Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004401.t1 | XP_003593899.2 | 96 | 325 | 9 | 1 | 1 | 321 | 1 | 325 | 4.10E-169 | 604 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004401.t1 | Q9SEL7 | 64.3 | 286 | 93 | 3 | 41 | 321 | 42 | 323 | 1.2e-95 | 351.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004401.t1 | G7IP65 | 96.0 | 325 | 9 | 1 | 1 | 321 | 1 | 325 | 3.0e-169 | 604.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene030057 | MS.gene004401 | PPI |
MS.gene062351 | MS.gene004401 | PPI |
MS.gene038363 | MS.gene004401 | PPI |
MS.gene017129 | MS.gene004401 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004401.t1 | MTR_2g019140 | 96.000 | 325 | 9 | 1 | 1 | 321 | 1 | 325 | 0.0 | 637 |
MS.gene004401.t1 | MTR_2g019140 | 95.816 | 239 | 6 | 1 | 1 | 235 | 1 | 239 | 2.11e-168 | 468 |
MS.gene004401.t1 | MTR_6g011810 | 48.085 | 235 | 110 | 4 | 82 | 314 | 126 | 350 | 6.38e-60 | 198 |
MS.gene004401.t1 | MTR_6g007030 | 42.321 | 293 | 141 | 9 | 27 | 314 | 54 | 323 | 5.14e-59 | 196 |
MS.gene004401.t1 | MTR_7g113170 | 36.517 | 178 | 103 | 5 | 129 | 305 | 147 | 315 | 3.69e-22 | 95.9 |
MS.gene004401.t1 | MTR_7g113170 | 36.517 | 178 | 103 | 5 | 129 | 305 | 147 | 315 | 4.34e-22 | 96.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004401.t1 | AT4G18370 | 73.305 | 236 | 59 | 2 | 86 | 321 | 92 | 323 | 1.41e-124 | 360 |
MS.gene004401.t1 | AT4G18370 | 71.751 | 177 | 46 | 2 | 86 | 262 | 92 | 264 | 6.21e-87 | 262 |
MS.gene004401.t1 | AT4G18370 | 70.270 | 148 | 40 | 2 | 86 | 233 | 92 | 235 | 6.10e-70 | 218 |
MS.gene004401.t1 | AT5G39830 | 46.835 | 237 | 108 | 5 | 82 | 313 | 116 | 339 | 2.70e-59 | 197 |
MS.gene004401.t1 | AT3G27925 | 46.444 | 239 | 106 | 6 | 77 | 314 | 113 | 330 | 1.72e-57 | 192 |
MS.gene004401.t1 | AT3G27925 | 46.444 | 239 | 106 | 6 | 77 | 314 | 113 | 330 | 1.72e-57 | 192 |
MS.gene004401.t1 | AT5G39830 | 43.038 | 237 | 103 | 5 | 82 | 313 | 116 | 325 | 2.60e-51 | 175 |
MS.gene004401.t1 | AT5G27660 | 37.288 | 177 | 99 | 6 | 129 | 303 | 149 | 315 | 2.26e-19 | 88.6 |
MS.gene004401.t1 | AT5G27660 | 37.288 | 177 | 99 | 6 | 129 | 303 | 144 | 310 | 2.71e-19 | 88.2 |
Find 88 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACCTTGTGCATTTGTTTC+AGG | 0.129362 | 2.4:+67272994 | MS.gene004401:CDS |
AGTCAATTCAATGTCTTTAA+TGG | 0.134990 | 2.4:-67274053 | None:intergenic |
TCCAGGGAAGGGAAAATAAT+TGG | 0.154649 | 2.4:+67274913 | MS.gene004401:CDS |
GAAATAAAGCCTGTTGTTAT+TGG | 0.182109 | 2.4:+67276905 | MS.gene004401:CDS |
GGCTTCATTTGGGATAAATT+TGG | 0.201587 | 2.4:+67274151 | MS.gene004401:CDS |
CAAGTCTTGTAGTTGCTTCT+TGG | 0.214119 | 2.4:+67272891 | MS.gene004401:CDS |
CTTTGATAGCCCCTCCATTT+GGG | 0.261671 | 2.4:-67277295 | None:intergenic |
TTTAGCTACAACATGGTAAT+TGG | 0.266241 | 2.4:-67274732 | None:intergenic |
GACTTCATTAGAAGAGGTTT+TGG | 0.274618 | 2.4:-67274083 | None:intergenic |
TTTCAAAACCTATTAGTATA+AGG | 0.279957 | 2.4:-67278640 | None:intergenic |
CCTTTGATAGCCCCTCCATT+TGG | 0.294286 | 2.4:-67277296 | None:intergenic |
ATGCAGGTGGTCAGTGGTTT+AGG | 0.298156 | 2.4:+67277257 | MS.gene004401:intron |
GTACCATCCCTTATTGTATA+TGG | 0.304932 | 2.4:+67278613 | MS.gene004401:CDS |
TTTGCCATTGGGAATCCTTA+TGG | 0.306916 | 2.4:+67276962 | MS.gene004401:CDS |
ATGGAACACCTTATACTAAT+AGG | 0.308611 | 2.4:+67278632 | MS.gene004401:CDS |
GAGAGGGAAAGAGGTTCATT+TGG | 0.325824 | 2.4:-67272784 | None:intergenic |
GCACTGGTTCAGGCTTCATT+TGG | 0.338673 | 2.4:+67274140 | MS.gene004401:CDS |
AAAGTGGAAGGCACTGGTTC+AGG | 0.378478 | 2.4:+67274130 | MS.gene004401:CDS |
CACTGGTTCAGGCTTCATTT+GGG | 0.391449 | 2.4:+67274141 | MS.gene004401:CDS |
CCAGGGAAGGGAAAATAATT+GGG | 0.392744 | 2.4:+67274914 | MS.gene004401:CDS |
GACAGAGTTGCTTTGCCATT+GGG | 0.398813 | 2.4:+67276951 | MS.gene004401:CDS |
GACTCTCATGGCCATGTTGT+TGG | 0.403469 | 2.4:+67278264 | MS.gene004401:CDS |
TATTTGCAGGTTGATGTTGA+TGG | 0.405637 | 2.4:+67276878 | MS.gene004401:intron |
AAGGTGTTCCATATACAATA+AGG | 0.408680 | 2.4:-67278621 | None:intergenic |
TAGTGGTTTACAACGTTGTA+AGG | 0.411713 | 2.4:+67274769 | MS.gene004401:CDS |
CGGATGTTAACAGGAAATTC+AGG | 0.411871 | 2.4:+67278228 | MS.gene004401:intron |
TATGAGAATACTCTCACAAC+AGG | 0.425005 | 2.4:+67276986 | MS.gene004401:CDS |
AGAGAAAACATTGTGATGAT+TGG | 0.430574 | 2.4:-67272761 | None:intergenic |
AAGACTTGAACTGAAGACTA+TGG | 0.430823 | 2.4:-67272876 | None:intergenic |
TTAGATTCACCAATAACAAC+AGG | 0.438438 | 2.4:-67276914 | None:intergenic |
GTTGTGTTGAATTGAAATTA+AGG | 0.445017 | 2.4:-67272922 | None:intergenic |
GGTGGGAAGGGTCTTTGTTG+AGG | 0.458920 | 2.4:-67272825 | None:intergenic |
TCAGGTACCGGAGCTTCATC+AGG | 0.470733 | 2.4:+67278550 | MS.gene004401:intron |
AGGTGTTCCATATACAATAA+GGG | 0.471453 | 2.4:-67278620 | None:intergenic |
ATTACCTTTCCTTGTGAAGG+TGG | 0.475479 | 2.4:-67278298 | None:intergenic |
CCTGGAAAAGTTATTCCCAT+TGG | 0.481148 | 2.4:-67274896 | None:intergenic |
CGCGAGATACCTTCCCCAAA+TGG | 0.481655 | 2.4:+67277281 | MS.gene004401:CDS |
TGAGGATGAAGATGCAAAAG+TGG | 0.487615 | 2.4:+67274114 | MS.gene004401:CDS |
TATATTACCTTTCCTTGTGA+AGG | 0.491019 | 2.4:-67278301 | None:intergenic |
AGTAGCTGTAACAGTGGTGG+TGG | 0.505438 | 2.4:-67272843 | None:intergenic |
TGTAACAGTGGTGGTGGGAA+GGG | 0.505477 | 2.4:-67272837 | None:intergenic |
ATGAGTAGTTAGCGTTGGAG+AGG | 0.508532 | 2.4:-67272801 | None:intergenic |
TTAGCGTTGGAGAGGGAAAG+AGG | 0.508546 | 2.4:-67272793 | None:intergenic |
CTGTAACAGTGGTGGTGGGA+AGG | 0.510652 | 2.4:-67272838 | None:intergenic |
GGACAGAGTTGCTTTGCCAT+TGG | 0.512294 | 2.4:+67276950 | MS.gene004401:CDS |
TATTCCCATTGGCATCAACT+AGG | 0.514434 | 2.4:-67274885 | None:intergenic |
TAGCATGACTTCATTAGAAG+AGG | 0.522603 | 2.4:-67274089 | None:intergenic |
AGAGTATTCTCATATCCATA+AGG | 0.524491 | 2.4:-67276977 | None:intergenic |
