AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49900.t1 MTR_7g016040 99.352 463 3 0 1 463 1 463 0.0 958
MS.gene49900.t1 MTR_6g015910 81.425 463 85 1 1 462 1 463 0.0 805
MS.gene49900.t1 MTR_3g007320 78.448 464 99 1 1 463 1 464 0.0 781
MS.gene49900.t1 MTR_7g016040 99.441 358 2 0 1 358 1 358 0.0 736
MS.gene49900.t1 MTR_3g070380 36.613 437 260 6 25 448 21 453 3.55e-101 311
MS.gene49900.t1 MTR_5g082520 35.731 431 262 7 29 448 24 450 1.19e-99 307
MS.gene49900.t1 MTR_8g016180 35.714 434 260 9 29 450 33 459 2.34e-94 293
MS.gene49900.t1 MTR_5g010750 31.983 469 308 7 3 461 1 468 5.04e-91 285
MS.gene49900.t1 MTR_8g077810 33.962 477 287 10 6 461 9 478 5.46e-89 280
MS.gene49900.t1 MTR_5g020020 35.189 449 269 9 33 463 36 480 5.23e-88 277
MS.gene49900.t1 MTR_8g076510 33.333 441 279 6 34 462 40 477 7.30e-87 274
MS.gene49900.t1 MTR_7g033040 33.550 462 289 7 7 456 8 463 1.87e-85 270
MS.gene49900.t1 MTR_5g021220 31.893 486 303 9 1 461 5 487 1.24e-84 268
MS.gene49900.t1 MTR_5g010750 32.280 443 289 7 3 435 1 442 1.81e-83 264
MS.gene49900.t1 MTR_8g072260 32.762 467 301 8 2 462 5 464 3.39e-83 264
MS.gene49900.t1 MTR_5g025610 34.339 431 271 7 33 458 35 458 2.82e-81 259
MS.gene49900.t1 MTR_8g016180 34.492 374 232 6 29 392 33 403 4.83e-79 251
MS.gene49900.t1 MTR_8g072260 32.802 439 283 7 2 435 5 436 1.07e-78 252
MS.gene49900.t1 MTR_5g025610 34.644 407 255 6 33 435 35 434 1.43e-78 251
MS.gene49900.t1 MTR_1g019410 30.388 464 312 8 4 460 7 466 4.37e-75 243
MS.gene49900.t1 MTR_4g086130 30.485 433 292 7 33 459 35 464 7.35e-74 240
MS.gene49900.t1 MTR_1g037580 31.317 463 307 7 4 461 18 474 5.17e-73 238
MS.gene49900.t1 MTR_8g089800 31.183 465 292 13 3 442 6 467 3.72e-72 236
MS.gene49900.t1 MTR_2g031920 30.851 470 294 10 3 447 7 470 7.27e-72 235
MS.gene49900.t1 MTR_6g069000 31.011 445 288 6 8 435 10 452 2.09e-70 230
MS.gene49900.t1 MTR_6g069000 31.011 445 288 6 8 435 20 462 3.09e-70 230
MS.gene49900.t1 MTR_2g031930 30.197 457 297 9 2 439 10 463 6.78e-69 228
MS.gene49900.t1 MTR_2g031930 30.243 453 294 9 2 435 6 455 1.19e-68 226
MS.gene49900.t1 MTR_8g072260 32.576 396 257 6 2 392 5 395 2.04e-68 225
MS.gene49900.t1 MTR_5g025610 34.341 364 230 5 33 392 35 393 3.79e-68 223
MS.gene49900.t1 MTR_4g086040 29.767 430 293 7 20 443 24 450 9.87e-66 219
MS.gene49900.t1 MTR_3g112120 30.330 455 291 9 8 442 13 461 1.33e-63 214
MS.gene49900.t1 MTR_0045s0060 28.747 487 306 14 2 461 3 475 2.22e-63 213
MS.gene49900.t1 MTR_5g014250 29.724 471 287 12 3 442 11 468 1.11e-62 211
MS.gene49900.t1 MTR_5g091760 29.487 468 295 12 19 461 18 475 8.44e-62 209
MS.gene49900.t1 MTR_0045s0070 28.689 488 305 15 2 461 3 475 1.33e-61 208
MS.gene49900.t1 MTR_6g034940 29.221 462 288 10 7 442 11 459 4.79e-61 207
MS.gene49900.t1 MTR_0045s0070 29.067 461 285 14 2 435 3 448 2.97e-59 201
MS.gene49900.t1 MTR_5g092150 28.989 445 298 8 31 460 27 468 8.36e-59 201
MS.gene49900.t1 MTR_8g100135 28.632 475 315 11 4 460 6 474 1.61e-58 200
MS.gene49900.t1 MTR_5g020020 32.448 339 212 8 138 463 72 406 8.75e-57 193
MS.gene49900.t1 MTR_0045s0060 28.856 402 268 10 68 461 2 393 3.78e-56 191
MS.gene49900.t1 MTR_5g014240 29.461 482 295 13 3 453 11 478 1.28e-55 192
MS.gene49900.t1 MTR_8g012970 27.601 471 296 17 1 442 10 464 2.63e-55 192
MS.gene49900.t1 MTR_4g005230 30.612 441 267 17 33 448 43 469 1.09e-54 190
MS.gene49900.t1 MTR_1g032950 27.313 454 286 12 14 442 18 452 6.31e-54 187
MS.gene49900.t1 MTR_3g467130 27.447 470 311 13 10 453 6 471 2.51e-51 181
MS.gene49900.t1 MTR_0045s0080 27.924 419 254 12 2 392 3 401 3.19e-50 176
MS.gene49900.t1 MTR_8g076940 27.358 424 294 6 23 436 37 456 1.24e-49 176
MS.gene49900.t1 MTR_3g467140 26.752 471 318 12 3 453 8 471 4.00e-48 172
MS.gene49900.t1 MTR_8g089190 24.889 450 307 10 33 460 1 441 6.13e-46 166
MS.gene49900.t1 MTR_8g076940 27.105 380 265 5 23 392 37 414 7.86e-42 154
MS.gene49900.t1 MTR_8g100135 27.034 381 256 9 4 367 6 381 1.04e-40 150
MS.gene49900.t1 MTR_8g076940 25.215 349 249 5 23 361 37 383 1.80e-30 122
MS.gene49900.t1 MTR_8g076940 25.434 346 246 5 23 358 37 380 2.32e-30 122
MS.gene49900.t1 MTR_1g492820 25.000 480 312 13 11 447 20 494 1.22e-28 119
MS.gene49900.t1 MTR_8g089190 22.753 356 245 9 33 367 1 347 1.95e-27 112
MS.gene49900.t1 MTR_3g467140 26.948 308 192 8 159 453 51 338 5.34e-25 105
MS.gene49900.t1 MTR_1g032980 25.076 327 214 8 25 328 8 326 1.96e-24 105
MS.gene49900.t1 MTR_5g007450 28.169 284 185 6 185 459 213 486 1.33e-23 103
MS.gene49900.t1 MTR_5g007550 30.093 216 142 5 227 437 253 464 2.87e-22 99.8
MS.gene49900.t1 MTR_1g037370 27.426 237 160 4 216 443 234 467 2.70e-21 96.7
MS.gene49900.t1 MTR_4g029690 25.753 299 187 11 27 302 37 323 6.47e-21 93.6
MS.gene49900.t1 MTR_3g057910 23.937 447 296 13 33 443 38 476 1.01e-20 95.1
MS.gene49900.t1 MTR_2g073440 26.104 249 169 6 217 453 218 463 2.57e-20 93.6
MS.gene49900.t1 MTR_3g076530 23.974 463 310 18 10 437 15 470 3.71e-20 93.6
MS.gene49900.t1 MTR_5g007460 27.354 223 149 5 225 437 224 443 4.05e-20 93.2
MS.gene49900.t1 MTR_2g073480 26.104 249 169 6 217 453 151 396 4.40e-20 92.4
MS.gene49900.t1 MTR_1g031700 23.493 481 309 16 4 443 8 470 4.68e-20 93.2
MS.gene49900.t1 MTR_4g089030 22.479 476 317 13 3 437 20 484 2.29e-19 90.9
MS.gene49900.t1 MTR_0171s0010 27.679 224 143 5 234 442 262 481 2.79e-19 90.9
MS.gene49900.t1 MTR_5g018980 23.947 451 286 16 33 437 34 473 3.19e-19 90.5
MS.gene49900.t1 MTR_5g094540 21.983 464 326 15 4 437 10 467 3.56e-19 90.5
MS.gene49900.t1 MTR_8g080520 22.573 443 300 14 28 436 62 495 6.09e-19 89.7
MS.gene49900.t1 MTR_1g035140 22.981 483 313 17 4 443 7 473 6.25e-19 89.7
MS.gene49900.t1 MTR_3g058110 21.941 474 330 13 7 443 8 478 7.45e-19 89.4
MS.gene49900.t1 MTR_4g088160 23.775 408 266 13 63 431 66 467 8.52e-19 89.4
MS.gene49900.t1 MTR_0171s0020 29.126 206 134 4 245 442 278 479 1.10e-18 89.0
MS.gene49900.t1 MTR_4g104610 23.382 479 309 15 13 444 8 475 1.34e-18 88.6
MS.gene49900.t1 MTR_8g008530 27.273 242 157 6 210 436 253 490 1.52e-18 88.6
MS.gene49900.t1 MTR_5g021390 24.521 261 164 6 208 443 234 486 1.88e-18 88.2
MS.gene49900.t1 MTR_7g012860 26.749 243 163 5 210 441 233 471 1.93e-18 88.2
MS.gene49900.t1 MTR_0287s0060 26.749 243 163 5 210 441 233 471 1.93e-18 88.2
MS.gene49900.t1 MTR_4g071710 25.893 224 146 4 235 443 268 486 3.11e-18 87.4
MS.gene49900.t1 MTR_3g057900 21.909 461 316 13 10 437 15 464 3.38e-18 87.4
MS.gene49900.t1 MTR_8g466180 25.806 217 150 4 235 443 261 474 5.25e-18 86.7
MS.gene49900.t1 MTR_5g019010 23.750 480 299 17 7 437 9 470 5.71e-18 86.7
MS.gene49900.t1 MTR_5g073020 27.053 207 141 4 244 443 272 475 7.05e-18 86.3
MS.gene49900.t1 MTR_3g020780 21.861 462 305 15 28 442 30 482 7.84e-18 86.3
MS.gene49900.t1 MTR_4g088170 22.494 409 272 13 63 431 66 469 1.42e-17 85.5
MS.gene49900.t1 MTR_5g072980 29.255 188 126 3 260 443 291 475 2.11e-17 85.1
MS.gene49900.t1 MTR_5g072930 29.255 188 126 3 260 443 291 475 2.11e-17 85.1
MS.gene49900.t1 MTR_4g088195 22.604 407 272 13 63 431 66 467 2.38e-17 84.7
MS.gene49900.t1 MTR_8g046240 27.004 237 159 5 216 441 244 477 3.59e-17 84.3
MS.gene49900.t1 MTR_4g109470 27.876 226 147 6 229 441 252 474 3.60e-17 84.3
MS.gene49900.t1 MTR_4g089055 21.581 468 329 14 3 437 20 482 3.65e-17 84.3
MS.gene49900.t1 MTR_7g012330 25.806 248 152 5 193 437 248 466 5.05e-17 84.0
MS.gene49900.t1 MTR_3g057980 22.105 475 310 15 4 437 8 463 5.69e-17 83.6
