 25.514 | 243 | 172 | 5 | 124 | 363 | 232 | 468 | 1.55e-14 | 75.5 |
MS.gene00429.t1 | AT4G37360 | 27.322 | 183 | 127 | 3 | 184 | 364 | 283 | 461 | 1.68e-14 | 75.5 |
MS.gene00429.t1 | AT4G37430 | 25.424 | 236 | 162 | 6 | 135 | 363 | 236 | 464 | 2.37e-14 | 75.1 |
MS.gene00429.t1 | AT1G31800 | 24.020 | 204 | 142 | 4 | 167 | 363 | 345 | 542 | 2.44e-14 | 75.1 |
MS.gene00429.t1 | AT3G20940 | 25.306 | 245 | 167 | 5 | 139 | 370 | 247 | 488 | 3.30e-14 | 74.7 |
MS.gene00429.t1 | AT5G06900 | 26.754 | 228 | 158 | 5 | 144 | 365 | 244 | 468 | 8.92e-14 | 73.2 |
MS.gene00429.t1 | AT4G15110 | 23.502 | 217 | 128 | 3 | 183 | 365 | 341 | 553 | 1.47e-13 | 72.8 |
MS.gene00429.t1 | AT1G33730 | 27.706 | 231 | 152 | 8 | 137 | 358 | 111 | 335 | 3.26e-13 | 70.9 |
MS.gene00429.t1 | AT1G33730 | 27.706 | 231 | 152 | 8 | 137 | 358 | 111 | 335 | 3.26e-13 | 70.9 |
MS.gene00429.t1 | AT4G37330 | 24.658 | 219 | 159 | 4 | 147 | 364 | 245 | 458 | 4.35e-13 | 71.2 |
MS.gene00429.t1 | AT2G24180 | 26.829 | 205 | 135 | 6 | 146 | 339 | 248 | 448 | 4.95e-13 | 70.9 |
MS.gene00429.t1 | AT2G22330 | 26.180 | 233 | 151 | 9 | 151 | 370 | 311 | 535 | 7.48e-13 | 70.5 |
MS.gene00429.t1 | AT2G22330 | 26.180 | 233 | 151 | 9 | 151 | 370 | 288 | 512 | 7.64e-13 | 70.5 |
MS.gene00429.t1 | AT3G53130 | 21.945 | 401 | 258 | 15 | 10 | 363 | 121 | 513 | 7.94e-13 | 70.5 |
MS.gene00429.t1 | AT5G25140 | 30.108 | 186 | 111 | 9 | 167 | 339 | 259 | 438 | 1.77e-12 | 69.3 |
MS.gene00429.t1 | AT1G64940 | 28.191 | 188 | 126 | 3 | 186 | 366 | 298 | 483 | 2.21e-12 | 68.9 |
MS.gene00429.t1 | AT3G26160 | 23.502 | 217 | 154 | 4 | 137 | 343 | 236 | 450 | 3.14e-12 | 68.6 |
MS.gene00429.t1 | AT3G26270 | 24.057 | 212 | 131 | 6 | 147 | 339 | 247 | 447 | 3.19e-12 | 68.6 |
MS.gene00429.t1 | AT2G23190 | 23.482 | 247 | 178 | 6 | 122 | 364 | 266 | 505 | 4.09e-12 | 68.2 |
MS.gene00429.t1 | AT2G46950 | 22.901 | 393 | 265 | 11 | 2 | 366 | 165 | 547 | 5.17e-12 | 67.8 |
MS.gene00429.t1 | AT2G23220 | 21.818 | 220 | 164 | 4 | 147 | 364 | 263 | 476 | 6.74e-12 | 67.4 |
MS.gene00429.t1 | AT3G26290 | 26.238 | 202 | 135 | 6 | 148 | 339 | 245 | 442 | 1.10e-11 | 66.6 |
MS.gene00429.t1 | AT5G36220 | 23.423 | 222 | 162 | 5 | 146 | 365 | 253 | 468 | 1.15e-11 | 66.6 |
MS.gene00429.t1 | AT5G36220 | 23.423 | 222 | 162 | 5 | 146 | 365 | 107 | 322 | 1.17e-11 | 66.2 |
MS.gene00429.t1 | AT3G26290 | 26.238 | 202 | 135 | 6 | 148 | 339 | 258 | 455 | 1.36e-11 | 66.6 |
MS.gene00429.t1 | AT3G53300 | 24.359 | 234 | 156 | 7 | 120 | 343 | 225 | 447 | 1.57e-11 | 66.2 |
MS.gene00429.t1 | AT2G45570 | 26.068 | 234 | 141 | 9 | 146 | 358 | 250 | 472 | 3.61e-11 | 65.1 |
MS.gene00429.t1 | AT1G75130 | 22.992 | 361 | 235 | 14 | 48 | 380 | 150 | 495 | 5.01e-11 | 64.7 |
Find 87 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAATGGCATGAAAGTATT+TGG | 0.142965 | 1.4:+3795511 | None:intergenic |
GGCATTGCTTTCCACCCTTT+TGG | 0.171251 | 1.4:+3795710 | None:intergenic |
AGGGCTAAGGCTTCAATTTC+AGG | 0.177274 | 1.4:+3797675 | None:intergenic |
GCTTATACCTTATAGGTAAT+TGG | 0.207342 | 1.4:+3796200 | None:intergenic |
ATTAACTGCTTATACCTTAT+AGG | 0.209223 | 1.4:+3796193 | None:intergenic |
AAGAGCTAAAGAAGAATTAT+TGG | 0.218720 | 1.4:-3797194 | MS.gene00429:CDS |
CCAAATGATGGATCATAATA+AGG | 0.218766 | 1.4:+3795440 | None:intergenic |
TCAGCTACTGCTTCTCTAAA+TGG | 0.254249 | 1.4:+3795966 | None:intergenic |
GAAATTGGAGATAACATTAT+TGG | 0.259111 | 1.4:-3796883 | MS.gene00429:CDS |
ATATTATCTGATGATGAAAT+TGG | 0.294172 | 1.4:-3796898 | MS.gene00429:CDS |