GAGGAATGAGTAGTTAGCGT+TGG | 0.524538 | 2.4:-67272806 | None:intergenic |
GTTAACTCCTGATGAAGCTC+CGG | 0.541628 | 2.4:-67278557 | None:intergenic |
ACTGATGCAGCTATTAATGC+AGG | 0.543845 | 2.4:+67277329 | MS.gene004401:CDS |
ACTTCTAATTACAGAGTCGA+TGG | 0.545161 | 2.4:-67278590 | None:intergenic |
AGCTGTTGTGAAAGTGAAAG+TGG | 0.549859 | 2.4:-67272944 | None:intergenic |
TGAGTAGTTAGCGTTGGAGA+GGG | 0.552406 | 2.4:-67272800 | None:intergenic |
GGACCATTGATTGACTCTCA+TGG | 0.566441 | 2.4:+67278252 | MS.gene004401:CDS |
TTTGATAGCCCCTCCATTTG+GGG | 0.566803 | 2.4:-67277294 | None:intergenic |
TGGCCATGAGAGTCAATCAA+TGG | 0.568108 | 2.4:-67278255 | None:intergenic |
ATATGATCTAGCTGTTCTGA+AGG | 0.569824 | 2.4:+67274948 | MS.gene004401:CDS |
AGAACAGCTAGATCATATGA+TGG | 0.573622 | 2.4:-67274943 | None:intergenic |
CCAAATGGAGGGGCTATCAA+AGG | 0.574726 | 2.4:+67277296 | MS.gene004401:CDS |
AGATACCTTCCCCAAATGGA+GGG | 0.575115 | 2.4:+67277285 | MS.gene004401:CDS |
ATAGCCCCTCCATTTGGGGA+AGG | 0.577157 | 2.4:-67277290 | None:intergenic |
GATGCAAAAGTGGAAGGCAC+TGG | 0.579458 | 2.4:+67274124 | MS.gene004401:CDS |
GAATCTAAGAATTTACATGT+TGG | 0.582777 | 2.4:+67276929 | MS.gene004401:CDS |
ACGTTGTAAACCACTAGTAT+CGG | 0.589338 | 2.4:-67274762 | None:intergenic |
GAGATACCTTCCCCAAATGG+AGG | 0.591441 | 2.4:+67277284 | MS.gene004401:CDS |
TAAATTATGCAGGTGGTCAG+TGG | 0.593859 | 2.4:+67277251 | MS.gene004401:intron |
ACAGCCACCTTCACAAGGAA+AGG | 0.596510 | 2.4:+67278294 | MS.gene004401:CDS |
GATGAAGATGCAAAAGTGGA+AGG | 0.620131 | 2.4:+67274118 | MS.gene004401:CDS |
TCTTTAATGGAAACAACAGA+TGG | 0.624656 | 2.4:-67274040 | None:intergenic |
CTGTGTTTACTCCAACAACA+TGG | 0.626621 | 2.4:-67278275 | None:intergenic |
CTTCTAATTACAGAGTCGAT+GGG | 0.626746 | 2.4:-67278589 | None:intergenic |
TAATGAAGTCATGCTAGATG+AGG | 0.628611 | 2.4:+67274096 | MS.gene004401:CDS |
CTTAGTAGCTGTAACAGTGG+TGG | 0.631185 | 2.4:-67272846 | None:intergenic |
GTTCCATATACAATAAGGGA+TGG | 0.636651 | 2.4:-67278616 | None:intergenic |
TAAACACAGCCACCTTCACA+AGG | 0.639628 | 2.4:+67278289 | MS.gene004401:CDS |
ATGAGAATACTCTCACAACA+GGG | 0.643517 | 2.4:+67276987 | MS.gene004401:CDS |
GATACCTTCCCCAAATGGAG+GGG | 0.644193 | 2.4:+67277286 | MS.gene004401:CDS |
GTAGCTGTAACAGTGGTGGT+GGG | 0.650253 | 2.4:-67272842 | None:intergenic |
TCGCTTAGTAGCTGTAACAG+TGG | 0.652682 | 2.4:-67272849 | None:intergenic |
TAGCTAGTTTAGCTACAACA+TGG | 0.693427 | 2.4:-67274739 | None:intergenic |
ATATCCATAAGGATTCCCAA+TGG | 0.696972 | 2.4:-67276966 | None:intergenic |
AAACTAGCTACCGATACTAG+TGG | 0.701856 | 2.4:+67274752 | MS.gene004401:CDS |
AAACCTGAAACAAATGCACA+AGG | 0.703790 | 2.4:-67272997 | None:intergenic |
ATGTTAACAGGAAATTCAGG+CGG | 0.717135 | 2.4:+67278231 | MS.gene004401:intron |
TGAGAATACTCTCACAACAG+GGG | 0.741501 | 2.4:+67276988 | MS.gene004401:CDS |
CCTGAAACAAATGCACAAGG+TGG | 0.756569 | 2.4:-67272994 | None:intergenic |
CATTTGGGGAAGGTATCTCG+CGG | 0.758593 | 2.4:-67277280 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CGTATTTTTTTTTTAAATAA+TGG | - | chr2.4:67274271-67274290 | None:intergenic | 10.0% |
!! | AAAAATAATAATCATATGTC+AGG | - | chr2.4:67276619-67276638 | None:intergenic | 15.0% |
!! | ACATTATAAAAAATAGTGAA+AGG | - | chr2.4:67273043-67273062 | None:intergenic | 15.0% |
!! | ATTAGTAGATAAGTATAAAA+TGG | + | chr2.4:67277707-67277726 | MS.gene004401:intron | 15.0% |
!! | ATTATAAAAAATAGTGAAAG+GGG | - | chr2.4:67273041-67273060 | None:intergenic | 15.0% |
!! | CAATAGTTAGTTATAAAAAT+TGG | - | chr2.4:67276686-67276705 | None:intergenic | 15.0% |
!! | CATTATAAAAAATAGTGAAA+GGG | - | chr2.4:67273042-67273061 | None:intergenic | 15.0% |
!!! | ATTTTTTATAATGTAGTGTT+GGG | + | chr2.4:67273049-67273068 | MS.gene004401:intron | 15.0% |
!!! | TATTATATTTCTATAGTTCA+TGG | + | chr2.4:67273436-67273455 | MS.gene004401:intron | 15.0% |
!!! | TATTTTTTATAATGTAGTGT+TGG | + | chr2.4:67273048-67273067 | MS.gene004401:intron | 15.0% |
!!! | TTCTTGAACTAATTTTTTTT+GGG | + | chr2.4:67273179-67273198 | MS.gene004401:intron | 15.0% |
!!! | TTTAATCAAATTTTGCAATT+GGG | + | chr2.4:67273121-67273140 | MS.gene004401:intron | 15.0% |
!!! | TTTTCTTAATATGTGTAAAA+TGG | - | chr2.4:67277487-67277506 | None:intergenic | 15.0% |
!!! | TTTTTTTCAAATGTGATATA+GGG | + | chr2.4:67278050-67278069 | MS.gene004401:intron | 15.0% |
!!! | TTTTTTTTCAAATGTGATAT+AGG | + | chr2.4:67278049-67278068 | MS.gene004401:intron | 15.0% |
!! | AAAATGACTTTCACATATTT+GGG | - | chr2.4:67275110-67275129 | None:intergenic | 20.0% |
!! | AAATTGGATGAAATAATTAG+TGG | + | chr2.4:67276534-67276553 | MS.gene004401:intron | 20.0% |
!! | ACAAAAACAAACCATTAATT+TGG | - | chr2.4:67273494-67273513 | None:intergenic | 20.0% |
!! | ACCAAAACAAAACAAAAAAA+AGG | - | chr2.4:67275703-67275722 | None:intergenic | 20.0% |
!! | ATTAATGAATAGAAAAGAAG+AGG | - | chr2.4:67274989-67275008 | None:intergenic | 20.0% |
!! | CGATAATGAAAATACATAAA+TGG | - | chr2.4:67277562-67277581 | None:intergenic | 20.0% |
!! | GAACTCTCTAATTAATATTA+TGG | - | chr2.4:67277967-67277986 | None:intergenic | 20.0% |
!! | GATTAAAAAAAGAAAGAGAA+TGG | + | chr2.4:67277510-67277529 | MS.gene004401:intron | 20.0% |
!! | TGTAACTAACTATTGATATA+TGG | + | chr2.4:67276754-67276773 | MS.gene004401:intron | 20.0% |
!! | TTAAATGTAATCATATGTGT+CGG | + | chr2.4:67273710-67273729 | MS.gene004401:intron | 20.0% |
!! | TTAGATATGATATCATAATC+CGG | + | chr2.4:67276238-67276257 | MS.gene004401:intron | 20.0% |
!! | TTTCTCAATTAAGTTTAGAA+GGG | + | chr2.4:67277760-67277779 | MS.gene004401:intron | 20.0% |
!!! | ACAAAGTATTTTTACATCTA+AGG | - | chr2.4:67276797-67276816 | None:intergenic | 20.0% |
!!! | ATCAAACTTCTTATTTTAGA+TGG | + | chr2.4:67274815-67274834 | MS.gene004401:intron | 20.0% |
!!! | ATCTAAAATAAGAAGTTTGA+TGG | - | chr2.4:67274816-67274835 | None:intergenic | 20.0% |
