Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66451.t1 | XP_003589080.2 | 97.8 | 718 | 16 | 0 | 1 | 718 | 13 | 730 | 0.00E+00 | 1509.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66451.t1 | P48981 | 73.4 | 717 | 189 | 2 | 1 | 717 | 8 | 722 | 0.0e+00 | 1171.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66451.t1 | G7ICD0 | 97.8 | 718 | 16 | 0 | 1 | 718 | 13 | 730 | 0.0e+00 | 1509.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058848 | MS.gene66451 | 0.851788 | 7.07E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85387 | MS.gene66451 | PPI |
| MS.gene66451 | MS.gene00494 | PPI |
| MS.gene66451 | MS.gene025097 | PPI |
| MS.gene66451 | MS.gene24470 | PPI |
| MS.gene66451 | MS.gene026070 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66451.t1 | MTR_1g018200 | 97.772 | 718 | 16 | 0 | 1 | 718 | 13 | 730 | 0.0 | 1469 |
| MS.gene66451.t1 | MTR_2g039120 | 80.532 | 714 | 138 | 1 | 5 | 718 | 14 | 726 | 0.0 | 1229 |
| MS.gene66451.t1 | MTR_2g039120 | 79.706 | 680 | 137 | 1 | 5 | 684 | 14 | 692 | 0.0 | 1161 |
| MS.gene66451.t1 | MTR_8g016230 | 68.985 | 719 | 219 | 3 | 1 | 717 | 7 | 723 | 0.0 | 1076 |
| MS.gene66451.t1 | MTR_2g100110 | 70.904 | 708 | 202 | 3 | 12 | 717 | 21 | 726 | 0.0 | 1059 |
| MS.gene66451.t1 | MTR_2g039120 | 79.248 | 612 | 126 | 1 | 5 | 616 | 14 | 624 | 0.0 | 1033 |
| MS.gene66451.t1 | MTR_2g039120 | 79.478 | 575 | 117 | 1 | 5 | 579 | 14 | 587 | 0.0 | 973 |
| MS.gene66451.t1 | MTR_3g112370 | 62.917 | 720 | 262 | 4 | 2 | 718 | 9 | 726 | 0.0 | 959 |
| MS.gene66451.t1 | MTR_1g023120 | 63.262 | 705 | 254 | 5 | 15 | 717 | 25 | 726 | 0.0 | 957 |
| MS.gene66451.t1 | MTR_5g021190 | 62.500 | 720 | 264 | 6 | 1 | 718 | 9 | 724 | 0.0 | 952 |
| MS.gene66451.t1 | MTR_1g023120 | 62.742 | 671 | 245 | 5 | 49 | 717 | 1 | 668 | 0.0 | 901 |
| MS.gene66451.t1 | MTR_2g094020 | 59.478 | 728 | 270 | 9 | 5 | 717 | 6 | 723 | 0.0 | 879 |
| MS.gene66451.t1 | MTR_2g100110 | 72.281 | 570 | 154 | 3 | 12 | 579 | 21 | 588 | 0.0 | 877 |
| MS.gene66451.t1 | MTR_2g094060 | 59.254 | 724 | 274 | 8 | 5 | 717 | 6 | 719 | 0.0 | 867 |
| MS.gene66451.t1 | MTR_2g094060 | 59.254 | 724 | 274 | 8 | 5 | 717 | 6 | 719 | 0.0 | 867 |
| MS.gene66451.t1 | MTR_4g059680 | 56.868 | 728 | 285 | 9 | 5 | 714 | 6 | 722 | 0.0 | 827 |
| MS.gene66451.t1 | MTR_2g094060 | 59.361 | 689 | 259 | 8 | 5 | 682 | 6 | 684 | 0.0 | 823 |
| MS.gene66451.t1 | MTR_3g096900 | 54.772 | 723 | 313 | 6 | 6 | 717 | 14 | 733 | 0.0 | 783 |
| MS.gene66451.t1 | MTR_8g085210 | 50.931 | 752 | 320 | 10 | 5 | 714 | 30 | 774 | 0.0 | 758 |
| MS.gene66451.t1 | MTR_3g096900 | 54.203 | 690 | 302 | 6 | 6 | 684 | 14 | 700 | 0.0 | 734 |
| MS.gene66451.t1 | MTR_3g088520 | 50.628 | 717 | 305 | 16 | 6 | 714 | 12 | 687 | 0.0 | 679 |
| MS.gene66451.t1 | MTR_3g096910 | 50.554 | 722 | 316 | 12 | 1 | 714 | 10 | 698 | 0.0 | 676 |
| MS.gene66451.t1 | MTR_5g024080 | 48.324 | 716 | 352 | 11 | 10 | 714 | 2 | 710 | 0.0 | 674 |
| MS.gene66451.t1 | MTR_5g025830 | 49.083 | 709 | 345 | 10 | 19 | 718 | 28 | 729 | 0.0 | 674 |
| MS.gene66451.t1 | MTR_2g042610 | 49.371 | 715 | 339 | 13 | 16 | 714 | 24 | 731 | 0.0 | 661 |
| MS.gene66451.t1 | MTR_3g096900 | 54.383 | 616 | 270 | 4 | 6 | 613 | 14 | 626 | 0.0 | 655 |
| MS.gene66451.t1 | MTR_4g073290 | 46.695 | 711 | 346 | 11 | 12 | 715 | 19 | 703 | 0.0 | 650 |
| MS.gene66451.t1 | MTR_3g005570 | 46.403 | 709 | 354 | 12 | 1 | 692 | 5 | 704 | 0.0 | 639 |
| MS.gene66451.t1 | MTR_3g088520 | 50.223 | 673 | 287 | 15 | 49 | 714 | 1 | 632 | 0.0 | 630 |
| MS.gene66451.t1 | MTR_3g117840 | 45.710 | 711 | 347 | 14 | 12 | 715 | 29 | 707 | 0.0 | 630 |
| MS.gene66451.t1 | MTR_3g096910 | 47.160 | 581 | 265 | 12 | 143 | 714 | 1 | 548 | 1.54e-166 | 491 |
| MS.gene66451.t1 | MTR_4g126330 | 47.932 | 411 | 117 | 4 | 274 | 684 | 131 | 444 | 2.36e-117 | 360 |
| MS.gene66451.t1 | MTR_4g126330 | 85.870 | 92 | 13 | 0 | 74 | 165 | 25 | 116 | 3.96e-49 | 179 |
| MS.gene66451.t1 | MTR_5g022590 | 42.154 | 325 | 138 | 9 | 38 | 355 | 11 | 292 | 7.10e-75 | 248 |
| MS.gene66451.t1 | MTR_3g005610 | 31.615 | 291 | 161 | 8 | 422 | 706 | 22 | 280 | 4.99e-34 | 132 |
| MS.gene66451.t1 | MTR_2g100000 | 32.622 | 328 | 184 | 9 | 29 | 327 | 64 | 383 | 6.56e-33 | 135 |
| MS.gene66451.t1 | MTR_2g059440 | 30.970 | 268 | 149 | 7 | 443 | 706 | 44 | 279 | 1.05e-28 | 117 |
| MS.gene66451.t1 | MTR_2g059430 | 27.547 | 265 | 128 | 5 | 443 | 706 | 10 | 211 | 1.48e-21 | 94.7 |
| MS.gene66451.t1 | MTR_6g007470 | 37.671 | 146 | 42 | 3 | 140 | 285 | 2 | 98 | 4.90e-19 | 87.0 |
| MS.gene66451.t1 | MTR_8g076800 | 68.627 | 51 | 16 | 0 | 140 | 190 | 9 | 59 | 9.66e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66451.t1 | AT4G26140 | 70.417 | 720 | 206 | 6 | 1 | 718 | 12 | 726 | 0.0 | 1094 |
| MS.gene66451.t1 | AT4G26140 | 68.188 | 745 | 205 | 7 | 1 | 718 | 12 | 751 | 0.0 | 1081 |
| MS.gene66451.t1 | AT5G56870 | 71.309 | 718 | 201 | 5 | 1 | 718 | 12 | 724 | 0.0 | 1066 |
| MS.gene66451.t1 | AT3G52840 | 68.627 | 714 | 221 | 3 | 5 | 718 | 69 | 779 | 0.0 | 1064 |
| MS.gene66451.t1 | AT3G13750 | 68.951 | 715 | 218 | 3 | 5 | 717 | 20 | 732 | 0.0 | 1062 |
| MS.gene66451.t1 | AT3G52840 | 68.627 | 714 | 221 | 3 | 5 | 718 | 15 | 725 | 0.0 | 1061 |
| MS.gene66451.t1 | AT4G26140 | 67.932 | 711 | 196 | 7 | 1 | 684 | 12 | 717 | 0.0 | 1023 |
| MS.gene66451.t1 | AT4G36360 | 62.901 | 717 | 258 | 5 | 4 | 718 | 22 | 732 | 0.0 | 967 |
| MS.gene66451.t1 | AT4G36360 | 62.901 | 717 | 258 | 5 | 4 | 718 | 22 | 732 | 0.0 | 967 |
| MS.gene66451.t1 | AT1G45130 | 62.691 | 721 | 261 | 5 | 4 | 718 | 12 | 730 | 0.0 | 959 |
| MS.gene66451.t1 | AT4G26140 | 71.220 | 615 | 172 | 5 | 1 | 615 | 12 | 621 | 0.0 | 934 |
| MS.gene66451.t1 | AT4G26140 | 71.220 | 615 | 172 | 5 | 1 | 615 | 12 | 621 | 0.0 | 934 |
| MS.gene66451.t1 | AT4G26140 | 70.989 | 617 | 172 | 6 | 1 | 615 | 12 | 623 | 0.0 | 929 |
| MS.gene66451.t1 | AT2G28470 | 59.777 | 716 | 269 | 8 | 14 | 717 | 27 | 735 | 0.0 | 880 |
| MS.gene66451.t1 | AT2G28470 | 60.028 | 713 | 266 | 8 | 17 | 717 | 24 | 729 | 0.0 | 880 |
| MS.gene66451.t1 | AT2G28470 | 59.777 | 716 | 269 | 8 | 14 | 717 | 27 | 735 | 0.0 | 880 |
| MS.gene66451.t1 | AT2G28470 | 60.028 | 713 | 266 | 8 | 17 | 717 | 24 | 729 | 0.0 | 880 |
| MS.gene66451.t1 | AT1G45130 | 61.778 | 641 | 241 | 4 | 80 | 718 | 13 | 651 | 0.0 | 847 |
| MS.gene66451.t1 | AT2G28470 | 59.531 | 682 | 257 | 8 | 13 | 682 | 26 | 700 | 0.0 | 830 |
| MS.gene66451.t1 | AT4G26140 | 71.823 | 543 | 146 | 6 | 1 | 541 | 12 | 549 | 0.0 | 826 |
| MS.gene66451.t1 | AT4G26140 | 68.838 | 568 | 145 | 7 | 1 | 541 | 12 | 574 | 0.0 | 813 |
| MS.gene66451.t1 | AT4G26140 | 68.838 | 568 | 145 | 7 | 1 | 541 | 12 | 574 | 0.0 | 813 |
| MS.gene66451.t1 | AT5G63810 | 54.608 | 727 | 316 | 6 | 1 | 717 | 14 | 736 | 0.0 | 796 |
| MS.gene66451.t1 | AT2G32810 | 52.209 | 747 | 319 | 10 | 1 | 714 | 14 | 755 | 0.0 | 771 |
| MS.gene66451.t1 | AT2G32810 | 52.209 | 747 | 319 | 10 | 1 | 714 | 14 | 755 | 0.0 | 770 |