CCCTTTCCACCATCAAATCT+TGG | 0.312974 | 1.4:-3797656 | MS.gene00429:CDS |
ATGGTAAACTACAGCTGAAT+TGG | 0.316888 | 1.4:-3796241 | MS.gene00429:CDS |
CCTTATTATGATCCATCATT+TGG | 0.343940 | 1.4:-3795440 | MS.gene00429:CDS |
AAACATGCCAATTACCTATA+AGG | 0.352173 | 1.4:-3796207 | MS.gene00429:intron |
GGCATGAAAGTATTTGGTTT+TGG | 0.356492 | 1.4:+3795517 | None:intergenic |
CCAAATACTTTCATGCCATT+TGG | 0.359912 | 1.4:-3795511 | MS.gene00429:CDS |
CCATTCAAAGGCAATGGAAA+TGG | 0.361111 | 1.4:+3794843 | None:intergenic |
CCTTTCCACCATCAAATCTT+GGG | 0.366162 | 1.4:-3797655 | MS.gene00429:CDS |
ATCATTTGGTCGTCAAGTTT+AGG | 0.368718 | 1.4:-3795426 | MS.gene00429:intron |
CTTGAAGGGTTGAATTTATG+AGG | 0.372482 | 1.4:+3795644 | None:intergenic |
CCTCGATTCACTTCGCAACT+TGG | 0.379709 | 1.4:-3797700 | MS.gene00429:CDS |
TCATTTCCAACTCAAATTCC+TGG | 0.382346 | 1.4:-3797150 | MS.gene00429:CDS |
CCATTTCCATTGCCTTTGAA+TGG | 0.384022 | 1.4:-3794843 | MS.gene00429:CDS |
TCACACTGTGGGATTCAATA+TGG | 0.388946 | 1.4:-3794867 | MS.gene00429:CDS |
TTTACACATTCGAGAAGTTT+CGG | 0.400562 | 1.4:+3796790 | None:intergenic |
ATTCAACCCTTCAAGATTTG+AGG | 0.401761 | 1.4:-3795636 | MS.gene00429:intron |
AAAAGCAAAGAACGTTTGAT+TGG | 0.407013 | 1.4:-3797795 | MS.gene00429:CDS |
CTTTGAATGGACTCCCAGCC+AGG | 0.412377 | 1.4:-3794830 | MS.gene00429:intron |
TGGCAATGAGCTTGCTAAGC+TGG | 0.415341 | 1.4:-3795467 | MS.gene00429:CDS |
GGAAATAATTAGTGAGAGGA+AGG | 0.418556 | 1.4:-3796992 | MS.gene00429:CDS |
ATTCATACCTCAAATCTTGA+AGG | 0.422368 | 1.4:+3795629 | None:intergenic |
ATCATCACCCCAAGATTTGA+TGG | 0.427411 | 1.4:+3797647 | None:intergenic |
GTGAGTACCATTTGCGTTTG+AGG | 0.428828 | 1.4:-3797746 | MS.gene00429:CDS |
TTTAGCTCTTCCCTCAACCT+TGG | 0.449838 | 1.4:+3797207 | None:intergenic |
CAAATGATGGATCATAATAA+GGG | 0.450882 | 1.4:+3795441 | None:intergenic |
GATTCTCTCCAACACCTGGC+TGG | 0.454938 | 1.4:+3794816 | None:intergenic |
GGGTTGAATTTATGAGGCTC+TGG | 0.474079 | 1.4:+3795650 | None:intergenic |
CCAGGATTCCTAATCCCAAA+AGG | 0.474118 | 1.4:-3795725 | MS.gene00429:intron |
CATTCAAAGGCAATGGAAAT+GGG | 0.474896 | 1.4:+3794844 | None:intergenic |
TGTGTACCAGGAATTTGAGT+TGG | 0.476181 | 1.4:+3797144 | None:intergenic |
CCAAGATTTGATGGTGGAAA+GGG | 0.481164 | 1.4:+3797656 | None:intergenic |
AACACAAAACGTGCAGCTTC+AGG | 0.483985 | 1.4:+3797855 | None:intergenic |
ATCAAATCTTGGGGTGATGA+TGG | 0.495039 | 1.4:-3797645 | MS.gene00429:CDS |
ACTTTCATGCCATTTGGTAG+TGG | 0.497443 | 1.4:-3795505 | MS.gene00429:CDS |
AGCTGTTTCTTGAATTGGAA+AGG | 0.501218 | 1.4:-3796934 | MS.gene00429:CDS |
GCAATCTAGAGCCAAGGTTG+AGG | 0.509932 | 1.4:-3797218 | MS.gene00429:CDS |
AGCTTAGCAAGCTCATTGCC+AGG | 0.510940 | 1.4:+3795469 | None:intergenic |
TAAGCTTCCTCAAACGCAAA+TGG | 0.513067 | 1.4:+3797739 | None:intergenic |
TAAACTTGACGACCAAATGA+TGG | 0.513374 | 1.4:+3795428 | None:intergenic |
TTGAATTGGAAAGGAGAAGG+AGG | 0.514480 | 1.4:-3796925 | MS.gene00429:CDS |
CAATCTAGAGCCAAGGTTGA+GGG | 0.517826 | 1.4:-3797217 | MS.gene00429:CDS |
ATTCTCTCCAACACCTGGCT+GGG | 0.529923 | 1.4:+3794817 | None:intergenic |
CCCAAGATTTGATGGTGGAA+AGG | 0.538660 | 1.4:+3797655 | None:intergenic |
TTCTTGAATTGGAAAGGAGA+AGG | 0.539562 | 1.4:-3796928 | MS.gene00429:CDS |
TTTGATGGTGGAAAGGGCTA+AGG | 0.541061 | 1.4:+3797662 | None:intergenic |
GCAAATGGTACTCACCTTGG+TGG | 0.541284 | 1.4:+3797754 | None:intergenic |
GTGAAGGCAAGAGAGAAACT+TGG | 0.544371 | 1.4:-3797027 | MS.gene00429:intron |
GGGAGTCCATTCAAAGGCAA+TGG | 0.544618 | 1.4:+3794837 | None:intergenic |
TGCTTTGTAGGCTGAGCAGA+AGG | 0.545509 | 1.4:-3796282 | MS.gene00429:intron |