!!! | ATTTTCATTCTTTTGATATG+TGG | + | chr2.4:67273532-67273551 | MS.gene004401:intron | 20.0% |
!!! | CAAAGTATTTTTACATCTAA+GGG | - | chr2.4:67276796-67276815 | None:intergenic | 20.0% |
!!! | GTTCTTGAACTAATTTTTTT+TGG | + | chr2.4:67273178-67273197 | MS.gene004401:intron | 20.0% |
!!! | GTTTAATCAAATTTTGCAAT+TGG | + | chr2.4:67273120-67273139 | MS.gene004401:intron | 20.0% |
!!! | TCCTTTTTTTTGTTTTGTTT+TGG | + | chr2.4:67275699-67275718 | MS.gene004401:intron | 20.0% |
!!! | TTCCTTAATTTTAATCCATA+GGG | - | chr2.4:67277422-67277441 | None:intergenic | 20.0% |
!!! | TTTCCTTAATTTTAATCCAT+AGG | - | chr2.4:67277423-67277442 | None:intergenic | 20.0% |
!!! | TTTTCTCAATTAAGTTTAGA+AGG | + | chr2.4:67277759-67277778 | MS.gene004401:intron | 20.0% |
! | AAAGACTATATCTATGTCAT+GGG | - | chr2.4:67274640-67274659 | None:intergenic | 25.0% |
! | AAAGTAAGATTCACAAAAGT+AGG | - | chr2.4:67276836-67276855 | None:intergenic | 25.0% |
! | AAAGTGAAAAACAATAGGTT+AGG | + | chr2.4:67277589-67277608 | MS.gene004401:intron | 25.0% |
! | AACAAGCAGAATCAAATTAA+AGG | - | chr2.4:67274228-67274247 | None:intergenic | 25.0% |
! | AACAGAGAAATCAAAATGTT+CGG | - | chr2.4:67275018-67275037 | None:intergenic | 25.0% |
! | AACATAAAGAACCACAAATA+AGG | - | chr2.4:67277365-67277384 | None:intergenic | 25.0% |
! | AATGCAAAGTGAAAAACAAT+AGG | + | chr2.4:67277584-67277603 | MS.gene004401:intron | 25.0% |
! | ACAAGCAGAATCAAATTAAA+GGG | - | chr2.4:67274227-67274246 | None:intergenic | 25.0% |
! | ACATAAAGAACCACAAATAA+GGG | - | chr2.4:67277364-67277383 | None:intergenic | 25.0% |
! | ACCTTGAAAGTTTGAAAAAA+TGG | - | chr2.4:67274677-67274696 | None:intergenic | 25.0% |
! | ACGCAAATGAAGTATAAATA+TGG | - | chr2.4:67278379-67278398 | None:intergenic | 25.0% |
! | AGTCAATTCAATGTCTTTAA+TGG | - | chr2.4:67274056-67274075 | None:intergenic | 25.0% |
! | ATAAAGAAACCAACTTACTA+GGG | - | chr2.4:67275813-67275832 | None:intergenic | 25.0% |
! | ATAAGATAATTGCTCTACTA+TGG | - | chr2.4:67274463-67274482 | None:intergenic | 25.0% |
! | ATAAGATGAAGAATACAGAA+TGG | - | chr2.4:67276269-67276288 | None:intergenic | 25.0% |
! | ATAAGCTCATATGACAAAAA+AGG | - | chr2.4:67277894-67277913 | None:intergenic | 25.0% |
! | ATAATTAGTGGCATGATAAT+AGG | + | chr2.4:67276546-67276565 | MS.gene004401:intron | 25.0% |
! | ATAATTTGACAAACTATCTC+AGG | + | chr2.4:67274601-67274620 | MS.gene004401:intron | 25.0% |
! | ATCCTTCATCTATAACTATT+TGG | - | chr2.4:67277099-67277118 | None:intergenic | 25.0% |
! | ATGAAGTATAAATATGGGAA+AGG | - | chr2.4:67278373-67278392 | None:intergenic | 25.0% |
! | ATTAAGCATTTGATTATCAC+AGG | + | chr2.4:67274009-67274028 | MS.gene004401:intron | 25.0% |
! | CAATTCACAATTCAGAAAAT+AGG | + | chr2.4:67275542-67275561 | MS.gene004401:intron | 25.0% |
! | CGCAAATGAAGTATAAATAT+GGG | - | chr2.4:67278378-67278397 | None:intergenic | 25.0% |
! | CTCAAAATAATTCAAGAATC+AGG | - | chr2.4:67275421-67275440 | None:intergenic | 25.0% |
! | GAAAAACTGTTTGAAAACAT+TGG | + | chr2.4:67274546-67274565 | MS.gene004401:intron | 25.0% |
! | GAAAATGACTTTCACATATT+TGG | - | chr2.4:67275111-67275130 | None:intergenic | 25.0% |
! | GAATCTAAGAATTTACATGT+TGG | + | chr2.4:67276929-67276948 | MS.gene004401:CDS | 25.0% |
! | GACTTATTTGTAAAGAAGTA+AGG | + | chr2.4:67276414-67276433 | MS.gene004401:intron | 25.0% |
! | GGAAGAAACATATGTAATAT+TGG | + | chr2.4:67274836-67274855 | MS.gene004401:intron | 25.0% |
! | GTCTTATCATATTAAGTGTT+TGG | + | chr2.4:67275905-67275924 | MS.gene004401:intron | 25.0% |
! | GTTGTGTTGAATTGAAATTA+AGG | - | chr2.4:67272925-67272944 | None:intergenic | 25.0% |
! | TAAAGACTATATCTATGTCA+TGG | - | chr2.4:67274641-67274660 | None:intergenic | 25.0% |
! | TAATTAGTGGCATGATAATA+GGG | + | chr2.4:67276547-67276566 | MS.gene004401:intron | 25.0% |
! | TACACGATAAAATACAATGA+AGG | - | chr2.4:67278332-67278351 | None:intergenic | 25.0% |
! | TACATCTTATTCTTCATTCT+TGG | - | chr2.4:67276172-67276191 | None:intergenic | 25.0% |
! | TAGAACCTTACACTAATATT+GGG | - | chr2.4:67275751-67275770 | None:intergenic | 25.0% |
! | TAGTTCATGAACTAAATTGA+CGG | + | chr2.4:67273389-67273408 | MS.gene004401:intron | 25.0% |
! | TATTAATTAGAGAGTTCGAT+TGG | + | chr2.4:67277970-67277989 | MS.gene004401:intron | 25.0% |
! | TCTGCTATAAACTAGAAAAT+TGG | + | chr2.4:67277926-67277945 | MS.gene004401:intron | 25.0% |
! | TGATATTATGCAACAAACTA+TGG | + | chr2.4:67275186-67275205 | MS.gene004401:intron | 25.0% |
! | TGTATCATTTGATTCACAAT+AGG | + | chr2.4:67275514-67275533 | MS.gene004401:intron | 25.0% |
! | TTAGAACCTTACACTAATAT+TGG | - | chr2.4:67275752-67275771 | None:intergenic | 25.0% |
! | TTTATATTCAAGTCGTGAAT+CGG | - | chr2.4:67275651-67275670 | None:intergenic | 25.0% |
! | TTTGATAAAACAAAATCGCT+TGG | + | chr2.4:67277185-67277204 | MS.gene004401:intron | 25.0% |
!! | ATTAATATTATGGCTCTGTT+TGG | - | chr2.4:67277957-67277976 | None:intergenic | 25.0% |
!! | TACTGAAATCTAAAACAAGA+TGG | - | chr2.4:67278148-67278167 | None:intergenic | 25.0% |
!! | TTCTTTTGGCATTTGATAAA+TGG | + | chr2.4:67275395-67275414 | MS.gene004401:intron | 25.0% |
!! | TTTTGCTTTCAATCTAATTC+AGG | + | chr2.4:67278532-67278551 | MS.gene004401:intron | 25.0% |
!!! | ATTTCTAGACTTCAATTTTG+TGG | - | chr2.4:67278466-67278485 | None:intergenic | 25.0% |
!!! | CTGATTCTTGAATTATTTTG+AGG | + | chr2.4:67275419-67275438 | MS.gene004401:intron | 25.0% |
!!! | GTCATTTGTTTTTTTTCTTC+TGG | + | chr2.4:67274698-67274717 | MS.gene004401:intron | 25.0% |
!!! | TATTGTTTTTCACTTTGCAT+TGG | - | chr2.4:67277585-67277604 | None:intergenic | 25.0% |
!!! | TTGTTTTTCATCTTACTATG+TGG | - | chr2.4:67274177-67274196 | None:intergenic | 25.0% |
AAACTGTACAATGTAACCAA+CGG | + | chr2.4:67278085-67278104 | MS.gene004401:intron | 30.0% | |
AATGAAGCACAGATACTATT+CGG | - | chr2.4:67273781-67273800 | None:intergenic | 30.0% | |