| MS.gene66451.t1 | AT5G20710 | 48.686 | 723 | 355 | 10 | 2 | 714 | 12 | 728 | 0.0 | 685 |
| MS.gene66451.t1 | AT5G63800 | 49.311 | 726 | 322 | 15 | 2 | 714 | 10 | 702 | 0.0 | 664 |
| MS.gene66451.t1 | AT1G77410 | 48.061 | 722 | 329 | 15 | 2 | 714 | 8 | 692 | 0.0 | 655 |
| MS.gene66451.t1 | AT1G77410 | 47.730 | 727 | 329 | 16 | 2 | 714 | 8 | 697 | 0.0 | 649 |
| MS.gene66451.t1 | AT1G31740 | 45.753 | 730 | 332 | 13 | 1 | 714 | 1 | 682 | 0.0 | 634 |
| MS.gene66451.t1 | AT2G16730 | 45.022 | 693 | 348 | 9 | 18 | 704 | 43 | 708 | 0.0 | 616 |
| MS.gene66451.t1 | AT4G35010 | 44.380 | 694 | 351 | 12 | 18 | 704 | 40 | 705 | 0.0 | 595 |
| MS.gene66451.t1 | AT4G38590 | 44.078 | 667 | 337 | 11 | 49 | 707 | 1 | 639 | 0.0 | 561 |
| MS.gene66451.t1 | AT4G38590 | 41.370 | 730 | 371 | 14 | 1 | 707 | 8 | 703 | 0.0 | 552 |
| MS.gene66451.t1 | AT1G77410 | 46.777 | 605 | 276 | 15 | 119 | 714 | 19 | 586 | 5.92e-174 | 515 |
| MS.gene66451.t1 | AT1G77410 | 46.777 | 605 | 276 | 15 | 119 | 714 | 19 | 586 | 5.92e-174 | 515 |
| MS.gene66451.t1 | AT5G20710 | 43.371 | 528 | 284 | 9 | 197 | 714 | 1 | 523 | 1.27e-143 | 434 |
| MS.gene66451.t1 | AT2G04060 | 34.865 | 370 | 163 | 10 | 284 | 651 | 23 | 316 | 8.31e-51 | 184 |
| MS.gene66451.t1 | AT1G72990 | 36.061 | 330 | 174 | 9 | 29 | 329 | 18 | 339 | 1.07e-44 | 170 |
| MS.gene66451.t1 | AT1G72990 | 36.061 | 330 | 174 | 9 | 29 | 329 | 73 | 394 | 2.58e-44 | 170 |
| MS.gene66451.t1 | AT1G72990 | 36.061 | 330 | 174 | 9 | 29 | 329 | 73 | 394 | 2.58e-44 | 170 |
| MS.gene66451.t1 | AT1G72990 | 34.483 | 319 | 172 | 9 | 40 | 329 | 22 | 332 | 1.48e-38 | 152 |
| MS.gene66451.t1 | AT2G04062 | 39.888 | 178 | 86 | 2 | 13 | 190 | 1 | 157 | 1.60e-33 | 126 |
Find 182 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTCAAACCTATGTATTT+TGG | 0.134516 | 1.4:-4866347 | MS.gene66451:CDS |
| CCACAATTTGTCCTGCATTT+TGG | 0.151033 | 1.4:+4862829 | None:intergenic |
| TTTGTTAATGGTCAACTTTC+AGG | 0.158124 | 1.4:-4863756 | MS.gene66451:intron |
| CCAATTCTCAGTCCACATTT+TGG | 0.160554 | 1.4:+4865144 | None:intergenic |
| AACATGACCTGCTGAATTTA+TGG | 0.167665 | 1.4:+4863788 | None:intergenic |
| AACAGACAATGAGCCATTTA+AGG | 0.176309 | 1.4:-4865967 | MS.gene66451:intron |
| TTTACCTGAGACATAATTAT+TGG | 0.179827 | 1.4:+4865752 | None:intergenic |
| ACTAATTTCATGCAGGTTAA+TGG | 0.191236 | 1.4:-4864137 | MS.gene66451:intron |
| CTTTCACTAAATGTTAATTT+AGG | 0.219363 | 1.4:+4863619 | None:intergenic |
| TTTCATCATGTTCACAATTT+TGG | 0.227558 | 1.4:+4865805 | None:intergenic |
| CTGGAAAGGCTTACACAAAA+TGG | 0.230100 | 1.4:-4865532 | MS.gene66451:CDS |
| GTTTGTGCTGAATGGAATTA+TGG | 0.235478 | 1.4:-4866119 | MS.gene66451:CDS |
| ATTGAAACTCCAACCTTAAA+TGG | 0.236195 | 1.4:+4865954 | None:intergenic |
| TATCATGGAGGAACTAATTT+TGG | 0.268539 | 1.4:-4864773 | MS.gene66451:CDS |
| AATATCTTCGTTACATTTCC+AGG | 0.270788 | 1.4:+4866306 | None:intergenic |
| TTGAGCCTTCATACCATAAC+TGG | 0.288620 | 1.4:-4863178 | MS.gene66451:CDS |
| TCTTGTTATTGCCGACCTTT+AGG | 0.289024 | 1.4:+4863590 | None:intergenic |
| TCTAGACCCTTCAATGTTAC+TGG | 0.308225 | 1.4:+4863367 | None:intergenic |
| CATAGCTTGTGGCAATAAAA+AGG | 0.308874 | 1.4:+4864735 | None:intergenic |
| TTCTATAGGTACACTGATTT+CGG | 0.310712 | 1.4:-4865019 | MS.gene66451:intron |
| CTCCTTTGTTAACTACTATA+TGG | 0.312217 | 1.4:-4864927 | MS.gene66451:intron |
| CACAAAATGGGCTGCTCAAA+TGG | 0.319547 | 1.4:-4865519 | MS.gene66451:CDS |
| ATGGACATAGCTTCCATAAA+AGG | 0.323182 | 1.4:-4864118 | MS.gene66451:CDS |
| GTTTGGCTCAAGTATGTTCC+AGG | 0.324279 | 1.4:-4866002 | MS.gene66451:CDS |
| TGTACCTCGGGTGTGCTTCT+TGG | 0.329719 | 1.4:+4867756 | None:intergenic |
| TGTGCAGAGGATTTCCTGTT+TGG | 0.333950 | 1.4:-4866019 | MS.gene66451:intron |
| GCATGGGAAAGGGTGAAATA+TGG | 0.334337 | 1.4:-4862942 | MS.gene66451:CDS |
| CTTTATGTTCACTTGCGTAT+TGG | 0.343254 | 1.4:-4866149 | MS.gene66451:CDS |
| TAGTGTTGCTGTGGGTCTTC+CGG | 0.356885 | 1.4:-4863557 | MS.gene66451:intron |
| GACTTCCAAATGAACCAAAA+TGG | 0.361446 | 1.4:-4864604 | MS.gene66451:CDS |
| CATCATAGCAAATGCACTTT+GGG | 0.376087 | 1.4:-4864021 | MS.gene66451:CDS |
| TGCATACCATATTCATCAAT+AGG | 0.379546 | 1.4:+4864701 | None:intergenic |
| CACAAAGCCCTTGTGATTGA+TGG | 0.381962 | 1.4:-4867816 | MS.gene66451:CDS |
| CTGGAAGTTCCTCCATTGAT+TGG | 0.382186 | 1.4:-4863159 | MS.gene66451:CDS |
| TTCTTTACAAAACTTTCATT+AGG | 0.386816 | 1.4:+4863831 | None:intergenic |
| TGATAGATTGAGAATGAGTA+TGG | 0.387003 | 1.4:-4865581 | MS.gene66451:intron |
| GGACCTGTGGAATGGGAAAT+TGG | 0.390507 | 1.4:-4865560 | MS.gene66451:CDS |
| GATGCTCCTATTGATGAATA+TGG | 0.390606 | 1.4:-4864707 | MS.gene66451:intron |
| CCAAAGTGCATTTGCTATGA+TGG | 0.390990 | 1.4:+4864022 | None:intergenic |
| ACATGGAATGTTGGGGTGTT+AGG | 0.391351 | 1.4:-4863391 | MS.gene66451:CDS |
| TCTGCGGCAACGGTTACATT+TGG | 0.396362 | 1.4:-4864325 | MS.gene66451:CDS |
| CCAAAATGTGGACTGAGAAT+TGG | 0.399232 | 1.4:-4865144 | MS.gene66451:CDS |
| TATATTTGATTGTAGTATCA+TGG | 0.404132 | 1.4:-4864788 | MS.gene66451:intron |
| AATGGACATGAGCCTTCTCC+TGG | 0.408664 | 1.4:-4866324 | MS.gene66451:CDS |
| GAGACTTGTCTTGGCAGAAA+TGG | 0.417613 | 1.4:-4863333 | MS.gene66451:CDS |
| CCATCATAGCAAATGCACTT+TGG | 0.421070 | 1.4:-4864022 | MS.gene66451:CDS |
| GGAACATACTTGAGCCAAAC+AGG | 0.423416 | 1.4:+4866005 | None:intergenic |
| GTCCCTACGTTTGTGCTGAA+TGG | 0.427816 | 1.4:-4866127 | MS.gene66451:CDS |
| TCTTTACTTAGTGTTGCTGT+GGG | 0.428806 | 1.4:-4863565 | MS.gene66451:CDS |
| GCAACGGTTACATTTGGAAA+TGG | 0.429102 | 1.4:-4864319 | MS.gene66451:CDS |
| ACCAAAGCATTGGTCGTCAT+TGG | 0.431882 | 1.4:-4862912 | MS.gene66451:CDS |
| GCCAATGACGACCAATGCTT+TGG | 0.432093 | 1.4:+4862911 | None:intergenic |
| TTCTTTACTTAGTGTTGCTG+TGG | 0.433115 | 1.4:-4863566 | MS.gene66451:CDS |
| AGAGAGTTTGTTTCAAACTC+AGG | 0.436146 | 1.4:-4865780 | MS.gene66451:CDS |
| TTATTGTCTTTGTGGGTTTG+TGG | 0.439850 | 1.4:-4867864 | MS.gene66451:CDS |
| TGACCCTACTGGAATTTCAT+TGG | 0.446479 | 1.4:-4862630 | MS.gene66451:CDS |
| CCAATCAAATGTAGTATCCA+TGG | 0.449861 | 1.4:+4864088 | None:intergenic |
| CTTGGTTGTGCTTGAAGAAT+GGG | 0.453865 | 1.4:-4862657 | MS.gene66451:CDS |
| TTGGACACAAGGATCATCAT+TGG | 0.454214 | 1.4:-4863140 | MS.gene66451:CDS |
| TTCGTTACATTTCCAGGAGA+AGG | 0.456508 | 1.4:+4866312 | None:intergenic |
| GTTGGATAGGTTGGACTAAA+GGG | 0.457143 | 1.4:-4863208 | MS.gene66451:intron |
| CCATGGATACTACATTTGAT+TGG | 0.459807 | 1.4:-4864088 | MS.gene66451:CDS |
| TGGAAAGGCTTACACAAAAT+GGG | 0.465526 | 1.4:-4865531 | MS.gene66451:CDS |
| GTGGAGAACCAACACAGAAA+TGG | 0.465677 | 1.4:-4862810 | MS.gene66451:intron |
| TAGTGAAAGTGTTAACCTAA+AGG | 0.466295 | 1.4:-4863605 | MS.gene66451:CDS |
| GGTAAACTTACAACGGGATC+AGG | 0.468492 | 1.4:+4865443 | None:intergenic |
| AAATCTTACCATTTCTGTGT+TGG | 0.468836 | 1.4:+4862802 | None:intergenic |
| TCAAATTAATACCAGAATGT+TGG | 0.472200 | 1.4:-4863427 | MS.gene66451:intron |
| TGGTCCAATAATTATGTCTC+AGG | 0.477103 | 1.4:-4865756 | MS.gene66451:intron |