TGAAGGAAATAATTAGTGAG+AGG | 0.545555 | 1.4:-3796996 | MS.gene00429:CDS |
TTTGGTATATAGGTTGGAAG+TGG | 0.546819 | 1.4:-3794895 | MS.gene00429:intron |
CCACAGCTACTGTCATGACA+TGG | 0.547135 | 1.4:-3796837 | MS.gene00429:CDS |
GCAATTCACAAGGAAAATGA+TGG | 0.548553 | 1.4:-3796260 | MS.gene00429:CDS |
GCATGTACTCCACTACCAAA+TGG | 0.553843 | 1.4:+3795496 | None:intergenic |
GAAACTTCTCGAATGTGTAA+AGG | 0.561471 | 1.4:-3796788 | MS.gene00429:intron |
TTCATACCTCAAATCTTGAA+GGG | 0.564125 | 1.4:+3795630 | None:intergenic |
AACGCAAATGGTACTCACCT+TGG | 0.565917 | 1.4:+3797751 | None:intergenic |
AATTATTGGATTGTTGACAA+TGG | 0.572734 | 1.4:-3797180 | MS.gene00429:CDS |
CAGGATTCCTAATCCCAAAA+GGG | 0.575886 | 1.4:-3795724 | MS.gene00429:CDS |
TATCCTACAAAATCCCATGC+AGG | 0.583588 | 1.4:-3794626 | MS.gene00429:CDS |
GTATATAGGTTGGAAGTGGT+AGG | 0.592193 | 1.4:-3794891 | MS.gene00429:intron |
CAAGTTGCGAAGTGAATCGA+GGG | 0.600200 | 1.4:+3797701 | None:intergenic |
TGTGTTGGAGAGCATGAGAA+TGG | 0.607491 | 1.4:-3796006 | MS.gene00429:CDS |
CTTTCCACCATCAAATCTTG+GGG | 0.609532 | 1.4:-3797654 | MS.gene00429:CDS |
TGATGAATATTTCTGAACAG+TGG | 0.615557 | 1.4:+3795689 | None:intergenic |
AGTGGAGTACATGCTTGTCC+TGG | 0.616452 | 1.4:-3795487 | MS.gene00429:CDS |
CCAAGTTGCGAAGTGAATCG+AGG | 0.629437 | 1.4:+3797700 | None:intergenic |
CTGGCTGGGAGTCCATTCAA+AGG | 0.643521 | 1.4:+3794831 | None:intergenic |
GATTCCTAATCCCAAAAGGG+TGG | 0.645660 | 1.4:-3795721 | MS.gene00429:CDS |
CCATGTCATGACAGTAGCTG+TGG | 0.646176 | 1.4:+3796837 | None:intergenic |
TGAGCAGAAGGCAATTCACA+AGG | 0.649363 | 1.4:-3796270 | MS.gene00429:CDS |
GTTTGAGGAAGCTTATTCAG+AGG | 0.650161 | 1.4:-3797731 | MS.gene00429:CDS |
CACAGCTACTGTCATGACAT+GGG | 0.650868 | 1.4:-3796836 | MS.gene00429:CDS |
AAGTGGTAGGATCACACTGT+GGG | 0.657629 | 1.4:-3794878 | MS.gene00429:CDS |
GTAGCTGATGTAGAGTACAA+AGG | 0.662288 | 1.4:-3795951 | MS.gene00429:intron |
ATCACCCCAAGATTTGATGG+TGG | 0.682987 | 1.4:+3797650 | None:intergenic |
GAAGTGGTAGGATCACACTG+TGG | 0.723901 | 1.4:-3794879 | MS.gene00429:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAAAAGATTAATTTA+TGG | + | chr1.4:3797772-3797791 | None:intergenic | 10.0% |
!! | CATTTAATTAAAAAAATGTA+TGG | + | chr1.4:3797423-3797442 | None:intergenic | 10.0% |
!!! | ATTTAACTTAGTTTAATTTT+TGG | - | chr1.4:3795744-3795763 | MS.gene00429:intron | 10.0% |
!! | AATAAAATGTTAGAAACAAA+AGG | - | chr1.4:3797163-3797182 | MS.gene00429:CDS | 15.0% |
!! | ATAATAATCAATTCAATCAT+TGG | + | chr1.4:3795070-3795089 | None:intergenic | 15.0% |
!!! | AACTATGTAATTTTTTTCAT+AGG | - | chr1.4:3797810-3797829 | MS.gene00429:CDS | 15.0% |
!!! | AATAAATGAATTTTTGCATT+TGG | + | chr1.4:3797386-3797405 | None:intergenic | 15.0% |
!!! | CATTTGGTTTATTATTTATA+AGG | + | chr1.4:3797370-3797389 | None:intergenic | 15.0% |
!!! | CTAAAAAATCTTTTATCATA+TGG | + | chr1.4:3796136-3796155 | None:intergenic | 15.0% |
!! | AAAAGATTAATTTATGGCTA+TGG | + | chr1.4:3797766-3797785 | None:intergenic | 20.0% |
!! | TAATAAACACAACAAGAATA+AGG | + | chr1.4:3796418-3796437 | None:intergenic | 20.0% |
!! | TATGAATGAGTCAATTATAA+TGG | - | chr1.4:3796871-3796890 | MS.gene00429:CDS | 20.0% |
!! | TCAATTATAATGGTAATACA+TGG | - | chr1.4:3796881-3796900 | MS.gene00429:CDS | 20.0% |
!! | TTAAATGCACAAATTCATTT+AGG | - | chr1.4:3797436-3797455 | MS.gene00429:intron | 20.0% |
!! | TTTAAGGAAATGAAAAAAGT+AGG | - | chr1.4:3794878-3794897 | MS.gene00429:CDS | 20.0% |
!!! | AAAATGGGAAATTTTTTCTA+GGG | - | chr1.4:3796591-3796610 | MS.gene00429:intron | 20.0% |