ACACTAATATTGGGAATCAA+AGG | - | chr2.4:67275742-67275761 | None:intergenic | 30.0% | |
ACAGAGAAATCAAAATGTTC+GGG | - | chr2.4:67275017-67275036 | None:intergenic | 30.0% | |
ACTGTGAATACCTAAATGTA+AGG | + | chr2.4:67274569-67274588 | MS.gene004401:intron | 30.0% | |
AGAGAAAACATTGTGATGAT+TGG | - | chr2.4:67272764-67272783 | None:intergenic | 30.0% | |
AGGTGTTCCATATACAATAA+GGG | - | chr2.4:67278623-67278642 | None:intergenic | 30.0% | |
ATCAAATGCCAAAAGAAAAG+TGG | - | chr2.4:67275392-67275411 | None:intergenic | 30.0% | |
ATCAGCTAATATGGAATATC+CGG | - | chr2.4:67276198-67276217 | None:intergenic | 30.0% | |
ATGACATTTGATCTATTTGC+AGG | + | chr2.4:67276865-67276884 | MS.gene004401:intron | 30.0% | |
ATGGAACACCTTATACTAAT+AGG | + | chr2.4:67278632-67278651 | MS.gene004401:CDS | 30.0% | |
ATGTGATATAGGGAGTAATT+TGG | + | chr2.4:67278060-67278079 | MS.gene004401:intron | 30.0% | |
ATTGGTACCCAAAATTAGTT+GGG | - | chr2.4:67273208-67273227 | None:intergenic | 30.0% | |
CAAGCAGAATCAAATTAAAG+GGG | - | chr2.4:67274226-67274245 | None:intergenic | 30.0% | |
CATAAAGAAACCAACTTACT+AGG | - | chr2.4:67275814-67275833 | None:intergenic | 30.0% | |
GAAATAAAGCCTGTTGTTAT+TGG | + | chr2.4:67276905-67276924 | MS.gene004401:CDS | 30.0% | |
GAGTTTATACTTCTATCTGT+AGG | + | chr2.4:67274858-67274877 | MS.gene004401:intron | 30.0% | |
GATGAAAAACAAATCAGAAG+AGG | + | chr2.4:67274185-67274204 | MS.gene004401:intron | 30.0% | |
GTGATTCGTTACAATGAATT+AGG | - | chr2.4:67275317-67275336 | None:intergenic | 30.0% | |
TAGGTTAGAGACCAAATTAA+TGG | + | chr2.4:67273480-67273499 | MS.gene004401:intron | 30.0% | |
TATATTACCTTTCCTTGTGA+AGG | - | chr2.4:67278304-67278323 | None:intergenic | 30.0% | |
TCTTATTCTTCATTCTTGGA+CGG | - | chr2.4:67276168-67276187 | None:intergenic | 30.0% | |
TCTTTAATGGAAACAACAGA+TGG | - | chr2.4:67274043-67274062 | None:intergenic | 30.0% | |
TGAAAGCAAAACATTCTTGA+AGG | - | chr2.4:67278523-67278542 | None:intergenic | 30.0% | |
TGAAGAATAAGATGTAACAC+CGG | + | chr2.4:67276176-67276195 | MS.gene004401:intron | 30.0% | |
TGAATAGAAAAGAAGAGGAT+TGG | - | chr2.4:67274984-67275003 | None:intergenic | 30.0% | |
TGACACTAATATCTAGATAC+TGG | - | chr2.4:67274405-67274424 | None:intergenic | 30.0% | |
TGATTCCCAATATTAGTGTA+AGG | + | chr2.4:67275743-67275762 | MS.gene004401:intron | 30.0% | |
TGCCAAATAGTTATAGATGA+AGG | + | chr2.4:67277094-67277113 | MS.gene004401:intron | 30.0% | |
TTAGATTCACCAATAACAAC+AGG | - | chr2.4:67276917-67276936 | None:intergenic | 30.0% | |
TTATGCGATGTAAATTATGC+AGG | + | chr2.4:67277241-67277260 | MS.gene004401:intron | 30.0% | |
TTCTCCTCGTCATATTAAAA+GGG | - | chr2.4:67276092-67276111 | None:intergenic | 30.0% | |
TTGCTTTCAAGATGTTGTAA+TGG | + | chr2.4:67274494-67274513 | MS.gene004401:intron | 30.0% | |
TTGTAATACATGTTGTCAGT+TGG | - | chr2.4:67276389-67276408 | None:intergenic | 30.0% | |
TTTAGCTACAACATGGTAAT+TGG | - | chr2.4:67274735-67274754 | None:intergenic | 30.0% | |
TTTCAATCTAATTCAGGTAC+CGG | + | chr2.4:67278538-67278557 | MS.gene004401:intron | 30.0% | |
! | AAGGTGTTCCATATACAATA+AGG | - | chr2.4:67278624-67278643 | None:intergenic | 30.0% |
! | AAGTAACACTTTTGATGTTG+GGG | + | chr2.4:67273567-67273586 | MS.gene004401:intron | 30.0% |
! | AAGTTTAAAACCAATGCATG+TGG | + | chr2.4:67273881-67273900 | MS.gene004401:intron | 30.0% |
! | AATACGACGCTTTAGATTAA+AGG | + | chr2.4:67274285-67274304 | MS.gene004401:intron | 30.0% |
! | ACTTCATTAGAAGAGGTTTT+GGG | - | chr2.4:67274085-67274104 | None:intergenic | 30.0% |
! | AGAGTATTCTCATATCCATA+AGG | - | chr2.4:67276980-67276999 | None:intergenic | 30.0% |
! | ATGACAAAAAAGGACTTGTT+TGG | - | chr2.4:67277884-67277903 | None:intergenic | 30.0% |
! | GAAGTAACACTTTTGATGTT+GGG | + | chr2.4:67273566-67273585 | MS.gene004401:intron | 30.0% |
! | GGGTCATGAACTTTAAAAAT+AGG | + | chr2.4:67273141-67273160 | MS.gene004401:intron | 30.0% |
! | TCTAAGACCTCAGATAATTT+AGG | + | chr2.4:67275967-67275986 | MS.gene004401:intron | 30.0% |
! | TGAAGTAACACTTTTGATGT+TGG | + | chr2.4:67273565-67273584 | MS.gene004401:intron | 30.0% |
! | TGCCCTATGGATTAAAATTA+AGG | + | chr2.4:67277417-67277436 | MS.gene004401:intron | 30.0% |
!! | AAGTGTTACTTCAACACATT+TGG | - | chr2.4:67273558-67273577 | None:intergenic | 30.0% |
!! | ATAACCAACCACTTTTCTTT+TGG | + | chr2.4:67275381-67275400 | MS.gene004401:intron | 30.0% |
!! | ATGGTCAACAATTCTGAAAT+TGG | + | chr2.4:67276518-67276537 | MS.gene004401:intron | 30.0% |
!! | CTAGTAAGTTGGTTTCTTTA+TGG | + | chr2.4:67275812-67275831 | MS.gene004401:intron | 30.0% |
!! | GAAAGCGTTGTTAAAATTAG+TGG | + | chr2.4:67277680-67277699 | MS.gene004401:intron | 30.0% |
!! | GACGGATTGAAAATAGTTTA+GGG | + | chr2.4:67273407-67273426 | MS.gene004401:intron | 30.0% |
!! | TGACGGATTGAAAATAGTTT+AGG | + | chr2.4:67273406-67273425 | MS.gene004401:intron | 30.0% |
!! | TTGTTAAGTTGAATCCAACA+TGG | + | chr2.4:67277020-67277039 | MS.gene004401:intron | 30.0% |
!!! | ACAGACAGTTTTTTCTTACT+GGG | - | chr2.4:67275887-67275906 | None:intergenic | 30.0% |
!!! | GCCATTTTTTCAAACTTTCA+AGG | + | chr2.4:67274673-67274692 | MS.gene004401:intron | 30.0% |
AAACCTGAAACAAATGCACA+AGG | - | chr2.4:67273000-67273019 | None:intergenic | 35.0% | |
AAATGCAGGCATTTGCTTTA+TGG | + | chr2.4:67275840-67275859 | MS.gene004401:intron | 35.0% | |
AAGACCTCAGATAATTTAGG+AGG | + | chr2.4:67275970-67275989 | MS.gene004401:intron | 35.0% | |
AAGACTTGAACTGAAGACTA+TGG | - | chr2.4:67272879-67272898 | None:intergenic | 35.0% | |
AATACATGTTGTCAGTTGGA+AGG | - | chr2.4:67276385-67276404 | None:intergenic | 35.0% | |
AATCACCATTTCGTATGTGT+TGG | - | chr2.4:67273971-67273990 | None:intergenic | 35.0% | |
AATGCCAAAAGAAAAGTGGT+TGG | - | chr2.4:67275388-67275407 | None:intergenic | 35.0% | |