MS.gene49900.t1 MTR_3g058210 25.431 232 154 5 228 443 248 476 6.27e-17 83.6
MS.gene49900.t1 MTR_3g076560 27.155 232 149 4 228 455 272 487 7.02e-17 83.6
MS.gene49900.t1 MTR_8g468780 25.359 209 141 3 245 444 210 412 8.72e-17 82.8
MS.gene49900.t1 MTR_3g058380 24.895 237 160 5 220 441 159 392 1.00e-16 82.4
MS.gene49900.t1 MTR_4g104550 26.667 240 162 5 215 443 229 465 1.16e-16 82.8
MS.gene49900.t1 MTR_5g094840 24.612 451 293 13 27 441 38 477 1.47e-16 82.4
MS.gene49900.t1 MTR_5g026520 21.311 488 321 15 1 436 1 477 1.84e-16 82.0
MS.gene49900.t1 MTR_8g027040 27.350 234 154 7 229 450 301 530 2.45e-16 81.6
MS.gene49900.t1 MTR_6g008640 29.386 228 138 7 223 430 263 487 2.58e-16 81.6
MS.gene49900.t1 MTR_3g057970 21.776 473 331 13 1 443 1 464 2.58e-16 81.6
MS.gene49900.t1 MTR_2g073420 25.301 249 176 5 210 453 248 491 2.78e-16 81.6
MS.gene49900.t1 MTR_8g020950 22.422 446 293 15 33 436 38 472 2.86e-16 81.6
MS.gene49900.t1 MTR_4g104540 25.210 238 164 5 215 441 168 402 2.97e-16 80.9
MS.gene49900.t1 MTR_7g075610 21.674 466 287 14 33 443 34 476 3.21e-16 81.3
MS.gene49900.t1 MTR_2g010380 28.054 221 143 6 255 461 289 507 3.42e-16 81.3
MS.gene49900.t1 MTR_5g016440 27.869 183 128 2 261 442 283 462 3.64e-16 81.3
MS.gene49900.t1 MTR_0171s0030 26.407 231 153 6 225 442 165 391 4.62e-16 80.5
MS.gene49900.t1 MTR_3g057860 22.553 470 322 13 7 442 13 474 5.10e-16 80.9
MS.gene49900.t1 MTR_1g103670 26.126 222 156 4 227 443 252 470 6.37e-16 80.5
MS.gene49900.t1 MTR_5g094570 21.109 469 330 13 5 441 11 471 7.34e-16 80.1
MS.gene49900.t1 MTR_1g015860 22.747 466 281 13 36 434 42 495 9.48e-16 80.1
MS.gene49900.t1 MTR_4g089025 22.269 476 327 15 3 441 20 489 9.84e-16 79.7
MS.gene49900.t1 MTR_4g104570 29.240 171 114 3 275 441 4 171 1.02e-15 75.9
MS.gene49900.t1 MTR_7g103450 27.962 211 142 3 233 437 278 484 1.20e-15 79.7
MS.gene49900.t1 MTR_6g008650 28.571 231 137 8 223 430 264 489 1.40e-15 79.3
MS.gene49900.t1 MTR_5g034900 27.041 196 137 2 255 444 299 494 1.46e-15 79.3
MS.gene49900.t1 MTR_4g094775 26.147 218 154 4 229 444 255 467 1.47e-15 79.3
MS.gene49900.t1 MTR_8g063280 28.351 194 123 6 255 437 279 467 1.50e-15 79.3
MS.gene49900.t1 MTR_8g469300 25.114 219 153 4 245 455 279 494 1.57e-15 79.3
MS.gene49900.t1 MTR_8g104030 27.381 252 153 7 223 456 18 257 1.60e-15 77.4
MS.gene49900.t1 MTR_7g092620 21.304 460 315 12 27 445 28 481 1.71e-15 79.0
MS.gene49900.t1 MTR_4g026050 22.479 476 307 15 8 437 4 463 1.72e-15 79.0
MS.gene49900.t1 MTR_0147s0030 26.891 238 156 5 210 434 268 500 1.78e-15 79.0
MS.gene49900.t1 MTR_4g095050 24.471 331 218 11 139 444 148 471 1.88e-15 79.0
MS.gene49900.t1 MTR_5g016410 24.312 218 158 4 229 444 255 467 1.91e-15 79.0
MS.gene49900.t1 MTR_7g055793 22.983 409 268 13 61 435 44 439 2.22e-15 78.6
MS.gene49900.t1 MTR_7g075580 25.746 268 170 9 190 441 219 473 2.23e-15 78.6
MS.gene49900.t1 MTR_0181s0030 25.728 206 141 5 245 442 272 473 2.35e-15 78.6
MS.gene49900.t1 MTR_8g046210 25.830 271 181 7 178 437 212 473 2.37e-15 78.6
MS.gene49900.t1 MTR_7g027960 25.581 215 148 2 235 440 261 472 2.57e-15 78.6
MS.gene49900.t1 MTR_3g024520 28.287 251 145 8 217 441 236 477 2.61e-15 78.6
MS.gene49900.t1 MTR_2g019640 22.526 475 313 19 29 461 37 498 2.75e-15 78.6
MS.gene49900.t1 MTR_7g055793 22.983 409 268 13 61 435 99 494 2.76e-15 78.6
MS.gene49900.t1 MTR_6g042610 22.222 504 290 20 2 430 7 483 2.86e-15 78.6
MS.gene49900.t1 MTR_8g098565 27.727 220 143 6 257 461 286 504 4.85e-15 77.8
MS.gene49900.t1 MTR_3g025260 27.126 247 153 8 217 441 236 477 5.14e-15 77.8
MS.gene49900.t1 MTR_3g436540 26.337 243 155 8 217 441 244 480 5.55e-15 77.4
MS.gene49900.t1 MTR_6g462640 20.782 486 326 16 5 443 1 474 6.54e-15 77.4
MS.gene49900.t1 MTR_5g023680 26.442 208 146 3 234 437 235 439 6.95e-15 77.0
MS.gene49900.t1 MTR_1g107300 26.012 173 119 4 270 437 1 169 7.18e-15 73.9
MS.gene49900.t1 MTR_5g094550 20.386 466 337 15 5 441 11 471 7.96e-15 77.0
MS.gene49900.t1 MTR_2g010300 26.316 190 116 5 257 437 285 459 8.43e-15 77.0
MS.gene49900.t1 MTR_2g010330 26.531 196 136 3 257 444 289 484 8.68e-15 77.0
MS.gene49900.t1 MTR_3g058250 20.964 477 336 15 1 441 1 472 9.73e-15 76.6
MS.gene49900.t1 MTR_8g020940 22.870 446 291 15 33 436 36 470 1.05e-14 76.6
MS.gene49900.t1 MTR_4g026080 29.070 172 111 4 272 437 1 167 1.07e-14 73.2
MS.gene49900.t1 MTR_8g076290 25.112 223 138 5 217 415 233 450 1.07e-14 76.6
MS.gene49900.t1 MTR_4g133750 22.268 485 317 11 4 443 7 476 1.15e-14 76.6
MS.gene49900.t1 MTR_0457s0020 25.500 200 138 5 106 298 24 219 1.35e-14 73.2
MS.gene49900.t1 MTR_1g097240 25.523 239 156 6 228 456 247 473 1.43e-14 76.3
MS.gene49900.t1 MTR_5g095220 27.189 217 148 3 228 437 224 437 1.45e-14 75.9
MS.gene49900.t1 MTR_5g094560 18.966 464 340 14 4 437 10 467 1.49e-14 76.3
MS.gene49900.t1 MTR_5g095290 23.094 446 291 14 33 441 41 471 1.91e-14 75.9
MS.gene49900.t1 MTR_4g102310 21.634 453 308 13 30 444 36 479 2.01e-14 75.9
MS.gene49900.t1 MTR_4g062510 25.403 248 155 6 216 437 240 483 2.05e-14 75.9
MS.gene49900.t1 MTR_1g055325 22.340 282 208 6 178 453 225 501 2.05e-14 75.9
MS.gene49900.t1 MTR_7g092600 23.387 248 172 4 212 444 242 486 2.10e-14 75.9
MS.gene49900.t1 MTR_5g073250 19.017 468 341 12 7 443 13 473 2.14e-14 75.5
MS.gene49900.t1 MTR_7g056103 24.800 250 164 5 207 436 229 474 2.34e-14 75.5
MS.gene49900.t1 MTR_4g089020 25.738 237 159 5 215 437 227 460 2.46e-14 75.5
MS.gene49900.t1 MTR_4g026200 25.000 232 167 3 214 441 239 467 2.89e-14 75.1
MS.gene49900.t1 MTR_5g095260 24.912 285 197 7 163 441 199 472 3.01e-14 75.1
MS.gene49900.t1 MTR_3g025230 27.888 251 146 8 217 441 236 477 3.10e-14 75.1
MS.gene49900.t1 MTR_6g008530 28.378 222 141 8 220 430 279 493 3.82e-14 75.1
MS.gene49900.t1 MTR_2g010320 27.650 217 145 5 257 461 285 501 5.72e-14 74.3
MS.gene49900.t1 MTR_7g028020 24.651 215 150 2 235 440 261 472 6.95e-14 73.9
MS.gene49900.t1 MTR_4g025980 26.695 236 155 5 217 437 231 463 7.15e-14 73.9
MS.gene49900.t1 MTR_2g010250 27.919 197 130 5 255 441 285 479 7.24e-14 73.9
MS.gene49900.t1 MTR_5g073320 22.026 227 166 4 223 443 253 474 7.38e-14 73.9
MS.gene49900.t1 MTR_6g008600 28.205 234 140 7 220 430 263 491 7.66e-14 73.9
MS.gene49900.t1 MTR_4g062500 25.943 212 145 3 234 437 272 479 7.83e-14 73.9
MS.gene49900.t1 MTR_4g104640 24.766 214 152 4 229 437 275 484 9.34e-14 73.6
MS.gene49900.t1 MTR_4g026030 24.312 218 151 5 228 436 98 310 1.27e-13 72.4
MS.gene49900.t1 MTR_8g104100 24.891 229 151 6 227 437 3 228 1.38e-13 71.2
MS.gene49900.t1 MTR_1g031710 24.658 219 150 5 233 443 67 278 1.53e-13 71.6
MS.gene49900.t1 MTR_7g079440 25.806 217 143 4 250 461 435 638 1.55e-13 73.2
MS.gene49900.t1 MTR_4g104660 24.017 229 157 5 223 437 255 480 1.57e-13 73.2
MS.gene49900.t1 MTR_4g088420 29.412 170 107 5 271 430 30 196 1.61e-13 70.5
MS.gene49900.t1 MTR_4g077210 22.476 307 209 9 162 444 175 476 1.62e-13 72.8
MS.gene49900.t1 MTR_1750s0010 31.788 151 96 3 275 421 5 152 1.77e-13 68.6
MS.gene49900.t1 MTR_3g058390 24.153 236 167 5 215 441 240 472 2.12e-13 72.4
MS.gene49900.t1 MTR_5g045770 29.193 161 103 4 287 441 312 467 2.73e-13 72.0
MS.gene49900.t1 MTR_8g006495 25.794 252 164 6 206 439 98 344 3.25e-13 71.2
MS.gene49900.t1 MTR_1g107295 28.161 174 118 4 268 437 311 481 3.27e-13 72.0
MS.gene49900.t1 MTR_4g025970 28.302 159 107 3 287 441 313 468 4.54e-13 71.6
MS.gene49900.t1 MTR_4g088425 35.833 120 67 4 321 430 349 468 4.79e-13 71.6