!!! | AATCTAAGAATTGAATTTTG+TGG | - | chr1.4:3796443-3796462 | MS.gene00429:intron | 20.0% |
!!! | ATATTATCTGATGATGAAAT+TGG | - | chr1.4:3795586-3795605 | MS.gene00429:intron | 20.0% |
!!! | ATGCATAATTAACACTTTTA+AGG | - | chr1.4:3794862-3794881 | MS.gene00429:CDS | 20.0% |
!!! | ATGTAATTTTTTTCATAGGT+GGG | - | chr1.4:3797814-3797833 | MS.gene00429:CDS | 20.0% |
!!! | ATTTTGTTATTTGTTGATAC+AGG | - | chr1.4:3796939-3796958 | MS.gene00429:CDS | 20.0% |
!!! | TAACTTAGTTTAATTTTTGG+TGG | - | chr1.4:3795747-3795766 | MS.gene00429:intron | 20.0% |
!!! | TATGTAATTTTTTTCATAGG+TGG | - | chr1.4:3797813-3797832 | MS.gene00429:CDS | 20.0% |
!!! | TTTACTAAATTGTTGTTATG+TGG | - | chr1.4:3795143-3795162 | MS.gene00429:intron | 20.0% |
!!! | TTTTACTATACTTTTTGTGA+AGG | - | chr1.4:3795441-3795460 | MS.gene00429:CDS | 20.0% |
!!! | TTTTTTTAAATACCAATCCA+TGG | - | chr1.4:3796106-3796125 | MS.gene00429:intron | 20.0% |
! | AAGAGCTAAAGAAGAATTAT+TGG | - | chr1.4:3795290-3795309 | MS.gene00429:intron | 25.0% |
! | AATAAAAAGAGATCAACGAA+TGG | - | chr1.4:3797120-3797139 | MS.gene00429:intron | 25.0% |
! | AATTATTGGATTGTTGACAA+TGG | - | chr1.4:3795304-3795323 | MS.gene00429:intron | 25.0% |
! | AGAGATATTTGATCAGTTAT+TGG | + | chr1.4:3797518-3797537 | None:intergenic | 25.0% |
! | AGGGTCAATAATTAATTAAG+TGG | - | chr1.4:3795188-3795207 | MS.gene00429:intron | 25.0% |
! | ATAATGGTAATACATGGTTA+AGG | - | chr1.4:3796887-3796906 | MS.gene00429:CDS | 25.0% |
! | ATGCTAGAAAAAGATTCATT+GGG | - | chr1.4:3797698-3797717 | MS.gene00429:CDS | 25.0% |
! | ATTAACTGCTTATACCTTAT+AGG | + | chr1.4:3796294-3796313 | None:intergenic | 25.0% |
! | GAAATTGGAGATAACATTAT+TGG | - | chr1.4:3795601-3795620 | MS.gene00429:intron | 25.0% |
! | TTCAGCATAGTATAATAGTA+TGG | + | chr1.4:3796656-3796675 | None:intergenic | 25.0% |
!! | AAAATGAACGTTTTTCACAT+TGG | + | chr1.4:3796684-3796703 | None:intergenic | 25.0% |
!! | AAATGAACGTTTTTCACATT+GGG | + | chr1.4:3796683-3796702 | None:intergenic | 25.0% |
!! | AATTTAAAATCACGCGATAT+AGG | + | chr1.4:3794946-3794965 | None:intergenic | 25.0% |
!! | ATTTTATAACAAGTGCTCTT+AGG | + | chr1.4:3797257-3797276 | None:intergenic | 25.0% |
!! | CAATTTAAAACCACAATGAT+TGG | - | chr1.4:3795043-3795062 | MS.gene00429:intron | 25.0% |
!! | TATGTGAAAGATTTTGCTTT+TGG | - | chr1.4:3797571-3797590 | MS.gene00429:intron | 25.0% |
!! | TGAATTTTGTGGAATTTTTC+AGG | - | chr1.4:3796454-3796473 | MS.gene00429:intron | 25.0% |
!! | TTCTGGCATTAATTTTTGTA+TGG | - | chr1.4:3795119-3795138 | MS.gene00429:intron | 25.0% |
!!! | AGATTTTGCTTTTGGTATAT+AGG | - | chr1.4:3797579-3797598 | MS.gene00429:intron | 25.0% |
!!! | ATTTGCAAAAGCATTCAAAA+TGG | - | chr1.4:3796575-3796594 | MS.gene00429:intron | 25.0% |
!!! | CAAAATGGGAAATTTTTTCT+AGG | - | chr1.4:3796590-3796609 | MS.gene00429:intron | 25.0% |
!!! | CAAATGATGGATCATAATAA+GGG | + | chr1.4:3797046-3797065 | None:intergenic | 25.0% |
!!! | TCAAACTTTGTTATTAGTCT+CGG | - | chr1.4:3796347-3796366 | MS.gene00429:intron | 25.0% |
!!! | TTAATTTTTGGTGGTTTCTA+CGG | - | chr1.4:3795756-3795775 | MS.gene00429:intron | 25.0% |
!!! | TTTGCAAAAGCATTCAAAAT+GGG | - | chr1.4:3796576-3796595 | MS.gene00429:intron | 25.0% |
AAAAGCAAAGAACGTTTGAT+TGG | - | chr1.4:3794689-3794708 | MS.gene00429:intron | 30.0% | |
AAACATGCCAATTACCTATA+AGG | - | chr1.4:3796277-3796296 | MS.gene00429:intron | 30.0% | |
AAACTGCAAAAGATCAAAGA+TGG | + | chr1.4:3795215-3795234 | None:intergenic | 30.0% | |
AACAAAAGGAGATCAATGAA+TGG | - | chr1.4:3797177-3797196 | MS.gene00429:CDS | 30.0% | |