AATGTAATCATATGTGTCGG+TGG | + | chr2.4:67273713-67273732 | MS.gene004401:intron | 35.0% | |
ACCATTACTTACAATACTCC+TGG | + | chr2.4:67276310-67276329 | MS.gene004401:intron | 35.0% | |
ACGATTATTGTGGGTCAAAA+GGG | - | chr2.4:67277455-67277474 | None:intergenic | 35.0% | |
ACGTTGTAAACCACTAGTAT+CGG | - | chr2.4:67274765-67274784 | None:intergenic | 35.0% | |
ACTTCTAATTACAGAGTCGA+TGG | - | chr2.4:67278593-67278612 | None:intergenic | 35.0% | |
AGAACAGCTAGATCATATGA+TGG | - | chr2.4:67274946-67274965 | None:intergenic | 35.0% | |
AGATACACGCTAACATCAAT+TGG | - | chr2.4:67275268-67275287 | None:intergenic | 35.0% | |
AGATGAAGGATGAAAATCTG+TGG | + | chr2.4:67277108-67277127 | MS.gene004401:intron | 35.0% | |
AGCAAGTTCACAACATTGAA+AGG | - | chr2.4:67276458-67276477 | None:intergenic | 35.0% | |
AGCATATAGAAGAATCCAAC+AGG | - | chr2.4:67275044-67275063 | None:intergenic | 35.0% | |
AGTCCTATGATCAGAAGTAA+AGG | - | chr2.4:67278179-67278198 | None:intergenic | 35.0% | |
AGTTAGTTAGACAGGTTAGA+AGG | - | chr2.4:67276657-67276676 | None:intergenic | 35.0% | |
AGTTCATGAACTAAACCCTA+GGG | - | chr2.4:67273382-67273401 | None:intergenic | 35.0% | |
ATAGGTCACAACTACAATTG+TGG | - | chr2.4:67273621-67273640 | None:intergenic | 35.0% | |
ATATCCATAAGGATTCCCAA+TGG | - | chr2.4:67276969-67276988 | None:intergenic | 35.0% | |
ATATGATCTAGCTGTTCTGA+AGG | + | chr2.4:67274948-67274967 | MS.gene004401:CDS | 35.0% | |
ATCATATTAAGTGTTTGGCC+AGG | + | chr2.4:67275910-67275929 | MS.gene004401:intron | 35.0% | |
ATCTGCCTTAATACTACACA+AGG | + | chr2.4:67275935-67275954 | MS.gene004401:intron | 35.0% | |
ATGAGAATACTCTCACAACA+GGG | + | chr2.4:67276987-67277006 | MS.gene004401:CDS | 35.0% | |
ATGTTAACAGGAAATTCAGG+CGG | + | chr2.4:67278231-67278250 | MS.gene004401:intron | 35.0% | |
ATTTGGGCATGTTATGGTAA+TGG | - | chr2.4:67275094-67275113 | None:intergenic | 35.0% | |
CAAATTGGAGAGACAATGAT+AGG | + | chr2.4:67273461-67273480 | MS.gene004401:intron | 35.0% | |
CACAGTAAGCATAAATGGAA+GGG | + | chr2.4:67276484-67276503 | MS.gene004401:intron | 35.0% | |
CATCCTTTACTTCTGATCAT+AGG | + | chr2.4:67278173-67278192 | MS.gene004401:intron | 35.0% | |
CCATTTATGCTTACTGTGAA+AGG | - | chr2.4:67276482-67276501 | None:intergenic | 35.0% | |
CCTTTCACAGTAAGCATAAA+TGG | + | chr2.4:67276479-67276498 | MS.gene004401:intron | 35.0% | |
CTATAGTTCATGGACCAAAT+TGG | + | chr2.4:67273446-67273465 | MS.gene004401:intron | 35.0% | |
CTATCATTGTCTCTCCAATT+TGG | - | chr2.4:67273463-67273482 | None:intergenic | 35.0% | |
CTATGATCAGAAGTAAAGGA+TGG | - | chr2.4:67278175-67278194 | None:intergenic | 35.0% | |
CTTCTAATTACAGAGTCGAT+GGG | - | chr2.4:67278592-67278611 | None:intergenic | 35.0% | |
CTTCTCCTCGTCATATTAAA+AGG | - | chr2.4:67276093-67276112 | None:intergenic | 35.0% | |
GATACACGCTAACATCAATT+GGG | - | chr2.4:67275267-67275286 | None:intergenic | 35.0% | |
GATTGGTACCCAAAATTAGT+TGG | - | chr2.4:67273209-67273228 | None:intergenic | 35.0% | |
GATTTCTCTGTTATTCCTGT+TGG | + | chr2.4:67275026-67275045 | MS.gene004401:intron | 35.0% | |
GTAAGATTCACAAAAGTAGG+CGG | - | chr2.4:67276833-67276852 | None:intergenic | 35.0% | |
GTACCATCCCTTATTGTATA+TGG | + | chr2.4:67278613-67278632 | MS.gene004401:CDS | 35.0% | |
GTGCTTTCAATTCAATGAAG+TGG | + | chr2.4:67274516-67274535 | MS.gene004401:intron | 35.0% | |
GTTCCATATACAATAAGGGA+TGG | - | chr2.4:67278619-67278638 | None:intergenic | 35.0% | |
GTTTCCTCCTAAATTATCTG+AGG | - | chr2.4:67275977-67275996 | None:intergenic | 35.0% | |
TAATGAAGTCATGCTAGATG+AGG | + | chr2.4:67274096-67274115 | MS.gene004401:CDS | 35.0% | |
TACAGTTGCATCAGCTAATA+TGG | - | chr2.4:67276207-67276226 | None:intergenic | 35.0% | |
TAGCATGACTTCATTAGAAG+AGG | - | chr2.4:67274092-67274111 | None:intergenic | 35.0% | |
TAGTGGTTTACAACGTTGTA+AGG | + | chr2.4:67274769-67274788 | MS.gene004401:CDS | 35.0% | |
TAGTTCATGAACTAAACCCT+AGG | - | chr2.4:67273383-67273402 | None:intergenic | 35.0% | |
TAGTTGTGACCTATGAAACA+CGG | + | chr2.4:67273627-67273646 | MS.gene004401:intron | 35.0% | |
TATGAGAATACTCTCACAAC+AGG | + | chr2.4:67276986-67277005 | MS.gene004401:CDS | 35.0% | |
TCAAATGCGACGATTATTGT+GGG | - | chr2.4:67277464-67277483 | None:intergenic | 35.0% | |
TCACAGTAAGCATAAATGGA+AGG | + | chr2.4:67276483-67276502 | MS.gene004401:intron | 35.0% | |
TCACATATTTGGGCATGTTA+TGG | - | chr2.4:67275100-67275119 | None:intergenic | 35.0% | |
TCTTTATGGCACAAAAATGC+AGG | + | chr2.4:67275826-67275845 | MS.gene004401:intron | 35.0% | |
TGACCCAATACAAGAATTGT+TGG | + | chr2.4:67273281-67273300 | MS.gene004401:intron | 35.0% | |
TGATGGAATTATCAGCACAA+GGG | - | chr2.4:67274799-67274818 | None:intergenic | 35.0% | |
TGTTTGTTCTCGCTTCAATT+AGG | - | chr2.4:67273249-67273268 | None:intergenic | 35.0% | |
TTAATATGACGAGGAGAAGA+GGG | + | chr2.4:67276094-67276113 | MS.gene004401:intron | 35.0% | |
TTGATGGAATTATCAGCACA+AGG | - | chr2.4:67274800-67274819 | None:intergenic | 35.0% | |
TTGGTCCTTGTGTAGTATTA+AGG | - | chr2.4:67275943-67275962 | None:intergenic | 35.0% | |
TTGTGTAGTATTAAGGCAGA+TGG | - | chr2.4:67275936-67275955 | None:intergenic | 35.0% | |
TTTAATATGACGAGGAGAAG+AGG | + | chr2.4:67276093-67276112 | MS.gene004401:intron | 35.0% | |
! | AGTAACACTTTTGATGTTGG+GGG | + | chr2.4:67273568-67273587 | MS.gene004401:intron | 35.0% |
! | ATCTGAGGTCTTAGAATACT+TGG | - | chr2.4:67275962-67275981 | None:intergenic | 35.0% |
! | CAATGGGAATAACTTTTCCA+GGG | + | chr2.4:67274897-67274916 | MS.gene004401:CDS | 35.0% |
! | CACTTTAAAGGACTTTGCAA+CGG | - | chr2.4:67273814-67273833 | None:intergenic | 35.0% |
! | CTTCATTAGAAGAGGTTTTG+GGG | - | chr2.4:67274084-67274103 | None:intergenic | 35.0% |
! | CTTTAGATTAAAGGTTGGTC+CGG | + | chr2.4:67274294-67274313 | MS.gene004401:intron | 35.0% |
! | CTTTGTTTGGTAAAAGGTAG+CGG | + | chr2.4:67277627-67277646 | MS.gene004401:intron | 35.0% |