MS.gene49900.t1 MTR_2g010290 26.977 215 141 6 237 441 298 506 4.92e-13 71.6
MS.gene49900.t1 MTR_5g045250 22.083 240 170 7 208 436 253 486 6.90e-13 70.9
MS.gene49900.t1 MTR_3g104560 20.958 501 311 14 2 434 20 503 9.86e-13 70.5
MS.gene49900.t1 MTR_8g036185 23.967 242 149 6 214 442 270 489 9.91e-13 70.5
MS.gene49900.t1 MTR_5g073230 22.374 219 161 4 231 443 247 462 9.93e-13 70.5
MS.gene49900.t1 MTR_5g018990 26.267 217 122 6 252 437 262 471 1.08e-12 70.5
MS.gene49900.t1 MTR_6g042540 26.383 235 143 9 220 430 254 482 1.30e-12 70.1
MS.gene49900.t1 MTR_6g022450 28.962 183 113 6 269 439 308 485 1.34e-12 70.1
MS.gene49900.t1 MTR_1g101040 24.359 234 160 7 214 434 255 484 1.39e-12 70.1
MS.gene49900.t1 MTR_6g008430 29.032 217 129 8 230 430 275 482 1.50e-12 70.1
MS.gene49900.t1 MTR_2g437840 21.005 219 166 4 228 444 254 467 1.52e-12 69.7
MS.gene49900.t1 MTR_8g091680 22.667 225 161 4 223 437 197 418 1.80e-12 69.3
MS.gene49900.t1 MTR_1g090987 30.405 148 95 5 294 437 7 150 2.13e-12 65.9
MS.gene49900.t1 MTR_1g103680 22.642 265 187 6 188 443 216 471 2.78e-12 68.9
MS.gene49900.t1 MTR_4g048580 24.561 228 154 6 223 437 245 467 3.02e-12 68.9
MS.gene49900.t1 MTR_1g442730 25.455 220 155 4 230 443 257 473 3.44e-12 68.9
MS.gene49900.t1 MTR_8g091690 21.868 471 301 17 3 437 2 441 3.83e-12 68.6
MS.gene49900.t1 MTR_8g012590 25.792 221 143 7 233 439 261 474 5.81e-12 68.2
MS.gene49900.t1 MTR_3g057870 27.326 172 118 3 275 442 42 210 7.17e-12 65.5
MS.gene49900.t1 MTR_6g072490 25.641 234 157 7 214 434 253 482 8.04e-12 67.8
MS.gene49900.t1 MTR_4g102280 23.394 218 153 5 234 444 275 485 1.14e-11 67.0
MS.gene49900.t1 MTR_4g057645 30.392 102 67 1 346 443 6 107 1.25e-11 62.8
MS.gene49900.t1 MTR_2g072400 22.857 245 168 5 210 437 248 488 1.32e-11 67.0
MS.gene49900.t1 MTR_8g042020 20.818 269 179 6 210 461 255 506 1.41e-11 67.0
MS.gene49900.t1 MTR_2g010280 21.513 423 286 13 56 437 56 473 1.45e-11 66.6
MS.gene49900.t1 MTR_2g055470 24.082 245 165 5 210 437 250 490 1.63e-11 66.6
MS.gene49900.t1 MTR_5g009110 23.874 222 129 5 251 440 331 544 2.39e-11 66.2
MS.gene49900.t1 MTR_5g009110 23.874 222 129 5 251 440 183 396 2.43e-11 65.9
MS.gene49900.t1 MTR_4g088400 33.333 120 70 4 321 430 365 484 5.71e-11 65.1
MS.gene49900.t1 MTR_8g063260 31.008 129 76 3 322 437 347 475 6.36e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49900.t1 AT3G30180 67.957 465 147 2 1 463 1 465 0.0 690
MS.gene49900.t1 AT5G38970 66.022 465 156 2 1 463 1 465 0.0 672
MS.gene49900.t1 AT5G38970 63.504 411 148 2 1 409 1 411 0.0 566
MS.gene49900.t1 AT5G38970 66.406 384 128 1 81 463 1 384 0.0 551
MS.gene49900.t1 AT5G38970 66.406 384 128 1 81 463 1 384 0.0 551
MS.gene49900.t1 AT5G05690 36.449 428 257 6 32 448 30 453 3.18e-98 303
MS.gene49900.t1 AT3G13730 35.068 442 265 9 33 458 51 486 6.58e-92 287
MS.gene49900.t1 AT3G13730 34.772 417 255 7 33 435 51 464 5.04e-89 279
MS.gene49900.t1 AT1G12740 32.143 448 292 8 23 460 22 467 1.19e-88 278
MS.gene49900.t1 AT5G45340 34.813 428 271 5 33 458 36 457 7.08e-87 273
MS.gene49900.t1 AT4G19230 32.244 459 303 5 2 458 5 457 7.67e-87 273
MS.gene49900.t1 AT1G12740 31.938 454 291 9 23 460 22 473 1.15e-86 273
MS.gene49900.t1 AT3G50660 33.195 482 271 7 27 461 33 510 2.75e-86 273
MS.gene49900.t1 AT1G12740 31.718 454 292 9 23 460 22 473 4.92e-86 272
MS.gene49900.t1 AT4G36380 33.559 444 280 8 33 462 69 511 1.84e-85 272
MS.gene49900.t1 AT5G05690 35.904 376 226 6 32 396 30 401 1.34e-83 263
MS.gene49900.t1 AT4G19230 32.118 439 291 4 2 439 5 437 2.83e-83 265
MS.gene49900.t1 AT5G45340 34.307 411 263 4 33 442 36 440 3.71e-83 263
MS.gene49900.t1 AT3G19270 33.102 432 281 7 30 456 31 459 4.12e-81 259
MS.gene49900.t1 AT1G73340 31.116 466 301 5 8 461 21 478 9.24e-80 256
MS.gene49900.t1 AT3G19270 32.603 411 270 6 30 436 31 438 3.29e-76 245
MS.gene49900.t1 AT2G29090 31.544 447 294 9 21 461 40 480 1.20e-71 234
MS.gene49900.t1 AT2G29090 31.544 447 294 9 21 461 40 480 1.20e-71 234
MS.gene49900.t1 AT5G05690 35.119 336 208 4 119 448 3 334 4.28e-71 229
MS.gene49900.t1 AT1G55940 31.556 450 283 11 33 461 45 490 5.08e-71 233
MS.gene49900.t1 AT1G55940 32.624 423 260 11 33 434 45 463 6.58e-70 229
MS.gene49900.t1 AT5G14400 30.963 436 265 7 38 460 1 413 1.37e-69 228
MS.gene49900.t1 AT3G50660 32.587 402 231 6 27 392 33 430 6.77e-69 226
MS.gene49900.t1 AT3G44970 31.250 448 281 10 33 461 35 474 6.91e-69 227
MS.gene49900.t1 AT5G14400 31.796 412 245 7 38 436 1 389 4.60e-68 223
MS.gene49900.t1 AT1G05160 29.138 429 272 8 30 435 42 461 7.10e-66 219
MS.gene49900.t1 AT1G05160 29.138 429 272 8 30 435 42 461 7.10e-66 219
MS.gene49900.t1 AT5G48000 28.976 459 302 9 20 461 23 474 1.09e-65 219
MS.gene49900.t1 AT5G48000 28.976 459 302 9 20 461 23 474 1.09e-65 219
MS.gene49900.t1 AT5G48000 28.976 459 302 9 20 461 23 474 1.09e-65 219
MS.gene49900.t1 AT5G48000 28.976 459 302 9 20 461 23 474 1.09e-65 219
MS.gene49900.t1 AT5G48000 28.976 459 302 9 20 461 23 474 1.09e-65 219
MS.gene49900.t1 AT5G48000 28.976 459 302 9 20 461 23 474 1.09e-65 219
MS.gene49900.t1 AT5G48000 28.976 459 302 9 20 461 64 515 4.20e-65 218
MS.gene49900.t1 AT2G32440 28.384 458 293 9 5 437 13 460 3.20e-64 215
MS.gene49900.t1 AT2G32440 28.384 458 293 9 5 437 13 460 3.20e-64 215
MS.gene49900.t1 AT4G15300 28.702 439 298 8 33 461 25 458 4.47e-62 209
MS.gene49900.t1 AT1G78490 29.754 447 288 12 20 448 23 461 4.81e-62 209
MS.gene49900.t1 AT4G15300 28.702 439 298 8 33 461 35 468 5.08e-62 209
MS.gene49900.t1 AT1G65670 28.670 436 294 8 33 459 35 462 1.47e-61 208
MS.gene49900.t1 AT4G15393 28.145 469 318 10 4 461 7 467 8.78e-61 206
MS.gene49900.t1 AT4G15396 28.145 469 318 11 4 460 7 468 1.98e-60 205
MS.gene49900.t1 AT4G15396 28.764 445 298 11 4 436 7 444 5.63e-58 198
MS.gene49900.t1 AT1G19630 27.907 473 313 9 12 461 6 473 6.08e-58 198
MS.gene49900.t1 AT4G15300 27.549 461 297 10 33 461 25 480 1.13e-56 195
MS.gene49900.t1 AT2G42850 29.821 446 281 11 36 461 48 481 8.10e-55 190
MS.gene49900.t1 AT1G19630 27.027 444 302 7 12 436 6 446 8.44e-55 189
MS.gene49900.t1 AT1G12740 29.683 347 233 7 23 360 22 366 3.83e-54 185
MS.gene49900.t1 AT4G36380 30.769 338 222 6 33 358 69 406 7.58e-54 186
MS.gene49900.t1 AT5G14400 28.796 382 241 6 88 461 2 360 2.29e-53 183
MS.gene49900.t1 AT4G15396 27.731 476 290 14 4 460 7 447 5.45e-53 184
MS.gene49900.t1 AT5G14400 32.635 334 208 5 38 358 1 330 5.73e-53 181
MS.gene49900.t1 AT2G29090 29.897 388 256 8 83 461 5 385 1.49e-52 182
MS.gene49900.t1 AT1G78490 29.744 390 249 11 20 392 23 404 3.15e-52 181
MS.gene49900.t1 AT3G30290 28.250 400 277 7 67 461 4 398 9.34e-52 180
MS.gene49900.t1 AT5G36110 28.700 446 294 11 33 460 34 473 4.33e-51 180
MS.gene49900.t1 AT4G15396 28.571 399 269 9 4 392 7 399 7.40e-50 175
MS.gene49900.t1 AT4G15310 28.216 482 309 15 3 461 4 471 4.15e-49 175
MS.gene49900.t1 AT4G15393 27.638 398 272 8 4 392 7 397 1.47e-48 171
MS.gene49900.t1 AT1G19630 25.412 425 289 7 12 413 6 425 1.34e-45 164
MS.gene49900.t1 AT2G42850 29.345 351 219 9 36 367 48 388 4.78e-38 143
MS.gene49900.t1 AT4G15393 26.131 398 245 9 4 392 7 364 6.56e-38 142
MS.gene49900.t1 AT2G29090 29.655 290 196 6 21 306 40 325 6.03e-36 136
MS.gene49900.t1 AT5G36110 27.350 351 234 9 33 367 34 379 9.84e-33 128
MS.gene49900.t1 AT3G44970 28.667 300 190 7 33 316 35 326 3.75e-31 123
MS.gene49900.t1 AT5G36140 26.855 283 189 9 28 297 28 305 9.16e-23 99.0