ACATGAGAATATTATGAACC+AGG | - | chr1.4:3796741-3796760 | MS.gene00429:intron | 30.0% | |
ACTTGAATCACATTTGAGTA+AGG | + | chr1.4:3795014-3795033 | None:intergenic | 30.0% | |
ATTCATACCTCAAATCTTGA+AGG | + | chr1.4:3796858-3796877 | None:intergenic | 30.0% | |
CATGCTAGAAAAAGATTCAT+TGG | - | chr1.4:3797697-3797716 | MS.gene00429:CDS | 30.0% | |
CCTTATTATGATCCATCATT+TGG | - | chr1.4:3797044-3797063 | MS.gene00429:intron | 30.0% | |
GCTTATACCTTATAGGTAAT+TGG | + | chr1.4:3796287-3796306 | None:intergenic | 30.0% | |
TAATTTATGGCTATGGAAAG+TGG | + | chr1.4:3797759-3797778 | None:intergenic | 30.0% | |
TCAAGTGACACTATAATTTG+TGG | - | chr1.4:3796172-3796191 | MS.gene00429:intron | 30.0% | |
TGAAGGAAATAATTAGTGAG+AGG | - | chr1.4:3795488-3795507 | MS.gene00429:CDS | 30.0% | |
TGAGAACTTCTACTTATGTA+TGG | - | chr1.4:3796052-3796071 | MS.gene00429:intron | 30.0% | |
TGCTAGAAAAAGATTCATTG+GGG | - | chr1.4:3797699-3797718 | MS.gene00429:CDS | 30.0% | |
TTCATACCTCAAATCTTGAA+GGG | + | chr1.4:3796857-3796876 | None:intergenic | 30.0% | |
TTTACACATTCGAGAAGTTT+CGG | + | chr1.4:3795697-3795716 | None:intergenic | 30.0% | |
! | ATATTGAAGTGTCACATTTC+TGG | - | chr1.4:3795102-3795121 | MS.gene00429:intron | 30.0% |
! | GTTGGTATTCTCAAAGTTTT+TGG | - | chr1.4:3795244-3795263 | MS.gene00429:intron | 30.0% |
! | TATCGCGTGATTTTAAATTG+CGG | - | chr1.4:3794947-3794966 | MS.gene00429:intron | 30.0% |
! | TGATGAATATTTCTGAACAG+TGG | + | chr1.4:3796798-3796817 | None:intergenic | 30.0% |
! | TTTCTTTTTCTTCCTTAGAG+TGG | - | chr1.4:3797333-3797352 | MS.gene00429:intron | 30.0% |
! | TTTGAGTGAACTTTAACTTC+TGG | + | chr1.4:3795813-3795832 | None:intergenic | 30.0% |
! | TTTTAAATACCAATCCATGG+TGG | - | chr1.4:3796109-3796128 | MS.gene00429:intron | 30.0% |
!! | ACAATACAAAAAAGCACTCT+TGG | - | chr1.4:3795360-3795379 | MS.gene00429:intron | 30.0% |
!! | ATCAAACGTTCTTTGCTTTT+AGG | + | chr1.4:3794689-3794708 | None:intergenic | 30.0% |
!! | CCAAATGATGGATCATAATA+AGG | + | chr1.4:3797047-3797066 | None:intergenic | 30.0% |
!! | TTTGCTTTTGGTATATAGGT+TGG | - | chr1.4:3797583-3797602 | MS.gene00429:intron | 30.0% |
!!! | GAAACTTGGAAGTATTTTGA+AGG | - | chr1.4:3795471-3795490 | MS.gene00429:CDS | 30.0% |
!!! | TCTTTGCTTTTAGGATATGT+TGG | + | chr1.4:3794680-3794699 | None:intergenic | 30.0% |
!!! | TTCGTTTTTTACTGTTGAGT+CGG | - | chr1.4:3795884-3795903 | MS.gene00429:intron | 30.0% |
!!! | TTGCAGTTTTCTTTTGAAGT+TGG | - | chr1.4:3795226-3795245 | MS.gene00429:intron | 30.0% |
!!! | TTTTGAGCTGTTTCTTGAAT+TGG | - | chr1.4:3795545-3795564 | MS.gene00429:intron | 30.0% |
AATCATTGGTCCAATCATTG+TGG | + | chr1.4:3795056-3795075 | None:intergenic | 35.0% | |
ATAGCTGTGACATTACATAG+TGG | + | chr1.4:3796626-3796645 | None:intergenic | 35.0% | |
ATCATTTGGTCGTCAAGTTT+AGG | - | chr1.4:3797058-3797077 | MS.gene00429:intron | 35.0% | |
ATGGTAAACTACAGCTGAAT+TGG | - | chr1.4:3796243-3796262 | MS.gene00429:CDS | 35.0% | |
ATTCAACCCTTCAAGATTTG+AGG | - | chr1.4:3796848-3796867 | MS.gene00429:CDS | 35.0% | |
CATTCAAAGGCAATGGAAAT+GGG | + | chr1.4:3797643-3797662 | None:intergenic | 35.0% | |
CCAAATACTTTCATGCCATT+TGG | - | chr1.4:3796973-3796992 | MS.gene00429:CDS | 35.0% | |
CTCAACAGTAAAAAACGAAG+AGG | + | chr1.4:3795883-3795902 | None:intergenic | 35.0% | |
CTTGAAGGGTTGAATTTATG+AGG | + | chr1.4:3796843-3796862 | None:intergenic | 35.0% | |
GAAACTTCTCGAATGTGTAA+AGG | - | chr1.4:3795696-3795715 | MS.gene00429:CDS | 35.0% | |
GCAATTCACAAGGAAAATGA+TGG | - | chr1.4:3796224-3796243 | MS.gene00429:CDS | 35.0% | |