| TTGGGTTTAAAGTTCTCGTT+GGG | 0.479071 | 1.4:+4865163 | None:intergenic |
| ACTTTGAAACATGGAATGTT+GGG | 0.479098 | 1.4:-4863399 | MS.gene66451:CDS |
| TTATTTCAAAAGGCTAAAGA+TGG | 0.480940 | 1.4:-4866381 | MS.gene66451:CDS |
| GTGGCCAGACTTATTTCAAA+AGG | 0.481426 | 1.4:-4866391 | MS.gene66451:CDS |
| CGGGTGTGCTTCTTGGATAG+TGG | 0.483949 | 1.4:+4867763 | None:intergenic |
| TTTGTGCTGAATGGAATTAT+GGG | 0.485197 | 1.4:-4866118 | MS.gene66451:intron |
| AATGGAGGAACTTCCAGTTA+TGG | 0.487302 | 1.4:+4863165 | None:intergenic |
| CACTTTGAAACATGGAATGT+TGG | 0.488183 | 1.4:-4863400 | MS.gene66451:CDS |
| TCTTGGTTGTGCTTGAAGAA+TGG | 0.488347 | 1.4:-4862658 | MS.gene66451:CDS |
| TCTGTTCTGAAAGCCATCCC+TGG | 0.489582 | 1.4:+4865984 | None:intergenic |
| GTCTAGATACTGGTGTACCT+TGG | 0.490231 | 1.4:-4865490 | MS.gene66451:CDS |
| TCTAGATACTGGTGTACCTT+GGG | 0.490711 | 1.4:-4865489 | MS.gene66451:CDS |
| CGACACAAAATCTGCGGCAA+CGG | 0.500314 | 1.4:-4864335 | MS.gene66451:CDS |
| GAATGGGGAGGTGACCCTAC+TGG | 0.503961 | 1.4:-4862641 | MS.gene66451:CDS |
| GATCCTACAGTCACATGGCT+TGG | 0.504519 | 1.4:-4864521 | MS.gene66451:CDS |
| CCAAAATGCAGGACAAATTG+TGG | 0.507299 | 1.4:-4862829 | MS.gene66451:CDS |
| ATGGCTGTAGGTCTAGATAC+TGG | 0.511595 | 1.4:-4865500 | MS.gene66451:CDS |
| GCTGCCACTCGGCGCGTCAA+AGG | 0.512668 | 1.4:+4862990 | None:intergenic |
| GAATGGGAAATTGGTGCTCC+TGG | 0.513051 | 1.4:-4865551 | MS.gene66451:CDS |
| TGTTGGATAGGTTGGACTAA+AGG | 0.513449 | 1.4:-4863209 | MS.gene66451:intron |
| ATGTGGACTGAGAATTGGTC+TGG | 0.514008 | 1.4:-4865139 | MS.gene66451:CDS |
| GCTCAAGTATGTTCCAGGGA+TGG | 0.514701 | 1.4:-4865997 | MS.gene66451:CDS |
| GAGAGTTTGTTTCAAACTCA+GGG | 0.516652 | 1.4:-4865779 | MS.gene66451:CDS |
| CTAGACCCTTCAATGTTACT+GGG | 0.516715 | 1.4:+4863368 | None:intergenic |
| CTTACCTTGTACCATGTCAA+AGG | 0.519467 | 1.4:+4863106 | None:intergenic |
| TTCTTTGTCCATCAATCACA+AGG | 0.521053 | 1.4:+4867808 | None:intergenic |
| ATGTCCATTCCAAAATACAT+AGG | 0.521663 | 1.4:+4866338 | None:intergenic |
| CTACTCATATCTAGTGCCAC+TGG | 0.522187 | 1.4:+4862964 | None:intergenic |
| AACTTCCAGTTATGGTATGA+AGG | 0.525743 | 1.4:+4863173 | None:intergenic |
| ATGAATGTAGGAACTGTGTA+TGG | 0.525837 | 1.4:-4863655 | MS.gene66451:intron |
| TGGATAGGTATCATATTCCT+CGG | 0.527869 | 1.4:-4862706 | MS.gene66451:intron |
| TTACCATGTGCTATATATGC+AGG | 0.531919 | 1.4:+4862889 | None:intergenic |
| TCTTGCTTGCACATGTCCCA+AGG | 0.532274 | 1.4:+4865473 | None:intergenic |
| AGATATGAGTAGCATGGGAA+AGG | 0.533528 | 1.4:-4862953 | MS.gene66451:CDS |
| TTGGCAGAAATGGTCTTACA+AGG | 0.535055 | 1.4:-4863323 | MS.gene66451:intron |
| TTTGGGTTTAAAGTTCTCGT+TGG | 0.535843 | 1.4:+4865162 | None:intergenic |
| GTTAGGCCCAGTAACATTGA+AGG | 0.535870 | 1.4:-4863374 | MS.gene66451:CDS |
| GCCACTGGATCGCTGCCACT+CGG | 0.538573 | 1.4:+4862979 | None:intergenic |
| AGGAACTGTGTATGGAGGAT+TGG | 0.540099 | 1.4:-4863647 | MS.gene66451:CDS |
| TATGATGGAATCGTCGTCAC+TGG | 0.542393 | 1.4:+4864037 | None:intergenic |
| TGGATAAACGACCAAAGCAT+TGG | 0.545055 | 1.4:-4862922 | MS.gene66451:CDS |
| TCGTCGTCACTGGAGTAGGC+AGG | 0.545444 | 1.4:+4864047 | None:intergenic |
| AGGGGACAAGAGACTTGTCT+TGG | 0.546148 | 1.4:-4863342 | MS.gene66451:CDS |
| ACTCTTACCATAAATTCAGC+AGG | 0.547224 | 1.4:-4863795 | MS.gene66451:CDS |
| TCATAGACCAACTGAAGACT+TGG | 0.549584 | 1.4:-4864984 | MS.gene66451:CDS |
| ACATTGAAGGGTCTAGATGA+GGG | 0.549862 | 1.4:-4863361 | MS.gene66451:CDS |
| TGAGTATGGACCTGTGGAAT+GGG | 0.552441 | 1.4:-4865567 | MS.gene66451:CDS |
| GAGTCCAAGTGGGAACGTCT+TGG | 0.553534 | 1.4:-4862675 | MS.gene66451:CDS |
| GGTATCATATTCCTCGGTCA+TGG | 0.554459 | 1.4:-4862700 | MS.gene66451:CDS |
| GGAATCGTCGTCACTGGAGT+AGG | 0.554946 | 1.4:+4864043 | None:intergenic |
| TGATCCTTGTGTCCAATCAA+TGG | 0.555014 | 1.4:+4863147 | None:intergenic |
| GATATGAGTAGCATGGGAAA+GGG | 0.555262 | 1.4:-4862952 | MS.gene66451:CDS |
| GCACCAATTTCCCATTCCAC+AGG | 0.555297 | 1.4:+4865557 | None:intergenic |
| TTTCCAAGCCATGTGACTGT+AGG | 0.556295 | 1.4:+4864518 | None:intergenic |
| ACAACCTTTGACATGGTACA+AGG | 0.556753 | 1.4:-4863110 | MS.gene66451:intron |
| GGACTGAGAATTGGTCTGGC+TGG | 0.561829 | 1.4:-4865135 | MS.gene66451:intron |
| GCACTAGATATGAGTAGCAT+GGG | 0.566286 | 1.4:-4862958 | MS.gene66451:CDS |
| GGCACTAGATATGAGTAGCA+TGG | 0.566466 | 1.4:-4862959 | MS.gene66451:CDS |
| GGAAATTGGTGCTCCTGGAA+AGG | 0.566691 | 1.4:-4865546 | MS.gene66451:CDS |
| TGGGCTGCTCAAATGGCTGT+AGG | 0.566955 | 1.4:-4865512 | MS.gene66451:CDS |
| CATAGGTTTGAATAACATCA+AGG | 0.569765 | 1.4:+4866355 | None:intergenic |
| ATGAGTATGGACCTGTGGAA+TGG | 0.571228 | 1.4:-4865568 | MS.gene66451:CDS |
| TCCTCCATTGATTGGACACA+AGG | 0.572202 | 1.4:-4863151 | MS.gene66451:CDS |
| TTTCAAAAGGCTAAAGATGG+AGG | 0.574864 | 1.4:-4866378 | MS.gene66451:CDS |
| TTCCATTCAGCACAAACGTA+GGG | 0.575351 | 1.4:+4866125 | None:intergenic |
| GTCAAGCTAGCACAACAAGC+TGG | 0.575439 | 1.4:-4866173 | MS.gene66451:CDS |
| CTGTGGATCCTACAGTCACA+TGG | 0.578432 | 1.4:-4864526 | MS.gene66451:CDS |
| GGATCCACAGAAATCAAAGC+TGG | 0.580873 | 1.4:+4864539 | None:intergenic |
| GCCGAGTGGCAGCGATCCAG+TGG | 0.582197 | 1.4:-4862980 | MS.gene66451:CDS |
| GCTGAATTTATGGTAAGAGT+AGG | 0.582723 | 1.4:+4863798 | None:intergenic |
| TGAGCCAGCTTTGATTTCTG+TGG | 0.583476 | 1.4:-4864543 | MS.gene66451:CDS |
| TCACCAATGAAATTCCAGTA+GGG | 0.584721 | 1.4:+4862627 | None:intergenic |
| AACATTGAAGGGTCTAGATG+AGG | 0.588983 | 1.4:-4863362 | MS.gene66451:CDS |
| TTTGGCTCAAGTATGTTCCA+GGG | 0.591443 | 1.4:-4866001 | MS.gene66451:CDS |
| TTCACCAATGAAATTCCAGT+AGG | 0.593759 | 1.4:+4862626 | None:intergenic |
| CCATAAAAGGATGACTCCCA+TGG | 0.597750 | 1.4:-4864105 | MS.gene66451:CDS |
| TTGTAGATTGACACTTGCAA+TGG | 0.599307 | 1.4:-4865208 | MS.gene66451:intron |
| GCAAATATGATCTACCACCT+TGG | 0.599730 | 1.4:-4864297 | MS.gene66451:CDS |
| ACAACCAAGACGTTCCCACT+TGG | 0.601417 | 1.4:+4862671 | None:intergenic |
| GAAAGTGTTAACCTAAAGGT+CGG | 0.607496 | 1.4:-4863601 | MS.gene66451:CDS |
| AAGGAATGCAGCACAGACAC+TGG | 0.612057 | 1.4:+4864366 | None:intergenic |
| AGAACTTTAAACCCAAAATG+TGG | 0.614315 | 1.4:-4865156 | MS.gene66451:CDS |
| TGTGCTTCTTGGATAGTGGA+TGG | 0.615066 | 1.4:+4867767 | None:intergenic |
| TTGGTCTGCACTTTGAAACA+TGG | 0.615627 | 1.4:-4863408 | MS.gene66451:CDS |
| GGAAGAATGCTGACAGACCA+AGG | 0.618216 | 1.4:+4864280 | None:intergenic |
| CGGTCATGGTTGAGTCCAAG+TGG | 0.619900 | 1.4:-4862686 | MS.gene66451:CDS |
| GCGATTCTTCAGATTATCTG+TGG | 0.622203 | 1.4:-4863980 | MS.gene66451:CDS |
| GAGTATGCCAAGTCTTCAGT+TGG | 0.624897 | 1.4:+4864977 | None:intergenic |
| TATAGGTACACTGATTTCGG+TGG | 0.628326 | 1.4:-4865016 | MS.gene66451:intron |
| CAATCAAATGTAGTATCCAT+GGG | 0.628604 | 1.4:+4864089 | None:intergenic |
| TTAGGCCCAGTAACATTGAA+GGG | 0.630859 | 1.4:-4863373 | MS.gene66451:CDS |
| AGCATCATAATCATAGCTTG+TGG | 0.636529 | 1.4:+4864724 | None:intergenic |
| TGTGATGAATGTAATTACGC+TGG | 0.639969 | 1.4:-4862865 | MS.gene66451:CDS |
| TTGGTTGTGCTTGAAGAATG+GGG | 0.644178 | 1.4:-4862656 | MS.gene66451:CDS |