! | GACTTCATTAGAAGAGGTTT+TGG | - | chr2.4:67274086-67274105 | None:intergenic | 35.0% |
! | GGAACTAAACATTTGTTGCA+AGG | - | chr2.4:67275682-67275701 | None:intergenic | 35.0% |
! | GGCTTCATTTGGGATAAATT+TGG | + | chr2.4:67274151-67274170 | MS.gene004401:CDS | 35.0% |
! | GGTTAGTTAGTTAGTTAGAC+AGG | - | chr2.4:67276665-67276684 | None:intergenic | 35.0% |
! | GTAAGCTATACCCTTATTTG+TGG | + | chr2.4:67277351-67277370 | MS.gene004401:intron | 35.0% |
! | TAGCTAGTTTAGCTACAACA+TGG | - | chr2.4:67274742-67274761 | None:intergenic | 35.0% |
! | TGGAGAATTCTAAGAAGCAT+TGG | - | chr2.4:67278128-67278147 | None:intergenic | 35.0% |
! | TGGGAAACCCAACTAATTTT+GGG | + | chr2.4:67273198-67273217 | MS.gene004401:intron | 35.0% |
! | TTGGGAAACCCAACTAATTT+TGG | + | chr2.4:67273197-67273216 | MS.gene004401:intron | 35.0% |
! | TTTTCTTACTGGGACAGAAT+AGG | - | chr2.4:67275877-67275896 | None:intergenic | 35.0% |
!! | ACCAGGAGTATTGTAAGTAA+TGG | - | chr2.4:67276314-67276333 | None:intergenic | 35.0% |
!! | AGAATTCTAAGAAGCATTGG+GGG | - | chr2.4:67278125-67278144 | None:intergenic | 35.0% |
!! | GAGAATTCTAAGAAGCATTG+GGG | - | chr2.4:67278126-67278145 | None:intergenic | 35.0% |
!! | GGAGAATTCTAAGAAGCATT+GGG | - | chr2.4:67278127-67278146 | None:intergenic | 35.0% |
!! | GTTTAGAGTTCCTCTTTTCA+AGG | + | chr2.4:67276047-67276066 | MS.gene004401:intron | 35.0% |
!! | TATGGTAATGGATTGGAAAG+TGG | - | chr2.4:67275082-67275101 | None:intergenic | 35.0% |
!! | TATTTGCAGGTTGATGTTGA+TGG | + | chr2.4:67276878-67276897 | MS.gene004401:intron | 35.0% |
!! | TTTTCCTAGTTGATGCCAAT+GGG | + | chr2.4:67274881-67274900 | MS.gene004401:CDS | 35.0% |
!!! | GACAGACAGTTTTTTCTTAC+TGG | - | chr2.4:67275888-67275907 | None:intergenic | 35.0% |
!!! | TTTTTTTTCTTCTGGTGCAC+AGG | + | chr2.4:67274706-67274725 | MS.gene004401:intron | 35.0% |
AAACTAGCTACCGATACTAG+TGG | + | chr2.4:67274752-67274771 | MS.gene004401:CDS | 40.0% | |
ACTGATGCAGCTATTAATGC+AGG | + | chr2.4:67277329-67277348 | MS.gene004401:CDS | 40.0% | |
AGAATACAGAATGGCAGATC+CGG | - | chr2.4:67276260-67276279 | None:intergenic | 40.0% | |
AGAGTTCTTAGCAGATTCAG+AGG | - | chr2.4:67277064-67277083 | None:intergenic | 40.0% | |
AGCTGTTGTGAAAGTGAAAG+TGG | - | chr2.4:67272947-67272966 | None:intergenic | 40.0% | |
ATACAAGAATTGTTGGCGCA+TGG | + | chr2.4:67273288-67273307 | MS.gene004401:intron | 40.0% | |
ATCGAAAGACCCTAGTAAGT+TGG | + | chr2.4:67275801-67275820 | MS.gene004401:intron | 40.0% | |
ATTACCTTTCCTTGTGAAGG+TGG | - | chr2.4:67278301-67278320 | None:intergenic | 40.0% | |
ATTGACACATGTTCGACAGT+GGG | + | chr2.4:67273744-67273763 | MS.gene004401:intron | 40.0% | |
CAACGATATGTTTCGAACAC+CGG | - | chr2.4:67274316-67274335 | None:intergenic | 40.0% | |
CAATTGTGGTCGCACTTTAA+AGG | - | chr2.4:67273826-67273845 | None:intergenic | 40.0% | |
CCAACAAATGCTTGGTATTG+AGG | - | chr2.4:67277392-67277411 | None:intergenic | 40.0% | |
CCAGGGAAGGGAAAATAATT+GGG | + | chr2.4:67274914-67274933 | MS.gene004401:CDS | 40.0% | |
CCTCAATACCAAGCATTTGT+TGG | + | chr2.4:67277389-67277408 | MS.gene004401:intron | 40.0% | |
CCTGGAAAAGTTATTCCCAT+TGG | - | chr2.4:67274899-67274918 | None:intergenic | 40.0% | |
CGGATGTTAACAGGAAATTC+AGG | + | chr2.4:67278228-67278247 | MS.gene004401:intron | 40.0% | |
CTATCTACACTTAGTGTAGC+TGG | + | chr2.4:67275336-67275355 | MS.gene004401:intron | 40.0% | |
CTGTGTTTACTCCAACAACA+TGG | - | chr2.4:67278278-67278297 | None:intergenic | 40.0% | |
GACGATTATTGTGGGTCAAA+AGG | - | chr2.4:67277456-67277475 | None:intergenic | 40.0% | |
GATAATTTAGGAGGAAACCC+TGG | + | chr2.4:67275979-67275998 | MS.gene004401:intron | 40.0% | |
GATGAAGATGCAAAAGTGGA+AGG | + | chr2.4:67274118-67274137 | MS.gene004401:CDS | 40.0% | |
GCACAGATACTATTCGGATT+AGG | - | chr2.4:67273775-67273794 | None:intergenic | 40.0% | |
GCGCCAACAATTCTTGTATT+GGG | - | chr2.4:67273287-67273306 | None:intergenic | 40.0% | |
GTCAAATGCGACGATTATTG+TGG | - | chr2.4:67277465-67277484 | None:intergenic | 40.0% | |
GTTCTCCAACACATACGAAA+TGG | + | chr2.4:67273963-67273982 | MS.gene004401:intron | 40.0% | |
TAAATTATGCAGGTGGTCAG+TGG | + | chr2.4:67277251-67277270 | MS.gene004401:intron | 40.0% | |
TAATATGACGAGGAGAAGAG+GGG | + | chr2.4:67276095-67276114 | MS.gene004401:intron | 40.0% | |
TACAAGAATTGTTGGCGCAT+GGG | + | chr2.4:67273289-67273308 | MS.gene004401:intron | 40.0% | |
TAGCTGATGCAACTGTACTA+TGG | + | chr2.4:67276210-67276229 | MS.gene004401:intron | 40.0% | |
TATTCCCATTGGCATCAACT+AGG | - | chr2.4:67274888-67274907 | None:intergenic | 40.0% | |
TCAATTAGGCCTCTAGTTGA+TGG | - | chr2.4:67273235-67273254 | None:intergenic | 40.0% | |
TCCAGGGAAGGGAAAATAAT+TGG | + | chr2.4:67274913-67274932 | MS.gene004401:CDS | 40.0% | |
TGAACTAAACCCTAGGGATT+TGG | - | chr2.4:67273376-67273395 | None:intergenic | 40.0% | |
TGAGAATACTCTCACAACAG+GGG | + | chr2.4:67276988-67277007 | MS.gene004401:CDS | 40.0% | |
TGAGGATGAAGATGCAAAAG+TGG | + | chr2.4:67274114-67274133 | MS.gene004401:CDS | 40.0% | |
TGCATACGTGCCTTACATTT+AGG | - | chr2.4:67274582-67274601 | None:intergenic | 40.0% | |
TGCGATGTAAATTATGCAGG+TGG | + | chr2.4:67277244-67277263 | MS.gene004401:intron | 40.0% | |
TGCGCCAACAATTCTTGTAT+TGG | - | chr2.4:67273288-67273307 | None:intergenic | 40.0% | |
TGTCGAACATGTGTCAATGT+CGG | - | chr2.4:67273742-67273761 | None:intergenic | 40.0% | |
TTAGACAGGTTAGAAGGACA+GGG | - | chr2.4:67276651-67276670 | None:intergenic | 40.0% | |
TTGAGTGTAACCACATGTGT+CGG | - | chr2.4:67274357-67274376 | None:intergenic | 40.0% | |
TTGTCAATCTCCACATGCAT+TGG | - | chr2.4:67273894-67273913 | None:intergenic | 40.0% | |
TTTGCCATTGGGAATCCTTA+TGG | + | chr2.4:67276962-67276981 | MS.gene004401:CDS | 40.0% | |
! | CAAGTCTTGTAGTTGCTTCT+TGG | + | chr2.4:67272891-67272910 | MS.gene004401:CDS | 40.0% |
! | CCAATGGGAATAACTTTTCC+AGG | + | chr2.4:67274896-67274915 | MS.gene004401:CDS | 40.0% |
! | CGACGCTTTAGATTAAAGGT+TGG | + | chr2.4:67274289-67274308 | MS.gene004401:intron | 40.0% |
! | GGAATAACTTTTCCAGGGAA+GGG | + | chr2.4:67274902-67274921 | MS.gene004401:CDS | 40.0% |
! | TGGAAGGGAACACATTTTCA+TGG | + | chr2.4:67276499-67276518 | MS.gene004401:intron | 40.0% |
!! | AAGGTAGCGGATAGTTAACA+AGG | + | chr2.4:67277640-67277659 | MS.gene004401:intron | 40.0% |
!! | CGCAAGCTTTGTTTGGTAAA+AGG | + | chr2.4:67277621-67277640 | MS.gene004401:intron | 40.0% |
!! | GGCATGTTATGGTAATGGAT+TGG | - | chr2.4:67275089-67275108 | None:intergenic | 40.0% |
!! | GTTTTCCTAGTTGATGCCAA+TGG | + | chr2.4:67274880-67274899 | MS.gene004401:CDS | 40.0% |
ACACGACCAAATGAGCTAAC+GGG | + | chr2.4:67276022-67276041 | MS.gene004401:intron | 45.0% | |
AGATACCTTCCCCAAATGGA+GGG | + | chr2.4:67277285-67277304 | MS.gene004401:CDS | 45.0% | |
AGGTGTAGTGTCAAGTGACA+TGG | - | chr2.4:67276137-67276156 | None:intergenic | 45.0% | |
ATATTAAAAGGGCCCAGGTG+TGG | - | chr2.4:67276081-67276100 | None:intergenic | 45.0% | |
ATGAAACACGGTCACAGACA+TGG | + | chr2.4:67273639-67273658 | MS.gene004401:intron | 45.0% | |
ATTCTTGGACGGAGCAAATG+AGG | - | chr2.4:67276157-67276176 | None:intergenic | 45.0% | |
CATTGACACATGTTCGACAG+TGG | + | chr2.4:67273743-67273762 | MS.gene004401:intron | 45.0% | |
CCAATCTCACCATCAACTAG+AGG | + | chr2.4:67273223-67273242 | MS.gene004401:intron | 45.0% | |
CCACCTTGTGCATTTGTTTC+AGG | + | chr2.4:67272994-67273013 | MS.gene004401:CDS | 45.0% | |
CCTGAAACAAATGCACAAGG+TGG | - | chr2.4:67272997-67273016 | None:intergenic | 45.0% | |
CTGATGCAACTGTACTATGG+TGG | + | chr2.4:67276213-67276232 | MS.gene004401:intron | 45.0% | |
CTTACTGGGACAGAATAGGA+GGG | - | chr2.4:67275873-67275892 | None:intergenic | 45.0% | |
CTTAGTAGCTGTAACAGTGG+TGG | - | chr2.4:67272849-67272868 | None:intergenic | 45.0% | |
GACACGACCAAATGAGCTAA+CGG | + | chr2.4:67276021-67276040 | MS.gene004401:intron | 45.0% | |
GAGAGGGAAAGAGGTTCATT+TGG | - | chr2.4:67272787-67272806 | None:intergenic | 45.0% | |
GAGGAATGAGTAGTTAGCGT+TGG | - | chr2.4:67272809-67272828 | None:intergenic | 45.0% | |
GCAACAAGCCAACAAATGCT+TGG | - | chr2.4:67277400-67277419 | None:intergenic | 45.0% | |
GGCAAAAGTAAAGTGACCGT+TGG | - | chr2.4:67278104-67278123 | None:intergenic | 45.0% | |
GTCACAGACATGGAAAGACA+CGG | + | chr2.4:67273649-67273668 | MS.gene004401:intron | 45.0% | |
GTTAACTCCTGATGAAGCTC+CGG | - | chr2.4:67278560-67278579 | None:intergenic | 45.0% | |
GTTAGACAGGTTAGAAGGAC+AGG | - | chr2.4:67276652-67276671 | None:intergenic | 45.0% | |
TAAACACAGCCACCTTCACA+AGG | + | chr2.4:67278289-67278308 | MS.gene004401:CDS | 45.0% | |
TAACACAACACCGACACATG+TGG | + | chr2.4:67274344-67274363 | MS.gene004401:intron | 45.0% | |
TAGTATTAAGGCAGATGGCC+TGG | - | chr2.4:67275931-67275950 | None:intergenic | 45.0% | |
TATGATCTTGTGTTCGCGCA+CGG | + | chr2.4:67278208-67278227 | MS.gene004401:intron | 45.0% | |
TCGCTTAGTAGCTGTAACAG+TGG | - | chr2.4:67272852-67272871 | None:intergenic | 45.0% | |
TCGTCATATTAAAAGGGCCC+AGG | - | chr2.4:67276086-67276105 | None:intergenic | 45.0% | |
TCTTACTGGGACAGAATAGG+AGG | - | chr2.4:67275874-67275893 | None:intergenic | 45.0% | |
TGGCCATGAGAGTCAATCAA+TGG | - | chr2.4:67278258-67278277 | None:intergenic | 45.0% | |
TGTCTGTGACCGTGTTTCAT+AGG | - | chr2.4:67273639-67273658 | None:intergenic | 45.0% | |
! | AGCTTCTAGAAGAGTAGACC+AGG | - | chr2.4:67276331-67276350 | None:intergenic | 45.0% |
! | ATGAGTAGTTAGCGTTGGAG+AGG | - | chr2.4:67272804-67272823 | None:intergenic | 45.0% |
! | CCCAATTATTTTCCCTTCCC+TGG | - | chr2.4:67274917-67274936 | None:intergenic | 45.0% |
! | CTTTGATAGCCCCTCCATTT+GGG | - | chr2.4:67277298-67277317 | None:intergenic | 45.0% |
! | GACAGAGTTGCTTTGCCATT+GGG | + | chr2.4:67276951-67276970 | MS.gene004401:CDS | 45.0% |
! | GGACCATTGATTGACTCTCA+TGG | + | chr2.4:67278252-67278271 | MS.gene004401:CDS | 45.0% |
! | GGGAATAACTTTTCCAGGGA+AGG | + | chr2.4:67274901-67274920 | MS.gene004401:CDS | 45.0% |
! | TGAGTAGTTAGCGTTGGAGA+GGG | - | chr2.4:67272803-67272822 | None:intergenic | 45.0% |
! | TGGGCCCTTTTAATATGACG+AGG | + | chr2.4:67276085-67276104 | MS.gene004401:intron | 45.0% |
! | TGGTCTACTCTTCTAGAAGC+TGG | + | chr2.4:67276330-67276349 | MS.gene004401:intron | 45.0% |
! | TTTGATAGCCCCTCCATTTG+GGG | - | chr2.4:67277297-67277316 | None:intergenic | 45.0% |
!! | CACTGGTTCAGGCTTCATTT+GGG | + | chr2.4:67274141-67274160 | MS.gene004401:CDS | 45.0% |
!! | CCTCTAGTTGATGGTGAGAT+TGG | - | chr2.4:67273226-67273245 | None:intergenic | 45.0% |
!! | GTCGGTGTTGTGTTAATGTC+TGG | - | chr2.4:67274339-67274358 | None:intergenic | 45.0% |
!! | TTTGTTGGCTTGTTGCCCTA+TGG | + | chr2.4:67277404-67277423 | MS.gene004401:intron | 45.0% |
AAACCCCCCGTTAGCTCATT+TGG | - | chr2.4:67276031-67276050 | None:intergenic | 50.0% | |
ACAGCCACCTTCACAAGGAA+AGG | + | chr2.4:67278294-67278313 | MS.gene004401:CDS | 50.0% | |
ACAGGTTAGAAGGACAGGGA+TGG | - | chr2.4:67276647-67276666 | None:intergenic | 50.0% | |
ACGACCAAATGAGCTAACGG+GGG | + | chr2.4:67276024-67276043 | MS.gene004401:intron | 50.0% | |
AGTAGCTGTAACAGTGGTGG+TGG | - | chr2.4:67272846-67272865 | None:intergenic | 50.0% | |
AGTGACATGGAAGCCACATG+TGG | - | chr2.4:67276124-67276143 | None:intergenic | 50.0% | |
ATGCAGGTGGTCAGTGGTTT+AGG | + | chr2.4:67277257-67277276 | MS.gene004401:intron | 50.0% | |
CAACTACAATTGTGGCCGAC+TGG | - | chr2.4:67273613-67273632 | None:intergenic | 50.0% | |
CACGACCAAATGAGCTAACG+GGG | + | chr2.4:67276023-67276042 | MS.gene004401:intron | 50.0% | |
CCAAATGGAGGGGCTATCAA+AGG | + | chr2.4:67277296-67277315 | MS.gene004401:CDS | 50.0% | |
GACTCTCATGGCCATGTTGT+TGG | + | chr2.4:67278264-67278283 | MS.gene004401:CDS | 50.0% | |