MS.gene49900.t1 AT2G34490 22.629 464 322 15 29 461 33 490 1.64e-22 100
MS.gene49900.t1 AT1G11600 23.348 454 288 14 33 436 35 478 4.35e-22 99.4
MS.gene49900.t1 AT2G28860 21.154 468 326 16 27 462 31 487 5.19e-21 95.9
MS.gene49900.t1 AT4G37330 29.954 217 143 5 229 442 250 460 4.89e-20 93.2
MS.gene49900.t1 AT4G37430 25.617 324 216 10 141 444 151 469 5.60e-20 92.8
MS.gene49900.t1 AT5G04330 26.971 241 144 7 220 436 238 470 8.59e-20 92.4
MS.gene49900.t1 AT5G36130 32.117 137 90 2 326 460 1 136 1.04e-19 85.9
MS.gene49900.t1 AT5G57220 22.175 469 318 15 5 444 10 460 4.21e-19 90.1
MS.gene49900.t1 AT5G04660 24.580 476 300 14 5 436 19 479 4.72e-19 90.1
MS.gene49900.t1 AT3G10560 23.077 481 305 17 3 436 18 480 5.69e-19 89.7
MS.gene49900.t1 AT4G37400 25.444 338 225 11 130 444 133 466 8.47e-19 89.4
MS.gene49900.t1 AT1G01190 27.273 253 161 6 200 436 254 499 9.62e-19 89.4
MS.gene49900.t1 AT1G01190 27.273 253 161 6 200 436 259 504 1.00e-18 89.4
MS.gene49900.t1 AT5G07990 29.386 228 143 7 229 441 249 473 1.06e-18 89.0
MS.gene49900.t1 AT2G23220 29.167 240 162 5 206 442 244 478 1.30e-18 89.0
MS.gene49900.t1 AT5G25180 19.658 468 330 11 4 437 5 460 2.37e-18 87.8
MS.gene49900.t1 AT4G37410 28.017 232 160 4 212 439 233 461 3.11e-18 87.4
MS.gene49900.t1 AT5G09970 28.000 225 149 6 225 438 284 506 3.25e-18 87.8
MS.gene49900.t1 AT5G25120 20.742 458 322 11 14 437 10 460 4.43e-18 87.0
MS.gene49900.t1 AT3G26300 28.261 230 147 6 236 453 257 480 6.27e-18 86.7
MS.gene49900.t1 AT4G37320 25.703 249 171 6 202 442 221 463 6.44e-18 86.7
MS.gene49900.t1 AT2G34500 20.771 467 332 16 28 463 32 491 7.38e-18 86.3
MS.gene49900.t1 AT2G23190 27.468 233 161 5 213 442 280 507 7.63e-18 86.7
MS.gene49900.t1 AT1G64940 26.496 234 162 5 219 444 254 485 1.25e-17 85.9
MS.gene49900.t1 AT3G10570 23.419 427 276 11 51 436 64 480 3.39e-17 84.3
MS.gene49900.t1 AT2G12190 24.837 459 294 15 33 444 32 486 4.54e-17 84.0
MS.gene49900.t1 AT3G26310 27.014 211 142 5 236 437 256 463 7.18e-17 83.2
MS.gene49900.t1 AT2G45550 21.086 479 324 15 9 441 8 478 1.24e-16 82.8
MS.gene49900.t1 AT2G45570 26.222 225 152 5 221 441 265 479 1.41e-16 82.4
MS.gene49900.t1 AT2G28850 20.085 468 331 16 27 462 31 487 1.59e-16 82.4
MS.gene49900.t1 AT1G33730 26.728 217 148 5 230 441 132 342 1.99e-16 81.3
MS.gene49900.t1 AT1G33730 26.728 217 148 5 230 441 132 342 1.99e-16 81.3
MS.gene49900.t1 AT1G64930 28.141 199 130 4 255 444 291 485 2.25e-16 82.0
MS.gene49900.t1 AT3G03470 24.622 463 290 18 33 444 31 485 2.44e-16 81.6
MS.gene49900.t1 AT5G35715 25.818 275 186 8 174 436 134 402 3.22e-16 81.3
MS.gene49900.t1 AT5G25140 20.697 459 323 9 13 437 9 460 3.50e-16 81.3
MS.gene49900.t1 AT1G33720 26.407 231 158 6 215 441 124 346 1.11e-15 79.0
MS.gene49900.t1 AT1G33720 26.407 231 158 6 215 441 124 346 1.11e-15 79.0
MS.gene49900.t1 AT1G33720 26.407 231 158 6 215 441 124 346 1.11e-15 79.0
MS.gene49900.t1 AT3G26150 29.858 211 139 6 237 441 265 472 1.22e-15 79.7
MS.gene49900.t1 AT1G33720 26.407 231 158 6 215 441 256 478 1.23e-15 79.7
MS.gene49900.t1 AT3G26330 25.385 260 168 8 199 437 210 464 1.84e-15 79.0
MS.gene49900.t1 AT5G25130 28.177 181 123 3 268 444 290 467 1.93e-15 79.0
MS.gene49900.t1 AT2G24180 26.552 290 187 11 168 437 187 470 2.08e-15 79.0
MS.gene49900.t1 AT2G45580 26.291 213 146 4 237 441 116 325 3.12e-15 77.4
MS.gene49900.t1 AT2G45560 26.570 207 125 4 245 437 281 474 3.15e-15 78.2
MS.gene49900.t1 AT4G36220 20.796 452 300 14 40 443 47 488 3.24e-15 78.2
MS.gene49900.t1 AT2G40890 23.451 226 160 5 223 443 251 468 4.87e-15 77.8
MS.gene49900.t1 AT2G42250 23.474 426 257 13 41 444 109 487 5.08e-15 77.8
MS.gene49900.t1 AT1G74110 22.101 276 167 8 200 440 249 511 5.39e-15 77.8
MS.gene49900.t1 AT2G45580 26.291 213 146 4 237 441 270 479 5.47e-15 77.4
MS.gene49900.t1 AT1G64950 23.362 458 300 14 33 444 32 484 5.65e-15 77.4
MS.gene49900.t1 AT4G37310 24.153 236 172 4 216 444 242 477 6.18e-15 77.4
MS.gene49900.t1 AT5G06900 27.143 210 143 4 216 418 239 445 6.88e-15 77.4
MS.gene49900.t1 AT3G26320 26.066 211 144 5 236 437 257 464 7.13e-15 77.0
MS.gene49900.t1 AT3G26290 26.728 217 146 5 231 437 264 477 1.03e-14 76.6
MS.gene49900.t1 AT3G26290 26.728 217 146 5 231 437 251 464 1.05e-14 76.6
MS.gene49900.t1 AT3G53300 25.000 280 192 9 174 441 196 469 1.09e-14 76.6
MS.gene49900.t1 AT3G26210 28.042 189 130 3 252 436 280 466 1.39e-14 76.3
MS.gene49900.t1 AT2G46960 22.943 401 280 13 62 436 90 487 1.49e-14 76.3
MS.gene49900.t1 AT3G26160 30.851 188 121 6 240 421 268 452 1.60e-14 76.3
MS.gene49900.t1 AT1G13080 27.907 215 146 6 235 443 263 474 1.94e-14 75.9
MS.gene49900.t1 AT3G26170 27.488 211 144 6 237 441 265 472 2.03e-14 75.9
MS.gene49900.t1 AT3G28740 26.522 230 161 5 213 439 244 468 2.28e-14 75.5
MS.gene49900.t1 AT3G26180 27.488 211 144 6 237 441 131 338 2.33e-14 74.7
MS.gene49900.t1 AT1G13080 27.907 215 146 6 235 443 145 356 2.75e-14 74.7
MS.gene49900.t1 AT2G46960 25.103 243 165 7 208 436 132 371 3.43e-14 74.7
MS.gene49900.t1 AT2G46950 26.316 228 156 5 215 435 318 540 4.71e-14 74.7
MS.gene49900.t1 AT5G67310 25.862 232 152 7 216 437 248 469 4.92e-14 74.7
MS.gene49900.t1 AT1G28430 26.316 228 153 5 227 444 260 482 5.21e-14 74.7
MS.gene49900.t1 AT4G37370 25.581 215 151 5 229 440 252 460 5.39e-14 74.3
MS.gene49900.t1 AT5G52400 25.620 242 161 8 208 435 253 489 5.42e-14 74.3
MS.gene49900.t1 AT4G15380 25.500 200 138 2 245 436 277 473 6.56e-14 74.3
MS.gene49900.t1 AT1G66540 24.464 233 166 6 216 444 67 293 7.08e-14 72.8
MS.gene49900.t1 AT4G15330 25.481 208 145 4 243 444 247 450 8.30e-14 73.9
MS.gene49900.t1 AT2G46660 24.427 262 173 6 200 442 248 503 9.20e-14 73.9
MS.gene49900.t1 AT4G15330 25.481 208 145 4 243 444 275 478 9.45e-14 73.6
MS.gene49900.t1 AT2G14100 26.699 206 141 3 245 444 282 483 9.46e-14 73.6
MS.gene49900.t1 AT3G61040 24.883 213 151 5 235 441 258 467 1.22e-13 73.2
MS.gene49900.t1 AT1G13090 27.778 216 148 4 227 436 250 463 1.25e-13 73.2
MS.gene49900.t1 AT3G25180 27.072 181 123 4 269 444 307 483 1.50e-13 73.2
MS.gene49900.t1 AT1G66540 24.464 233 166 6 216 444 126 352 1.58e-13 72.4
MS.gene49900.t1 AT2G27000 21.311 427 289 13 57 444 64 482 1.83e-13 72.8
MS.gene49900.t1 AT3G20140 23.636 220 157 4 232 444 265 480 1.83e-13 72.8
MS.gene49900.t1 AT1G64900 22.707 458 284 16 41 444 39 480 3.03e-13 72.0
MS.gene49900.t1 AT5G42580 24.046 262 180 7 198 444 212 469 3.03e-13 72.0
MS.gene49900.t1 AT3G14630 25.430 291 196 8 161 437 197 480 3.04e-13 72.0
MS.gene49900.t1 AT3G20940 24.242 231 157 6 228 444 259 485 3.46e-13 72.0
MS.gene49900.t1 AT3G14630 22.800 500 303 17 1 437 56 535 4.12e-13 72.0
MS.gene49900.t1 AT3G32047 25.728 206 143 3 245 444 280 481 4.51e-13 71.6
MS.gene49900.t1 AT3G20090 20.843 427 290 12 57 444 68 485 5.25e-13 71.2
MS.gene49900.t1 AT3G26200 25.475 263 178 8 194 444 216 472 6.40e-13 71.2
MS.gene49900.t1 AT4G15350 26.442 208 137 5 245 440 272 475 1.10e-12 70.5
MS.gene49900.t1 AT5G61320 22.706 436 276 15 48 441 45 461 1.26e-12 70.1
MS.gene49900.t1 AT3G20090 23.671 207 147 3 245 444 145 347 1.99e-12 68.9
MS.gene49900.t1 AT4G12300 21.978 455 289 15 27 430 36 475 2.13e-12 69.3
MS.gene49900.t1 AT4G13310 26.027 292 178 10 197 455 210 496 2.18e-12 69.3
MS.gene49900.t1 AT5G57260 23.013 239 166 4 233 462 254 483 2.54e-12 69.3
MS.gene49900.t1 AT3G14690 22.604 407 268 13 64 437 127 519 2.73e-12 69.3