| TACCATATAGTAGTTAACAA+AGG | 0.653367 | 1.4:+4864925 | None:intergenic |
| TCTTTGTCCATCAATCACAA+GGG | 0.658868 | 1.4:+4867809 | None:intergenic |
| GCTAGATTCATACAAAATCG+TGG | 0.659974 | 1.4:-4864950 | MS.gene66451:CDS |
| TGGCCTGCATATATAGCACA+TGG | 0.662930 | 1.4:-4862892 | MS.gene66451:CDS |
| CATTGAAGGGTCTAGATGAG+GGG | 0.664668 | 1.4:-4863360 | MS.gene66451:CDS |
| ACAACCTTTGACGCGCCGAG+TGG | 0.672410 | 1.4:-4862994 | MS.gene66451:CDS |
| AATGTAGGAACTGTGTATGG+AGG | 0.675173 | 1.4:-4863652 | MS.gene66451:intron |
| ATTCCATTCAGCACAAACGT+AGG | 0.678066 | 1.4:+4866124 | None:intergenic |
| TGAGAATGAGTATGGACCTG+TGG | 0.679660 | 1.4:-4865573 | MS.gene66451:CDS |
| CTTTGAAACATGGAATGTTG+GGG | 0.679854 | 1.4:-4863398 | MS.gene66451:CDS |
| TCCTTGTGTCCAATCAATGG+AGG | 0.680608 | 1.4:+4863150 | None:intergenic |
| ATTTGATTGTAGTATCATGG+AGG | 0.681855 | 1.4:-4864785 | MS.gene66451:intron |
| CTTGGACTCAACCATGACCG+AGG | 0.682721 | 1.4:+4862689 | None:intergenic |
| GGTCATGGTTGAGTCCAAGT+GGG | 0.689731 | 1.4:-4862685 | MS.gene66451:CDS |
| AAACTACGACACAAAATCTG+CGG | 0.691374 | 1.4:-4864341 | MS.gene66451:CDS |
| AGTTTGTTTCAAACTCAGGG+TGG | 0.697300 | 1.4:-4865776 | MS.gene66451:CDS |
| CTATCCAAGAAGCACACCCG+AGG | 0.711494 | 1.4:-4867760 | MS.gene66451:intron |
| GTTGTGCTTGAAGAATGGGG+AGG | 0.774502 | 1.4:-4862653 | MS.gene66451:CDS |
| AGAATGCTGACAGACCAAGG+TGG | 0.820211 | 1.4:+4864283 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTTTAATATTT+TGG | - | chr1.4:4867772-4867791 | MS.gene66451:CDS | 0.0% |
| !! | ATATAATAGAAAATAAAGAA+AGG | + | chr1.4:4863262-4863281 | None:intergenic | 10.0% |
| !!! | AACTTAACATTTTAAATAAT+TGG | + | chr1.4:4863647-4863666 | None:intergenic | 10.0% |
| !!! | CTTATTTATTTATTTTTTGA+GGG | + | chr1.4:4864848-4864867 | None:intergenic | 10.0% |
| !!! | TAATTTAAATGAACTTTTTA+AGG | + | chr1.4:4863104-4863123 | None:intergenic | 10.0% |
| !!! | TATTTATAGCTTTAAATTAA+TGG | + | chr1.4:4865413-4865432 | None:intergenic | 10.0% |
| !!! | TCTTATTTATTTATTTTTTG+AGG | + | chr1.4:4864849-4864868 | None:intergenic | 10.0% |
| !!! | TTTTATTATAAAGTTTTTGT+TGG | - | chr1.4:4864794-4864813 | MS.gene66451:intron | 10.0% |
| !!! | TTTTTTTCTCAAAAAAATTA+AGG | + | chr1.4:4863964-4863983 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAATATTTTGGAT+AGG | - | chr1.4:4867777-4867796 | MS.gene66451:CDS | 10.0% |
| !! | AAAATGTTAAGTTATTTGAT+TGG | - | chr1.4:4863654-4863673 | MS.gene66451:intron | 15.0% |
| !! | AAAGCTATAAATATTTCATT+TGG | - | chr1.4:4865420-4865439 | MS.gene66451:intron | 15.0% |
| !! | AAGCTATAAATATTTCATTT+GGG | - | chr1.4:4865421-4865440 | MS.gene66451:intron | 15.0% |
| !! | AATATATAACAAAAATACAC+TGG | + | chr1.4:4863379-4863398 | None:intergenic | 15.0% |
| !! | AATGAATAAATAAAAGAGAA+AGG | + | chr1.4:4862844-4862863 | None:intergenic | 15.0% |
| !! | ATTAAGTTATATATGAATGT+AGG | - | chr1.4:4866831-4866850 | MS.gene66451:intron | 15.0% |
| !! | ATTTAATCTAATACTGAAAT+TGG | - | chr1.4:4864880-4864899 | MS.gene66451:intron | 15.0% |
| !! | CTTAAAACACATTAAAAATT+TGG | - | chr1.4:4866580-4866599 | MS.gene66451:intron | 15.0% |
| !! | TAATTCAAAAATATTATGGA+GGG | + | chr1.4:4862989-4863008 | None:intergenic | 15.0% |
| !! | TTAACAAAAAAAATCAAACT+AGG | + | chr1.4:4866079-4866098 | None:intergenic | 15.0% |
| !! | TTAATTCAAAAATATTATGG+AGG | + | chr1.4:4862990-4863009 | None:intergenic | 15.0% |
| !!! | AACAAACATATACATAATTT+TGG | + | chr1.4:4862890-4862909 | None:intergenic | 15.0% |
| !!! | AACAGTCAAATTTTAAAATA+AGG | - | chr1.4:4863170-4863189 | MS.gene66451:CDS | 15.0% |
| !!! | TATAAAAAGATATTGACTTT+TGG | + | chr1.4:4863747-4863766 | None:intergenic | 15.0% |
| !!! | TTTTAATTAATCCAAACTTT+TGG | - | chr1.4:4864629-4864648 | MS.gene66451:intron | 15.0% |
| !!! | TTTTTACTTATATTAGTAAC+CGG | + | chr1.4:4863409-4863428 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTAATGTAATCTT+AGG | - | chr1.4:4866088-4866107 | MS.gene66451:intron | 15.0% |
| !! | AAAATAAAAAATGTGCATGT+TGG | + | chr1.4:4863566-4863585 | None:intergenic | 20.0% |
| !! | AAATAATTATTTATGTGCAG+AGG | - | chr1.4:4864466-4864485 | MS.gene66451:intron | 20.0% |
| !! | AAATATTTCATTTGGGAATT+GGG | - | chr1.4:4865428-4865447 | MS.gene66451:intron | 20.0% |
| !! | AAGATAAAACTAAAAGCAAA+AGG | - | chr1.4:4863814-4863833 | MS.gene66451:CDS | 20.0% |
| !! | ATAAGGTTTAAATTGTTTCA+TGG | - | chr1.4:4865820-4865839 | MS.gene66451:CDS | 20.0% |
| !! | CATTTAATAATTGATGTATG+TGG | + | chr1.4:4863483-4863502 | None:intergenic | 20.0% |
| !! | CTTTCACTAAATGTTAATTT+AGG | + | chr1.4:4866882-4866901 | None:intergenic | 20.0% |
| !! | TAAATATTTCATTTGGGAAT+TGG | - | chr1.4:4865427-4865446 | MS.gene66451:intron | 20.0% |
| !! | TAAATTGGAATTTATCATGA+AGG | + | chr1.4:4866795-4866814 | None:intergenic | 20.0% |
| !! | TATATGGTATATGAATATGA+TGG | - | chr1.4:4865587-4865606 | MS.gene66451:intron | 20.0% |
| !! | TATATTTGATTGTAGTATCA+TGG | - | chr1.4:4865710-4865729 | MS.gene66451:intron | 20.0% |
| !! | TTCTTTACAAAACTTTCATT+AGG | + | chr1.4:4866670-4866689 | None:intergenic | 20.0% |
| !!! | AAATTTTACTAATTTCATGC+AGG | - | chr1.4:4866354-4866373 | MS.gene66451:CDS | 20.0% |
| !!! | AATGAAAGTTTTGTAAAGAA+TGG | - | chr1.4:4866670-4866689 | MS.gene66451:intron | 20.0% |
| !!! | CTTCAATAAAGTAACAATTT+TGG | + | chr1.4:4866056-4866075 | None:intergenic | 20.0% |
| !!! | CTTTATGTAAATTTTTCAGA+TGG | + | chr1.4:4865922-4865941 | None:intergenic | 20.0% |
| !!! | GATTTTATTATTGTCTTTGT+GGG | - | chr1.4:4862627-4862646 | MS.gene66451:CDS | 20.0% |
| !!! | TAAGCAAAAATTTGTTCTTA+AGG | + | chr1.4:4863508-4863527 | None:intergenic | 20.0% |
| !!! | TGATTTTATTATTGTCTTTG+TGG | - | chr1.4:4862626-4862645 | MS.gene66451:CDS | 20.0% |
| !!! | TTAATGTGTTTTAAGAAGTT+AGG | + | chr1.4:4866575-4866594 | None:intergenic | 20.0% |
| !!! | TTATTCAAACCTATGTATTT+TGG | - | chr1.4:4864151-4864170 | MS.gene66451:intron | 20.0% |
| !!! | TTTTATGTTACCTATTCTAT+AGG | - | chr1.4:4865465-4865484 | MS.gene66451:CDS | 20.0% |
| ! | AATCTATGTTGTATAGATAC+AGG | + | chr1.4:4864002-4864021 | None:intergenic | 25.0% |
| ! | ACTAATGTTTACACTGAAAA+TGG | + | chr1.4:4866647-4866666 | None:intergenic | 25.0% |
| ! | ACTTCAAAAAACTTCTAACA+TGG | + | chr1.4:4866321-4866340 | None:intergenic | 25.0% |
| ! | AGATTTATTGAAAATGCAGA+TGG | + | chr1.4:4867464-4867483 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr1.4:4863444-4863463 | MS.gene66451:intron | 25.0% |
| ! | GTAGTATAGATACTTATTTG+TGG | - | chr1.4:4863868-4863887 | MS.gene66451:intron | 25.0% |
| ! | GTTAAGTTATTTGATTGGTA+AGG | - | chr1.4:4863659-4863678 | MS.gene66451:intron | 25.0% |
| ! | GTTTAAACCATTCGTAAAAT+TGG | - | chr1.4:4863705-4863724 | MS.gene66451:intron | 25.0% |
| ! | TACCATATAGTAGTTAACAA+AGG | + | chr1.4:4865576-4865595 | None:intergenic | 25.0% |
| ! | TCAAATTAATACCAGAATGT+TGG | - | chr1.4:4867071-4867090 | MS.gene66451:intron | 25.0% |
| ! | TGCTTATATTAATGATCAGA+GGG | - | chr1.4:4863522-4863541 | MS.gene66451:intron | 25.0% |
| ! | TTAAAAAACAACCTTTGACA+TGG | - | chr1.4:4867381-4867400 | MS.gene66451:intron | 25.0% |
| ! | TTAACGCCTTTCAAAATATT+AGG | - | chr1.4:4865872-4865891 | MS.gene66451:intron | 25.0% |
| ! | TTATTTCAAAAGGCTAAAGA+TGG | - | chr1.4:4864117-4864136 | MS.gene66451:CDS | 25.0% |
| ! | TTCATTGCATAATATATGCA+GGG | + | chr1.4:4863237-4863256 | None:intergenic | 25.0% |
| ! | TTGCTTATATTAATGATCAG+AGG | - | chr1.4:4863521-4863540 | MS.gene66451:intron | 25.0% |
| ! | TTTACCTGAGACATAATTAT+TGG | + | chr1.4:4864749-4864768 | None:intergenic | 25.0% |
| !! | AAGGAATTTCTAAGAAGAAA+AGG | + | chr1.4:4866776-4866795 | None:intergenic | 25.0% |
| !! | ATTTTTCTTATGCAATGTCT+TGG | - | chr1.4:4864019-4864038 | MS.gene66451:CDS | 25.0% |
| !! | CAAATTTTATGTTGTTGGAT+AGG | - | chr1.4:4867277-4867296 | MS.gene66451:intron | 25.0% |
| !! | TGAGACAAATTTTATGTTGT+TGG | - | chr1.4:4867272-4867291 | MS.gene66451:intron | 25.0% |
| !! | TTTCATCATGTTCACAATTT+TGG | + | chr1.4:4864696-4864715 | None:intergenic | 25.0% |
| !!! | CAAAGAAGAATTTTGATATC+TGG | - | chr1.4:4862706-4862725 | MS.gene66451:intron | 25.0% |
| !!! | GTTCTACATGTTTTTGTTAA+TGG | - | chr1.4:4866730-4866749 | MS.gene66451:intron | 25.0% |
| AAACCATTCGTAAAATTGGA+AGG | - | chr1.4:4863709-4863728 | MS.gene66451:intron | 30.0% | |
| AAATCTTACCATTTCTGTGT+TGG | + | chr1.4:4867699-4867718 | None:intergenic | 30.0% | |
| AACTAATGTTGTACACATGT+TGG | + | chr1.4:4862790-4862809 | None:intergenic | 30.0% | |
| AAGTTGGAATGTAGTAAACT+AGG | - | chr1.4:4863343-4863362 | MS.gene66451:CDS | 30.0% | |
| AATATCTTCGTTACATTTCC+AGG | + | chr1.4:4864195-4864214 | None:intergenic | 30.0% | |
| AATCAGTGTACCTATAGAAT+AGG | + | chr1.4:4865478-4865497 | None:intergenic | 30.0% | |
| ACTAATTTCATGCAGGTTAA+TGG | - | chr1.4:4866361-4866380 | MS.gene66451:CDS | 30.0% | |
| AGAACTTTAAACCCAAAATG+TGG | - | chr1.4:4865342-4865361 | MS.gene66451:intron | 30.0% | |
| AGTTATTTGATTGGTAAGGA+AGG | - | chr1.4:4863663-4863682 | MS.gene66451:intron | 30.0% | |
| ATGTCCATTCCAAAATACAT+AGG | + | chr1.4:4864163-4864182 | None:intergenic | 30.0% | |
| ATGTTGTATAGATACAGGTA+TGG | + | chr1.4:4863997-4864016 | None:intergenic | 30.0% | |
| ATTGAAACTCCAACCTTAAA+TGG | + | chr1.4:4864547-4864566 | None:intergenic | 30.0% | |
| ATTGGTAAGGAAGGATAATA+TGG | - | chr1.4:4863672-4863691 | MS.gene66451:intron | 30.0% | |
| ATTTGATTGTAGTATCATGG+AGG | - | chr1.4:4865713-4865732 | MS.gene66451:intron | 30.0% | |
| CAATCAAATGTAGTATCCAT+GGG | + | chr1.4:4866412-4866431 | None:intergenic | 30.0% | |
| CATAGGTTTGAATAACATCA+AGG | + | chr1.4:4864146-4864165 | None:intergenic | 30.0% | |
| CTCAGTTCATGATAAGATTA+TGG | - | chr1.4:4866029-4866048 | MS.gene66451:intron | 30.0% | |
| CTCCTTTGTTAACTACTATA+TGG | - | chr1.4:4865571-4865590 | MS.gene66451:CDS | 30.0% | |
| GAGAAAGGAAAGCAATAATT+TGG | + | chr1.4:4862829-4862848 | None:intergenic | 30.0% | |
| GATGAATATGGTATGCAATA+AGG | - | chr1.4:4865803-4865822 | MS.gene66451:CDS | 30.0% | |
| GGTACAAATTTGAAGGATAA+AGG | - | chr1.4:4865198-4865217 | MS.gene66451:CDS | 30.0% | |
| GTTCATTGCATAATATATGC+AGG | + | chr1.4:4863238-4863257 | None:intergenic | 30.0% | |
| TACTTATATTAGTAACCGGA+GGG | + | chr1.4:4863405-4863424 | None:intergenic | 30.0% | |
| TATACATCATGCCAAAAGTT+TGG | + | chr1.4:4864643-4864662 | None:intergenic | 30.0% | |
| TATGTTTCTTAATGCAGATG+TGG | - | chr1.4:4864088-4864107 | MS.gene66451:CDS | 30.0% | |
| TCATTGCATAATATATGCAG+GGG | + | chr1.4:4863236-4863255 | None:intergenic | 30.0% | |
| TGATAGATTGAGAATGAGTA+TGG | - | chr1.4:4864917-4864936 | MS.gene66451:intron | 30.0% | |
| TGCATACCATATTCATCAAT+AGG | + | chr1.4:4865800-4865819 | None:intergenic | 30.0% | |
| TGGCATGATGTATATATGTT+AGG | - | chr1.4:4864649-4864668 | MS.gene66451:intron | 30.0% | |
| TGGTAAGATTTCATATAACG+AGG | - | chr1.4:4867708-4867727 | MS.gene66451:intron | 30.0% | |
| TGTCAATCTACAACATAGTT+CGG | + | chr1.4:4865283-4865302 | None:intergenic | 30.0% | |
| TGTTGTATAGATACAGGTAT+GGG | + | chr1.4:4863996-4864015 | None:intergenic | 30.0% | |
| TTACTTATATTAGTAACCGG+AGG | + | chr1.4:4863406-4863425 | None:intergenic | 30.0% | |
| TTGTTATATATTACACCCTC+CGG | - | chr1.4:4863387-4863406 | MS.gene66451:CDS | 30.0% | |
| TTTGTGCTGAATGGAATTAT+GGG | - | chr1.4:4864380-4864399 | MS.gene66451:CDS | 30.0% | |
| TTTGTTAATGGTCAACTTTC+AGG | - | chr1.4:4866742-4866761 | MS.gene66451:intron | 30.0% | |
| ! | AAAACTACAGTTTTGCAATC+AGG | + | chr1.4:4866242-4866261 | None:intergenic | 30.0% |
| ! | CAAAACTGTAGTTTTCAACA+CGG | - | chr1.4:4866247-4866266 | MS.gene66451:intron | 30.0% |
| ! | CTTGTGTACATAAGTTTTCT+CGG | - | chr1.4:4864050-4864069 | MS.gene66451:CDS | 30.0% |
| ! | CTTTTACTAATCCAAAATGC+AGG | - | chr1.4:4867658-4867677 | MS.gene66451:intron | 30.0% |
| ! | TATCATGGAGGAACTAATTT+TGG | - | chr1.4:4865725-4865744 | MS.gene66451:intron | 30.0% |
| ! | TTTCCTTCCAATTTTACGAA+TGG | + | chr1.4:4863715-4863734 | None:intergenic | 30.0% |
| ! | TTTTATGTTGTTGGATAGGT+TGG | - | chr1.4:4867281-4867300 | MS.gene66451:intron | 30.0% |
| !! | ACTTTGAAACATGGAATGTT+GGG | - | chr1.4:4867099-4867118 | MS.gene66451:intron | 30.0% |
| !! | CAAACCTATGTATTTTGGAA+TGG | - | chr1.4:4864156-4864175 | MS.gene66451:intron | 30.0% |
| !! | GGAAGTCCTAATATTTTGAA+AGG | + | chr1.4:4865881-4865900 | None:intergenic | 30.0% |
| !! | TGTTTGTTGTTACTTAATCG+TGG | - | chr1.4:4862902-4862921 | MS.gene66451:CDS | 30.0% |
| !! | TTCTATAGGTACACTGATTT+CGG | - | chr1.4:4865479-4865498 | MS.gene66451:CDS | 30.0% |
| !!! | ACATAATTTTGGTTCATGCA+TGG | + | chr1.4:4862879-4862898 | None:intergenic | 30.0% |
| !!! | TTAGCCTTTTGAAATAAGTC+TGG | + | chr1.4:4864114-4864133 | None:intergenic | 30.0% |
| AAACTACGACACAAAATCTG+CGG | - | chr1.4:4866157-4866176 | MS.gene66451:CDS | 35.0% | |
| AACAGACAATGAGCCATTTA+AGG | - | chr1.4:4864531-4864550 | MS.gene66451:CDS | 35.0% | |
| AACATGACCTGCTGAATTTA+TGG | + | chr1.4:4866713-4866732 | None:intergenic | 35.0% | |
| AACTTCCAGTTATGGTATGA+AGG | + | chr1.4:4867328-4867347 | None:intergenic | 35.0% | |
| AATGTTGTACACATGTTGGA+TGG | + | chr1.4:4862786-4862805 | None:intergenic | 35.0% | |
| ACCCACAAAATGGTGAAAAA+AGG | + | chr1.4:4862931-4862950 | None:intergenic | 35.0% | |
| ACTCTTACCATAAATTCAGC+AGG | - | chr1.4:4866703-4866722 | MS.gene66451:intron | 35.0% | |
| ACTGACTAAATGAGATGTCT+GGG | - | chr1.4:4863198-4863217 | MS.gene66451:CDS | 35.0% | |
| AGCATCATAATCATAGCTTG+TGG | + | chr1.4:4865777-4865796 | None:intergenic | 35.0% | |
| ATGAATGTAGGAACTGTGTA+TGG | - | chr1.4:4866843-4866862 | MS.gene66451:intron | 35.0% | |
| ATGGACATAGCTTCCATAAA+AGG | - | chr1.4:4866380-4866399 | MS.gene66451:CDS | 35.0% | |
| CAGATGGTCATATGTAACAT+TGG | + | chr1.4:4867448-4867467 | None:intergenic | 35.0% | |
| CATCATAGCAAATGCACTTT+GGG | - | chr1.4:4866477-4866496 | MS.gene66451:intron | 35.0% | |
| CCAATCAAATGTAGTATCCA+TGG | + | chr1.4:4866413-4866432 | None:intergenic | 35.0% | |
| CCACAAAATGGTGAAAAAAG+GGG | + | chr1.4:4862929-4862948 | None:intergenic | 35.0% | |
| CCATGGATACTACATTTGAT+TGG | - | chr1.4:4866410-4866429 | MS.gene66451:intron | 35.0% | |
| CCCACAAAATGGTGAAAAAA+GGG | + | chr1.4:4862930-4862949 | None:intergenic | 35.0% | |
| CTGCTAAGGTAAACTTACAA+CGG | + | chr1.4:4865065-4865084 | None:intergenic | 35.0% | |
| CTTTATGTTCACTTGCGTAT+TGG | - | chr1.4:4864349-4864368 | MS.gene66451:CDS | 35.0% | |
| GACTTCCAAATGAACCAAAA+TGG | - | chr1.4:4865894-4865913 | MS.gene66451:intron | 35.0% | |
| GATGCTCCTATTGATGAATA+TGG | - | chr1.4:4865791-4865810 | MS.gene66451:CDS | 35.0% | |
| GCAACGCTTCTTATTGTAAT+TGG | + | chr1.4:4864822-4864841 | None:intergenic | 35.0% | |
| GCTAGATTCATACAAAATCG+TGG | - | chr1.4:4865548-4865567 | MS.gene66451:CDS | 35.0% | |
| GCTGAATTTATGGTAAGAGT+AGG | + | chr1.4:4866703-4866722 | None:intergenic | 35.0% | |
| GCTTGGAAATAAAAACCTTG+AGG | - | chr1.4:4865994-4866013 | MS.gene66451:CDS | 35.0% | |
| GTCATATGTAACATTGGCAA+AGG | + | chr1.4:4867442-4867461 | None:intergenic | 35.0% | |
| GTTTGTGCTGAATGGAATTA+TGG | - | chr1.4:4864379-4864398 | MS.gene66451:CDS | 35.0% | |
| TCACCAATGAAATTCCAGTA+GGG | + | chr1.4:4867874-4867893 | None:intergenic | 35.0% | |
| TCGAACGAGATAATACTAAC+CGG | + | chr1.4:4866963-4866982 | None:intergenic | 35.0% | |
| TCTTTGTCCATCAATCACAA+GGG | + | chr1.4:4862692-4862711 | None:intergenic | 35.0% | |
| TGCTAAGGTAAACTTACAAC+GGG | + | chr1.4:4865064-4865083 | None:intergenic | 35.0% | |
| TGGAAAGGCTTACACAAAAT+GGG | - | chr1.4:4864967-4864986 | MS.gene66451:CDS | 35.0% | |
| TGGATAGGTATCATATTCCT+CGG | - | chr1.4:4867792-4867811 | MS.gene66451:CDS | 35.0% | |
| TGGTCCAATAATTATGTCTC+AGG | - | chr1.4:4864742-4864761 | MS.gene66451:CDS | 35.0% | |
| TGTGATGAATGTAATTACGC+TGG | - | chr1.4:4867633-4867652 | MS.gene66451:intron | 35.0% | |
| TGTGTTTAGTGTTAGAGAAG+AGG | - | chr1.4:4865177-4865196 | MS.gene66451:CDS | 35.0% | |
| TTACCATGTGCTATATATGC+AGG | + | chr1.4:4867612-4867631 | None:intergenic | 35.0% | |
| TTATTGTCTTTGTGGGTTTG+TGG | - | chr1.4:4862634-4862653 | MS.gene66451:CDS | 35.0% | |
| TTCACCAATGAAATTCCAGT+AGG | + | chr1.4:4867875-4867894 | None:intergenic | 35.0% | |
| TTCTTTGTCCATCAATCACA+AGG | + | chr1.4:4862693-4862712 | None:intergenic | 35.0% | |
| TTGTAGATTGACACTTGCAA+TGG | - | chr1.4:4865290-4865309 | MS.gene66451:intron | 35.0% | |
| TTTCAAAAGGCTAAAGATGG+AGG | - | chr1.4:4864120-4864139 | MS.gene66451:CDS | 35.0% | |
| ! | AGAGAGTTTGTTTCAAACTC+AGG | - | chr1.4:4864718-4864737 | MS.gene66451:CDS | 35.0% |
| ! | CAATTCTCAGTCCACATTTT+GGG | + | chr1.4:4865356-4865375 | None:intergenic | 35.0% |
| ! | CATAGCTTGTGGCAATAAAA+AGG | + | chr1.4:4865766-4865785 | None:intergenic | 35.0% |
| ! | GAGAAGAGGTACAAATTTGA+AGG | - | chr1.4:4865191-4865210 | MS.gene66451:CDS | 35.0% |
| ! | GAGAGTTTGTTTCAAACTCA+GGG | - | chr1.4:4864719-4864738 | MS.gene66451:CDS | 35.0% |
| ! | TACTGACTAAATGAGATGTC+TGG | - | chr1.4:4863197-4863216 | MS.gene66451:CDS | 35.0% |
| ! | TCTTTACTTAGTGTTGCTGT+GGG | - | chr1.4:4866933-4866952 | MS.gene66451:intron | 35.0% |
| ! | TTCTTTACTTAGTGTTGCTG+TGG | - | chr1.4:4866932-4866951 | MS.gene66451:intron | 35.0% |
| ! | TTGGGTTTAAAGTTCTCGTT+GGG | + | chr1.4:4865338-4865357 | None:intergenic | 35.0% |
| ! | TTTGGGTTTAAAGTTCTCGT+TGG | + | chr1.4:4865339-4865358 | None:intergenic | 35.0% |
| ! | TTTTCACCATTTTGTGGGTT+TGG | - | chr1.4:4862932-4862951 | MS.gene66451:CDS | 35.0% |
| !! | AATTTTGGTCGAACATCTAG+TGG | - | chr1.4:4865740-4865759 | MS.gene66451:intron | 35.0% |
| !! | ATTTTGTGTCGTAGTTTGCA+AGG | + | chr1.4:4866154-4866173 | None:intergenic | 35.0% |
| !! | CACTTTGAAACATGGAATGT+TGG | - | chr1.4:4867098-4867117 | MS.gene66451:intron | 35.0% |
| !! | CTTTGAAACATGGAATGTTG+GGG | - | chr1.4:4867100-4867119 | MS.gene66451:intron | 35.0% |
| !! | GAACTTAGAAGTATTCACAC+AGG | + | chr1.4:4865633-4865652 | None:intergenic | 35.0% |
| !! | TTTTTCAGATGGCTCCATTT+TGG | + | chr1.4:4865911-4865930 | None:intergenic | 35.0% |
| !!! | CCCTTTTTTCACCATTTTGT+GGG | - | chr1.4:4862927-4862946 | MS.gene66451:CDS | 35.0% |
| AACATTGAAGGGTCTAGATG+AGG | - | chr1.4:4867136-4867155 | MS.gene66451:intron | 40.0% | |
| AATGGAGGAACTTCCAGTTA+TGG | + | chr1.4:4867336-4867355 | None:intergenic | 40.0% | |
| AATGTAGGAACTGTGTATGG+AGG | - | chr1.4:4866846-4866865 | MS.gene66451:intron | 40.0% | |
| ACAACCTTTGACATGGTACA+AGG | - | chr1.4:4867388-4867407 | MS.gene66451:intron | 40.0% | |
| ACATTGAAGGGTCTAGATGA+GGG | - | chr1.4:4867137-4867156 | MS.gene66451:intron | 40.0% | |
| AGATATGAGTAGCATGGGAA+AGG | - | chr1.4:4867545-4867564 | MS.gene66451:intron | 40.0% | |
| ATTCCATTCAGCACAAACGT+AGG | + | chr1.4:4864377-4864396 | None:intergenic | 40.0% | |
| CCAAAATGCAGGACAAATTG+TGG | - | chr1.4:4867669-4867688 | MS.gene66451:intron | 40.0% | |
| CCATCATAGCAAATGCACTT+TGG | - | chr1.4:4866476-4866495 | MS.gene66451:intron | 40.0% | |
| CTAGACCCTTCAATGTTACT+GGG | + | chr1.4:4867133-4867152 | None:intergenic | 40.0% | |
| CTGACTAAATGAGATGTCTG+GGG | - | chr1.4:4863199-4863218 | MS.gene66451:CDS | 40.0% | |
| CTGGAAAGGCTTACACAAAA+TGG | - | chr1.4:4864966-4864985 | MS.gene66451:CDS | 40.0% | |
| CTTACCTTGTACCATGTCAA+AGG | + | chr1.4:4867395-4867414 | None:intergenic | 40.0% | |
| CTTGGTTGTGCTTGAAGAAT+GGG | - | chr1.4:4867841-4867860 | MS.gene66451:CDS | 40.0% | |
| GAGTCATAGACTTTACCTCA+AGG | + | chr1.4:4866012-4866031 | None:intergenic | 40.0% | |
| GATATGAGTAGCATGGGAAA+GGG | - | chr1.4:4867546-4867565 | MS.gene66451:intron | 40.0% | |
| GCAAATATGATCTACCACCT+TGG | - | chr1.4:4866201-4866220 | MS.gene66451:CDS | 40.0% | |
| GCAACGGTTACATTTGGAAA+TGG | - | chr1.4:4866179-4866198 | MS.gene66451:CDS | 40.0% | |
| GCACTAGATATGAGTAGCAT+GGG | - | chr1.4:4867540-4867559 | MS.gene66451:intron | 40.0% | |
| GCGATTCTTCAGATTATCTG+TGG | - | chr1.4:4866518-4866537 | MS.gene66451:intron | 40.0% | |
| GTGGCCAGACTTATTTCAAA+AGG | - | chr1.4:4864107-4864126 | MS.gene66451:CDS | 40.0% | |
| TCATAGACCAACTGAAGACT+TGG | - | chr1.4:4865514-4865533 | MS.gene66451:CDS | 40.0% | |
| TCTAGACCCTTCAATGTTAC+TGG | + | chr1.4:4867134-4867153 | None:intergenic | 40.0% | |
| TCTAGATACTGGTGTACCTT+GGG | - | chr1.4:4865009-4865028 | MS.gene66451:CDS | 40.0% | |
| TCTTGGTTGTGCTTGAAGAA+TGG | - | chr1.4:4867840-4867859 | MS.gene66451:CDS | 40.0% | |
| TGACCCTACTGGAATTTCAT+TGG | - | chr1.4:4867868-4867887 | MS.gene66451:CDS | 40.0% | |
| TGATCCTTGTGTCCAATCAA+TGG | + | chr1.4:4867354-4867373 | None:intergenic | 40.0% | |
| TGCATAATATATGCAGGGGT+CGG | + | chr1.4:4863232-4863251 | None:intergenic | 40.0% | |
| TGGATAAACGACCAAAGCAT+TGG | - | chr1.4:4867576-4867595 | MS.gene66451:intron | 40.0% | |
| TTAGGCCCAGTAACATTGAA+GGG | - | chr1.4:4867125-4867144 | MS.gene66451:intron | 40.0% | |
| TTCCATTCAGCACAAACGTA+GGG | + | chr1.4:4864376-4864395 | None:intergenic | 40.0% | |
| TTCGTTACATTTCCAGGAGA+AGG | + | chr1.4:4864189-4864208 | None:intergenic | 40.0% | |
| TTGAGCCTTCATACCATAAC+TGG | - | chr1.4:4867320-4867339 | MS.gene66451:intron | 40.0% | |