GAGATACCTTCCCCAAATGG+AGG | + | chr2.4:67277284-67277303 | MS.gene004401:CDS | 50.0% | |
GATACCTTCCCCAAATGGAG+GGG | + | chr2.4:67277286-67277305 | MS.gene004401:CDS | 50.0% | |
GCTCATTTGGTCGTGTCATG+TGG | - | chr2.4:67276018-67276037 | None:intergenic | 50.0% | |
GGACGAGTCTCCTTGAAAAG+AGG | - | chr2.4:67276060-67276079 | None:intergenic | 50.0% | |
GGGGCAAATGCAAGCAAATG+CGG | + | chr2.4:67273587-67273606 | MS.gene004401:intron | 50.0% | |
GTAGCTGTAACAGTGGTGGT+GGG | - | chr2.4:67272845-67272864 | None:intergenic | 50.0% | |
GTCGCTTGCAACTGCAATTG+TGG | - | chr2.4:67273840-67273859 | None:intergenic | 50.0% | |
TAAACCCTAGGGATTTGGCC+TGG | - | chr2.4:67273371-67273390 | None:intergenic | 50.0% | |
! | CCTTTGATAGCCCCTCCATT+TGG | - | chr2.4:67277299-67277318 | None:intergenic | 50.0% |
! | CTAGAAAAGAGCGCACTCCT+TGG | + | chr2.4:67273329-67273348 | MS.gene004401:intron | 50.0% |
! | GATGCAAAAGTGGAAGGCAC+TGG | + | chr2.4:67274124-67274143 | MS.gene004401:CDS | 50.0% |
! | GGACAGAGTTGCTTTGCCAT+TGG | + | chr2.4:67276950-67276969 | MS.gene004401:CDS | 50.0% |
! | TGCGCTCTTTTCTAGGTCTC+AGG | - | chr2.4:67273324-67273343 | None:intergenic | 50.0% |
! | TTAGCGTTGGAGAGGGAAAG+AGG | - | chr2.4:67272796-67272815 | None:intergenic | 50.0% |
!! | AAAGTGGAAGGCACTGGTTC+AGG | + | chr2.4:67274130-67274149 | MS.gene004401:CDS | 50.0% |
!! | CAAGGAGTGCGCTCTTTTCT+AGG | - | chr2.4:67273331-67273350 | None:intergenic | 50.0% |
!! | CATTTGGGGAAGGTATCTCG+CGG | - | chr2.4:67277283-67277302 | None:intergenic | 50.0% |
!! | CGATGCACGCAAGCTTTGTT+TGG | + | chr2.4:67277614-67277633 | MS.gene004401:intron | 50.0% |
!! | GCACTGGTTCAGGCTTCATT+TGG | + | chr2.4:67274140-67274159 | MS.gene004401:CDS | 50.0% |
!! | TGGAGCACTGACACGTATAC+AGG | - | chr2.4:67274443-67274462 | None:intergenic | 50.0% |
!! | TGTAACAGTGGTGGTGGGAA+GGG | - | chr2.4:67272840-67272859 | None:intergenic | 50.0% |
AAGGAGACTCGTCCACACCT+GGG | + | chr2.4:67276066-67276085 | MS.gene004401:intron | 55.0% | |
ACCACCAGGCCAAATCCCTA+GGG | + | chr2.4:67273364-67273383 | MS.gene004401:intron | 55.0% | |
ATAGCCCCTCCATTTGGGGA+AGG | - | chr2.4:67277293-67277312 | None:intergenic | 55.0% | |
CGACCAAATGAGCTAACGGG+GGG | + | chr2.4:67276025-67276044 | MS.gene004401:intron | 55.0% | |
CGCGAGATACCTTCCCCAAA+TGG | + | chr2.4:67277281-67277300 | MS.gene004401:CDS | 55.0% | |
GACATGGAAGCCACATGTGG+CGG | - | chr2.4:67276121-67276140 | None:intergenic | 55.0% | |
GGTGGGAAGGGTCTTTGTTG+AGG | - | chr2.4:67272828-67272847 | None:intergenic | 55.0% | |
GTGGTGACAGCTCACAACCA+GGG | - | chr2.4:67275999-67276018 | None:intergenic | 55.0% | |
GTTCGCGCACGGATGTTAAC+AGG | + | chr2.4:67278219-67278238 | MS.gene004401:intron | 55.0% | |
TGCAAGCAAATGCGGCCAGT+CGG | + | chr2.4:67273595-67273614 | MS.gene004401:intron | 55.0% | |
TGTGGTGACAGCTCACAACC+AGG | - | chr2.4:67276000-67276019 | None:intergenic | 55.0% | |
!! | CTGTAACAGTGGTGGTGGGA+AGG | - | chr2.4:67272841-67272860 | None:intergenic | 55.0% |
!! | TCAGGTACCGGAGCTTCATC+AGG | + | chr2.4:67278550-67278569 | MS.gene004401:intron | 55.0% |
ACCCTAGGGATTTGGCCTGG+TGG | - | chr2.4:67273368-67273387 | None:intergenic | 60.0% | |
CAAGGAGACTCGTCCACACC+TGG | + | chr2.4:67276065-67276084 | MS.gene004401:intron | 60.0% | |
CACCACCAGGCCAAATCCCT+AGG | + | chr2.4:67273363-67273382 | MS.gene004401:intron | 60.0% | |
GTGGTGAAGGCTTGGGACCA+AGG | - | chr2.4:67273349-67273368 | None:intergenic | 60.0% | |
! | GGGATTTGGCCTGGTGGTGA+AGG | - | chr2.4:67273362-67273381 | None:intergenic | 60.0% |
! | TGGCCTGGTGGTGAAGGCTT+GGG | - | chr2.4:67273356-67273375 | None:intergenic | 60.0% |
! | TTGGCCTGGTGGTGAAGGCT+TGG | - | chr2.4:67273357-67273376 | None:intergenic | 60.0% |
AGAAGAGGGGCCGCCACATG+TGG | + | chr2.4:67276108-67276127 | MS.gene004401:intron | 65.0% | |
GGTCCCAAGCCTTCACCACC+AGG | + | chr2.4:67273350-67273369 | MS.gene004401:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 67272746 | 67278660 | 67272746 | ID=MS.gene004401 |
chr2.4 | mRNA | 67272746 | 67278660 | 67272746 | ID=MS.gene004401.t1;Parent=MS.gene004401 |
chr2.4 | exon | 67272746 | 67273015 | 67272746 | ID=MS.gene004401.t1.exon1;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67272746 | 67273015 | 67272746 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
chr2.4 | exon | 67274031 | 67274180 | 67274031 | ID=MS.gene004401.t1.exon2;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67274031 | 67274180 | 67274031 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
chr2.4 | exon | 67274728 | 67274790 | 67274728 | ID=MS.gene004401.t1.exon3;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67274728 | 67274790 | 67274728 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
chr2.4 | exon | 67274880 | 67274969 | 67274880 | ID=MS.gene004401.t1.exon4;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67274880 | 67274969 | 67274880 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
chr2.4 | exon | 67276887 | 67277009 | 67276887 | ID=MS.gene004401.t1.exon5;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67276887 | 67277009 | 67276887 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
chr2.4 | exon | 67277263 | 67277350 | 67277263 | ID=MS.gene004401.t1.exon6;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67277263 | 67277350 | 67277263 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
chr2.4 | exon | 67278241 | 67278315 | 67278241 | ID=MS.gene004401.t1.exon7;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67278241 | 67278315 | 67278241 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
chr2.4 | exon | 67278554 | 67278660 | 67278554 | ID=MS.gene004401.t1.exon8;Parent=MS.gene004401.t1 |
chr2.4 | CDS | 67278554 | 67278660 | 67278554 | ID=cds.MS.gene004401.t1;Parent=MS.gene004401.t1 |
Gene Sequence |
Protein sequence |