MS.gene49900.t1 AT1G13100 28.351 194 130 4 259 445 284 475 2.80e-12 68.9
MS.gene49900.t1 AT1G67110 24.014 279 184 7 166 434 219 479 3.26e-12 68.9
MS.gene49900.t1 AT3G14690 22.604 407 268 13 64 437 92 484 3.47e-12 68.9
MS.gene49900.t1 AT3G53280 26.087 230 155 7 219 436 236 462 3.95e-12 68.6
MS.gene49900.t1 AT4G37360 25.281 178 125 4 269 444 294 465 4.64e-12 68.6
MS.gene49900.t1 AT5G06905 25.514 243 155 6 234 455 261 498 4.85e-12 68.6
MS.gene49900.t1 AT3G48270 20.788 457 326 14 10 436 4 454 8.83e-12 67.4
MS.gene49900.t1 AT3G26220 26.512 215 138 6 241 443 269 475 9.63e-12 67.4
MS.gene49900.t1 AT2G26170 23.451 452 275 17 36 430 48 485 9.83e-12 67.4
MS.gene49900.t1 AT2G25160 25.000 260 171 8 192 434 223 475 2.21e-11 66.2
MS.gene49900.t1 AT3G20100 19.905 422 291 14 62 444 71 484 2.79e-11 65.9
MS.gene49900.t1 AT1G24540 23.755 261 177 8 207 445 240 500 3.41e-11 65.9
MS.gene49900.t1 AT1G34540 21.937 506 313 18 12 459 6 487 4.14e-11 65.5
MS.gene49900.t1 AT4G31950 26.556 241 136 10 220 430 243 472 5.25e-11 65.1
MS.gene49900.t1 AT5G24950 24.627 268 167 8 215 454 234 494 9.54e-11 64.3

Find 85 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAGTCACTTCTTGATATT+TGG 0.178235 7.4:+83646531 MS.gene49900:CDS
GCTATCTTCATTGCAATTCT+AGG 0.194704 7.4:+83643137 MS.gene49900:CDS
ATCATTACAATTATGTATTC+TGG 0.218862 7.4:+83645080 MS.gene49900:CDS
GCTATTCCCAACTCCTTTCC+TGG 0.258735 7.4:-83646573 None:intergenic
CTCATTTCATCAAGAACTTT+AGG 0.263769 7.4:-83645158 None:intergenic
CTCCCTCCCTATTAATCTTC+CGG 0.269006 7.4:+83644564 MS.gene49900:CDS
ACTCATGACATGGAATTAAA+TGG 0.294757 7.4:+83645644 MS.gene49900:CDS
AGATTAGCTACAATAGTTAA+TGG 0.301609 7.4:+83645605 MS.gene49900:CDS
TTTGTGCCCGGAAGATTAAT+AGG 0.328943 7.4:-83644571 None:intergenic
TTGCAATCAATAGGATCTTC+TGG 0.335472 7.4:-83645310 None:intergenic
ACATATATCCTCCACCCTTT+AGG 0.353200 7.4:-83646326 None:intergenic
TGTAACATTGCAGCTGTTCA+TGG 0.357969 7.4:+83644093 MS.gene49900:CDS
AGTGGATCATGATAAAGAAT+TGG 0.362246 7.4:-83646374 None:intergenic
TCCCTCCCTATTAATCTTCC+GGG 0.366051 7.4:+83644565 MS.gene49900:CDS
GAAGGAAAAGGGTTTGTTCC+AGG 0.369270 7.4:+83644036 MS.gene49900:CDS
GGATCCATTGATACAATTGT+AGG 0.391622 7.4:-83643985 None:intergenic
AAACTATCGTCGTGGATTAC+AGG 0.393992 7.4:+83644591 MS.gene49900:CDS
CAATCCATGTTAGATATCTT+AGG 0.397681 7.4:+83644066 MS.gene49900:CDS
CAGGCTATTTGGTTCCTAAA+GGG 0.400620 7.4:+83646312 MS.gene49900:intron
TCAGGCTATTTGGTTCCTAA+AGG 0.411407 7.4:+83646311 MS.gene49900:intron
TGAGAACTCATGTAAGTGAT+TGG 0.413209 7.4:+83644208 MS.gene49900:CDS
CTCCATGGATTAAATGTTAG+TGG 0.418424 7.4:-83646392 None:intergenic
TATTGATGAATGAAGGAAAA+GGG 0.421273 7.4:+83644025 MS.gene49900:CDS
TTTGAAGCAAATTGCTGGTA+TGG 0.423349 7.4:+83644480 MS.gene49900:CDS
TGAGTAAGGTACTTGAAGAA+AGG 0.434958 7.4:+83644961 MS.gene49900:CDS
AATATGTATCTATTTAGTTC+TGG 0.436208 7.4:-83644006 None:intergenic
TCATCTTTGAAGCAAATTGC+TGG 0.436244 7.4:+83644475 MS.gene49900:CDS
ATGTCCTACAATTGTATCAA+TGG 0.444079 7.4:+83643981 MS.gene49900:CDS
ACTACTTTGTAACTAGATAC+AGG 0.444899 7.4:+83646616 MS.gene49900:CDS
TTGAGATCATTGCAATCAAT+AGG 0.446297 7.4:-83645319 None:intergenic
TGCTTAGTTGTTTGATGAGA+GGG 0.449297 7.4:+83645012 MS.gene49900:CDS
AACATGGATTGAGGGTATCC+TGG 0.456330 7.4:-83644054 None:intergenic
CCTAGAGTTGTGGCACCAAA+TGG 0.457326 7.4:+83646793 MS.gene49900:CDS
GTGGATCATGATAAAGAATT+GGG 0.459624 7.4:-83646373 None:intergenic
CCATTTGGTGCCACAACTCT+AGG 0.464366 7.4:-83646793 None:intergenic
TTGTGCCCGGAAGATTAATA+GGG 0.464930 7.4:-83644570 None:intergenic
CTAAAGTTCTTGATGAAATG+AGG 0.466378 7.4:+83645159 MS.gene49900:CDS
ACTCTTATGTGTAGTCCATT+TGG 0.468239 7.4:-83646808 None:intergenic
CATTCAAGACAAAACTAAAG+AGG 0.477080 7.4:+83644248 MS.gene49900:CDS
AGTCACTTCTTGATATTTGG+AGG 0.480256 7.4:+83646534 MS.gene49900:CDS
GGTTTGCCACAAGGAACAAT+GGG 0.481437 7.4:+83643227 MS.gene49900:CDS
AAGATATCTAACATGGATTG+AGG 0.489832 7.4:-83644063 None:intergenic
GAGAACTCATGTAAGTGATT+GGG 0.489887 7.4:+83644209 MS.gene49900:CDS
CAATGTCCAGGAAAGGAGTT+GGG 0.512088 7.4:+83646567 MS.gene49900:CDS
TACAAAGTAGTGCAAGAAAG+TGG 0.516898 7.4:-83646604 None:intergenic
CACTTCTTGATATTTGGAGG+TGG 0.519239 7.4:+83646537 MS.gene49900:CDS
AGCTGATTTCTGATTAAAGT+GGG 0.521048 7.4:-83644162 None:intergenic
AGATACATATTGATGAATGA+AGG 0.521192 7.4:+83644018 MS.gene49900:CDS
GAGGTAAGATACAGAAGGAA+AGG 0.524204 7.4:+83643206 MS.gene49900:CDS
ATCCACTAACATTTAATCCA+TGG 0.530365 7.4:+83646390 MS.gene49900:CDS
ATTTAATCCATGGAGATGGC+TGG 0.530532 7.4:+83646400 MS.gene49900:CDS
AGATATCTAACATGGATTGA+GGG 0.530731 7.4:-83644062 None:intergenic
AAGCTGATTTCTGATTAAAG+TGG 0.538539 7.4:-83644163 None:intergenic
TTAAAGAACTCTGTCATGAA+AGG 0.545159 7.4:-83644523 None:intergenic
TATTTCAACTACATCAATGA+TGG 0.545998 7.4:+83645112 MS.gene49900:CDS
CCCTCTCATGTACTTGTGAG+TGG 0.547456 7.4:-83644118 None:intergenic
ATATTGATGAATGAAGGAAA+AGG 0.549120 7.4:+83644024 MS.gene49900:CDS
ACAATGTCCAGGAAAGGAGT+TGG 0.550547 7.4:+83646566 MS.gene49900:CDS
AATGAAATTTCCTAGAGTTG+TGG 0.552844 7.4:+83646783 MS.gene49900:CDS
AGGTTTGCCACAAGGAACAA+TGG 0.562623 7.4:+83643226 MS.gene49900:CDS
CATTGCAGATGGGAAGAAGT+AGG 0.566871 7.4:+83646748 MS.gene49900:intron
CCACGACGATAGTTTGTGCC+CGG 0.567627 7.4:-83644583 None:intergenic
TTACTAACCAGCCATCTCCA+TGG 0.568742 7.4:-83646407 None:intergenic
TAAAGTTCTTGATGAAATGA+GGG 0.569092 7.4:+83645160 MS.gene49900:CDS
ATGCTTAGTTGTTTGATGAG+AGG 0.570037 7.4:+83645011 MS.gene49900:CDS
GCTATTTGGTTCCTAAAGGG+TGG 0.578500 7.4:+83646315 MS.gene49900:CDS
TAACATTTAATCCATGGAGA+TGG 0.582166 7.4:+83646396 MS.gene49900:CDS
ATTTGGTTCCTAAAGGGTGG+AGG 0.584159 7.4:+83646318 MS.gene49900:CDS
TGCCCGGAAGATTAATAGGG+AGG 0.593624 7.4:-83644567 None:intergenic
CACTAGACAATGTCCAGGAA+AGG 0.600963 7.4:+83646560 MS.gene49900:CDS
GGTGGCACTAGACAATGTCC+AGG 0.602165 7.4:+83646555 MS.gene49900:CDS
GTCCATGAGGTTTACTCGCG+CGG 0.608522 7.4:+83645342 MS.gene49900:CDS
GGCCACCCCATTGTTCCTTG+TGG 0.609487 7.4:-83643233 None:intergenic
ACAACTGAGTTTCTTAAACA+AGG 0.614414 7.4:+83643269 MS.gene49900:CDS
TCCACTCACAAGTACATGAG+AGG 0.625908 7.4:+83644117 MS.gene49900:CDS
GCCCGGAAGATTAATAGGGA+GGG 0.628958 7.4:-83644566 None:intergenic
AGAAGGAAAGGTTTGCCACA+AGG 0.636336 7.4:+83643218 MS.gene49900:CDS
TACCGCGCGAGTAAACCTCA+TGG 0.638892 7.4:-83645344 None:intergenic
TGCAGATGGGAAGAAGTAGG+AGG 0.640915 7.4:+83646751 MS.gene49900:intron
GGAATGAGGTAAGATACAGA+AGG 0.641637 7.4:+83643201 MS.gene49900:CDS
TGCCACAAGGAACAATGGGG+TGG 0.650564 7.4:+83643231 MS.gene49900:CDS
CCGGGCACAAACTATCGTCG+TGG 0.667055 7.4:+83644583 MS.gene49900:CDS
CCACTCACAAGTACATGAGA+GGG 0.670298 7.4:+83644118 MS.gene49900:CDS
GCAATGATCTCAAGTCCATG+AGG 0.698672 7.4:+83645329 MS.gene49900:CDS
GTTTGCCACAAGGAACAATG+GGG 0.780515 7.4:+83643228 MS.gene49900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTTTTCCAAAATTT+CGG + chr7.4:83643689-83643708 MS.gene49900:intron 10.0%
!! AAAATTTAGTCATATGAAAT+AGG - chr7.4:83646658-83646677 None:intergenic 15.0%
!! ATTTATGTAATACATTCAAA+AGG - chr7.4:83643602-83643621 None:intergenic 15.0%
!! TAGATTACTTTAATATGATA+TGG + chr7.4:83645944-83645963 MS.gene49900:intron 15.0%
!! TTAAAGTAATCTAAGTAATT+TGG - chr7.4:83645937-83645956 None:intergenic 15.0%
!! TTTATGTAATACATTCAAAA+GGG - chr7.4:83643601-83643620 None:intergenic 15.0%
!!! AAAAATGTTTTTGACTTTTT+TGG + chr7.4:83645731-83645750 MS.gene49900:intron 15.0%