| TTGGACACAAGGATCATCAT+TGG | - | chr1.4:4867358-4867377 | MS.gene66451:intron | 40.0% | |
| TTGGTTGTGCTTGAAGAATG+GGG | - | chr1.4:4867842-4867861 | MS.gene66451:CDS | 40.0% | |
| ! | AGTTTGTTTCAAACTCAGGG+TGG | - | chr1.4:4864722-4864741 | MS.gene66451:CDS | 40.0% |
| ! | CATTTTGTGTAAGCCTTTCC+AGG | + | chr1.4:4864968-4864987 | None:intergenic | 40.0% |
| ! | CCAAAATGTGGACTGAGAAT+TGG | - | chr1.4:4865354-4865373 | MS.gene66451:intron | 40.0% |
| ! | CCAATTCTCAGTCCACATTT+TGG | + | chr1.4:4865357-4865376 | None:intergenic | 40.0% |
| ! | CCACAATTTGTCCTGCATTT+TGG | + | chr1.4:4867672-4867691 | None:intergenic | 40.0% |
| ! | GACAATGAGCCATTTAAGGT+TGG | - | chr1.4:4864535-4864554 | MS.gene66451:CDS | 40.0% |
| ! | GTTGGATAGGTTGGACTAAA+GGG | - | chr1.4:4867290-4867309 | MS.gene66451:intron | 40.0% |
| ! | TCAGAGGGTGTAATTACCAA+CGG | - | chr1.4:4863537-4863556 | MS.gene66451:intron | 40.0% |
| ! | TGTAGTTTTCAACACGGCAA+CGG | - | chr1.4:4866253-4866272 | MS.gene66451:intron | 40.0% |
| ! | TGTTGGATAGGTTGGACTAA+AGG | - | chr1.4:4867289-4867308 | MS.gene66451:intron | 40.0% |
| ! | TTGGCAGAAATGGTCTTACA+AGG | - | chr1.4:4867175-4867194 | MS.gene66451:intron | 40.0% |
| ! | TTTGGCTCAAGTATGTTCCA+GGG | - | chr1.4:4864497-4864516 | MS.gene66451:intron | 40.0% |
| !! | CCAAAGTGCATTTGCTATGA+TGG | + | chr1.4:4866479-4866498 | None:intergenic | 40.0% |
| !! | TATAGGTACACTGATTTCGG+TGG | - | chr1.4:4865482-4865501 | MS.gene66451:CDS | 40.0% |
| !! | TTGGTCTGCACTTTGAAACA+TGG | - | chr1.4:4867090-4867109 | MS.gene66451:intron | 40.0% |
| !!! | CCCCTTTTTTCACCATTTTG+TGG | - | chr1.4:4862926-4862945 | MS.gene66451:CDS | 40.0% |
| !!! | TGGCTCCATTTTGGTTCATT+TGG | + | chr1.4:4865902-4865921 | None:intergenic | 40.0% |
| AGGAACTGTGTATGGAGGAT+TGG | - | chr1.4:4866851-4866870 | MS.gene66451:intron | 45.0% | |
| ATGAGTATGGACCTGTGGAA+TGG | - | chr1.4:4864930-4864949 | MS.gene66451:CDS | 45.0% | |
| ATGGCTGTAGGTCTAGATAC+TGG | - | chr1.4:4864998-4865017 | MS.gene66451:CDS | 45.0% | |
| CAAAGTGCAGACCAACATTC+TGG | + | chr1.4:4867085-4867104 | None:intergenic | 45.0% | |
| CACAAAGCCCTTGTGATTGA+TGG | - | chr1.4:4862682-4862701 | MS.gene66451:CDS | 45.0% | |
| CATTGAAGGGTCTAGATGAG+GGG | - | chr1.4:4867138-4867157 | MS.gene66451:intron | 45.0% | |
| CCATAAAAGGATGACTCCCA+TGG | - | chr1.4:4866393-4866412 | MS.gene66451:CDS | 45.0% | |
| CTACTCATATCTAGTGCCAC+TGG | + | chr1.4:4867537-4867556 | None:intergenic | 45.0% | |
| CTGGAAGTTCCTCCATTGAT+TGG | - | chr1.4:4867339-4867358 | MS.gene66451:intron | 45.0% | |
| GAGACTTGTCTTGGCAGAAA+TGG | - | chr1.4:4867165-4867184 | MS.gene66451:intron | 45.0% | |
| GAGTATGCCAAGTCTTCAGT+TGG | + | chr1.4:4865524-4865543 | None:intergenic | 45.0% | |
| GCATAATATATGCAGGGGTC+GGG | + | chr1.4:4863231-4863250 | None:intergenic | 45.0% | |
| GCATGGGAAAGGGTGAAATA+TGG | - | chr1.4:4867556-4867575 | MS.gene66451:intron | 45.0% | |
| GGAACATACTTGAGCCAAAC+AGG | + | chr1.4:4864496-4864515 | None:intergenic | 45.0% | |
| GGATCCACAGAAATCAAAGC+TGG | + | chr1.4:4865962-4865981 | None:intergenic | 45.0% | |
| GGATGACCAAACCCACAAAA+TGG | + | chr1.4:4862941-4862960 | None:intergenic | 45.0% | |
| GGCACTAGATATGAGTAGCA+TGG | - | chr1.4:4867539-4867558 | MS.gene66451:intron | 45.0% | |
| GGTAAACTTACAACGGGATC+AGG | + | chr1.4:4865058-4865077 | None:intergenic | 45.0% | |
| GGTATCATATTCCTCGGTCA+TGG | - | chr1.4:4867798-4867817 | MS.gene66451:CDS | 45.0% | |
| GTCTAGATACTGGTGTACCT+TGG | - | chr1.4:4865008-4865027 | MS.gene66451:CDS | 45.0% | |
| GTGGAGAACCAACACAGAAA+TGG | - | chr1.4:4867688-4867707 | MS.gene66451:intron | 45.0% | |
| GTTAGGCCCAGTAACATTGA+AGG | - | chr1.4:4867124-4867143 | MS.gene66451:intron | 45.0% | |
| GTTGTACACATGTTGGATGG+AGG | + | chr1.4:4862783-4862802 | None:intergenic | 45.0% | |
| TACACATGTTGGATGGAGGT+TGG | + | chr1.4:4862779-4862798 | None:intergenic | 45.0% | |
| TCCTTGTGTCCAATCAATGG+AGG | + | chr1.4:4867351-4867370 | None:intergenic | 45.0% | |
| TGAGAATGAGTATGGACCTG+TGG | - | chr1.4:4864925-4864944 | MS.gene66451:intron | 45.0% | |
| TGAGTATGGACCTGTGGAAT+GGG | - | chr1.4:4864931-4864950 | MS.gene66451:CDS | 45.0% | |
| TGGCCTGCATATATAGCACA+TGG | - | chr1.4:4867606-4867625 | MS.gene66451:intron | 45.0% | |
| TGTGCAGAGGATTTCCTGTT+TGG | - | chr1.4:4864479-4864498 | MS.gene66451:intron | 45.0% | |
| TGTGTCGTGTCAATCGTATC+AGG | - | chr1.4:4865103-4865122 | MS.gene66451:intron | 45.0% | |
| TTTCCAAGCCATGTGACTGT+AGG | + | chr1.4:4865983-4866002 | None:intergenic | 45.0% | |
| ! | ACATGGAATGTTGGGGTGTT+AGG | - | chr1.4:4867107-4867126 | MS.gene66451:intron | 45.0% |
| ! | ATGTGGACTGAGAATTGGTC+TGG | - | chr1.4:4865359-4865378 | MS.gene66451:intron | 45.0% |
| ! | CAGAGGGTGTAATTACCAAC+GGG | - | chr1.4:4863538-4863557 | MS.gene66451:intron | 45.0% |
| ! | CCATGGGAGTCATCCTTTTA+TGG | + | chr1.4:4866396-4866415 | None:intergenic | 45.0% |
| ! | GTTTGGCTCAAGTATGTTCC+AGG | - | chr1.4:4864496-4864515 | MS.gene66451:intron | 45.0% |
| ! | TATGATGGAATCGTCGTCAC+TGG | + | chr1.4:4866464-4866483 | None:intergenic | 45.0% |
| ! | TCCTCCATTGATTGGACACA+AGG | - | chr1.4:4867347-4867366 | MS.gene66451:intron | 45.0% |
| ! | TGAGCCAGCTTTGATTTCTG+TGG | - | chr1.4:4865955-4865974 | MS.gene66451:intron | 45.0% |
| ! | TTGCTCTGGTCGCACATTTT+AGG | - | chr1.4:4866999-4867018 | MS.gene66451:intron | 45.0% |
| !! | ACCAAAGCATTGGTCGTCAT+TGG | - | chr1.4:4867586-4867605 | MS.gene66451:intron | 45.0% |
| !! | CACAAAATGGGCTGCTCAAA+TGG | - | chr1.4:4864979-4864998 | MS.gene66451:CDS | 45.0% |
| !! | TGTGCTTCTTGGATAGTGGA+TGG | + | chr1.4:4862734-4862753 | None:intergenic | 45.0% |
| !!! | AAAATTTTAGATTTTAAAAT+AGG | + | chr1.4:4862962-4862981 | None:intergenic | 5.0% |
| !!! | ATTTTAAAATCTAAAATTTT+TGG | - | chr1.4:4862962-4862981 | MS.gene66451:CDS | 5.0% |
| !!! | ATTTTAGATAAAATATTTTA+TGG | - | chr1.4:4863138-4863157 | MS.gene66451:CDS | 5.0% |
| !!! | TTAATTTAGAATATATAAAT+TGG | + | chr1.4:4866810-4866829 | None:intergenic | 5.0% |
| !!! | TTTTTAATTCAAAAATATTA+TGG | + | chr1.4:4862993-4863012 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTATTATAAGT+TGG | - | chr1.4:4863327-4863346 | MS.gene66451:CDS | 5.0% |
| AAGGAATGCAGCACAGACAC+TGG | + | chr1.4:4866135-4866154 | None:intergenic | 50.0% | |
| AATGGACATGAGCCTTCTCC+TGG | - | chr1.4:4864174-4864193 | MS.gene66451:intron | 50.0% | |
| ACAACCAAGACGTTCCCACT+TGG | + | chr1.4:4867830-4867849 | None:intergenic | 50.0% | |
| AGAATGCTGACAGACCAAGG+TGG | + | chr1.4:4866218-4866237 | None:intergenic | 50.0% | |
| AGGGGACAAGAGACTTGTCT+TGG | - | chr1.4:4867156-4867175 | MS.gene66451:intron | 50.0% | |
| ATGTTGGATGGAGGTTGGAG+TGG | + | chr1.4:4862774-4862793 | None:intergenic | 50.0% | |
| CGAACACGCTGATACTGCTA+AGG | + | chr1.4:4865079-4865098 | None:intergenic | 50.0% | |
| CGACACAAAATCTGCGGCAA+CGG | - | chr1.4:4866163-4866182 | MS.gene66451:CDS | 50.0% | |
| CTGTGGATCCTACAGTCACA+TGG | - | chr1.4:4865972-4865991 | MS.gene66451:CDS | 50.0% | |
| GAGTGGAATGAGTGTACCTC+GGG | + | chr1.4:4862757-4862776 | None:intergenic | 50.0% | |
| GATCCTACAGTCACATGGCT+TGG | - | chr1.4:4865977-4865996 | MS.gene66451:CDS | 50.0% | |
| GCACCAATTTCCCATTCCAC+AGG | + | chr1.4:4864944-4864963 | None:intergenic | 50.0% | |
| GCCAATGACGACCAATGCTT+TGG | + | chr1.4:4867590-4867609 | None:intergenic | 50.0% | |
| GCTCAAGTATGTTCCAGGGA+TGG | - | chr1.4:4864501-4864520 | MS.gene66451:intron | 50.0% | |
| GGAAGAATGCTGACAGACCA+AGG | + | chr1.4:4866221-4866240 | None:intergenic | 50.0% | |
| GGACCTGTGGAATGGGAAAT+TGG | - | chr1.4:4864938-4864957 | MS.gene66451:CDS | 50.0% | |
| GGAGTGGAATGAGTGTACCT+CGG | + | chr1.4:4862758-4862777 | None:intergenic | 50.0% | |
| GGTCATGGTTGAGTCCAAGT+GGG | - | chr1.4:4867813-4867832 | MS.gene66451:CDS | 50.0% | |
| GTCAAGCTAGCACAACAAGC+TGG | - | chr1.4:4864325-4864344 | MS.gene66451:CDS | 50.0% | |
| GTCCCTACGTTTGTGCTGAA+TGG | - | chr1.4:4864371-4864390 | MS.gene66451:CDS | 50.0% | |
| GTTGTGCTTGAAGAATGGGG+AGG | - | chr1.4:4867845-4867864 | MS.gene66451:CDS | 50.0% | |
| TCTGCGGCAACGGTTACATT+TGG | - | chr1.4:4866173-4866192 | MS.gene66451:CDS | 50.0% | |
| TCTTGCTTGCACATGTCCCA+AGG | + | chr1.4:4865028-4865047 | None:intergenic | 50.0% | |
| ! | CGTTCGATGCACACTCCTTT+TGG | - | chr1.4:4866976-4866995 | MS.gene66451:intron | 50.0% |
| ! | GAATGGGAAATTGGTGCTCC+TGG | - | chr1.4:4864947-4864966 | MS.gene66451:CDS | 50.0% |
| ! | GGAAATTGGTGCTCCTGGAA+AGG | - | chr1.4:4864952-4864971 | MS.gene66451:CDS | 50.0% |
| ! | TAGTGTTGCTGTGGGTCTTC+CGG | - | chr1.4:4866941-4866960 | MS.gene66451:intron | 50.0% |
| !! | CACACTCCTTTTGGTTGCTC+TGG | - | chr1.4:4866985-4867004 | MS.gene66451:intron | 50.0% |
| !! | TCTGTTCTGAAAGCCATCCC+TGG | + | chr1.4:4864517-4864536 | None:intergenic | 50.0% |
| CGGGTGTGCTTCTTGGATAG+TGG | + | chr1.4:4862738-4862757 | None:intergenic | 55.0% | |
| CGGTCATGGTTGAGTCCAAG+TGG | - | chr1.4:4867812-4867831 | MS.gene66451:CDS | 55.0% | |
| CTTGGACTCAACCATGACCG+AGG | + | chr1.4:4867812-4867831 | None:intergenic | 55.0% | |
| GAGTCCAAGTGGGAACGTCT+TGG | - | chr1.4:4867823-4867842 | MS.gene66451:CDS | 55.0% | |
| GGAATCGTCGTCACTGGAGT+AGG | + | chr1.4:4866458-4866477 | None:intergenic | 55.0% | |
| GTGCGACCAGAGCAACCAAA+AGG | + | chr1.4:4866994-4867013 | None:intergenic | 55.0% | |
| TGGGCTGCTCAAATGGCTGT+AGG | - | chr1.4:4864986-4865005 | MS.gene66451:CDS | 55.0% | |
| TGTACCTCGGGTGTGCTTCT+TGG | + | chr1.4:4862745-4862764 | None:intergenic | 55.0% | |
| ! | ATGTGCATGTTGGTGCCCGT+TGG | + | chr1.4:4863556-4863575 | None:intergenic | 55.0% |
| ! | CTATCCAAGAAGCACACCCG+AGG | - | chr1.4:4862738-4862757 | MS.gene66451:intron | 55.0% |
| ! | GGACTGAGAATTGGTCTGGC+TGG | - | chr1.4:4865363-4865382 | MS.gene66451:intron | 55.0% |
| ACAACCTTTGACGCGCCGAG+TGG | - | chr1.4:4867504-4867523 | MS.gene66451:intron | 60.0% | |
| GAATGGGGAGGTGACCCTAC+TGG | - | chr1.4:4867857-4867876 | MS.gene66451:CDS | 60.0% | |
| TCGTCGTCACTGGAGTAGGC+AGG | + | chr1.4:4866454-4866473 | None:intergenic | 60.0% | |
| GCCACTGGATCGCTGCCACT+CGG | + | chr1.4:4867522-4867541 | None:intergenic | 65.0% | |
| GCCGAGTGGCAGCGATCCAG+TGG | - | chr1.4:4867518-4867537 | MS.gene66451:intron | 70.0% | |
| GCTGCCACTCGGCGCGTCAA+AGG | + | chr1.4:4867511-4867530 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 4862616 | 4867904 | 4862616 | ID=MS.gene66451 |
| chr1.4 | mRNA | 4862616 | 4867904 | 4862616 | ID=MS.gene66451.t1;Parent=MS.gene66451 |
| chr1.4 | exon | 4867761 | 4867904 | 4867761 | ID=MS.gene66451.t1.exon1;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4867761 | 4867904 | 4867761 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4866320 | 4866415 | 4866320 | ID=MS.gene66451.t1.exon2;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4866320 | 4866415 | 4866320 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4866119 | 4866231 | 4866119 | ID=MS.gene66451.t1.exon3;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4866119 | 4866231 | 4866119 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4865968 | 4866034 | 4865968 | ID=MS.gene66451.t1.exon4;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4865968 | 4866034 | 4865968 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4865757 | 4865849 | 4865757 | ID=MS.gene66451.t1.exon5;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4865757 | 4865849 | 4865757 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4865454 | 4865597 | 4865454 | ID=MS.gene66451.t1.exon6;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4865454 | 4865597 | 4865454 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4865136 | 4865224 | 4865136 | ID=MS.gene66451.t1.exon7;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4865136 | 4865224 | 4865136 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4864928 | 4865033 | 4864928 | ID=MS.gene66451.t1.exon8;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4864928 | 4865033 | 4864928 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4864708 | 4864795 | 4864708 | ID=MS.gene66451.t1.exon9;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4864708 | 4864795 | 4864708 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4864505 | 4864626 | 4864505 | ID=MS.gene66451.t1.exon10;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4864505 | 4864626 | 4864505 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4864246 | 4864410 | 4864246 | ID=MS.gene66451.t1.exon11;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4864246 | 4864410 | 4864246 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4863969 | 4864144 | 4863969 | ID=MS.gene66451.t1.exon12;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4863969 | 4864144 | 4863969 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4863757 | 4863866 | 4863757 | ID=MS.gene66451.t1.exon13;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4863757 | 4863866 | 4863757 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4863558 | 4863667 | 4863558 | ID=MS.gene66451.t1.exon14;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4863558 | 4863667 | 4863558 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4863324 | 4863434 | 4863324 | ID=MS.gene66451.t1.exon15;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4863324 | 4863434 | 4863324 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4863111 | 4863221 | 4863111 | ID=MS.gene66451.t1.exon16;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4863111 | 4863221 | 4863111 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4862811 | 4863016 | 4862811 | ID=MS.gene66451.t1.exon17;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4862811 | 4863016 | 4862811 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| chr1.4 | exon | 4862616 | 4862721 | 4862616 | ID=MS.gene66451.t1.exon18;Parent=MS.gene66451.t1 |
| chr1.4 | CDS | 4862616 | 4862721 | 4862616 | ID=cds.MS.gene66451.t1;Parent=MS.gene66451.t1 |
| Gene Sequence |
| Protein sequence |