GGAAATAATTAGTGAGAGGA+AGG | - | chr1.4:3795492-3795511 | MS.gene00429:CDS | 35.0% | |
GTATATAGTTGTCCACTCTA+AGG | + | chr1.4:3797348-3797367 | None:intergenic | 35.0% | |
GTGATGTGTGGAACAATAAA+GGG | - | chr1.4:3795169-3795188 | MS.gene00429:intron | 35.0% | |
TAAACTTGACGACCAAATGA+TGG | + | chr1.4:3797059-3797078 | None:intergenic | 35.0% | |
TCATTTCCAACTCAAATTCC+TGG | - | chr1.4:3795334-3795353 | MS.gene00429:intron | 35.0% | |
TGTGATGTGTGGAACAATAA+AGG | - | chr1.4:3795168-3795187 | MS.gene00429:intron | 35.0% | |
TGTTGAGTCGGTAATCTAAT+TGG | - | chr1.4:3795896-3795915 | MS.gene00429:intron | 35.0% | |
TTCTTGAATTGGAAAGGAGA+AGG | - | chr1.4:3795556-3795575 | MS.gene00429:intron | 35.0% | |
! | ATGGGATTTTGTAGGATAGA+GGG | + | chr1.4:3797856-3797875 | None:intergenic | 35.0% |
! | CGAATATGTGTTGAGTTTTG+AGG | - | chr1.4:3795949-3795968 | MS.gene00429:intron | 35.0% |
! | TTTGGTATATAGGTTGGAAG+TGG | - | chr1.4:3797589-3797608 | MS.gene00429:intron | 35.0% |
! | TTTTATCATATGGTCCACCA+TGG | + | chr1.4:3796126-3796145 | None:intergenic | 35.0% |
!! | AGCTGTTTCTTGAATTGGAA+AGG | - | chr1.4:3795550-3795569 | MS.gene00429:intron | 35.0% |
!! | CCAAATGGCATGAAAGTATT+TGG | + | chr1.4:3796976-3796995 | None:intergenic | 35.0% |
!! | TGAATCTTTTTCTAGCATGC+TGG | + | chr1.4:3797696-3797715 | None:intergenic | 35.0% |
!!! | GCTTTTTTGTATTGTGTACC+AGG | + | chr1.4:3795355-3795374 | None:intergenic | 35.0% |
!!! | GGCATGAAAGTATTTGGTTT+TGG | + | chr1.4:3796970-3796989 | None:intergenic | 35.0% |
!!! | TGGAATTTTTCAGGTTGTGT+TGG | - | chr1.4:3796463-3796482 | MS.gene00429:intron | 35.0% |
ATCAAATCTTGGGGTGATGA+TGG | - | chr1.4:3794839-3794858 | MS.gene00429:CDS | 40.0% | |
ATCATCACCCCAAGATTTGA+TGG | + | chr1.4:3794840-3794859 | None:intergenic | 40.0% | |
CAGGATTCCTAATCCCAAAA+GGG | - | chr1.4:3796760-3796779 | MS.gene00429:intron | 40.0% | |
CCATTCAAAGGCAATGGAAA+TGG | + | chr1.4:3797644-3797663 | None:intergenic | 40.0% | |
CCATTTCCATTGCCTTTGAA+TGG | - | chr1.4:3797641-3797660 | MS.gene00429:CDS | 40.0% | |
CCTTTCCACCATCAAATCTT+GGG | - | chr1.4:3794829-3794848 | MS.gene00429:intron | 40.0% | |
CTCAATTCTCTTCGTCTTCA+TGG | + | chr1.4:3796036-3796055 | None:intergenic | 40.0% | |
CTTTCCACCATCAAATCTTG+GGG | - | chr1.4:3794830-3794849 | MS.gene00429:intron | 40.0% | |
GTAGCTGATGTAGAGTACAA+AGG | - | chr1.4:3796533-3796552 | MS.gene00429:intron | 40.0% | |
GTTATGTGGAATGTGATGTG+TGG | - | chr1.4:3795157-3795176 | MS.gene00429:intron | 40.0% | |
GTTTGAGGAAGCTTATTCAG+AGG | - | chr1.4:3794753-3794772 | MS.gene00429:intron | 40.0% | |
TAAGCTTCCTCAAACGCAAA+TGG | + | chr1.4:3794748-3794767 | None:intergenic | 40.0% | |
TATCCTACAAAATCCCATGC+AGG | - | chr1.4:3797858-3797877 | MS.gene00429:CDS | 40.0% | |
TCACACTGTGGGATTCAATA+TGG | - | chr1.4:3797617-3797636 | MS.gene00429:CDS | 40.0% | |
TCAGCTACTGCTTCTCTAAA+TGG | + | chr1.4:3796521-3796540 | None:intergenic | 40.0% | |
TGGTGGAAAAACAAAGCACA+AGG | + | chr1.4:3794716-3794735 | None:intergenic | 40.0% | |
TGTGTACCAGGAATTTGAGT+TGG | + | chr1.4:3795343-3795362 | None:intergenic | 40.0% | |
TTGAATTGGAAAGGAGAAGG+AGG | - | chr1.4:3795559-3795578 | MS.gene00429:intron | 40.0% | |
! | ACTTTCATGCCATTTGGTAG+TGG | - | chr1.4:3796979-3796998 | MS.gene00429:CDS | 40.0% |
! | CATGGGATTTTGTAGGATAG+AGG | + | chr1.4:3797857-3797876 | None:intergenic | 40.0% |
! | GTATATAGGTTGGAAGTGGT+AGG | - | chr1.4:3797593-3797612 | MS.gene00429:intron | 40.0% |
! | TGGGATTTTGTAGGATAGAG+GGG | + | chr1.4:3797855-3797874 | None:intergenic | 40.0% |
! | TGTGGTAATGCTTGCTTTGT+AGG | - | chr1.4:3796190-3796209 | MS.gene00429:intron | 40.0% |
!! | CCAAGATTTGATGGTGGAAA+GGG | + | chr1.4:3794831-3794850 | None:intergenic | 40.0% |
!! | GACACTGACTTCATTGATGT+CGG | + | chr1.4:3796009-3796028 | None:intergenic | 40.0% |
!! | TGAGGCTCTGGAAAAAATTC+AGG | + | chr1.4:3796825-3796844 | None:intergenic | 40.0% |
!! | TTTTTGGCAATCTAGAGCCA+AGG | - | chr1.4:3795260-3795279 | MS.gene00429:intron | 40.0% |
!!! | ATTTTTGGTGGTTTCTACGG+TGG | - | chr1.4:3795759-3795778 | MS.gene00429:intron | 40.0% |
!!! | TGTGCTTTGTTTTTCCACCA+AGG | - | chr1.4:3794716-3794735 | MS.gene00429:intron | 40.0% |
AACACAAAACGTGCAGCTTC+AGG | + | chr1.4:3794632-3794651 | None:intergenic | 45.0% | |
AACGCAAATGGTACTCACCT+TGG | + | chr1.4:3794736-3794755 | None:intergenic | 45.0% | |
AAGTGGTAGGATCACACTGT+GGG | - | chr1.4:3797606-3797625 | MS.gene00429:intron | 45.0% | |
AATTGCGGCTGTAGTCACAT+TGG | - | chr1.4:3794962-3794981 | MS.gene00429:intron | 45.0% | |
AGGGCTAAGGCTTCAATTTC+AGG | + | chr1.4:3794812-3794831 | None:intergenic | 45.0% | |
ATCACCCCAAGATTTGATGG+TGG | + | chr1.4:3794837-3794856 | None:intergenic | 45.0% | |
CAAGTTGCGAAGTGAATCGA+GGG | + | chr1.4:3794786-3794805 | None:intergenic | 45.0% | |
CACAGCTACTGTCATGACAT+GGG | - | chr1.4:3795648-3795667 | MS.gene00429:CDS | 45.0% | |
CCAGGATTCCTAATCCCAAA+AGG | - | chr1.4:3796759-3796778 | MS.gene00429:intron | 45.0% | |
CCCTTTCCACCATCAAATCT+TGG | - | chr1.4:3794828-3794847 | MS.gene00429:intron | 45.0% | |
GATTCCTAATCCCAAAAGGG+TGG | - | chr1.4:3796763-3796782 | MS.gene00429:intron | 45.0% | |
GCATGTACTCCACTACCAAA+TGG | + | chr1.4:3796991-3797010 | None:intergenic | 45.0% | |
GGGTTGAATTTATGAGGCTC+TGG | + | chr1.4:3796837-3796856 | None:intergenic | 45.0% | |
GTGAAGGCAAGAGAGAAACT+TGG | - | chr1.4:3795457-3795476 | MS.gene00429:CDS | 45.0% | |
GTGAGTACCATTTGCGTTTG+AGG | - | chr1.4:3794738-3794757 | MS.gene00429:intron | 45.0% | |
TCATATGGTCCACCATGGAT+TGG | + | chr1.4:3796121-3796140 | None:intergenic | 45.0% | |
TGAGCAGAAGGCAATTCACA+AGG | - | chr1.4:3796214-3796233 | MS.gene00429:CDS | 45.0% | |
TTAGTCTCGGCATTTATGCG+CGG | - | chr1.4:3796360-3796379 | MS.gene00429:intron | 45.0% | |
! | CAATCTAGAGCCAAGGTTGA+GGG | - | chr1.4:3795267-3795286 | MS.gene00429:intron | 45.0% |
! | GCATTGCTTTCCACCCTTTT+GGG | + | chr1.4:3796776-3796795 | None:intergenic | 45.0% |
! | GGGATTTTGTAGGATAGAGG+GGG | + | chr1.4:3797854-3797873 | None:intergenic | 45.0% |
! | TGAAGCTGCACGTTTTGTGT+TGG | - | chr1.4:3794631-3794650 | MS.gene00429:CDS | 45.0% |
! | TGTGTTGGAGAGCATGAGAA+TGG | - | chr1.4:3796478-3796497 | MS.gene00429:intron | 45.0% |
!! | CCCAAGATTTGATGGTGGAA+AGG | + | chr1.4:3794832-3794851 | None:intergenic | 45.0% |
!! | CTACGGTGGATTGCTTTGAT+AGG | - | chr1.4:3795773-3795792 | MS.gene00429:intron | 45.0% |
!! | TTTAGCTCTTCCCTCAACCT+TGG | + | chr1.4:3795280-3795299 | None:intergenic | 45.0% |
!! | TTTGATGGTGGAAAGGGCTA+AGG | + | chr1.4:3794825-3794844 | None:intergenic | 45.0% |
!!! | CCTTTTGGGATTAGGAATCC+TGG | + | chr1.4:3796762-3796781 | None:intergenic | 45.0% |
!!! | CTTTCCACCCTTTTGGGATT+AGG | + | chr1.4:3796770-3796789 | None:intergenic | 45.0% |
AGCTTAGCAAGCTCATTGCC+AGG | + | chr1.4:3797018-3797037 | None:intergenic | 50.0% | |
AGTGGAGTACATGCTTGTCC+TGG | - | chr1.4:3796997-3797016 | MS.gene00429:CDS | 50.0% | |
ATTCTCTCCAACACCTGGCT+GGG | + | chr1.4:3797670-3797689 | None:intergenic | 50.0% | |
CCAAGTTGCGAAGTGAATCG+AGG | + | chr1.4:3794787-3794806 | None:intergenic | 50.0% | |
CCACAGCTACTGTCATGACA+TGG | - | chr1.4:3795647-3795666 | MS.gene00429:CDS | 50.0% | |
CCATGTCATGACAGTAGCTG+TGG | + | chr1.4:3795650-3795669 | None:intergenic | 50.0% | |
CCTCGATTCACTTCGCAACT+TGG | - | chr1.4:3794784-3794803 | MS.gene00429:intron | 50.0% | |
GAAGTGGTAGGATCACACTG+TGG | - | chr1.4:3797605-3797624 | MS.gene00429:intron | 50.0% | |
GCAAATGGTACTCACCTTGG+TGG | + | chr1.4:3794733-3794752 | None:intergenic | 50.0% | |
GGGAGTCCATTCAAAGGCAA+TGG | + | chr1.4:3797650-3797669 | None:intergenic | 50.0% | |
GGTAGATTCTCTCCAACACC+TGG | + | chr1.4:3797675-3797694 | None:intergenic | 50.0% | |
TGCTTTGTAGGCTGAGCAGA+AGG | - | chr1.4:3796202-3796221 | MS.gene00429:intron | 50.0% | |
! | ACGCCTGCATGGGATTTTGT+AGG | + | chr1.4:3797864-3797883 | None:intergenic | 50.0% |
! | GCAATCTAGAGCCAAGGTTG+AGG | - | chr1.4:3795266-3795285 | MS.gene00429:intron | 50.0% |
! | GGCATTGCTTTCCACCCTTT+TGG | + | chr1.4:3796777-3796796 | None:intergenic | 50.0% |
!! | CGGTGGATTGCTTTGATAGG+TGG | - | chr1.4:3795776-3795795 | MS.gene00429:intron | 50.0% |
!! | TGGAGTGCTTTTTGCTGCTC+AGG | - | chr1.4:3795621-3795640 | MS.gene00429:intron | 50.0% |
!! | TGGCAATGAGCTTGCTAAGC+TGG | - | chr1.4:3797017-3797036 | MS.gene00429:CDS | 50.0% |
CTGGCTGGGAGTCCATTCAA+AGG | + | chr1.4:3797656-3797675 | None:intergenic | 55.0% | |
GATTCTCTCCAACACCTGGC+TGG | + | chr1.4:3797671-3797690 | None:intergenic | 55.0% | |
! | CTTTGAATGGACTCCCAGCC+AGG | - | chr1.4:3797654-3797673 | MS.gene00429:CDS | 55.0% |
ATGGACTCCCAGCCAGGTGT+TGG | - | chr1.4:3797660-3797679 | MS.gene00429:CDS | 60.0% | |
GTCTCGGCATTTATGCGCGG+AGG | - | chr1.4:3796363-3796382 | MS.gene00429:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 3794617 | 3797889 | 3794617 | ID=MS.gene00429 |
chr1.4 | mRNA | 3794617 | 3797889 | 3794617 | ID=MS.gene00429.t1;Parent=MS.gene00429 |
chr1.4 | exon | 3797611 | 3797889 | 3797611 | ID=MS.gene00429.t1.exon1;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3797611 | 3797889 | 3797611 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3797125 | 3797274 | 3797125 | ID=MS.gene00429.t1.exon2;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3797125 | 3797274 | 3797125 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3796789 | 3797043 | 3796789 | ID=MS.gene00429.t1.exon3;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3796789 | 3797043 | 3796789 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3796208 | 3796294 | 3796208 | ID=MS.gene00429.t1.exon4;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3796208 | 3796294 | 3796208 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3795952 | 3796030 | 3795952 | ID=MS.gene00429.t1.exon5;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3795952 | 3796030 | 3795952 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3795637 | 3795743 | 3795637 | ID=MS.gene00429.t1.exon6;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3795637 | 3795743 | 3795637 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3795427 | 3795545 | 3795427 | ID=MS.gene00429.t1.exon7;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3795427 | 3795545 | 3795427 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3794831 | 3794905 | 3794831 | ID=MS.gene00429.t1.exon8;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3794831 | 3794905 | 3794831 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
chr1.4 | exon | 3794617 | 3794674 | 3794617 | ID=MS.gene00429.t1.exon9;Parent=MS.gene00429.t1 |
chr1.4 | CDS | 3794617 | 3794674 | 3794617 | ID=cds.MS.gene00429.t1;Parent=MS.gene00429.t1 |
Gene Sequence |
Protein sequence |