!!! ATATTTGTAAATGATTTTTC+AGG + chr7.4:83646293-83646312 MS.gene49900:intron 15.0%
!!! ATTCTATTTCCATATTTTTT+TGG + chr7.4:83646180-83646199 MS.gene49900:intron 15.0%
!!! TATTATTAACATTTTGAGTA+AGG + chr7.4:83644947-83644966 MS.gene49900:CDS 15.0%
!!! TTTTTTTTGGTTGAAAATTT+AGG + chr7.4:83644807-83644826 MS.gene49900:intron 15.0%
!! ACTTAAATAAAGTTACACAT+TGG - chr7.4:83644777-83644796 None:intergenic 20.0%
!! ATCATTACAATTATGTATTC+TGG + chr7.4:83645080-83645099 MS.gene49900:CDS 20.0%
!! GAATATATTAATTGCAATAG+AGG + chr7.4:83646698-83646717 MS.gene49900:intron 20.0%
!! TATAAAGAAAATGAAACCAA+TGG - chr7.4:83643492-83643511 None:intergenic 20.0%
!! TATGAGAAACTAATGTTAAT+TGG + chr7.4:83643778-83643797 MS.gene49900:intron 20.0%
!! TCTTATGTATTTATGTTGAT+GGG + chr7.4:83645702-83645721 MS.gene49900:intron 20.0%
!! TGAATGTATTACATAAATCA+TGG + chr7.4:83643604-83643623 MS.gene49900:intron 20.0%
!! TTTACATAGTGAAATGAAAA+GGG - chr7.4:83645886-83645905 None:intergenic 20.0%
!!! AATATGTATCTATTTAGTTC+TGG - chr7.4:83644009-83644028 None:intergenic 20.0%
!!! ACAAATGTTTTTTTAACAGA+TGG + chr7.4:83644444-83644463 MS.gene49900:intron 20.0%
!!! CATTGTAACTTTTTTCTTTT+TGG + chr7.4:83643904-83643923 MS.gene49900:intron 20.0%
!!! TATATTTGATTGATTCTTGT+AGG + chr7.4:83644914-83644933 MS.gene49900:intron 20.0%
!!! TTCAAGTTGTTTGTTAATTA+TGG - chr7.4:83646486-83646505 None:intergenic 20.0%
!!! TTTGTAGCTTCTAAAAATTA+CGG - chr7.4:83644708-83644727 None:intergenic 20.0%
!!! TTTTACATAGTGAAATGAAA+AGG - chr7.4:83645887-83645906 None:intergenic 20.0%
!!! TTTTTCAAATCTCACATATT+AGG + chr7.4:83643958-83643977 MS.gene49900:CDS 20.0%
! AAATGAGTTAAACTAAGTGT+GGG + chr7.4:83643831-83643850 MS.gene49900:intron 25.0%
! AAGAGCTAGAGAAATTAAAT+AGG - chr7.4:83645686-83645705 None:intergenic 25.0%
! AAGTTACAATGATAACCAAT+AGG - chr7.4:83643895-83643914 None:intergenic 25.0%
! ACATTGACACCAAAAAAATA+TGG - chr7.4:83646192-83646211 None:intergenic 25.0%
! ACTTTAATATGATATGGTCA+TGG + chr7.4:83645950-83645969 MS.gene49900:intron 25.0%
! AGATACATATTGATGAATGA+AGG + chr7.4:83644018-83644037 MS.gene49900:CDS 25.0%
! AGTTACAATGATAACCAATA+GGG - chr7.4:83643894-83643913 None:intergenic 25.0%
! ATATTGATGAATGAAGGAAA+AGG + chr7.4:83644024-83644043 MS.gene49900:CDS 25.0%
! CAACCAAAAAAAAAGAATGA+TGG - chr7.4:83644800-83644819 None:intergenic 25.0%
! CATACACTTATACTTTCAAT+AGG - chr7.4:83646049-83646068 None:intergenic 25.0%
! CTACATAATACTAACATATG+TGG + chr7.4:83646145-83646164 MS.gene49900:intron 25.0%
! CTCTTATGTATTTATGTTGA+TGG + chr7.4:83645701-83645720 MS.gene49900:intron 25.0%
! GTAAAACTCTATATTTATCG+TGG - chr7.4:83644683-83644702 None:intergenic 25.0%
! TAAAGTTCTTGATGAAATGA+GGG + chr7.4:83645160-83645179 MS.gene49900:CDS 25.0%
! TAGCAACATGAACAAATAAT+TGG - chr7.4:83644864-83644883 None:intergenic 25.0%
! TAGTGAGTCTAACAAAATTA+CGG + chr7.4:83644306-83644325 MS.gene49900:intron 25.0%
! TATGTTCATGTTTCTTGTTA+GGG + chr7.4:83643430-83643449 MS.gene49900:intron 25.0%
! TATTGATGAATGAAGGAAAA+GGG + chr7.4:83644025-83644044 MS.gene49900:CDS 25.0%
! TATTTCAACTACATCAATGA+TGG + chr7.4:83645112-83645131 MS.gene49900:CDS 25.0%
! TCATGAAAAATCAAAGATCA+AGG + chr7.4:83643300-83643319 MS.gene49900:CDS 25.0%
! TTTAATGTTACATTGCAGAT+GGG + chr7.4:83646738-83646757 MS.gene49900:intron 25.0%
!! AGATTAGCTACAATAGTTAA+TGG + chr7.4:83645605-83645624 MS.gene49900:CDS 25.0%
!! ATCTTTATTTGCACAAAACA+TGG - chr7.4:83644833-83644852 None:intergenic 25.0%
!! ATTGGAGCTTCTAAAAATTA+CGG - chr7.4:83644759-83644778 None:intergenic 25.0%
!! CACATATATTACCGAAATTT+TGG - chr7.4:83643703-83643722 None:intergenic 25.0%
!! GATGAATGAATTTCTTTTTC+TGG - chr7.4:83645805-83645824 None:intergenic 25.0%
!! TTATTCATTCATGTACCTTT+TGG + chr7.4:83643861-83643880 MS.gene49900:intron 25.0%
!! TTTTAATGTTACATTGCAGA+TGG + chr7.4:83646737-83646756 MS.gene49900:intron 25.0%
!! TTTTCCTAAGATATCTAACA+TGG - chr7.4:83644073-83644092 None:intergenic 25.0%
!!! AAATGATTTTTCAGGCTATT+TGG + chr7.4:83646301-83646320 MS.gene49900:intron 25.0%
!!! AGTCCATCATTCTTTTTTTT+TGG + chr7.4:83644794-83644813 MS.gene49900:intron 25.0%
!!! CTTTGATTTTTCATGAAGTT+AGG - chr7.4:83643296-83643315 None:intergenic 25.0%
!!! CTTTTTTGATACTGAAAAAG+TGG - chr7.4:83645767-83645786 None:intergenic 25.0%
!!! GTTTTTAAAGACTATTCCAT+TGG + chr7.4:83643473-83643492 MS.gene49900:intron 25.0%
!!! TAAATGTCATTTTGGACTAA+CGG - chr7.4:83643741-83643760 None:intergenic 25.0%
!!! TCATGATGTAAATGTCATTT+TGG - chr7.4:83643749-83643768 None:intergenic 25.0%
AAAGAAATTCATTCATCCCT+AGG + chr7.4:83645808-83645827 MS.gene49900:intron 30.0%
AACAAACAACTTGAAAATGC+AGG + chr7.4:83646491-83646510 MS.gene49900:intron 30.0%
AATGAAATTTCCTAGAGTTG+TGG + chr7.4:83646783-83646802 MS.gene49900:CDS 30.0%
ACAAACAACTTGAAAATGCA+GGG + chr7.4:83646492-83646511 MS.gene49900:intron 30.0%
ACAACTGAGTTTCTTAAACA+AGG + chr7.4:83643269-83643288 MS.gene49900:CDS 30.0%
ACGTTAATTAGAAAAGACGA+AGG - chr7.4:83644626-83644645 None:intergenic 30.0%
ACTACTTTGTAACTAGATAC+AGG + chr7.4:83646616-83646635 MS.gene49900:CDS 30.0%
ACTCATGACATGGAATTAAA+TGG + chr7.4:83645644-83645663 MS.gene49900:CDS 30.0%
AGGTTGAAAAATTAGGTAGT+GGG + chr7.4:83645978-83645997 MS.gene49900:intron 30.0%
AGTGAGTCTAACAAAATTAC+GGG + chr7.4:83644307-83644326 MS.gene49900:intron 30.0%
AGTGGATCATGATAAAGAAT+TGG - chr7.4:83646377-83646396 None:intergenic 30.0%
ATCCACTAACATTTAATCCA+TGG + chr7.4:83646390-83646409 MS.gene49900:CDS 30.0%
ATGACATGGAATTAAATGGT+GGG + chr7.4:83645648-83645667 MS.gene49900:intron 30.0%
ATGTCCTACAATTGTATCAA+TGG + chr7.4:83643981-83644000 MS.gene49900:CDS 30.0%
ATGTTCATGTTTCTTGTTAG+GGG + chr7.4:83643431-83643450 MS.gene49900:intron 30.0%
CAAATGAGTTAAACTAAGTG+TGG + chr7.4:83643830-83643849 MS.gene49900:intron 30.0%
CAATAGGGTAAATTACCAAA+AGG - chr7.4:83643879-83643898 None:intergenic 30.0%
CAATCCATGTTAGATATCTT+AGG + chr7.4:83644066-83644085 MS.gene49900:CDS 30.0%
CATTCAAGACAAAACTAAAG+AGG + chr7.4:83644248-83644267 MS.gene49900:CDS 30.0%
CGTTAATTAGAAAAGACGAA+GGG - chr7.4:83644625-83644644 None:intergenic 30.0%
CTAAAGTTCTTGATGAAATG+AGG + chr7.4:83645159-83645178 MS.gene49900:CDS 30.0%
CTAACAAGAAACATGAACAT+AGG - chr7.4:83643431-83643450 None:intergenic 30.0%
CTATCGAAAATAGAAGTTCA+CGG - chr7.4:83645495-83645514 None:intergenic 30.0%
CTATGTTCATGTTTCTTGTT+AGG + chr7.4:83643429-83643448 MS.gene49900:intron 30.0%
CTCATTTCATCAAGAACTTT+AGG - chr7.4:83645161-83645180 None:intergenic 30.0%
CTGCAAAAGACACAATTTAA+TGG - chr7.4:83645567-83645586 None:intergenic 30.0%
GATAGTCACTTCTTGATATT+TGG + chr7.4:83646531-83646550 MS.gene49900:CDS 30.0%
GTCAATGTTTCATACTTCAT+AGG + chr7.4:83646204-83646223 MS.gene49900:intron 30.0%
GTGGATCATGATAAAGAATT+GGG - chr7.4:83646376-83646395 None:intergenic 30.0%
TAACATTTAATCCATGGAGA+TGG + chr7.4:83646396-83646415 MS.gene49900:CDS 30.0%
TGAACAATTACACAATCCTA+GGG - chr7.4:83645827-83645846 None:intergenic 30.0%
TTAAAGAACTCTGTCATGAA+AGG - chr7.4:83644526-83644545 None:intergenic 30.0%
TTCCATCATCATCATTTGAT+TGG + chr7.4:83643371-83643390 MS.gene49900:intron 30.0%
TTGAAGCTTCAACAAAATCA+CGG + chr7.4:83644363-83644382 MS.gene49900:intron 30.0%
TTGAGATCATTGCAATCAAT+AGG - chr7.4:83645322-83645341 None:intergenic 30.0%
! AACCAATCAAATGATGATGA+TGG - chr7.4:83643376-83643395 None:intergenic 30.0%
! AAGATATCTAACATGGATTG+AGG - chr7.4:83644066-83644085 None:intergenic 30.0%
