AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00494

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00494.t1 MTR_1g018200 97.911 718 15 0 1 718 13 730 0.0 1469
MS.gene00494.t1 MTR_2g039120 80.532 714 138 1 5 718 14 726 0.0 1229
MS.gene00494.t1 MTR_2g039120 79.706 680 137 1 5 684 14 692 0.0 1160
MS.gene00494.t1 MTR_8g016230 68.985 719 219 3 1 717 7 723 0.0 1077
MS.gene00494.t1 MTR_2g100110 70.904 708 202 3 12 717 21 726 0.0 1060
MS.gene00494.t1 MTR_2g039120 79.248 612 126 1 5 616 14 624 0.0 1033
MS.gene00494.t1 MTR_2g039120 79.478 575 117 1 5 579 14 587 0.0 973
MS.gene00494.t1 MTR_3g112370 63.056 720 261 4 2 718 9 726 0.0 961
MS.gene00494.t1 MTR_1g023120 63.262 705 254 5 15 717 25 726 0.0 957
MS.gene00494.t1 MTR_5g021190 62.500 720 264 6 1 718 9 724 0.0 951
MS.gene00494.t1 MTR_1g023120 62.742 671 245 5 49 717 1 668 0.0 900
MS.gene00494.t1 MTR_2g094020 59.478 728 270 9 5 717 6 723 0.0 878
MS.gene00494.t1 MTR_2g100110 72.281 570 154 3 12 579 21 588 0.0 877
MS.gene00494.t1 MTR_2g094060 59.254 724 274 8 5 717 6 719 0.0 866
MS.gene00494.t1 MTR_2g094060 59.254 724 274 8 5 717 6 719 0.0 866
MS.gene00494.t1 MTR_4g059680 56.868 728 285 9 5 714 6 722 0.0 826
MS.gene00494.t1 MTR_2g094060 59.361 689 259 8 5 682 6 684 0.0 823
MS.gene00494.t1 MTR_3g096900 54.772 723 313 6 6 717 14 733 0.0 783
MS.gene00494.t1 MTR_8g085210 50.931 752 320 10 5 714 30 774 0.0 757
MS.gene00494.t1 MTR_3g096900 54.203 690 302 6 6 684 14 700 0.0 734
MS.gene00494.t1 MTR_3g088520 50.628 717 305 16 6 714 12 687 0.0 679
MS.gene00494.t1 MTR_3g096910 50.622 723 314 13 1 714 10 698 0.0 676
MS.gene00494.t1 MTR_5g024080 48.324 716 352 11 10 714 2 710 0.0 674
MS.gene00494.t1 MTR_5g025830 49.083 709 345 10 19 718 28 729 0.0 674
MS.gene00494.t1 MTR_2g042610 49.371 715 339 13 16 714 24 731 0.0 662
MS.gene00494.t1 MTR_3g096900 54.383 616 270 4 6 613 14 626 0.0 655
MS.gene00494.t1 MTR_4g073290 46.695 711 346 11 12 715 19 703 0.0 650
MS.gene00494.t1 MTR_3g005570 46.403 709 354 12 1 692 5 704 0.0 639
MS.gene00494.t1 MTR_3g117840 45.851 711 346 14 12 715 29 707 0.0 631
MS.gene00494.t1 MTR_3g088520 50.223 673 287 15 49 714 1 632 0.0 630
MS.gene00494.t1 MTR_3g096910 47.251 582 263 13 143 714 1 548 2.10e-166 491
MS.gene00494.t1 MTR_4g126330 47.932 411 117 4 274 684 131 444 1.85e-117 360
MS.gene00494.t1 MTR_4g126330 85.870 92 13 0 74 165 25 116 4.20e-49 179
MS.gene00494.t1 MTR_5g022590 42.154 325 138 9 38 355 11 292 6.74e-75 248
MS.gene00494.t1 MTR_3g005610 31.944 288 158 8 425 706 25 280 7.27e-34 132
MS.gene00494.t1 MTR_2g100000 32.622 328 184 9 29 327 64 383 6.27e-33 135
MS.gene00494.t1 MTR_2g059440 30.970 268 149 7 443 706 44 279 1.12e-28 117
MS.gene00494.t1 MTR_2g059430 27.547 265 128 5 443 706 10 211 1.40e-21 94.7
MS.gene00494.t1 MTR_6g007470 37.671 146 42 3 140 285 2 98 4.90e-19 87.0
MS.gene00494.t1 MTR_8g076800 68.627 51 16 0 140 190 9 59 9.84e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00494.t1 AT4G26140 70.417 720 206 6 1 718 12 726 0.0 1095
MS.gene00494.t1 AT4G26140 68.188 745 205 7 1 718 12 751 0.0 1082
MS.gene00494.t1 AT5G56870 71.309 718 201 5 1 718 12 724 0.0 1066
MS.gene00494.t1 AT3G52840 68.627 714 221 3 5 718 69 779 0.0 1065
MS.gene00494.t1 AT3G13750 69.091 715 217 3 5 717 20 732 0.0 1064
MS.gene00494.t1 AT3G52840 68.627 714 221 3 5 718 15 725 0.0 1061
MS.gene00494.t1 AT4G26140 67.932 711 196 7 1 684 12 717 0.0 1024
MS.gene00494.t1 AT4G36360 62.901 717 258 5 4 718 22 732 0.0 967
MS.gene00494.t1 AT4G36360 62.901 717 258 5 4 718 22 732 0.0 967
MS.gene00494.t1 AT1G45130 62.691 721 261 5 4 718 12 730 0.0 959
MS.gene00494.t1 AT4G26140 71.220 615 172 5 1 615 12 621 0.0 934
MS.gene00494.t1 AT4G26140 71.220 615 172 5 1 615 12 621 0.0 934
MS.gene00494.t1 AT4G26140 70.989 617 172 6 1 615 12 623 0.0 929
MS.gene00494.t1 AT2G28470 60.028 713 266 8 17 717 24 729 0.0 880
MS.gene00494.t1 AT2G28470 60.028 713 266 8 17 717 24 729 0.0 880
MS.gene00494.t1 AT2G28470 59.777 716 269 8 14 717 27 735 0.0 880
MS.gene00494.t1 AT2G28470 59.777 716 269 8 14 717 27 735 0.0 880
MS.gene00494.t1 AT1G45130 61.778 641 241 4 80 718 13 651 0.0 847
MS.gene00494.t1 AT2G28470 59.531 682 257 8 13 682 26 700 0.0 830
MS.gene00494.t1 AT4G26140 71.823 543 146 6 1 541 12 549 0.0 825
MS.gene00494.t1 AT4G26140 68.838 568 145 7 1 541 12 574 0.0 813
MS.gene00494.t1 AT4G26140 68.838 568 145 7 1 541 12 574 0.0 813
MS.gene00494.t1 AT5G63810 54.608 727 316 6 1 717 14 736 0.0 795
MS.gene00494.t1 AT2G32810 52.477 747 317 10 1 714 14 755 0.0 771
MS.gene00494.t1 AT2G32810 52.209 747 319 9 1 714 14 755 0.0 770
MS.gene00494.t1 AT5G20710 48.686 723 355 10 2 714 12 728 0.0 684
MS.gene00494.t1 AT5G63800 49.449 726 321 15 2 714 10 702 0.0 665
MS.gene00494.t1 AT1G77410 48.061 722 329 15 2 714 8 692 0.0 654
MS.gene00494.t1 AT1G77410 47.730 727 329 16 2 714 8 697 0.0 648
MS.gene00494.t1 AT1G31740 45.753 730 332 13 1 714 1 682 0.0 634
MS.gene00494.t1 AT2G16730 45.022 693 348 9 18 704 43 708 0.0 616
MS.gene00494.t1 AT4G35010 44.380 694 351 12 18 704 40 705 0.0 596
MS.gene00494.t1 AT4G38590 44.078 667 337 11 49 707 1 639 0.0 560
MS.gene00494.t1 AT4G38590 41.370 730 371 14 1 707 8 703 0.0 552
MS.gene00494.t1 AT1G77410 46.777 605 276 15 119 714 19 586 1.10e-173 514
MS.gene00494.t1 AT1G77410 46.777 605 276 15 119 714 19 586 1.10e-173 514
MS.gene00494.t1 AT5G20710 43.371 528 284 9 197 714 1 523 1.51e-143 434
MS.gene00494.t1 AT2G04060 34.865 370 163 10 284 651 23 316 1.25e-50 184
MS.gene00494.t1 AT1G72990 36.061 330 174 9 29 329 18 339 1.08e-44 170
MS.gene00494.t1 AT1G72990 36.061 330 174 9 29 329 73 394 2.70e-44 170
MS.gene00494.t1 AT1G72990 36.061 330 174 9 29 329 73 394 2.70e-44 170
MS.gene00494.t1 AT1G72990 34.483 319 172 9 40 329 22 332 1.45e-38 152
MS.gene00494.t1 AT2G04062 39.888 178 86 2 13 190 1 157 1.51e-33 126

Find 182 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTCAAACCTATGTATTT+TGG 0.134516 1.2:-4970843 MS.gene00494:CDS
CCACAATTTGTCCTGCATTT+TGG 0.151033 1.2:+4967316 None:intergenic
TTTGTTAATGGTCAACTTTC+AGG 0.158124 1.2:-4968243 MS.gene00494:intron
CCAATTCTCAGTCCACATTT+TGG 0.160554 1.2:+4969631 None:intergenic
AACATGACCTGCTGAATTTA+TGG 0.167665 1.2:+4968275 None:intergenic
AACAGACAATGAGCCATTTA+AGG 0.176309 1.2:-4970453 MS.gene00494:intron
TTTACCTGAGACATAATTAT+TGG 0.179827 1.2:+4970238 None:intergenic
ACTAATTTCATGCAGGTTAA+TGG 0.191236 1.2:-4968624 MS.gene00494:intron
CTTTCACTAAATGTTAATTT+AGG 0.219363 1.2:+4968106 None:intergenic
TTTCATCATGTTCACAATTT+TGG 0.227558 1.2:+4970291 None:intergenic
CTGGAAAGGCTTACACAAAA+TGG 0.230100 1.2:-4970019 MS.gene00494:CDS
GTTTGTGCTGAATGGAATTA+TGG 0.235478 1.2:-4970615 MS.gene00494:CDS
ATTGAAACTCCAACCTTAAA+TGG 0.236195 1.2:+4970440 None:intergenic
TATCATGGAGGAACTAATTT+TGG 0.268539 1.2:-4969260 MS.gene00494:CDS
AATATCTTCGTTACATTTCC+AGG 0.270788 1.2:+4970802 None:intergenic
TTGAGCCTTCATACCATAAC+TGG 0.288620 1.2:-4967665 MS.gene00494:CDS
TCTTGTTATTGCCGACCTTT+AGG 0.289024 1.2:+4968077 None:intergenic
TCTAGACCCTTCAATGTTAC+TGG 0.308225 1.2:+4967854 None:intergenic
CATAGCTTGTGGCAATAAAA+AGG 0.308874 1.2:+4969222 None:intergenic
TTCTATAGGTACACTGATTT+CGG 0.310712 1.2:-4969506 MS.gene00494:intron
CTCCTTTGTTAACTACTATA+TGG 0.312217 1.2:-4969414 MS.gene00494:intron
CACAAAATGGGCTGCTCAAA+TGG 0.319547 1.2:-4970006 MS.gene00494:CDS
ATGGACATAGCTTCCATAAA+AGG 0.323182 1.2:-4968605 MS.gene00494:CDS
GTTTGGCTCAAGTATGTTCC+AGG 0.324279 1.2:-4970488 MS.gene00494:CDS
TGTACCTCGGGTGTGCTTCT+TGG 0.329719 1.2:+4972253 None:intergenic
TGTGCAGAGGATTTCCTGTT+TGG 0.333950 1.2:-4970505 MS.gene00494:intron
GCATGGGAAAGGGTGAAATA+TGG 0.334337 1.2:-4967429 MS.gene00494:CDS
CTTTATGTTCACTTGCGTAT+TGG 0.343254 1.2:-4970645 MS.gene00494:CDS
TAGTGTTGCTGTGGGTCTTC+CGG 0.356885 1.2:-4968044 MS.gene00494:intron
GACTTCCAAATGAACCAAAA+TGG 0.361446 1.2:-4969091 MS.gene00494:CDS
CATCATAGCAAATGCACTTT+GGG 0.376087 1.2:-4968508 MS.gene00494:CDS
TGCATACCATATTCATCAAT+AGG 0.379546 1.2:+4969188 None:intergenic
CACAAAGCCCTTGTGATTGA+TGG 0.381962 1.2:-4972313 MS.gene00494:CDS
CTGGAAGTTCCTCCATTGAT+TGG 0.382186 1.2:-4967646 MS.gene00494:CDS
TTCTTTACAAAACTTTCATT+AGG 0.386816 1.2:+4968318 None:intergenic
TGATAGATCGAGAATGAGTA+TGG 0.388987 1.2:-4970068 MS.gene00494:intron
GGACCTGTGGAATGGGAAAT+TGG 0.390507 1.2:-4970047 MS.gene00494:CDS
GATGCTCCTATTGATGAATA+TGG 0.390606 1.2:-4969194 MS.gene00494:intron
CCAAAGTGCATTTGCTATGA+TGG 0.390990 1.2:+4968509 None:intergenic
ACATGGAATGTTGGGGTGTT+AGG 0.391351 1.2:-4967878 MS.gene00494:CDS
TCTGCGGCAACGGTTACATT+TGG 0.396362 1.2:-4968812 MS.gene00494:CDS
CCAAAATGTGGACTGAGAAT+TGG 0.399232 1.2:-4969631 MS.gene00494:CDS
TATATTTGATTGTAGTATCA+TGG 0.404132 1.2:-4969275 MS.gene00494:intron
AATGGACATGAGCCTTCTCC+TGG 0.408664 1.2:-4970820 MS.gene00494:CDS
GAGACTTGTCTTGGCAGAAA+TGG 0.417613 1.2:-4967820 MS.gene00494:CDS
CCATCATAGCAAATGCACTT+TGG 0.421070 1.2:-4968509 MS.gene00494:CDS
GGAACATACTTGAGCCAAAC+AGG 0.423416 1.2:+4970491 None:intergenic
GTCCCTACGTTTGTGCTGAA+TGG 0.427816 1.2:-4970623 MS.gene00494:CDS
TCTTTACTTAGTGTTGCTGT+GGG 0.428806 1.2:-4968052 MS.gene00494:CDS
GCAACGGTTACATTTGGAAA+TGG 0.429102 1.2:-4968806 MS.gene00494:CDS
ACCAAAGCATTGGTCGTCAT+TGG 0.431882 1.2:-4967399 MS.gene00494:CDS
GCCAATGACGACCAATGCTT+TGG 0.432093 1.2:+4967398 None:intergenic
TTCTTTACTTAGTGTTGCTG+TGG 0.433115 1.2:-4968053 MS.gene00494:CDS
AGAGAGTTTGTTTCAAACTC+AGG 0.436146 1.2:-4970266 MS.gene00494:CDS
TTATTGTCTTTGTGGGTTTG+TGG 0.439850 1.2:-4972361 MS.gene00494:CDS
TGACCCTACTGGAATTTCAT+TGG 0.446479 1.2:-4967116 MS.gene00494:CDS
CTTGGTTGTGCTTGAAGAAT+GGG 0.453865 1.2:-4967143 MS.gene00494:CDS
TTGGACACAAGGATCATCAT+TGG 0.454214 1.2:-4967627 MS.gene00494:CDS
TTCGTTACATTTCCAGGAGA+AGG 0.456508 1.2:+4970808 None:intergenic
GTTGGATAGGTTGGACTAAA+GGG 0.457143 1.2:-4967695 MS.gene00494:intron
TGGAAAGGCTTACACAAAAT+GGG 0.465526 1.2:-4970018 MS.gene00494:CDS
GTGGAGAACCAACACAGAAA+TGG 0.465677 1.2:-4967297 MS.gene00494:intron
TAGTGAAAGTGTTAACCTAA+AGG 0.466295 1.2:-4968092 MS.gene00494:CDS
GGTAAACTTACAACGGGATC+AGG 0.468492 1.2:+4969930 None:intergenic
AAATCTTACCATTTCTGTGT+TGG 0.468836 1.2:+4967289 None:intergenic
TCAAATTAATACCAGAATGT+TGG 0.472200 1.2:-4967914 MS.gene00494:intron
TGGTCCAATAATTATGTCTC+AGG 0.477103 1.2:-4970242 MS.gene00494:intron
TTGGGTTTAAAGTTCTCGTT+GGG 0.479071 1.2:+4969650 None:intergenic
ACTTTGAAACATGGAATGTT+GGG 0.479098 1.2:-4967886 MS.gene00494:CDS
TTATTTCAAAAGGCTAAAGA+TGG 0.480940 1.2:-4970877 MS.gene00494:CDS
GTGGCCAGACTTATTTCAAA+AGG 0.481426 1.2:-4970887 MS.gene00494:CDS
CGGGTGTGCTTCTTGGATAG+TGG 0.483949 1.2:+4972260 None:intergenic
TTTGTGCTGAATGGAATTAT+GGG 0.485197 1.2:-4970614 MS.gene00494:intron
AATGGAGGAACTTCCAGTTA+TGG 0.487302 1.2:+4967652 None:intergenic
CACTTTGAAACATGGAATGT+TGG 0.488183 1.2:-4967887 MS.gene00494:CDS
TCTTGGTTGTGCTTGAAGAA+TGG 0.488347 1.2:-4967144 MS.gene00494:CDS
TCTGTTCTGAAAGCCATCCC+TGG 0.489582 1.2:+4970470 None:intergenic
GTCTAGATACTGGTGTACCT+TGG 0.490231 1.2:-4969977 MS.gene00494:CDS
TCTAGATACTGGTGTACCTT+GGG 0.490711 1.2:-4969976 MS.gene00494:CDS
CGACACAAAATCTGCGGCAA+CGG 0.500314 1.2:-4968822 MS.gene00494:CDS
CCGTGGATACTACATTTGAT+TGG 0.501200 1.2:-4968575 MS.gene00494:CDS
GAATGGGGAGGTGACCCTAC+TGG 0.503961 1.2:-4967127 MS.gene00494:CDS
GATCCTACAGTCACATGGCT+TGG 0.504519 1.2:-4969008 MS.gene00494:CDS
CCAAAATGCAGGACAAATTG+TGG 0.507299 1.2:-4967316 MS.gene00494:CDS
ATGGCTGTAGGTCTAGATAC+TGG 0.511595 1.2:-4969987 MS.gene00494:CDS
GCTGCCACTCGGCGCGTCAA+AGG 0.512668 1.2:+4967477 None:intergenic
GAATGGGAAATTGGTGCTCC+TGG 0.513051 1.2:-4970038 MS.gene00494:CDS
TGTTGGATAGGTTGGACTAA+AGG 0.513449 1.2:-4967696 MS.gene00494:intron
ATGTGGACTGAGAATTGGTC+TGG 0.514008 1.2:-4969626 MS.gene00494:CDS
GCTCAAGTATGTTCCAGGGA+TGG 0.514701 1.2:-4970483 MS.gene00494:CDS
GAGAGTTTGTTTCAAACTCA+GGG 0.516652 1.2:-4970265 MS.gene00494:CDS
CTAGACCCTTCAATGTTACT+GGG 0.516715 1.2:+4967855 None:intergenic
CTTACCTTGTACCATGTCAA+AGG 0.519467 1.2:+4967593 None:intergenic
TTCTTTGTCCATCAATCACA+AGG 0.521053 1.2:+4972305 None:intergenic
ATGTCCATTCCAAAATACAT+AGG 0.521663 1.2:+4970834 None:intergenic
CTACTCATATCTAGTGCCAC+TGG 0.522187 1.2:+4967451 None:intergenic
TGGATAGGTATCATATTCCT+CGG 0.523367 1.2:-4967192 MS.gene00494:intron
AACTTCCAGTTATGGTATGA+AGG 0.525743 1.2:+4967660 None:intergenic
ATGAATGTAGGAACTGTGTA+TGG 0.525837 1.2:-4968142 MS.gene00494:intron
TTACCATGTGCTATATATGC+AGG 0.531919 1.2:+4967376 None:intergenic
TCTTGCTTGCACATGTCCCA+AGG 0.532274 1.2:+4969960 None:intergenic
AGATATGAGTAGCATGGGAA+AGG 0.533528 1.2:-4967440 MS.gene00494:CDS
TTGGCAGAAATGGTCTTACA+AGG 0.535055 1.2:-4967810 MS.gene00494:intron
TTTGGGTTTAAAGTTCTCGT+TGG 0.535843 1.2:+4969649 None:intergenic
GTTAGGCCCAGTAACATTGA+AGG 0.535870 1.2:-4967861 MS.gene00494:CDS
GCCACTGGATCGCTGCCACT+CGG 0.538573 1.2:+4967466 None:intergenic
AGGAACTGTGTATGGAGGAT+TGG 0.540099 1.2:-4968134 MS.gene00494:CDS
TATGATGGAATCGTCGTCAC+TGG 0.542393 1.2:+4968524 None:intergenic
TGGATAAACGACCAAAGCAT+TGG 0.545055 1.2:-4967409 MS.gene00494:CDS
TCGTCGTCACTGGAGTAGGC+AGG 0.545444 1.2:+4968534 None:intergenic
AGGGGACAAGAGACTTGTCT+TGG 0.546148 1.2:-4967829 MS.gene00494:CDS
ACTCTTACCATAAATTCAGC+AGG 0.547224 1.2:-4968282 MS.gene00494:CDS
TCATAGACCAACTGAAGACT+TGG 0.549584 1.2:-4969471 MS.gene00494:CDS
ACATTGAAGGGTCTAGATGA+GGG 0.549862 1.2:-4967848 MS.gene00494:CDS
TGAGTATGGACCTGTGGAAT+GGG 0.552441 1.2:-4970054 MS.gene00494:CDS
GAGTCCAAGTGGGAACGTCT+TGG 0.553534 1.2:-4967161 MS.gene00494:CDS
GGTATCATATTCCTCGGTCA+TGG 0.554459 1.2:-4967186 MS.gene00494:CDS
GGAATCGTCGTCACTGGAGT+AGG 0.554946 1.2:+4968530 None:intergenic
TGATCCTTGTGTCCAATCAA+TGG 0.555014 1.2:+4967634 None:intergenic
GATATGAGTAGCATGGGAAA+GGG 0.555262 1.2:-4967439 MS.gene00494:CDS
GCACCAATTTCCCATTCCAC+AGG 0.555297 1.2:+4970044 None:intergenic
TTTCCAAGCCATGTGACTGT+AGG 0.556295 1.2:+4969005 None:intergenic
ACAACCTTTGACATGGTACA+AGG 0.556753 1.2:-4967597 MS.gene00494:intron
GGACTGAGAATTGGTCTGGC+TGG 0.561829 1.2:-4969622 MS.gene00494:intron
CCAATCAAATGTAGTATCCA+CGG 0.564185 1.2:+4968575 None:intergenic
GCACTAGATATGAGTAGCAT+GGG 0.566286 1.2:-4967445 MS.gene00494:CDS
GGCACTAGATATGAGTAGCA+TGG 0.566466 1.2:-4967446 MS.gene00494:CDS
GGAAATTGGTGCTCCTGGAA+AGG 0.566691 1.2:-4970033 MS.gene00494:CDS
TGGGCTGCTCAAATGGCTGT+AGG 0.566955 1.2:-4969999 MS.gene00494:CDS
CATAGGTTTGAATAACATCA+AGG 0.569765 1.2:+4970851 None:intergenic
ATGAGTATGGACCTGTGGAA+TGG 0.571228 1.2:-4970055 MS.gene00494:CDS
TCCTCCATTGATTGGACACA+AGG 0.572202 1.2:-4967638 MS.gene00494:CDS
TTTCAAAAGGCTAAAGATGG+AGG 0.574864 1.2:-4970874 MS.gene00494:CDS
TTCCATTCAGCACAAACGTA+GGG 0.575351 1.2:+4970621 None:intergenic
GTCAAGCTAGCACAACAAGC+TGG 0.575439 1.2:-4970669 MS.gene00494:CDS
CTGTGGATCCTACAGTCACA+TGG 0.578432 1.2:-4969013 MS.gene00494:CDS
GGATCCACAGAAATCAAAGC+TGG 0.580873 1.2:+4969026 None:intergenic
GCCGAGTGGCAGCGATCCAG+TGG 0.582197 1.2:-4967467 MS.gene00494:CDS
GCTGAATTTATGGTAAGAGT+AGG 0.582723 1.2:+4968285 None:intergenic
TGAGCCAGCTTTGATTTCTG+TGG 0.583476 1.2:-4969030 MS.gene00494:CDS
TCACCAATGAAATTCCAGTA+GGG 0.584721 1.2:+4967113 None:intergenic
AACATTGAAGGGTCTAGATG+AGG 0.588983 1.2:-4967849 MS.gene00494:CDS
TTTGGCTCAAGTATGTTCCA+GGG 0.591443 1.2:-4970487 MS.gene00494:CDS
TTCACCAATGAAATTCCAGT+AGG 0.593759 1.2:+4967112 None:intergenic
CAATCAAATGTAGTATCCAC+GGG 0.596448 1.2:+4968576 None:intergenic
TTGTAGATTGACACTTGCAA+TGG 0.599307 1.2:-4969695 MS.gene00494:intron
GCAAATATGATCTACCACCT+TGG 0.599730 1.2:-4968784 MS.gene00494:CDS
ACAACCAAGACGTTCCCACT+TGG 0.601417 1.2:+4967157 None:intergenic
GAAAGTGTTAACCTAAAGGT+CGG 0.607496 1.2:-4968088 MS.gene00494:CDS
AAGGAATGCAGCACAGACAC+TGG 0.612057 1.2:+4968853 None:intergenic
AGAACTTTAAACCCAAAATG+TGG 0.614315 1.2:-4969643 MS.gene00494:CDS
TGTGCTTCTTGGATAGTGGA+TGG 0.615066 1.2:+4972264 None:intergenic
TTGGTCTGCACTTTGAAACA+TGG 0.615627 1.2:-4967895 MS.gene00494:CDS
GGAAGAATGCTGACAGACCA+AGG 0.618216 1.2:+4968767 None:intergenic
CGGTCATGGTTGAGTCCAAG+TGG 0.619900 1.2:-4967172 MS.gene00494:CDS
GCGATTCTTCAGATTATCTG+TGG 0.622203 1.2:-4968467 MS.gene00494:CDS
GAGTATGCCAAGTCTTCAGT+TGG 0.624897 1.2:+4969464 None:intergenic
TATAGGTACACTGATTTCGG+TGG 0.628326 1.2:-4969503 MS.gene00494:intron
CGAGAATGAGTATGGACCTG+TGG 0.628829 1.2:-4970060 MS.gene00494:CDS
TTAGGCCCAGTAACATTGAA+GGG 0.630859 1.2:-4967860 MS.gene00494:CDS
AGCATCATAATCATAGCTTG+TGG 0.636529 1.2:+4969211 None:intergenic
TGTGATGAATGTAATTACGC+TGG 0.639969 1.2:-4967352 MS.gene00494:CDS
TTGGTTGTGCTTGAAGAATG+GGG 0.644178 1.2:-4967142 MS.gene00494:CDS
TACCATATAGTAGTTAACAA+AGG 0.653367 1.2:+4969412 None:intergenic
TCTTTGTCCATCAATCACAA+GGG 0.658868 1.2:+4972306 None:intergenic
GCTAGATTCATACAAAATCG+TGG 0.659974 1.2:-4969437 MS.gene00494:CDS
CCATAAAAGGATGACTCCCG+TGG 0.660532 1.2:-4968592 MS.gene00494:CDS
TGGCCTGCATATATAGCACA+TGG 0.662930 1.2:-4967379 MS.gene00494:CDS
CATTGAAGGGTCTAGATGAG+GGG 0.664668 1.2:-4967847 MS.gene00494:CDS
ACAACCTTTGACGCGCCGAG+TGG 0.672410 1.2:-4967481 MS.gene00494:CDS
AATGTAGGAACTGTGTATGG+AGG 0.675173 1.2:-4968139 MS.gene00494:intron
ATTCCATTCAGCACAAACGT+AGG 0.678066 1.2:+4970620 None:intergenic
CTTTGAAACATGGAATGTTG+GGG 0.679854 1.2:-4967885 MS.gene00494:CDS
TCCTTGTGTCCAATCAATGG+AGG 0.680608 1.2:+4967637 None:intergenic
ATTTGATTGTAGTATCATGG+AGG 0.681855 1.2:-4969272 MS.gene00494:intron
CTTGGACTCAACCATGACCG+AGG 0.682721 1.2:+4967175 None:intergenic
GGTCATGGTTGAGTCCAAGT+GGG 0.689731 1.2:-4967171 MS.gene00494:CDS
AAACTACGACACAAAATCTG+CGG 0.691374 1.2:-4968828 MS.gene00494:CDS
AGTTTGTTTCAAACTCAGGG+TGG 0.697300 1.2:-4970262 MS.gene00494:CDS
CTATCCAAGAAGCACACCCG+AGG 0.711494 1.2:-4972257 MS.gene00494:intron
GTTGTGCTTGAAGAATGGGG+AGG 0.774502 1.2:-4967139 MS.gene00494:CDS
AGAATGCTGACAGACCAAGG+TGG 0.820211 1.2:+4968770 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAGAAAATAAAGAA+AGG + chr1.2:4967748-4967767 None:intergenic 10.0%
!!! AACTTAACATTTTAAATAAT+TGG + chr1.2:4968132-4968151 None:intergenic 10.0%
!!! TAATTTAAATGAACTTTTTA+AGG + chr1.2:4967590-4967609 None:intergenic 10.0%
!!! TATTTATAGCTTTAAATTAA+TGG + chr1.2:4969909-4969928 None:intergenic 10.0%
!!! TTTTATTATAAAGTTTTTGT+TGG - chr1.2:4969290-4969309 MS.gene00494:intron 10.0%
!!! TTTTTTTCTCAAAAAAATTA+AGG + chr1.2:4968451-4968470 None:intergenic 10.0%
!! AAAATGTTAAGTTATTTGAT+TGG - chr1.2:4968139-4968158 MS.gene00494:intron 15.0%
!! AAAGCTATAAATATTTCATT+TGG - chr1.2:4969916-4969935 MS.gene00494:intron 15.0%
!! AAGCTATAAATATTTCATTT+GGG - chr1.2:4969917-4969936 MS.gene00494:intron 15.0%
!! AATATATAACAAAAATACAC+TGG + chr1.2:4967864-4967883 None:intergenic 15.0%
!! AATGAATAAATAAAAGAGAA+AGG + chr1.2:4967330-4967349 None:intergenic 15.0%
!! ATTAAGTTATATATGAATGT+AGG - chr1.2:4971327-4971346 MS.gene00494:intron 15.0%
!! ATTTAATCTAATACTGAAAT+TGG - chr1.2:4969376-4969395 MS.gene00494:intron 15.0%
!! CTTAAAACACATTAAAAATT+TGG - chr1.2:4971076-4971095 MS.gene00494:intron 15.0%
!! TAATTCAAAAATATTATGGA+GGG + chr1.2:4967475-4967494 None:intergenic 15.0%
!! TTAACAAAAAAAATCAAACT+AGG + chr1.2:4970575-4970594 None:intergenic 15.0%
!! TTAATTCAAAAATATTATGG+AGG + chr1.2:4967476-4967495 None:intergenic 15.0%
!!! AACAAACATATACATAATTT+TGG + chr1.2:4967376-4967395 None:intergenic 15.0%
!!! AACAGTCAAATTTTAAAATA+AGG - chr1.2:4967656-4967675 MS.gene00494:CDS 15.0%
!!! TTTTAATTAATCCAAACTTT+TGG - chr1.2:4969126-4969145 MS.gene00494:intron 15.0%
!!! TTTTTACTTATATTAGTAAC+CGG + chr1.2:4967894-4967913 None:intergenic 15.0%
!!! TTTTTTGTTAATGTAATCTT+AGG - chr1.2:4970584-4970603 MS.gene00494:intron 15.0%
!!! TTTTTTTTAATCTTTTGGAT+AGG - chr1.2:4972274-4972293 MS.gene00494:CDS 15.0%
!! AAAATAAAAAATGTGCATGT+TGG + chr1.2:4968051-4968070 None:intergenic 20.0%
!! AAATAATTATTTATGTGCAG+AGG - chr1.2:4968963-4968982 MS.gene00494:intron 20.0%
!! AAATATTTCATTTGGGAATT+GGG - chr1.2:4969924-4969943 MS.gene00494:intron 20.0%
!! AAGATAAAACTAAAAGCAAA+AGG - chr1.2:4968301-4968320 MS.gene00494:CDS 20.0%
!! ATAAGGTTTAAATTGTTTCA+TGG - chr1.2:4970316-4970335 MS.gene00494:CDS 20.0%
!! CATTTAATAATTGATGTATG+TGG + chr1.2:4967968-4967987 None:intergenic 20.0%
!! CTTTCACTAAATGTTAATTT+AGG + chr1.2:4971378-4971397 None:intergenic 20.0%
!! TAAATATTTCATTTGGGAAT+TGG - chr1.2:4969923-4969942 MS.gene00494:intron 20.0%
!! TAAATTGGAATTTATCATGA+AGG + chr1.2:4971291-4971310 None:intergenic 20.0%
!! TATATGGTATATGAATATGA+TGG - chr1.2:4970083-4970102 MS.gene00494:intron 20.0%
!! TATATTTGATTGTAGTATCA+TGG - chr1.2:4970206-4970225 MS.gene00494:intron 20.0%
!! TTAAACCATATTCGTAAAAT+TGG - chr1.2:4968192-4968211 MS.gene00494:intron 20.0%
!! TTCTTTACAAAACTTTCATT+AGG + chr1.2:4971166-4971185 None:intergenic 20.0%
!!! AAATTTTACTAATTTCATGC+AGG - chr1.2:4970850-4970869 MS.gene00494:CDS 20.0%
!!! AATGAAAGTTTTGTAAAGAA+TGG - chr1.2:4971166-4971185 MS.gene00494:intron 20.0%
!!! CTTCAATAAAGTAACAATTT+TGG + chr1.2:4970552-4970571 None:intergenic 20.0%
!!! CTTTATGTAAATTTTTCAGA+TGG + chr1.2:4970418-4970437 None:intergenic 20.0%
!!! GATTTTATTATTGTCTTTGT+GGG - chr1.2:4967113-4967132 MS.gene00494:CDS 20.0%
!!! TAAGCAAAAATTTGTTCTTA+AGG + chr1.2:4967993-4968012 None:intergenic 20.0%
!!! TATAAAAAGATATTGACTTG+TGG + chr1.2:4968234-4968253 None:intergenic 20.0%
!!! TGATTTTATTATTGTCTTTG+TGG - chr1.2:4967112-4967131 MS.gene00494:CDS 20.0%
!!! TTAATGTGTTTTAAGAAGTT+AGG + chr1.2:4971071-4971090 None:intergenic 20.0%
!!! TTATTCAAACCTATGTATTT+TGG - chr1.2:4968638-4968657 MS.gene00494:intron 20.0%
!!! TTTTATCTTACCTATTCTAT+AGG - chr1.2:4969961-4969980 MS.gene00494:CDS 20.0%
! AATCTATGTTGTATAGATAC+AGG + chr1.2:4968489-4968508 None:intergenic 25.0%
! ACTAATGTTTACACTGAAAA+TGG + chr1.2:4971143-4971162 None:intergenic 25.0%
! ACTTCAAAAAACTTCTAACA+TGG + chr1.2:4970817-4970836 None:intergenic 25.0%
! AGATTTATTGAAAATGCAGA+TGG + chr1.2:4971960-4971979 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - chr1.2:4967929-4967948 MS.gene00494:intron 25.0%
! GTAGTATAGATACTTATTTG+TGG - chr1.2:4968355-4968374 MS.gene00494:intron 25.0%
! GTTAAGTTATTTGATTGGTA+AGG - chr1.2:4968144-4968163 MS.gene00494:intron 25.0%
! TACCATATAGTAGTTAACAA+AGG + chr1.2:4970072-4970091 None:intergenic 25.0%
! TCAAATTAATACCAGAATGT+TGG - chr1.2:4971567-4971586 MS.gene00494:intron 25.0%
! TGCTTATATTAATGATCAGA+GGG - chr1.2:4968007-4968026 MS.gene00494:intron 25.0%
! TTAAAAAACAACCTTTGACA+TGG - chr1.2:4971877-4971896 MS.gene00494:intron 25.0%
! TTAACGCCTTTCAAAATATT+AGG - chr1.2:4970368-4970387 MS.gene00494:intron 25.0%
! TTATTTCAAAAGGCTAAAGA+TGG - chr1.2:4968604-4968623 MS.gene00494:CDS 25.0%
! TTCATTGCATAATATATGCA+GGG + chr1.2:4967723-4967742 None:intergenic 25.0%
! TTGCTTATATTAATGATCAG+AGG - chr1.2:4968006-4968025 MS.gene00494:intron 25.0%
! TTTACCTGAGACATAATTAT+TGG + chr1.2:4969246-4969265 None:intergenic 25.0%
!! AAGGAATTTCTAAGAAGAAA+AGG + chr1.2:4971272-4971291 None:intergenic 25.0%
!! ATTTTTCTTATGCAATGTCT+TGG - chr1.2:4968506-4968525 MS.gene00494:CDS 25.0%
!! CAAATTTTATGTTGTTGGAT+AGG - chr1.2:4971773-4971792 MS.gene00494:intron 25.0%
!! TGAGACAAATTTTATGTTGT+TGG - chr1.2:4971768-4971787 MS.gene00494:intron 25.0%
!! TTTCATCATGTTCACAATTT+TGG + chr1.2:4969193-4969212 None:intergenic 25.0%
!!! CAAAGAAGAATTTTGATATC+TGG - chr1.2:4967192-4967211 MS.gene00494:intron 25.0%
!!! GTTCTACATGTTTTTGTTAA+TGG - chr1.2:4971226-4971245 MS.gene00494:intron 25.0%
AAATCTTACCATTTCTGTGT+TGG + chr1.2:4972195-4972214 None:intergenic 30.0%
AACTAATGTTGTACACATGT+TGG + chr1.2:4967276-4967295 None:intergenic 30.0%
AAGTTGGAATGTAGTAAACT+AGG - chr1.2:4967828-4967847 MS.gene00494:CDS 30.0%
AATATCTTCGTTACATTTCC+AGG + chr1.2:4968682-4968701 None:intergenic 30.0%
AATCAGTGTACCTATAGAAT+AGG + chr1.2:4969974-4969993 None:intergenic 30.0%
ACCATATTCGTAAAATTGGA+AGG - chr1.2:4968196-4968215 MS.gene00494:intron 30.0%
ACTAATTTCATGCAGGTTAA+TGG - chr1.2:4970857-4970876 MS.gene00494:CDS 30.0%
AGAACTTTAAACCCAAAATG+TGG - chr1.2:4969838-4969857 MS.gene00494:intron 30.0%
AGTTATTTGATTGGTAAGGA+AGG - chr1.2:4968148-4968167 MS.gene00494:intron 30.0%
ATGTCCATTCCAAAATACAT+AGG + chr1.2:4968650-4968669 None:intergenic 30.0%
ATGTTGTATAGATACAGGTA+TGG + chr1.2:4968484-4968503 None:intergenic 30.0%
ATTGAAACTCCAACCTTAAA+TGG + chr1.2:4969044-4969063 None:intergenic 30.0%
ATTGGTAAGGAAGGATAATA+TGG - chr1.2:4968157-4968176 MS.gene00494:intron 30.0%
ATTTGATTGTAGTATCATGG+AGG - chr1.2:4970209-4970228 MS.gene00494:intron 30.0%
CATAGGTTTGAATAACATCA+AGG + chr1.2:4968633-4968652 None:intergenic 30.0%
CTCAGTTCATGATAAGATTA+TGG - chr1.2:4970525-4970544 MS.gene00494:intron 30.0%
CTCCTTTGTTAACTACTATA+TGG - chr1.2:4970067-4970086 MS.gene00494:intron 30.0%
GAGAAAGGAAAGCAATAATT+TGG + chr1.2:4967315-4967334 None:intergenic 30.0%
GATGAATATGGTATGCAATA+AGG - chr1.2:4970299-4970318 MS.gene00494:CDS 30.0%
GGTACAAATTTGAAGGATAA+AGG - chr1.2:4969694-4969713 MS.gene00494:intron 30.0%
GTTCATTGCATAATATATGC+AGG + chr1.2:4967724-4967743 None:intergenic 30.0%
TACTTATATTAGTAACCGGA+GGG + chr1.2:4967890-4967909 None:intergenic 30.0%
TATACATCATGCCAAAAGTT+TGG + chr1.2:4969140-4969159 None:intergenic 30.0%
TATGTTTCTTAATGCAGATG+TGG - chr1.2:4968575-4968594 MS.gene00494:CDS 30.0%
TCATTGCATAATATATGCAG+GGG + chr1.2:4967722-4967741 None:intergenic 30.0%
TCGAACAAGATAATACTAAC+CGG + chr1.2:4971459-4971478 None:intergenic 30.0%
TGCATACCATATTCATCAAT+AGG + chr1.2:4970296-4970315 None:intergenic 30.0%
TGGCATGATGTATATATGTT+AGG - chr1.2:4969146-4969165 MS.gene00494:intron 30.0%
TGGTAAGATTTCATATAACG+AGG - chr1.2:4972204-4972223 MS.gene00494:intron 30.0%
TGTCAATCTACAACATAGTT+CGG + chr1.2:4969779-4969798 None:intergenic 30.0%
TGTTGTATAGATACAGGTAT+GGG + chr1.2:4968483-4968502 None:intergenic 30.0%
TTACTTATATTAGTAACCGG+AGG + chr1.2:4967891-4967910 None:intergenic 30.0%
TTGTTATATATTACACCCTC+CGG - chr1.2:4967872-4967891 MS.gene00494:CDS 30.0%
TTTGTGCTGAATGGAATTAT+GGG - chr1.2:4968867-4968886 MS.gene00494:CDS 30.0%
TTTGTTAATGGTCAACTTTC+AGG - chr1.2:4971238-4971257 MS.gene00494:intron 30.0%
! AAAACTACAGTTTTGCAATC+AGG + chr1.2:4970738-4970757 None:intergenic 30.0%
! CAAAACTGTAGTTTTCAACA+CGG - chr1.2:4970743-4970762 MS.gene00494:intron 30.0%
! CTTTTACTAATCCAAAATGC+AGG - chr1.2:4972154-4972173 MS.gene00494:intron 30.0%
! TATCATGGAGGAACTAATTT+TGG - chr1.2:4970221-4970240 MS.gene00494:intron 30.0%
! TCCTTCCAATTTTACGAATA+TGG + chr1.2:4968200-4968219 None:intergenic 30.0%
! TTTTATGTTGTTGGATAGGT+TGG - chr1.2:4971777-4971796 MS.gene00494:intron 30.0%
!! ACTTTGAAACATGGAATGTT+GGG - chr1.2:4971595-4971614 MS.gene00494:intron 30.0%
!! CAAACCTATGTATTTTGGAA+TGG - chr1.2:4968643-4968662 MS.gene00494:intron 30.0%
!! GGAAGTCCTAATATTTTGAA+AGG + chr1.2:4970377-4970396 None:intergenic 30.0%
!! TGTTTGTTGTTACTTAATCG+TGG - chr1.2:4967388-4967407 MS.gene00494:CDS 30.0%
!! TTCTATAGGTACACTGATTT+CGG - chr1.2:4969975-4969994 MS.gene00494:CDS 30.0%
!!! ACATAATTTTGGTTCATGCA+TGG + chr1.2:4967365-4967384 None:intergenic 30.0%
!!! TTAGCCTTTTGAAATAAGTC+TGG + chr1.2:4968601-4968620 None:intergenic 30.0%
AAACTACGACACAAAATCTG+CGG - chr1.2:4970653-4970672 MS.gene00494:CDS 35.0%
AACAGACAATGAGCCATTTA+AGG - chr1.2:4969028-4969047 MS.gene00494:CDS 35.0%
AACATGACCTGCTGAATTTA+TGG + chr1.2:4971209-4971228 None:intergenic 35.0%
AACTTCCAGTTATGGTATGA+AGG + chr1.2:4971824-4971843 None:intergenic 35.0%
AATGTTGTACACATGTTGGA+TGG + chr1.2:4967272-4967291 None:intergenic 35.0%
ACCCACAAAATGGTGAAAAA+AGG + chr1.2:4967417-4967436 None:intergenic 35.0%
ACTCTTACCATAAATTCAGC+AGG - chr1.2:4971199-4971218 MS.gene00494:intron 35.0%
ACTGACTAAATGAGATGTCT+GGG - chr1.2:4967684-4967703 MS.gene00494:CDS 35.0%
AGCATCATAATCATAGCTTG+TGG + chr1.2:4970273-4970292 None:intergenic 35.0%
ATGAATGTAGGAACTGTGTA+TGG - chr1.2:4971339-4971358 MS.gene00494:intron 35.0%
ATGGACATAGCTTCCATAAA+AGG - chr1.2:4970876-4970895 MS.gene00494:CDS 35.0%
CAATCAAATGTAGTATCCAC+GGG + chr1.2:4970908-4970927 None:intergenic 35.0%
CAGATGGTCATATGTAACAT+TGG + chr1.2:4971944-4971963 None:intergenic 35.0%
CATCATAGCAAATGCACTTT+GGG - chr1.2:4970973-4970992 MS.gene00494:intron 35.0%
CCAATCAAATGTAGTATCCA+CGG + chr1.2:4970909-4970928 None:intergenic 35.0%
CCACAAAATGGTGAAAAAAG+GGG + chr1.2:4967415-4967434 None:intergenic 35.0%
CCCACAAAATGGTGAAAAAA+GGG + chr1.2:4967416-4967435 None:intergenic 35.0%
CTGCTAAGGTAAACTTACAA+CGG + chr1.2:4969561-4969580 None:intergenic 35.0%
CTTTATGTTCACTTGCGTAT+TGG - chr1.2:4968836-4968855 MS.gene00494:CDS 35.0%
GACTTCCAAATGAACCAAAA+TGG - chr1.2:4970390-4970409 MS.gene00494:intron 35.0%
GATGCTCCTATTGATGAATA+TGG - chr1.2:4970287-4970306 MS.gene00494:CDS 35.0%
GCAACGCTTCTTATTGTAAT+TGG + chr1.2:4969318-4969337 None:intergenic 35.0%
GCTAGATTCATACAAAATCG+TGG - chr1.2:4970044-4970063 MS.gene00494:CDS 35.0%
GCTGAATTTATGGTAAGAGT+AGG + chr1.2:4971199-4971218 None:intergenic 35.0%
GCTTGGAAATAAAAACCTTG+AGG - chr1.2:4970490-4970509 MS.gene00494:CDS 35.0%
GTCATATGTAACATTGGCAA+AGG + chr1.2:4971938-4971957 None:intergenic 35.0%
GTTTGTGCTGAATGGAATTA+TGG - chr1.2:4968866-4968885 MS.gene00494:CDS 35.0%
TCACCAATGAAATTCCAGTA+GGG + chr1.2:4972371-4972390 None:intergenic 35.0%
TCTTTGTCCATCAATCACAA+GGG + chr1.2:4967178-4967197 None:intergenic 35.0%
TGATAGATCGAGAATGAGTA+TGG - chr1.2:4969413-4969432 MS.gene00494:intron 35.0%
TGCTAAGGTAAACTTACAAC+GGG + chr1.2:4969560-4969579 None:intergenic 35.0%
TGGAAAGGCTTACACAAAAT+GGG - chr1.2:4969463-4969482 MS.gene00494:CDS 35.0%
TGGATAGGTATCATATTCCT+CGG - chr1.2:4972289-4972308 MS.gene00494:CDS 35.0%
TGGTCCAATAATTATGTCTC+AGG - chr1.2:4969239-4969258 MS.gene00494:CDS 35.0%
TGTGATGAATGTAATTACGC+TGG - chr1.2:4972129-4972148 MS.gene00494:intron 35.0%
TGTGTTTAGTGTTAGAGAAG+AGG - chr1.2:4969673-4969692 MS.gene00494:CDS 35.0%
TTACCATGTGCTATATATGC+AGG + chr1.2:4972108-4972127 None:intergenic 35.0%
TTATTGTCTTTGTGGGTTTG+TGG - chr1.2:4967120-4967139 MS.gene00494:CDS 35.0%
TTCACCAATGAAATTCCAGT+AGG + chr1.2:4972372-4972391 None:intergenic 35.0%
TTCTTTGTCCATCAATCACA+AGG + chr1.2:4967179-4967198 None:intergenic 35.0%
TTGTAGATTGACACTTGCAA+TGG - chr1.2:4969786-4969805 MS.gene00494:intron 35.0%
TTTCAAAAGGCTAAAGATGG+AGG - chr1.2:4968607-4968626 MS.gene00494:CDS 35.0%
! AGAGAGTTTGTTTCAAACTC+AGG - chr1.2:4969215-4969234 MS.gene00494:CDS 35.0%
! CAATTCTCAGTCCACATTTT+GGG + chr1.2:4969852-4969871 None:intergenic 35.0%
! CATAGCTTGTGGCAATAAAA+AGG + chr1.2:4970262-4970281 None:intergenic 35.0%
! CTTGCGTACATAAGTTTTCT+CGG - chr1.2:4968537-4968556 MS.gene00494:CDS 35.0%
! GAGAAGAGGTACAAATTTGA+AGG - chr1.2:4969687-4969706 MS.gene00494:CDS 35.0%
! GAGAGTTTGTTTCAAACTCA+GGG - chr1.2:4969216-4969235 MS.gene00494:CDS 35.0%
! TACTGACTAAATGAGATGTC+TGG - chr1.2:4967683-4967702 MS.gene00494:CDS 35.0%
! TCTTTACTTAGTGTTGCTGT+GGG - chr1.2:4971429-4971448 MS.gene00494:intron 35.0%
! TTCTTTACTTAGTGTTGCTG+TGG - chr1.2:4971428-4971447 MS.gene00494:intron 35.0%
! TTGGGTTTAAAGTTCTCGTT+GGG + chr1.2:4969834-4969853 None:intergenic 35.0%
! TTTGGGTTTAAAGTTCTCGT+TGG + chr1.2:4969835-4969854 None:intergenic 35.0%
! TTTTCACCATTTTGTGGGTT+TGG - chr1.2:4967418-4967437 MS.gene00494:CDS 35.0%
!! AATTTTGGTCGAACATCTAG+TGG - chr1.2:4970236-4970255 MS.gene00494:intron 35.0%
!! ATTTTGTGTCGTAGTTTGCA+AGG + chr1.2:4970650-4970669 None:intergenic 35.0%
!! CACTTTGAAACATGGAATGT+TGG - chr1.2:4971594-4971613 MS.gene00494:intron 35.0%
!! CTTTGAAACATGGAATGTTG+GGG - chr1.2:4971596-4971615 MS.gene00494:intron 35.0%
!! GAACTTAGAAGTATTCACAC+AGG + chr1.2:4970129-4970148 None:intergenic 35.0%
!! TTTTTCAGATGGCTCCATTT+TGG + chr1.2:4970407-4970426 None:intergenic 35.0%
!!! CCCTTTTTTCACCATTTTGT+GGG - chr1.2:4967413-4967432 MS.gene00494:CDS 35.0%
AACATTGAAGGGTCTAGATG+AGG - chr1.2:4971632-4971651 MS.gene00494:intron 40.0%
AATGGAGGAACTTCCAGTTA+TGG + chr1.2:4971832-4971851 None:intergenic 40.0%
AATGTAGGAACTGTGTATGG+AGG - chr1.2:4971342-4971361 MS.gene00494:intron 40.0%
ACAACCTTTGACATGGTACA+AGG - chr1.2:4971884-4971903 MS.gene00494:intron 40.0%
ACATTGAAGGGTCTAGATGA+GGG - chr1.2:4971633-4971652 MS.gene00494:intron 40.0%
AGATATGAGTAGCATGGGAA+AGG - chr1.2:4972041-4972060 MS.gene00494:intron 40.0%
ATTCCATTCAGCACAAACGT+AGG + chr1.2:4968864-4968883 None:intergenic 40.0%
CCAAAATGCAGGACAAATTG+TGG - chr1.2:4972165-4972184 MS.gene00494:intron 40.0%
CCATCATAGCAAATGCACTT+TGG - chr1.2:4970972-4970991 MS.gene00494:intron 40.0%
CCGTGGATACTACATTTGAT+TGG - chr1.2:4970906-4970925 MS.gene00494:intron 40.0%
CTAGACCCTTCAATGTTACT+GGG + chr1.2:4971629-4971648 None:intergenic 40.0%
CTGACTAAATGAGATGTCTG+GGG - chr1.2:4967685-4967704 MS.gene00494:CDS 40.0%
CTGGAAAGGCTTACACAAAA+TGG - chr1.2:4969462-4969481 MS.gene00494:CDS 40.0%
CTTACCTTGTACCATGTCAA+AGG + chr1.2:4971891-4971910 None:intergenic 40.0%
CTTGGTTGTGCTTGAAGAAT+GGG - chr1.2:4972338-4972357 MS.gene00494:CDS 40.0%
GAGTCATAGACTTTACCTCA+AGG + chr1.2:4970508-4970527 None:intergenic 40.0%
GATATGAGTAGCATGGGAAA+GGG - chr1.2:4972042-4972061 MS.gene00494:intron 40.0%
GCAAATATGATCTACCACCT+TGG - chr1.2:4970697-4970716 MS.gene00494:CDS 40.0%
GCAACGGTTACATTTGGAAA+TGG - chr1.2:4970675-4970694 MS.gene00494:CDS 40.0%
GCACTAGATATGAGTAGCAT+GGG - chr1.2:4972036-4972055 MS.gene00494:intron 40.0%
GCGATTCTTCAGATTATCTG+TGG - chr1.2:4971014-4971033 MS.gene00494:intron 40.0%
GTGGCCAGACTTATTTCAAA+AGG - chr1.2:4968594-4968613 MS.gene00494:CDS 40.0%
TCATAGACCAACTGAAGACT+TGG - chr1.2:4970010-4970029 MS.gene00494:CDS 40.0%
TCTAGACCCTTCAATGTTAC+TGG + chr1.2:4971630-4971649 None:intergenic 40.0%
TCTAGATACTGGTGTACCTT+GGG - chr1.2:4969505-4969524 MS.gene00494:intron 40.0%
TCTTGGTTGTGCTTGAAGAA+TGG - chr1.2:4972337-4972356 MS.gene00494:CDS 40.0%
TGACCCTACTGGAATTTCAT+TGG - chr1.2:4972365-4972384 MS.gene00494:CDS 40.0%
TGATCCTTGTGTCCAATCAA+TGG + chr1.2:4971850-4971869 None:intergenic 40.0%
TGCATAATATATGCAGGGGT+CGG + chr1.2:4967718-4967737 None:intergenic 40.0%
TGGATAAACGACCAAAGCAT+TGG - chr1.2:4972072-4972091 MS.gene00494:intron 40.0%
TGTGTCGTGTCAATCATATC+AGG - chr1.2:4969599-4969618 MS.gene00494:intron 40.0%
TTAGGCCCAGTAACATTGAA+GGG - chr1.2:4971621-4971640 MS.gene00494:intron 40.0%
TTCCATTCAGCACAAACGTA+GGG + chr1.2:4968863-4968882 None:intergenic 40.0%
TTCGTTACATTTCCAGGAGA+AGG + chr1.2:4968676-4968695 None:intergenic 40.0%
TTGAGCCTTCATACCATAAC+TGG - chr1.2:4971816-4971835 MS.gene00494:intron 40.0%
TTGGACACAAGGATCATCAT+TGG - chr1.2:4971854-4971873 MS.gene00494:intron 40.0%
TTGGTTGTGCTTGAAGAATG+GGG - chr1.2:4972339-4972358 MS.gene00494:CDS 40.0%
! AGTTTGTTTCAAACTCAGGG+TGG - chr1.2:4969219-4969238 MS.gene00494:CDS 40.0%
! CATTTTGTGTAAGCCTTTCC+AGG + chr1.2:4969464-4969483 None:intergenic 40.0%
! CCAAAATGTGGACTGAGAAT+TGG - chr1.2:4969850-4969869 MS.gene00494:intron 40.0%
! CCAATTCTCAGTCCACATTT+TGG + chr1.2:4969853-4969872 None:intergenic 40.0%
! CCACAATTTGTCCTGCATTT+TGG + chr1.2:4972168-4972187 None:intergenic 40.0%
! GACAATGAGCCATTTAAGGT+TGG - chr1.2:4969032-4969051 MS.gene00494:CDS 40.0%
! GTTGGATAGGTTGGACTAAA+GGG - chr1.2:4971786-4971805 MS.gene00494:intron 40.0%
! TCAGAGGGTGTAATTACCAA+CGG - chr1.2:4968022-4968041 MS.gene00494:intron 40.0%
! TGTAGTTTTCAACACGGCAA+CGG - chr1.2:4970749-4970768 MS.gene00494:intron 40.0%
! TGTTGGATAGGTTGGACTAA+AGG - chr1.2:4971785-4971804 MS.gene00494:intron 40.0%
! TTGGCAGAAATGGTCTTACA+AGG - chr1.2:4971671-4971690 MS.gene00494:intron 40.0%
! TTTGGCTCAAGTATGTTCCA+GGG - chr1.2:4968994-4969013 MS.gene00494:CDS 40.0%
!! CCAAAGTGCATTTGCTATGA+TGG + chr1.2:4970975-4970994 None:intergenic 40.0%
!! TATAGGTACACTGATTTCGG+TGG - chr1.2:4969978-4969997 MS.gene00494:CDS 40.0%
!! TCTTGTTATTGCCGACCTTT+AGG + chr1.2:4971407-4971426 None:intergenic 40.0%
!! TTGGTCTGCACTTTGAAACA+TGG - chr1.2:4971586-4971605 MS.gene00494:intron 40.0%
!!! CCCCTTTTTTCACCATTTTG+TGG - chr1.2:4967412-4967431 MS.gene00494:CDS 40.0%
!!! TGGCTCCATTTTGGTTCATT+TGG + chr1.2:4970398-4970417 None:intergenic 40.0%
AGGAACTGTGTATGGAGGAT+TGG - chr1.2:4971347-4971366 MS.gene00494:intron 45.0%
ATGAGTATGGACCTGTGGAA+TGG - chr1.2:4969426-4969445 MS.gene00494:CDS 45.0%
ATGGCTGTAGGTCTAGATAC+TGG - chr1.2:4969494-4969513 MS.gene00494:CDS 45.0%
CAAAGTGCAGACCAACATTC+TGG + chr1.2:4971581-4971600 None:intergenic 45.0%
CACAAAGCCCTTGTGATTGA+TGG - chr1.2:4967168-4967187 MS.gene00494:CDS 45.0%
CATTGAAGGGTCTAGATGAG+GGG - chr1.2:4971634-4971653 MS.gene00494:intron 45.0%
CTACTCATATCTAGTGCCAC+TGG + chr1.2:4972033-4972052 None:intergenic 45.0%
CTGGAAGTTCCTCCATTGAT+TGG - chr1.2:4971835-4971854 MS.gene00494:intron 45.0%
GAGACTTGTCTTGGCAGAAA+TGG - chr1.2:4971661-4971680 MS.gene00494:intron 45.0%
GAGTATGCCAAGTCTTCAGT+TGG + chr1.2:4970020-4970039 None:intergenic 45.0%
GCATAATATATGCAGGGGTC+GGG + chr1.2:4967717-4967736 None:intergenic 45.0%
GCATGGGAAAGGGTGAAATA+TGG - chr1.2:4972052-4972071 MS.gene00494:intron 45.0%
GGAACATACTTGAGCCAAAC+AGG + chr1.2:4968993-4969012 None:intergenic 45.0%
GGATCCACAGAAATCAAAGC+TGG + chr1.2:4970458-4970477 None:intergenic 45.0%
GGATGACCAAACCCACAAAA+TGG + chr1.2:4967427-4967446 None:intergenic 45.0%
GGCACTAGATATGAGTAGCA+TGG - chr1.2:4972035-4972054 MS.gene00494:intron 45.0%
GGTAAACTTACAACGGGATC+AGG + chr1.2:4969554-4969573 None:intergenic 45.0%
GGTATCATATTCCTCGGTCA+TGG - chr1.2:4972295-4972314 MS.gene00494:CDS 45.0%
GTCTAGATACTGGTGTACCT+TGG - chr1.2:4969504-4969523 MS.gene00494:intron 45.0%
GTGGAGAACCAACACAGAAA+TGG - chr1.2:4972184-4972203 MS.gene00494:intron 45.0%
GTTAGGCCCAGTAACATTGA+AGG - chr1.2:4971620-4971639 MS.gene00494:intron 45.0%
GTTGTACACATGTTGGATGG+AGG + chr1.2:4967269-4967288 None:intergenic 45.0%
TACACATGTTGGATGGAGGT+TGG + chr1.2:4967265-4967284 None:intergenic 45.0%
TCCTTGTGTCCAATCAATGG+AGG + chr1.2:4971847-4971866 None:intergenic 45.0%
TGAGTATGGACCTGTGGAAT+GGG - chr1.2:4969427-4969446 MS.gene00494:CDS 45.0%
TGGCCTGCATATATAGCACA+TGG - chr1.2:4972102-4972121 MS.gene00494:intron 45.0%
TGTGCAGAGGATTTCCTGTT+TGG - chr1.2:4968976-4968995 MS.gene00494:intron 45.0%
TTTCCAAGCCATGTGACTGT+AGG + chr1.2:4970479-4970498 None:intergenic 45.0%
! ACATGGAATGTTGGGGTGTT+AGG - chr1.2:4971603-4971622 MS.gene00494:intron 45.0%
! ATGTGGACTGAGAATTGGTC+TGG - chr1.2:4969855-4969874 MS.gene00494:intron 45.0%
! CAGAGGGTGTAATTACCAAC+GGG - chr1.2:4968023-4968042 MS.gene00494:intron 45.0%
! GTTTGGCTCAAGTATGTTCC+AGG - chr1.2:4968993-4969012 MS.gene00494:CDS 45.0%
! TATGATGGAATCGTCGTCAC+TGG + chr1.2:4970960-4970979 None:intergenic 45.0%
! TCCTCCATTGATTGGACACA+AGG - chr1.2:4971843-4971862 MS.gene00494:intron 45.0%
! TGAGCCAGCTTTGATTTCTG+TGG - chr1.2:4970451-4970470 MS.gene00494:intron 45.0%
! TTGCTCTGGTCGCACATTTT+AGG - chr1.2:4971495-4971514 MS.gene00494:intron 45.0%
!! ACCAAAGCATTGGTCGTCAT+TGG - chr1.2:4972082-4972101 MS.gene00494:intron 45.0%
!! CACAAAATGGGCTGCTCAAA+TGG - chr1.2:4969475-4969494 MS.gene00494:CDS 45.0%
!! TGTGCTTCTTGGATAGTGGA+TGG + chr1.2:4967220-4967239 None:intergenic 45.0%
!!! AAAATTTTAGATTTTAAAAT+AGG + chr1.2:4967448-4967467 None:intergenic 5.0%
!!! AATTTTTTTTTTTAATCTTT+TGG - chr1.2:4972269-4972288 MS.gene00494:CDS 5.0%
!!! ATTTTAAAATCTAAAATTTT+TGG - chr1.2:4967448-4967467 MS.gene00494:CDS 5.0%
!!! ATTTTAGATAAAATATTTTA+TGG - chr1.2:4967624-4967643 MS.gene00494:CDS 5.0%
!!! ATTTTTTTTTTATTATAAGT+TGG - chr1.2:4967812-4967831 MS.gene00494:CDS 5.0%
!!! CTTATTTTTTTTTTTTTTTA+GGG + chr1.2:4969344-4969363 None:intergenic 5.0%
!!! TCTTATTTTTTTTTTTTTTT+AGG + chr1.2:4969345-4969364 None:intergenic 5.0%
!!! TTAATTTAGAATATATAAAT+TGG + chr1.2:4971306-4971325 None:intergenic 5.0%
!!! TTTTTAATTCAAAAATATTA+TGG + chr1.2:4967479-4967498 None:intergenic 5.0%
AAGGAATGCAGCACAGACAC+TGG + chr1.2:4970631-4970650 None:intergenic 50.0%
AATGGACATGAGCCTTCTCC+TGG - chr1.2:4968661-4968680 MS.gene00494:intron 50.0%
ACAACCAAGACGTTCCCACT+TGG + chr1.2:4972327-4972346 None:intergenic 50.0%
AGAATGCTGACAGACCAAGG+TGG + chr1.2:4970714-4970733 None:intergenic 50.0%
AGGGGACAAGAGACTTGTCT+TGG - chr1.2:4971652-4971671 MS.gene00494:intron 50.0%
ATGTTGGATGGAGGTTGGAG+TGG + chr1.2:4967260-4967279 None:intergenic 50.0%
CCATAAAAGGATGACTCCCG+TGG - chr1.2:4970889-4970908 MS.gene00494:CDS 50.0%
CGAACACGCTGATACTGCTA+AGG + chr1.2:4969575-4969594 None:intergenic 50.0%
CGACACAAAATCTGCGGCAA+CGG - chr1.2:4970659-4970678 MS.gene00494:CDS 50.0%
CGAGAATGAGTATGGACCTG+TGG - chr1.2:4969421-4969440 MS.gene00494:CDS 50.0%
CTGTGGATCCTACAGTCACA+TGG - chr1.2:4970468-4970487 MS.gene00494:CDS 50.0%
GAGTGGAATGAGTGTACCTC+GGG + chr1.2:4967243-4967262 None:intergenic 50.0%
GATCCTACAGTCACATGGCT+TGG - chr1.2:4970473-4970492 MS.gene00494:CDS 50.0%
GCACCAATTTCCCATTCCAC+AGG + chr1.2:4969440-4969459 None:intergenic 50.0%
GCCAATGACGACCAATGCTT+TGG + chr1.2:4972086-4972105 None:intergenic 50.0%
GCTCAAGTATGTTCCAGGGA+TGG - chr1.2:4968998-4969017 MS.gene00494:CDS 50.0%
GGAAGAATGCTGACAGACCA+AGG + chr1.2:4970717-4970736 None:intergenic 50.0%
GGACCTGTGGAATGGGAAAT+TGG - chr1.2:4969434-4969453 MS.gene00494:CDS 50.0%
GGAGTGGAATGAGTGTACCT+CGG + chr1.2:4967244-4967263 None:intergenic 50.0%
GGTCATGGTTGAGTCCAAGT+GGG - chr1.2:4972310-4972329 MS.gene00494:CDS 50.0%
GTCAAGCTAGCACAACAAGC+TGG - chr1.2:4968812-4968831 MS.gene00494:CDS 50.0%
GTCCCTACGTTTGTGCTGAA+TGG - chr1.2:4968858-4968877 MS.gene00494:CDS 50.0%
GTTGTGCTTGAAGAATGGGG+AGG - chr1.2:4972342-4972361 MS.gene00494:CDS 50.0%
TCTGCGGCAACGGTTACATT+TGG - chr1.2:4970669-4970688 MS.gene00494:CDS 50.0%
TCTTGCTTGCACATGTCCCA+AGG + chr1.2:4969524-4969543 None:intergenic 50.0%
TGCGACCAGAGCAACCAAAA+GGG + chr1.2:4971489-4971508 None:intergenic 50.0%
! CCACGGGAGTCATCCTTTTA+TGG + chr1.2:4970892-4970911 None:intergenic 50.0%
! GAATGGGAAATTGGTGCTCC+TGG - chr1.2:4969443-4969462 MS.gene00494:CDS 50.0%
! GGAAATTGGTGCTCCTGGAA+AGG - chr1.2:4969448-4969467 MS.gene00494:CDS 50.0%
! TAGTGTTGCTGTGGGTCTTC+CGG - chr1.2:4971437-4971456 MS.gene00494:intron 50.0%
! TGTTCGATGCACACCCCTTT+TGG - chr1.2:4971472-4971491 MS.gene00494:intron 50.0%
!! ATGTGCATGTTGGTTCCCGT+TGG + chr1.2:4968041-4968060 None:intergenic 50.0%
!! TCTGTTCTGAAAGCCATCCC+TGG + chr1.2:4969014-4969033 None:intergenic 50.0%
CGGGTGTGCTTCTTGGATAG+TGG + chr1.2:4967224-4967243 None:intergenic 55.0%
CGGTCATGGTTGAGTCCAAG+TGG - chr1.2:4972309-4972328 MS.gene00494:CDS 55.0%
CTTGGACTCAACCATGACCG+AGG + chr1.2:4972309-4972328 None:intergenic 55.0%
GAGTCCAAGTGGGAACGTCT+TGG - chr1.2:4972320-4972339 MS.gene00494:CDS 55.0%
GCGACCAGAGCAACCAAAAG+GGG + chr1.2:4971488-4971507 None:intergenic 55.0%
GGAATCGTCGTCACTGGAGT+AGG + chr1.2:4970954-4970973 None:intergenic 55.0%
GTGCGACCAGAGCAACCAAA+AGG + chr1.2:4971490-4971509 None:intergenic 55.0%
TGGGCTGCTCAAATGGCTGT+AGG - chr1.2:4969482-4969501 MS.gene00494:CDS 55.0%
TGTACCTCGGGTGTGCTTCT+TGG + chr1.2:4967231-4967250 None:intergenic 55.0%
! CTATCCAAGAAGCACACCCG+AGG - chr1.2:4967224-4967243 MS.gene00494:intron 55.0%
! GGACTGAGAATTGGTCTGGC+TGG - chr1.2:4969859-4969878 MS.gene00494:intron 55.0%
!! CACACCCCTTTTGGTTGCTC+TGG - chr1.2:4971481-4971500 MS.gene00494:intron 55.0%
ACAACCTTTGACGCGCCGAG+TGG - chr1.2:4972000-4972019 MS.gene00494:intron 60.0%
GAATGGGGAGGTGACCCTAC+TGG - chr1.2:4972354-4972373 MS.gene00494:CDS 60.0%
TCGTCGTCACTGGAGTAGGC+AGG + chr1.2:4970950-4970969 None:intergenic 60.0%
GCCACTGGATCGCTGCCACT+CGG + chr1.2:4972018-4972037 None:intergenic 65.0%
GCCGAGTGGCAGCGATCCAG+TGG - chr1.2:4972014-4972033 MS.gene00494:intron 70.0%
GCTGCCACTCGGCGCGTCAA+AGG + chr1.2:4972007-4972026 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 4967102 4972401 4967102 ID=MS.gene00494
chr1.2 mRNA 4967102 4972401 4967102 ID=MS.gene00494.t1;Parent=MS.gene00494
chr1.2 exon 4972258 4972401 4972258 ID=MS.gene00494.t1.exon1;Parent=MS.gene00494.t1
chr1.2 CDS 4972258 4972401 4972258 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4970816 4970911 4970816 ID=MS.gene00494.t1.exon2;Parent=MS.gene00494.t1
chr1.2 CDS 4970816 4970911 4970816 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4970615 4970727 4970615 ID=MS.gene00494.t1.exon3;Parent=MS.gene00494.t1
chr1.2 CDS 4970615 4970727 4970615 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4970454 4970520 4970454 ID=MS.gene00494.t1.exon4;Parent=MS.gene00494.t1
chr1.2 CDS 4970454 4970520 4970454 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4970243 4970335 4970243 ID=MS.gene00494.t1.exon5;Parent=MS.gene00494.t1
chr1.2 CDS 4970243 4970335 4970243 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4969941 4970084 4969941 ID=MS.gene00494.t1.exon6;Parent=MS.gene00494.t1
chr1.2 CDS 4969941 4970084 4969941 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4969623 4969711 4969623 ID=MS.gene00494.t1.exon7;Parent=MS.gene00494.t1
chr1.2 CDS 4969623 4969711 4969623 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4969415 4969520 4969415 ID=MS.gene00494.t1.exon8;Parent=MS.gene00494.t1
chr1.2 CDS 4969415 4969520 4969415 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4969195 4969282 4969195 ID=MS.gene00494.t1.exon9;Parent=MS.gene00494.t1
chr1.2 CDS 4969195 4969282 4969195 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4968992 4969113 4968992 ID=MS.gene00494.t1.exon10;Parent=MS.gene00494.t1
chr1.2 CDS 4968992 4969113 4968992 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4968733 4968897 4968733 ID=MS.gene00494.t1.exon11;Parent=MS.gene00494.t1
chr1.2 CDS 4968733 4968897 4968733 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4968456 4968631 4968456 ID=MS.gene00494.t1.exon12;Parent=MS.gene00494.t1
chr1.2 CDS 4968456 4968631 4968456 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4968244 4968353 4968244 ID=MS.gene00494.t1.exon13;Parent=MS.gene00494.t1
chr1.2 CDS 4968244 4968353 4968244 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4968045 4968154 4968045 ID=MS.gene00494.t1.exon14;Parent=MS.gene00494.t1
chr1.2 CDS 4968045 4968154 4968045 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4967811 4967921 4967811 ID=MS.gene00494.t1.exon15;Parent=MS.gene00494.t1
chr1.2 CDS 4967811 4967921 4967811 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4967598 4967708 4967598 ID=MS.gene00494.t1.exon16;Parent=MS.gene00494.t1
chr1.2 CDS 4967598 4967708 4967598 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4967298 4967503 4967298 ID=MS.gene00494.t1.exon17;Parent=MS.gene00494.t1
chr1.2 CDS 4967298 4967503 4967298 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
chr1.2 exon 4967102 4967207 4967102 ID=MS.gene00494.t1.exon18;Parent=MS.gene00494.t1
chr1.2 CDS 4967102 4967207 4967102 ID=cds.MS.gene00494.t1;Parent=MS.gene00494.t1
Gene Sequence

>MS.gene00494

ATGCTGGGGTTGATTTTATTATTGTCTTTGTGGGTTTGTGGTGTTACTGCTTCAGTGAGTTATGATCACAAAGCCCTTGTGATTGATGGACAAAGAAGAATTTTGATATCTGGCTCCATCCACTATCCAAGAAGCACACCCGAGGTACACTCATTCCACTCCAACCTCCATCCAACATGTGTACAACATTAGTTTTTGTTTTTTTGTTCTCCAAATTATTGCTTTCCTTTCTCTTTTATTTATTCATTTTACAGATAGATCCATGCATGAACCAAAATTATGTATATGTTTGTTGTTACTTAATCGTGGTCCCCTTTTTTCACCATTTTGTGGGTTTGGTCATCCTATTTTAAAATCTAAAATTTTTGGTCCCTCCATAATATTTTTGAATTAAAAAATTAGTAATGTAATATGTTTTAAATGACATTTTACATGTTCTAATGATAAGAAAAGATCAATATCAATAAAATTGTAAAAAAGCTTCTCCTTAAAAAGTTCATTTAAATTAAGTCATATCATCATATTTTAGATAAAATATTTTATGGAATAATCAAAACAGTCAAATTTTAAAATAAGGAGATTACTGACTAAATGAGATGTCTGGGGTTCGAACCCGACCCCTGCATATATTATGCAATGAACACCTTTCTTTATTTTCTATTATATGAAAATAAATATTATCTTCTTGTCTTATGTATTTTGATATCTATATTTTTTTTTTATTATAAGTTGGAATGTAGTAAACTAGGAAAAATTTTGCCAGTGTATTTTTGTTATATATTACACCCTCCGGTTACTAATATAAGTAAAAATTCATTTTTAAAGTTCATTCAATAAATGATGTATGTGGTCTATAATATCGACCACATACATCAATTATTAAATGAACCTTAAGAACAAATTTTTGCTTATATTAATGATCAGAGGGTGTAATTACCAACGGGAACCAACATGCACATTTTTTATTTTATTTTGATGAATAAAACTTTTTATTTTGACGATAAAACTAATAATTGTAAAATTTTATCCAATTATTTAAAATGTTAAGTTATTTGATTGGTAAGGAAGGATAATATGGTAAAAAAAGAGTTTAAACCATATTCGTAAAATTGGAAGGAAAAATATTGCACCACAAGTCAATATCTTTTTATATAAAAGCATAGATATTTGAAAAATTTGTTAATAAAAAGTTTATATAAAAGATAAAACTAAAAGCAAAAGGCACGCAACTTTTTTTTGTCTATTTTTTTAATGTAGTATAGATACTTATTTGTGGTTTTGCATATATTTTTATACAATTTAATACTGTTTATATAAAATGTATATTAACATATAGTAGTATAGTACCTTAATTTTTTTGAGAAAAAAAAAACTGTATCCCATACCTGTATCTATACAACATAGATTTTTCTTATGCAATGTCTTGGATTTGAGTCTTGCGTACATAAGTTTTCTCGGTAAAAATTCATCAAATATGTTTCTTAATGCAGATGTGGCCAGACTTATTTCAAAAGGCTAAAGATGGAGGCCTTGATGTTATTCAAACCTATGTATTTTGGAATGGACATGAGCCTTCTCCTGGAAATGTAACGAAGATATTTATTTCTTTTAATAGTGCTTCAATTTAGTTGTTTTTCACTCATTGAAGTTTCATATAATGTTGAAAAATTTCAGTATTACTTCGAAGATAGATTTGACTTAGTAAAGTTTGTCAAGCTAGCACAACAAGCTGGTCTTTATGTTCACTTGCGTATTGGTCCCTACGTTTGTGCTGAATGGAATTATGGGTAATGATTTTAATGATGTAGTTCATGAGAATAAAAAAATAAAATAAAATAAAATAAAATAGCACTCTAAAATGAAATAATTATTTATGTGCAGAGGATTTCCTGTTTGGCTCAAGTATGTTCCAGGGATGGCTTTCAGAACAGACAATGAGCCATTTAAGGTTGGAGTTTCAATTTTTAGCATCATTATTCTAATGATTTAATTATGTATAGTTGATTATTTTTTTATTAATTAATTTTTAATTAATCCAAACTTTTGGCATGATGTATATATGTTAGGCTGCTATGCAAAAATTCACGACCAAAATTGTGAACATGATGAAAGCAGAGAGTTTGTTTCAAACTCAGGGTGGTCCAATAATTATGTCTCAGGTAAATAAAGAAATGACATTAACATTTTTTTTTATTATAAAGTTTTTGTTGGAGCCAATTACAATAAGAAGCGTTGCTTTCCCTAAAAAAAAAAAAAAATAAGAAGCGATGCTCAATTTAATCTAATACTGAAATTGGATATTCATTTGAATTGATAGATCGAGAATGAGTATGGACCTGTGGAATGGGAAATTGGTGCTCCTGGAAAGGCTTACACAAAATGGGCTGCTCAAATGGCTGTAGGTCTAGATACTGGTGTACCTTGGGACATGTGCAAGCAAGAAGACGCACCTGATCCCGTTGTAAGTTTACCTTAGCAGTATCAGCGTGTTCGTATCTGTGTCGTGTCAATCATATCAGGCATATTTGTCAGAGTCATTGCTTTATAGATGATGAGTTGTATGTTAATGTATGTGTTTAGTGTTAGAGAAGAGGTACAAATTTGAAGGATAAAGGATTAAAAAACTAAATTAATTTATTCTTACTTTCATTTTTCTCTGTTTGATATATATTTACCGAACTATGTTGTAGATTGACACTTGCAATGGATATTACTGTGAAAACTTCACTCCCAACGAGAACTTTAAACCCAAAATGTGGACTGAGAATTGGTCTGGCTGGTAAGTCATACTCATTCAAATGCTACCATTAATTTAAAGCTATAAATATTTCATTTGGGAATTGGGATCATATGTTTAATTTTTATCTTACCTATTCTATAGGTACACTGATTTCGGTGGTGCTCTATCTCATAGACCAACTGAAGACTTGGCATACTCAGTTGCTAGATTCATACAAAATCGTGGCTCCTTTGTTAACTACTATATGGTATATGAATATGATGGCATAATTACATTTGATTAATCCTGTGTGAATACTTCTAAGTTCTCACTAATCACTACACAGTTATATGATCTAGAAACTTTGATTTTAGTCTCATCTCTTTATATTTGATTGTAGTATCATGGAGGAACTAATTTTGGTCGAACATCTAGTGGCCTTTTTATTGCCACAAGCTATGATTATGATGCTCCTATTGATGAATATGGTATGCAATAAGGTTTAAATTGTTTCATGGTTTGAATTATAACAACAATTAGAAATATTTTAACGCCTTTCAAAATATTAGGACTTCCAAATGAACCAAAATGGAGCCATCTGAAAAATTTACATAAAGCAATAAAACAATGTGAGCCAGCTTTGATTTCTGTGGATCCTACAGTCACATGGCTTGGAAATAAAAACCTTGAGGTAAAGTCTATGACTCAGTTCATGATAAGATTATGGTCCAAAATTGTTACTTTATTGAAGCCTAGTTTGATTTTTTTTGTTAATGTAATCTTAGGCGCATGTGTACTACGTAAGTACCAGTGTCTGTGCTGCATTCCTTGCAAACTACGACACAAAATCTGCGGCAACGGTTACATTTGGAAATGGCAAATATGATCTACCACCTTGGTCTGTCAGCATTCTTCCTGATTGCAAAACTGTAGTTTTCAACACGGCAACGGTAACACAAGATAATTGAACATGTTAAATAAGTTTTGTATTTACCATGTTAGAAGTTTTTTGAAGTTTGAACATTTATAAAATTTTACTAATTTCATGCAGGTTAATGGACATAGCTTCCATAAAAGGATGACTCCCGTGGATACTACATTTGATTGGCAGTCATACAGTGAAGAGCCTGCCTACTCCAGTGACGACGATTCCATCATAGCAAATGCACTTTGGGAGCAAATCAACGTTACTCGCGATTCTTCAGATTATCTGTGGTATTTGACAGAGTAAGAATTTTTTTAACTTTCCTAACTTCTTAAAACACATTAAAAATTTGGAATTTTAATCATTGAGTCTTGATACTAACTCTATCATTTATCCATTTTCAGTGTAAACATTAGTCCTAATGAAAGTTTTGTAAAGAATGGTCAATCTCCTACTCTTACCATAAATTCAGCAGGTCATGTTCTACATGTTTTTGTTAATGGTCAACTTTCAGGTCAGTATGCCTTTTCTTCTTAGAAATTCCTTCATGATAAATTCCAATTTATATATTCTAAATTAACATTAAGTTATATATGAATGTAGGAACTGTGTATGGAGGATTGGATAATCCTAAATTAACATTTAGTGAAAGTGTTAACCTAAAGGTCGGCAATAACAAGATTTCTTTACTTAGTGTTGCTGTGGGTCTTCCGGTTAGTATTATCTTGTTCGATGCACACCCCTTTTGGTTGCTCTGGTCGCACATTTTAGGCGACATTTTTCAAATTTATGATAAGTATTATATTAATTTTTTTCTACTTTCAAATTAATACCAGAATGTTGGTCTGCACTTTGAAACATGGAATGTTGGGGTGTTAGGCCCAGTAACATTGAAGGGTCTAGATGAGGGGACAAGAGACTTGTCTTGGCAGAAATGGTCTTACAAGGTTTGATATATCGTATATTCATTTATAGAGATTAAAAACATATTTAAGTCAAACTTTTAATATTATGTACATTGTTGAGACAAATTTTATGTTGTTGGATAGGTTGGACTAAAGGGTGAATCTTTGAGCCTTCATACCATAACTGGAAGTTCCTCCATTGATTGGACACAAGGATCATCATTGGTTAAAAAACAACCTTTGACATGGTACAAGGTAAGAATATTTGTACTAAAAATGCTACACCTTTGCCAATGTTACATATGACCATCTGCATTTTCAATAAATCTGAGTTCTTCAATCTTGTTAGACAACCTTTGACGCGCCGAGTGGCAGCGATCCAGTGGCACTAGATATGAGTAGCATGGGAAAGGGTGAAATATGGATAAACGACCAAAGCATTGGTCGTCATTGGCCTGCATATATAGCACATGGTAATTGTGATGAATGTAATTACGCTGGAACTTTTACTAATCCAAAATGCAGGACAAATTGTGGAGAACCAACACAGAAATGGTAAGATTTCATATAACGAGGTACTTTACAATAATGATGCAAGTAATTTGAGATTATGAGAGTAATTTTTTTTTTTAATCTTTTGGATAGGTATCATATTCCTCGGTCATGGTTGAGTCCAAGTGGGAACGTCTTGGTTGTGCTTGAAGAATGGGGAGGTGACCCTACTGGAATTTCATTGGTGAAAAGAACATGA
Protein sequence

>MS.gene00494.t1

MLGLILLLSLWVCGVTASVSYDHKALVIDGQRRILISGSIHYPRSTPEMWPDLFQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRFDLVKFVKLAQQAGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGMAFRTDNEPFKAAMQKFTTKIVNMMKAESLFQTQGGPIIMSQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWDMCKQEDAPDPVIDTCNGYYCENFTPNENFKPKMWTENWSGWYTDFGGALSHRPTEDLAYSVARFIQNRGSFVNYYMYHGGTNFGRTSSGLFIATSYDYDAPIDEYGLPNEPKWSHLKNLHKAIKQCEPALISVDPTVTWLGNKNLEAHVYYVSTSVCAAFLANYDTKSAATVTFGNGKYDLPPWSVSILPDCKTVVFNTATVNGHSFHKRMTPVDTTFDWQSYSEEPAYSSDDDSIIANALWEQINVTRDSSDYLWYLTDVNISPNESFVKNGQSPTLTINSAGHVLHVFVNGQLSGTVYGGLDNPKLTFSESVNLKVGNNKISLLSVAVGLPNVGLHFETWNVGVLGPVTLKGLDEGTRDLSWQKWSYKVGLKGESLSLHTITGSSSIDWTQGSSLVKKQPLTWYKTTFDAPSGSDPVALDMSSMGKGEIWINDQSIGRHWPAYIAHGNCDECNYAGTFTNPKCRTNCGEPTQKWYHIPRSWLSPSGNVLVVLEEWGGDPTGISLVKRT