! AAGCTGATTTCTGATTAAAG+TGG - chr7.4:83644166-83644185 None:intergenic 30.0%
! AGATATCTAACATGGATTGA+GGG - chr7.4:83644065-83644084 None:intergenic 30.0%
! AGCTGATTTCTGATTAAAGT+GGG - chr7.4:83644165-83644184 None:intergenic 30.0%
! ATACTTTCAATAGGAAGTGT+CGG - chr7.4:83646040-83646059 None:intergenic 30.0%
! CATCATTTGATTGGTTACTT+TGG + chr7.4:83643380-83643399 MS.gene49900:intron 30.0%
! CATTAAATTGTGTCTTTTGC+AGG + chr7.4:83645565-83645584 MS.gene49900:intron 30.0%
! CTCATGAACTCATCAATTTT+AGG - chr7.4:83644192-83644211 None:intergenic 30.0%
! TAGGTTGAAAAATTAGGTAG+TGG + chr7.4:83645977-83645996 MS.gene49900:intron 30.0%
!! CTACCTAATTTTTCAACCTA+TGG - chr7.4:83645977-83645996 None:intergenic 30.0%
!! CTTTTGGTAATTTACCCTAT+TGG + chr7.4:83643877-83643896 MS.gene49900:intron 30.0%
!! GAGTTCTTTAAGCTTGTTTT+AGG + chr7.4:83644535-83644554 MS.gene49900:CDS 30.0%
!! GGATTTTATTGAAGCTCTAA+AGG + chr7.4:83643655-83643674 MS.gene49900:intron 30.0%
!!! AGCATTTTGCTATTAGAGAA+AGG + chr7.4:83645281-83645300 MS.gene49900:CDS 30.0%
ACTCTTATGTGTAGTCCATT+TGG - chr7.4:83646811-83646830 None:intergenic 35.0%
AGTCACTTCTTGATATTTGG+AGG + chr7.4:83646534-83646553 MS.gene49900:CDS 35.0%
ATAAATCATAGTGCCATGCA+AGG - chr7.4:83643563-83643582 None:intergenic 35.0%
ATCTCATTGATGCTATCAAG+AGG + chr7.4:83646257-83646276 MS.gene49900:intron 35.0%
ATGCTATCAAGAGGGTTAAT+TGG + chr7.4:83646266-83646285 MS.gene49900:intron 35.0%
ATGCTTAGTTGTTTGATGAG+AGG + chr7.4:83645011-83645030 MS.gene49900:CDS 35.0%
CATGACATGGAATTAAATGG+TGG + chr7.4:83645647-83645666 MS.gene49900:intron 35.0%
GAGAAAAACAACTCATGACA+TGG + chr7.4:83645634-83645653 MS.gene49900:CDS 35.0%
GAGAACTCATGTAAGTGATT+GGG + chr7.4:83644209-83644228 MS.gene49900:CDS 35.0%
GCTATCTTCATTGCAATTCT+AGG + chr7.4:83643137-83643156 MS.gene49900:CDS 35.0%
GGATCCATTGATACAATTGT+AGG - chr7.4:83643988-83644007 None:intergenic 35.0%
GGATTGTGTAATTGTTCACA+TGG + chr7.4:83645829-83645848 MS.gene49900:intron 35.0%
GTGAACAATTACACAATCCT+AGG - chr7.4:83645828-83645847 None:intergenic 35.0%
GTGAGTCTAACAAAATTACG+GGG + chr7.4:83644308-83644327 MS.gene49900:intron 35.0%
GTGTATGACAATGACATTGA+AGG + chr7.4:83646062-83646081 MS.gene49900:intron 35.0%
GTGTATGACAATGACTTTGA+AGG + chr7.4:83646086-83646105 MS.gene49900:intron 35.0%
TAAATCATAGTGCCATGCAA+GGG - chr7.4:83643562-83643581 None:intergenic 35.0%
TACAAAGTAGTGCAAGAAAG+TGG - chr7.4:83646607-83646626 None:intergenic 35.0%
TCTCATTGATGCTATCAAGA+GGG + chr7.4:83646258-83646277 MS.gene49900:intron 35.0%
TGAAATGAAAAGGGTCTAGT+TGG - chr7.4:83645877-83645896 None:intergenic 35.0%
TGAGAACTCATGTAAGTGAT+TGG + chr7.4:83644208-83644227 MS.gene49900:CDS 35.0%
TGCTTAGTTGTTTGATGAGA+GGG + chr7.4:83645012-83645031 MS.gene49900:CDS 35.0%
TTGCAATCAATAGGATCTTC+TGG - chr7.4:83645313-83645332 None:intergenic 35.0%
! ACTTTTGTGTATGACAGGTA+TGG + chr7.4:83643931-83643950 MS.gene49900:intron 35.0%
! CCATTGAATGTCTAAAATCG+CGG - chr7.4:83644414-83644433 None:intergenic 35.0%
! CTCCATGGATTAAATGTTAG+TGG - chr7.4:83646395-83646414 None:intergenic 35.0%
! CTTTTGTGTATGACAGGTAT+GGG + chr7.4:83643932-83643951 MS.gene49900:intron 35.0%
! GGTCCATAGGTTGAAAAATT+AGG + chr7.4:83645971-83645990 MS.gene49900:intron 35.0%
! GTAGCTTCTAAAAATTACGG+TGG - chr7.4:83644705-83644724 None:intergenic 35.0%
! TGAGTAAGGTACTTGAAGAA+AGG + chr7.4:83644961-83644980 MS.gene49900:CDS 35.0%
! TGGAAAGATGCATCTTTTTC+TGG - chr7.4:83645917-83645936 None:intergenic 35.0%
! TTGATTGATTCTTGTAGGCA+AGG + chr7.4:83644919-83644938 MS.gene49900:intron 35.0%
! TTTGAAGCAAATTGCTGGTA+TGG + chr7.4:83644480-83644499 MS.gene49900:CDS 35.0%
!! AGCGACATTAGTGTTTTTGA+CGG - chr7.4:83645397-83645416 None:intergenic 35.0%
!! GTATCACTTTTGTGTATGAC+AGG + chr7.4:83643926-83643945 MS.gene49900:intron 35.0%
!! TCAGTTGTTTCTCCAAAAAC+AGG - chr7.4:83643257-83643276 None:intergenic 35.0%
!! TCATCTTTGAAGCAAATTGC+TGG + chr7.4:83644475-83644494 MS.gene49900:CDS 35.0%
!!! TAAATGGTGGGTTTTTTGAG+TGG + chr7.4:83645660-83645679 MS.gene49900:intron 35.0%
AACCAAATCAAGACGACACT+GGG + chr7.4:83643634-83643653 MS.gene49900:intron 40.0%
ACATATATCCTCCACCCTTT+AGG - chr7.4:83646329-83646348 None:intergenic 40.0%
ATGATATGGTCATGGTCCAT+AGG + chr7.4:83645958-83645977 MS.gene49900:intron 40.0%
ATTTAATCCATGGAGATGGC+TGG + chr7.4:83646400-83646419 MS.gene49900:CDS 40.0%
CACTTCTTGATATTTGGAGG+TGG + chr7.4:83646537-83646556 MS.gene49900:CDS 40.0%
GAGGTAAGATACAGAAGGAA+AGG + chr7.4:83643206-83643225 MS.gene49900:CDS 40.0%
GGAATGAGGTAAGATACAGA+AGG + chr7.4:83643201-83643220 MS.gene49900:CDS 40.0%
TAACCAAATCAAGACGACAC+TGG + chr7.4:83643633-83643652 MS.gene49900:intron 40.0%
TAAGCGTGTGTTTAGATGAG+CGG + chr7.4:83644647-83644666 MS.gene49900:intron 40.0%
TGTAACATTGCAGCTGTTCA+TGG + chr7.4:83644093-83644112 MS.gene49900:CDS 40.0%
TTGTGCCCGGAAGATTAATA+GGG - chr7.4:83644573-83644592 None:intergenic 40.0%
TTTGATCAACTTCCCTTGCA+TGG + chr7.4:83643547-83643566 MS.gene49900:intron 40.0%
TTTGTGCCCGGAAGATTAAT+AGG - chr7.4:83644574-83644593 None:intergenic 40.0%
! AAACTATCGTCGTGGATTAC+AGG + chr7.4:83644591-83644610 MS.gene49900:CDS 40.0%
! CAGGCTATTTGGTTCCTAAA+GGG + chr7.4:83646312-83646331 MS.gene49900:intron 40.0%
! CCGCGATTTTAGACATTCAA+TGG + chr7.4:83644411-83644430 MS.gene49900:intron 40.0%
! CTTGATGAAATGAGGGTATG+TGG + chr7.4:83645167-83645186 MS.gene49900:intron 40.0%
! GGAGCTTCTAAAAATTACGG+TGG - chr7.4:83644756-83644775 None:intergenic 40.0%
! GGGAGTGGTTTTTATGAACT+TGG + chr7.4:83643451-83643470 MS.gene49900:intron 40.0%
! TCAGGCTATTTGGTTCCTAA+AGG + chr7.4:83646311-83646330 MS.gene49900:intron 40.0%
!! ATTAGGTAGTGGGCATCTTA+AGG + chr7.4:83645988-83646007 MS.gene49900:intron 40.0%
!! TAGTTGGAGTGTTGAAAGAG+TGG - chr7.4:83645861-83645880 None:intergenic 40.0%
!! TTTGCTCTGCTCTTTTGAAG+TGG + chr7.4:83643180-83643199 MS.gene49900:CDS 40.0%
!!! TGCTCTTTTGAAGTGGAATG+AGG + chr7.4:83643187-83643206 MS.gene49900:CDS 40.0%
ACAATGTCCAGGAAAGGAGT+TGG + chr7.4:83646566-83646585 MS.gene49900:CDS 45.0%
AGAAGGAAAGGTTTGCCACA+AGG + chr7.4:83643218-83643237 MS.gene49900:CDS 45.0%
AGGTTTGCCACAAGGAACAA+TGG + chr7.4:83643226-83643245 MS.gene49900:CDS 45.0%
ATCCCAGTGTCGTCTTGATT+TGG - chr7.4:83643639-83643658 None:intergenic 45.0%
CAATGTCCAGGAAAGGAGTT+GGG + chr7.4:83646567-83646586 MS.gene49900:CDS 45.0%
CACTAGACAATGTCCAGGAA+AGG + chr7.4:83646560-83646579 MS.gene49900:CDS 45.0%
CATGTTTCTTGTTAGGGGAG+TGG + chr7.4:83643436-83643455 MS.gene49900:intron 45.0%
CATTGCAGATGGGAAGAAGT+AGG + chr7.4:83646748-83646767 MS.gene49900:intron 45.0%
CCACTCACAAGTACATGAGA+GGG + chr7.4:83644118-83644137 MS.gene49900:CDS 45.0%
CTCCCTCCCTATTAATCTTC+CGG + chr7.4:83644564-83644583 MS.gene49900:CDS 45.0%
GCAATGATCTCAAGTCCATG+AGG + chr7.4:83645329-83645348 MS.gene49900:CDS 45.0%
GGTTTGCCACAAGGAACAAT+GGG + chr7.4:83643227-83643246 MS.gene49900:CDS 45.0%
GTTTGCCACAAGGAACAATG+GGG + chr7.4:83643228-83643247 MS.gene49900:CDS 45.0%
TCCACTCACAAGTACATGAG+AGG + chr7.4:83644117-83644136 MS.gene49900:CDS 45.0%
TCCCTCCCTATTAATCTTCC+GGG + chr7.4:83644565-83644584 MS.gene49900:CDS 45.0%
TCGTGAGAACGAGAAAGACT+TGG - chr7.4:83645437-83645456 None:intergenic 45.0%
TTACTAACCAGCCATCTCCA+TGG - chr7.4:83646410-83646429 None:intergenic 45.0%
! ATTTGGTTCCTAAAGGGTGG+AGG + chr7.4:83646318-83646337 MS.gene49900:CDS 45.0%
! GAAGGAAAAGGGTTTGTTCC+AGG + chr7.4:83644036-83644055 MS.gene49900:CDS 45.0%
! GCTATTTGGTTCCTAAAGGG+TGG + chr7.4:83646315-83646334 MS.gene49900:CDS 45.0%
!! AACATGGATTGAGGGTATCC+TGG - chr7.4:83644057-83644076 None:intergenic 45.0%
CCCTCTCATGTACTTGTGAG+TGG - chr7.4:83644121-83644140 None:intergenic 50.0%
CCTAGAGTTGTGGCACCAAA+TGG + chr7.4:83646793-83646812 MS.gene49900:CDS 50.0%
GCCCGGAAGATTAATAGGGA+GGG - chr7.4:83644569-83644588 None:intergenic 50.0%
GCTATTCCCAACTCCTTTCC+TGG - chr7.4:83646576-83646595 None:intergenic 50.0%
TGCAGATGGGAAGAAGTAGG+AGG + chr7.4:83646751-83646770 MS.gene49900:intron 50.0%
TGCCCGGAAGATTAATAGGG+AGG - chr7.4:83644570-83644589 None:intergenic 50.0%
! ACAATGGGGTGGCCTGTTTT+TGG + chr7.4:83643242-83643261 MS.gene49900:CDS 50.0%
!! CCATTTGGTGCCACAACTCT+AGG - chr7.4:83646796-83646815 None:intergenic 50.0%
GCGTGTGTTTAGATGAGCGG+TGG + chr7.4:83644650-83644669 MS.gene49900:intron 55.0%
GGTGGCACTAGACAATGTCC+AGG + chr7.4:83646555-83646574 MS.gene49900:CDS 55.0%
GTCCATGAGGTTTACTCGCG+CGG + chr7.4:83645342-83645361 MS.gene49900:CDS 55.0%
TACCGCGCGAGTAAACCTCA+TGG - chr7.4:83645347-83645366 None:intergenic 55.0%
TGCCACAAGGAACAATGGGG+TGG + chr7.4:83643231-83643250 MS.gene49900:CDS 55.0%
! CCACGACGATAGTTTGTGCC+CGG - chr7.4:83644586-83644605 None:intergenic 55.0%
CCGGGCACAAACTATCGTCG+TGG + chr7.4:83644583-83644602 MS.gene49900:CDS 60.0%
GGCCACCCCATTGTTCCTTG+TGG - chr7.4:83643236-83643255 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 83643134 83646843 83643134 ID=MS.gene49900
chr7.4 mRNA 83643134 83646843 83643134 ID=MS.gene49900.t1;Parent=MS.gene49900
chr7.4 exon 83643134 83643321 83643134 ID=MS.gene49900.t1.exon1;Parent=MS.gene49900.t1
chr7.4 CDS 83643134 83643321 83643134 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83643948 83644269 83643948 ID=MS.gene49900.t1.exon2;Parent=MS.gene49900.t1
chr7.4 CDS 83643948 83644269 83643948 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83644463 83644612 83644463 ID=MS.gene49900.t1.exon3;Parent=MS.gene49900.t1
chr7.4 CDS 83644463 83644612 83644463 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83644936 83645181 83644936 ID=MS.gene49900.t1.exon4;Parent=MS.gene49900.t1
chr7.4 CDS 83644936 83645181 83644936 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83645277 83645363 83645277 ID=MS.gene49900.t1.exon5;Parent=MS.gene49900.t1
chr7.4 CDS 83645277 83645363 83645277 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83645587 83645665 83645587 ID=MS.gene49900.t1.exon6;Parent=MS.gene49900.t1
chr7.4 CDS 83645587 83645665 83645587 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83646315 83646421 83646315 ID=MS.gene49900.t1.exon7;Parent=MS.gene49900.t1
chr7.4 CDS 83646315 83646421 83646315 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83646513 83646637 83646513 ID=MS.gene49900.t1.exon8;Parent=MS.gene49900.t1
chr7.4 CDS 83646513 83646637 83646513 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
chr7.4 exon 83646756 83646843 83646756 ID=MS.gene49900.t1.exon9;Parent=MS.gene49900.t1
chr7.4 CDS 83646756 83646843 83646756 ID=cds.MS.gene49900.t1;Parent=MS.gene49900.t1
Gene Sequence

>MS.gene49900

ATGGCTATCTTCATTGCAATTCTAGGTTTTTTCTTTGTGTTCTGTTTTTGCTCTGCTCTTTTGAAGTGGAATGAGGTAAGATACAGAAGGAAAGGTTTGCCACAAGGAACAATGGGGTGGCCTGTTTTTGGAGAAACAACTGAGTTTCTTAAACAAGGTCCTAACTTCATGAAAAATCAAAGATCAAGGTAAAATCATAAACAACTTCACATGTTATTTTTTTGTTCTTTTTTGTTTTTCCATCATCATCATTTGATTGGTTACTTTGGTGCATGTGTTCATGTTTCTAATGTTCCTATGTTCATGTTTCTTGTTAGGGGAGTGGTTTTTATGAACTTGGTTTTTAAAGACTATTCCATTGGTTTCATTTTCTTTATATTTTCTTGATAAAAAAAAAAAAAAAAAGAAGCTACTTTGATCAACTTCCCTTGCATGGCACTATGATTTATCACATTAATTAATTGCCCTTTTGAATGTATTACATAAATCATGGAGTGTTTAACCAAATCAAGACGACACTGGGATTTTATTGAAGCTCTAAAGGTAAAAAAAATCAAATATTTTTTCCAAAATTTCGGTAATATATGTGATTATGTCAAATTCACCGTTAGTCCAAAATGACATTTACATCATGAAAGTGTGAATATGAGAAACTAATGTTAATTGGACAAAACATTTTTTTTACTAAGATTTTCTCAAATGAGTTAAACTAAGTGTGGGATAAAAATTATTCATTCATGTACCTTTTGGTAATTTACCCTATTGGTTATCATTGTAACTTTTTTCTTTTTGGTATCACTTTTGTGTATGACAGGTATGGGAATTTTTTCAAATCTCACATATTAGGATGTCCTACAATTGTATCAATGGATCCAGAACTAAATAGATACATATTGATGAATGAAGGAAAAGGGTTTGTTCCAGGATACCCTCAATCCATGTTAGATATCTTAGGAAAATGTAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGACATTGCTTTCAATCATTAGTCCCACTTTAATCAGAAATCAGCTTTTACCTAAAATTGATGAGTTCATGAGAACTCATGTAAGTGATTGGGATAACAAAATCATCAACATTCAAGACAAAACTAAAGAGGTTTGTACTTTGTAACACTCTTCATGTTAATATTGATAGTGAGTCTAACAAAATTACGGGGTAAAATTGTAAATATTTGCAAAATACTACGTTTTGAAGCTTCAACAAAATCACGGTGTCACTCTGATTTTGTCAATTTCACCGCGATTTTAGACATTCAATGGACACGTATTCACAAATGTTTTTTTAACAGATGGCATTTCTATCATCTTTGAAGCAAATTGCTGGTATGGAATCAAGCTCAATTTCTCAGCCTTTCATGACAGAGTTCTTTAAGCTTGTTTTAGGAACTCTCTCCCTCCCTATTAATCTTCCGGGCACAAACTATCGTCGTGGATTACAGGTACGATAGCCCTTCGTCTTTTCTAATTAACGTCTAAGCGTGTGTTTAGATGAGCGGTGGACAAGTGCCACGATAAATATAGAGTTTTACCACCGTAATTTTTAGAAGCTACAAATTACAATATGTAACTTTTAGTTTTACCACCGTAATTTTTAGAAGCTCCAATGTGTAACTTTATTTAAGTCCATCATTCTTTTTTTTTGGTTGAAAATTTAGGCCATGTTTTGTGCAAATAAAGATGTATAATACCAATTATTTGTTCATGTTGCTACTAATTTTGATTACTTAGAAAATGATAGAATATATTTGATTGATTCTTGTAGGCAAGGAAAAGTATTATTAACATTTTGAGTAAGGTACTTGAAGAAAGGAGAGCATCAAAAGAAATCTATGAAGACATGCTTAGTTGTTTGATGAGAGGGAATGATAATAAAAGCAAACTAAATGATGAAGAACTTATTGATCTAATCATTACAATTATGTATTCTGGTTATGAAACTATTTCAACTACATCAATGATGGCTGTAAAGTACTTGCATGATCATCCTAAAGTTCTTGATGAAATGAGGGTATGTGGAAAAGTTATCATTATTGCTTTTTTTTTTATTTGAGTTTTTTTTTTATTATAAAGAGTGTGATAATATTGAATATTGAAATCTTGCAGAAAGAGCATTTTGCTATTAGAGAAAGGAAAAAGCCAGAAGATCCTATTGATTGCAATGATCTCAAGTCCATGAGGTTTACTCGCGCGGTAAGTAGCGTTGTAATATCTTTTCATGAACCGTCAAAAACACTAATGTCGCTCTCTAAAATTAGAAGTTCCAAGTCTTTCTCGTTCTCACGACTAAGACAATGTCTTAGACGTTACTATAAGAAAGACCGTGAACTTCTATTTTCGATAGTCGACGACAATGATCATTACAATTTTAAGTGCTATTAAGTTTGATTTTTCCATTAAATTGTGTCTTTTGCAGGTGATTTTTGAGACATCGAGATTAGCTACAATAGTTAATGGAGTTCTGAGAAAAACAACTCATGACATGGAATTAAATGGTGGGTTTTTTGAGTGGCCTATTTAATTTCTCTAGCTCTTATGTATTTATGTTGATGGGCTCAAGAAAAATGTTTTTGACTTTTTTGGTTTCTTTCAGCCACTTTTTCAGTATCAAAAAAGTTTGTTAAACAGTAGCCAGAAAAAGAAATTCATTCATCCCTAGGATTGTGTAATTGTTCACATGGCATTGACCACTCTTTCAACACTCCAACTAGACCCTTTTCATTTCACTATGTAAAAAAGTTTACCAGAAAAAGATGCATCTTTCCAAATTACTTAGATTACTTTAATATGATATGGTCATGGTCCATAGGTTGAAAAATTAGGTAGTGGGCATCTTAAGGAATTTACAAAATAGTTATGTGCATCACCGACACTTCCTATTGAAAGTATAAGTGTATGACAATGACATTGAAGGAGTGTATGACAATGACTTTGAAGGCATGTCTGTTGTTCGACATATATTAGTGTCTAACAACTACATAATACTAACATATGTGGTTACATTAAATTATTCTATTTCCATATTTTTTTGGTGTCAATGTTTCATACTTCATAGGTTCTTACTATTCATAATAGCATGTGTGAGCATCTCATTGATGCTATCAAGAGGGTTAATTGGATCTATATTTGTAAATGATTTTTCAGGCTATTTGGTTCCTAAAGGGTGGAGGATATATGTATATACTAGAGAGATAAATTATGACCCAATTCTTTATCATGATCCACTAACATTTAATCCATGGAGATGGCTGGTTAGTAACAATCTCTTGTTTTTATTTTGTTATAAAAAACATATCATGAAAATACTAAGAACCATAATTAACAAACAACTTGAAAATGCAGGGAAATAATCTAGAGTCAGATAGTCACTTCTTGATATTTGGAGGTGGCACTAGACAATGTCCAGGAAAGGAGTTGGGAATAGCAGAAATTTCCACTTTCTTGCACTACTTTGTAACTAGATACAGGTGAGAGTAATTATTTGCCTATTTCATATGACTAAATTTTCATTTTTGTTTTTGAAAATAGAATATATTAATTGCAATAGAGGTTTTCTGACATGTGATTTTTAATGTTACATTGCAGATGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTGTGGCACCAAATGGACTACACATAAGAGTTTCATCTTATTAA

Protein sequence

>MS.gene49900.t1

MAIFIAILGFFFVFCFCSALLKWNEVRYRRKGLPQGTMGWPVFGETTEFLKQGPNFMKNQRSRYGNFFKSHILGCPTIVSMDPELNRYILMNEGKGFVPGYPQSMLDILGKCNIAAVHGSTHKYMRGTLLSIISPTLIRNQLLPKIDEFMRTHVSDWDNKIINIQDKTKEMAFLSSLKQIAGMESSSISQPFMTEFFKLVLGTLSLPINLPGTNYRRGLQARKSIINILSKVLEERRASKEIYEDMLSCLMRGNDNKSKLNDEELIDLIITIMYSGYETISTTSMMAVKYLHDHPKVLDEMRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLVPKGWRIYVYTREINYDPILYHDPLTFNPWRWLGNNLESDSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSY