Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005284.t1 | XP_003591185.1 | 94 | 352 | 21 | 0 | 1 | 352 | 1 | 352 | 4.50E-193 | 683.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005284.t1 | Q0WRB2 | 69.4 | 353 | 104 | 2 | 1 | 349 | 1 | 353 | 4.4e-149 | 528.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005284.t1 | Q2HW33 | 94.0 | 352 | 21 | 0 | 1 | 352 | 1 | 352 | 3.2e-193 | 683.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene005284 | MS.gene073336 | PPI |
MS.gene005284 | MS.gene012318 | PPI |
MS.gene005284 | MS.gene96326 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005284.t1 | MTR_1g083690 | 94.034 | 352 | 21 | 0 | 1 | 352 | 1 | 352 | 0.0 | 672 |
MS.gene005284.t1 | MTR_7g112490 | 75.482 | 363 | 78 | 5 | 1 | 352 | 19 | 381 | 0.0 | 575 |
MS.gene005284.t1 | MTR_7g112490 | 75.482 | 363 | 78 | 5 | 1 | 352 | 1 | 363 | 0.0 | 574 |
MS.gene005284.t1 | MTR_2g435550 | 59.664 | 357 | 137 | 2 | 1 | 352 | 1 | 355 | 1.13e-164 | 464 |
MS.gene005284.t1 | MTR_2g435550 | 62.997 | 327 | 121 | 0 | 26 | 352 | 15 | 341 | 1.99e-164 | 463 |
MS.gene005284.t1 | MTR_4g120410 | 58.924 | 353 | 143 | 1 | 1 | 351 | 1 | 353 | 7.06e-163 | 459 |
MS.gene005284.t1 | MTR_2g435550 | 58.929 | 336 | 131 | 2 | 1 | 331 | 1 | 334 | 5.90e-152 | 433 |
MS.gene005284.t1 | MTR_7g080170 | 48.673 | 339 | 147 | 1 | 39 | 350 | 46 | 384 | 3.72e-112 | 336 |
MS.gene005284.t1 | MTR_8g017240 | 50.820 | 305 | 142 | 3 | 48 | 352 | 45 | 341 | 8.97e-106 | 315 |
MS.gene005284.t1 | MTR_4g037470 | 44.282 | 341 | 174 | 5 | 24 | 350 | 32 | 370 | 7.05e-104 | 313 |
MS.gene005284.t1 | MTR_7g021530 | 47.222 | 324 | 151 | 3 | 48 | 352 | 47 | 369 | 1.67e-102 | 308 |
MS.gene005284.t1 | MTR_7g021530 | 47.222 | 324 | 151 | 3 | 48 | 352 | 88 | 410 | 6.83e-102 | 308 |
MS.gene005284.t1 | MTR_2g090190 | 44.248 | 339 | 176 | 3 | 24 | 350 | 26 | 363 | 4.36e-101 | 306 |
MS.gene005284.t1 | MTR_4g037470 | 43.143 | 350 | 174 | 6 | 24 | 350 | 32 | 379 | 6.68e-101 | 306 |
MS.gene005284.t1 | MTR_7g070510 | 44.025 | 318 | 165 | 3 | 45 | 350 | 48 | 364 | 4.40e-98 | 298 |
MS.gene005284.t1 | MTR_4g013295 | 44.728 | 313 | 165 | 4 | 45 | 351 | 34 | 344 | 3.62e-97 | 292 |
MS.gene005284.t1 | MTR_7g021530 | 46.284 | 296 | 139 | 3 | 76 | 352 | 25 | 319 | 1.93e-89 | 273 |
MS.gene005284.t1 | MTR_7g021530 | 47.810 | 274 | 124 | 2 | 48 | 302 | 47 | 320 | 2.94e-86 | 263 |
MS.gene005284.t1 | MTR_7g021530 | 47.810 | 274 | 124 | 2 | 48 | 302 | 88 | 361 | 1.09e-85 | 263 |
MS.gene005284.t1 | MTR_7g080170 | 55.066 | 227 | 99 | 1 | 124 | 350 | 53 | 276 | 3.63e-83 | 258 |
MS.gene005284.t1 | MTR_1g016620 | 44.558 | 294 | 161 | 2 | 58 | 351 | 38 | 329 | 4.87e-79 | 246 |
MS.gene005284.t1 | MTR_7g021530 | 41.969 | 193 | 93 | 2 | 48 | 221 | 47 | 239 | 4.52e-46 | 158 |
MS.gene005284.t1 | MTR_7g021530 | 41.969 | 193 | 93 | 2 | 48 | 221 | 88 | 280 | 1.31e-45 | 158 |
MS.gene005284.t1 | MTR_6g087000 | 30.476 | 315 | 168 | 9 | 60 | 348 | 90 | 379 | 3.81e-33 | 130 |
MS.gene005284.t1 | MTR_6g087000 | 30.476 | 315 | 168 | 9 | 60 | 348 | 90 | 379 | 5.30e-33 | 130 |
MS.gene005284.t1 | MTR_4g118340 | 28.674 | 279 | 158 | 7 | 71 | 331 | 68 | 323 | 9.99e-29 | 115 |
MS.gene005284.t1 | MTR_3g105730 | 32.061 | 262 | 128 | 11 | 91 | 350 | 45 | 258 | 1.82e-27 | 109 |
MS.gene005284.t1 | MTR_2g020970 | 28.691 | 359 | 197 | 14 | 23 | 348 | 7 | 339 | 2.02e-27 | 110 |
MS.gene005284.t1 | MTR_3g105730 | 32.061 | 262 | 128 | 11 | 91 | 350 | 67 | 280 | 2.66e-27 | 109 |
MS.gene005284.t1 | MTR_2g020970 | 29.755 | 326 | 172 | 12 | 23 | 315 | 7 | 308 | 4.20e-27 | 111 |
MS.gene005284.t1 | MTR_1g014640 | 31.679 | 262 | 129 | 12 | 91 | 350 | 110 | 323 | 6.00e-25 | 103 |
MS.gene005284.t1 | MTR_1g013400 | 31.679 | 262 | 129 | 12 | 91 | 350 | 110 | 323 | 6.00e-25 | 103 |
MS.gene005284.t1 | MTR_2g078760 | 36.260 | 262 | 117 | 13 | 89 | 348 | 38 | 251 | 1.22e-24 | 101 |
MS.gene005284.t1 | MTR_8g463130 | 34.892 | 278 | 131 | 14 | 77 | 351 | 24 | 254 | 1.75e-24 | 100 |
MS.gene005284.t1 | MTR_8g463130 | 34.892 | 278 | 131 | 14 | 77 | 351 | 52 | 282 | 1.81e-24 | 101 |
MS.gene005284.t1 | MTR_2g078760 | 36.538 | 260 | 115 | 13 | 91 | 348 | 119 | 330 | 2.97e-24 | 101 |
MS.gene005284.t1 | MTR_5g009370 | 32.342 | 269 | 131 | 9 | 55 | 312 | 52 | 280 | 6.68e-24 | 100 |
MS.gene005284.t1 | MTR_1g115570 | 32.653 | 294 | 149 | 14 | 39 | 327 | 72 | 321 | 3.56e-22 | 96.3 |
MS.gene005284.t1 | MTR_4g094542 | 30.741 | 270 | 130 | 13 | 86 | 350 | 147 | 364 | 1.20e-21 | 95.1 |
MS.gene005284.t1 | MTR_3g068200 | 32.180 | 289 | 166 | 10 | 25 | 310 | 60 | 321 | 3.02e-21 | 94.0 |
MS.gene005284.t1 | MTR_6g081850 | 29.710 | 276 | 138 | 10 | 92 | 350 | 82 | 318 | 4.31e-21 | 92.8 |
MS.gene005284.t1 | MTR_3g104710 | 31.679 | 262 | 131 | 9 | 57 | 309 | 262 | 484 | 4.32e-21 | 94.7 |
MS.gene005284.t1 | MTR_2g008850 | 38.547 | 179 | 86 | 8 | 173 | 350 | 79 | 234 | 1.63e-20 | 89.4 |
MS.gene005284.t1 | MTR_5g080680 | 31.102 | 254 | 132 | 8 | 66 | 310 | 109 | 328 | 1.72e-20 | 92.0 |
MS.gene005284.t1 | MTR_4g125810 | 33.484 | 221 | 119 | 8 | 89 | 309 | 253 | 445 | 3.56e-20 | 92.0 |
MS.gene005284.t1 | MTR_2g008850 | 38.547 | 179 | 86 | 8 | 173 | 350 | 125 | 280 | 5.83e-20 | 89.0 |
MS.gene005284.t1 | MTR_5g063940 | 37.778 | 180 | 86 | 9 | 173 | 350 | 79 | 234 | 2.60e-19 | 86.3 |
MS.gene005284.t1 | MTR_1g050520 | 28.136 | 295 | 165 | 13 | 62 | 350 | 391 | 644 | 2.78e-19 | 89.4 |
MS.gene005284.t1 | MTR_5g063940 | 37.778 | 180 | 86 | 9 | 173 | 350 | 126 | 281 | 4.17e-19 | 86.7 |
MS.gene005284.t1 | MTR_1g015110 | 33.036 | 224 | 122 | 9 | 89 | 309 | 290 | 488 | 8.65e-19 | 87.8 |
MS.gene005284.t1 | MTR_3g074610 | 37.430 | 179 | 88 | 8 | 173 | 350 | 126 | 281 | 1.28e-18 | 85.1 |
MS.gene005284.t1 | MTR_3g464700 | 32.443 | 262 | 133 | 12 | 49 | 309 | 80 | 298 | 1.56e-18 | 85.5 |
MS.gene005284.t1 | MTR_4g094208 | 35.196 | 179 | 92 | 7 | 173 | 350 | 121 | 276 | 9.58e-18 | 82.4 |
MS.gene005284.t1 | MTR_3g464650 | 29.967 | 307 | 158 | 15 | 49 | 348 | 56 | 312 | 1.39e-17 | 82.8 |
MS.gene005284.t1 | MTR_3g091060 | 29.008 | 262 | 138 | 10 | 91 | 351 | 127 | 341 | 2.25e-17 | 82.8 |
MS.gene005284.t1 | MTR_8g102550 | 29.864 | 221 | 123 | 7 | 89 | 309 | 152 | 340 | 3.85e-17 | 82.4 |
MS.gene005284.t1 | MTR_1g028300 | 34.234 | 222 | 110 | 8 | 89 | 310 | 145 | 330 | 6.14e-17 | 81.6 |
MS.gene005284.t1 | MTR_4g116420 | 28.315 | 279 | 147 | 13 | 83 | 352 | 118 | 352 | 2.19e-16 | 80.1 |
MS.gene005284.t1 | MTR_3g107880 | 28.800 | 250 | 128 | 10 | 89 | 328 | 63 | 272 | 8.19e-16 | 77.8 |
MS.gene005284.t1 | MTR_5g071550 | 27.852 | 298 | 172 | 11 | 52 | 348 | 117 | 372 | 1.72e-15 | 77.4 |
MS.gene005284.t1 | MTR_1g086350 | 29.515 | 227 | 123 | 10 | 89 | 310 | 102 | 296 | 1.95e-15 | 77.0 |
MS.gene005284.t1 | MTR_3g107880 | 28.800 | 250 | 128 | 10 | 89 | 328 | 120 | 329 | 2.22e-15 | 77.0 |
MS.gene005284.t1 | MTR_1g086350 | 29.515 | 227 | 123 | 10 | 89 | 310 | 118 | 312 | 2.34e-15 | 77.0 |
MS.gene005284.t1 | MTR_3g107880 | 28.800 | 250 | 128 | 10 | 89 | 328 | 121 | 330 | 2.47e-15 | 76.6 |
MS.gene005284.t1 | MTR_1g086350 | 33.333 | 144 | 73 | 4 | 172 | 310 | 85 | 210 | 1.56e-14 | 73.6 |
MS.gene005284.t1 | MTR_2g078760 | 33.945 | 218 | 101 | 11 | 85 | 300 | 113 | 289 | 1.69e-14 | 73.6 |
MS.gene005284.t1 | MTR_2g040500 | 27.211 | 294 | 153 | 11 | 89 | 348 | 267 | 533 | 1.27e-13 | 72.4 |
MS.gene005284.t1 | MTR_7g090530 | 28.431 | 306 | 154 | 14 | 86 | 350 | 66 | 347 | 1.31e-13 | 72.0 |
MS.gene005284.t1 | MTR_4g007440 | 33.121 | 157 | 76 | 5 | 173 | 318 | 160 | 298 | 3.12e-13 | 70.5 |
MS.gene005284.t1 | MTR_5g024340 | 29.075 | 227 | 114 | 9 | 89 | 310 | 124 | 308 | 9.73e-13 | 68.9 |
MS.gene005284.t1 | MTR_3g105880 | 32.653 | 147 | 73 | 4 | 172 | 310 | 159 | 287 | 1.58e-12 | 67.8 |
MS.gene005284.t1 | MTR_4g123080 | 25.430 | 291 | 166 | 11 | 56 | 328 | 54 | 311 | 1.70e-12 | 68.2 |
MS.gene005284.t1 | MTR_2g033000 | 26.400 | 250 | 141 | 9 | 89 | 328 | 100 | 316 | 1.81e-12 | 68.2 |
MS.gene005284.t1 | MTR_4g119830 | 26.027 | 292 | 141 | 10 | 79 | 343 | 222 | 465 | 1.92e-12 | 68.6 |
MS.gene005284.t1 | MTR_3g105880 | 32.653 | 147 | 73 | 4 | 172 | 310 | 159 | 287 | 2.06e-12 | 67.8 |
MS.gene005284.t1 | MTR_4g123080 | 25.430 | 291 | 166 | 11 | 56 | 328 | 72 | 329 | 2.43e-12 | 67.8 |
MS.gene005284.t1 | MTR_8g074930 | 25.890 | 309 | 152 | 14 | 89 | 352 | 79 | 355 | 8.42e-12 | 66.2 |
MS.gene005284.t1 | MTR_8g074930 | 28.910 | 211 | 97 | 10 | 183 | 352 | 45 | 243 | 1.28e-11 | 64.7 |
MS.gene005284.t1 | MTR_1g067210 | 28.146 | 302 | 152 | 15 | 89 | 351 | 76 | 351 | 1.48e-11 | 65.5 |
MS.gene005284.t1 | MTR_7g029240 | 34.266 | 143 | 83 | 6 | 165 | 304 | 128 | 262 | 1.53e-11 | 65.5 |
MS.gene005284.t1 | MTR_1g014190 | 30.612 | 147 | 76 | 4 | 172 | 310 | 197 | 325 | 1.80e-11 | 65.1 |
MS.gene005284.t1 | MTR_1g014190 | 30.612 | 147 | 76 | 4 | 172 | 310 | 159 | 287 | 2.09e-11 | 64.7 |
MS.gene005284.t1 | MTR_3g032660 | 27.368 | 285 | 155 | 12 | 86 | 345 | 65 | 322 | 2.42e-11 | 65.1 |
MS.gene005284.t1 | MTR_3g032700 | 27.368 | 285 | 155 | 12 | 86 | 345 | 65 | 322 | 3.54e-11 | 64.3 |
MS.gene005284.t1 | MTR_1g116260 | 25.987 | 304 | 158 | 14 | 89 | 352 | 80 | 356 | 4.49e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005284.t1 | AT5G27930 | 69.405 | 353 | 104 | 2 | 1 | 349 | 1 | 353 | 0.0 | 541 |
MS.gene005284.t1 | AT5G27930 | 69.405 | 353 | 104 | 2 | 1 | 349 | 1 | 353 | 0.0 | 541 |
MS.gene005284.t1 | AT3G05640 | 68.169 | 355 | 104 | 2 | 1 | 351 | 1 | 350 | 0.0 | 523 |
MS.gene005284.t1 | AT3G05640 | 68.169 | 355 | 104 | 2 | 1 | 351 | 1 | 350 | 0.0 | 523 |
MS.gene005284.t1 | AT3G05640 | 68.169 | 355 | 104 | 2 | 1 | 351 | 1 | 350 | 0.0 | 523 |
MS.gene005284.t1 | AT5G27930 | 70.100 | 301 | 86 | 2 | 1 | 297 | 1 | 301 | 4.55e-166 | 466 |
MS.gene005284.t1 | AT3G16800 | 54.062 | 357 | 150 | 4 | 1 | 351 | 1 | 349 | 7.30e-138 | 396 |
MS.gene005284.t1 | AT3G16800 | 54.062 | 357 | 150 | 4 | 1 | 351 | 1 | 349 | 7.30e-138 | 396 |
MS.gene005284.t1 | AT3G16800 | 54.062 | 357 | 150 | 4 | 1 | 351 | 1 | 349 | 7.30e-138 | 396 |
MS.gene005284.t1 | AT1G79630 | 45.133 | 339 | 146 | 2 | 53 | 351 | 62 | 400 | 1.87e-106 | 321 |
MS.gene005284.t1 | AT1G79630 | 45.133 | 339 | 146 | 2 | 53 | 351 | 58 | 396 | 2.77e-106 | 320 |
MS.gene005284.t1 | AT3G16800 | 57.471 | 261 | 103 | 2 | 92 | 351 | 1 | 254 | 4.09e-106 | 311 |
MS.gene005284.t1 | AT3G16800 | 57.471 | 261 | 103 | 2 | 92 | 351 | 1 | 254 | 4.09e-106 | 311 |
MS.gene005284.t1 | AT3G02750 | 44.000 | 375 | 167 | 3 | 16 | 352 | 26 | 395 | 1.24e-105 | 318 |
MS.gene005284.t1 | AT3G02750 | 44.000 | 375 | 167 | 3 | 16 | 352 | 26 | 395 | 1.24e-105 | 318 |
MS.gene005284.t1 | AT5G36250 | 46.364 | 330 | 152 | 1 | 48 | 352 | 57 | 386 | 8.11e-105 | 315 |
MS.gene005284.t1 | AT1G16220 | 47.022 | 319 | 149 | 4 | 53 | 351 | 59 | 377 | 2.00e-103 | 313 |
MS.gene005284.t1 | AT5G36250 | 44.767 | 344 | 151 | 2 | 48 | 352 | 57 | 400 | 7.95e-101 | 305 |
MS.gene005284.t1 | AT3G02750 | 40.244 | 410 | 167 | 4 | 16 | 352 | 26 | 430 | 7.34e-98 | 300 |
MS.gene005284.t1 | AT1G03590 | 44.272 | 323 | 164 | 4 | 41 | 350 | 43 | 362 | 1.74e-97 | 297 |
MS.gene005284.t1 | AT4G03415 | 46.711 | 304 | 147 | 3 | 61 | 350 | 70 | 372 | 2.28e-97 | 296 |
MS.gene005284.t1 | AT4G03415 | 46.711 | 304 | 147 | 3 | 61 | 350 | 70 | 372 | 2.28e-97 | 296 |
MS.gene005284.t1 | AT4G03415 | 46.711 | 304 | 147 | 3 | 61 | 350 | 70 | 372 | 2.28e-97 | 296 |
MS.gene005284.t1 | AT1G79630 | 45.048 | 313 | 132 | 2 | 79 | 351 | 18 | 330 | 6.21e-97 | 295 |
MS.gene005284.t1 | AT1G79630 | 45.048 | 313 | 132 | 2 | 79 | 351 | 18 | 330 | 6.21e-97 | 295 |
MS.gene005284.t1 | AT5G01700 | 45.455 | 308 | 164 | 3 | 45 | 351 | 34 | 338 | 6.02e-95 | 288 |
MS.gene005284.t1 | AT5G01700 | 46.713 | 289 | 150 | 3 | 64 | 351 | 4 | 289 | 1.18e-92 | 280 |
MS.gene005284.t1 | AT5G36250 | 47.079 | 291 | 128 | 2 | 48 | 312 | 57 | 347 | 1.75e-89 | 273 |
MS.gene005284.t1 | AT1G79630 | 56.585 | 205 | 89 | 0 | 147 | 351 | 86 | 290 | 1.77e-84 | 261 |
MS.gene005284.t1 | AT1G79630 | 56.585 | 205 | 89 | 0 | 147 | 351 | 86 | 290 | 1.77e-84 | 261 |
MS.gene005284.t1 | AT1G79630 | 56.585 | 205 | 89 | 0 | 147 | 351 | 86 | 290 | 1.77e-84 | 261 |
MS.gene005284.t1 | AT1G79630 | 56.585 | 205 | 89 | 0 | 147 | 351 | 86 | 290 | 1.77e-84 | 261 |
MS.gene005284.t1 | AT4G32950 | 43.686 | 293 | 145 | 4 | 57 | 348 | 41 | 314 | 4.97e-79 | 245 |
MS.gene005284.t1 | AT5G26010 | 43.624 | 298 | 155 | 4 | 56 | 352 | 41 | 326 | 6.51e-78 | 242 |
MS.gene005284.t1 | AT3G16800 | 49.339 | 227 | 101 | 4 | 1 | 221 | 1 | 219 | 2.72e-72 | 224 |
MS.gene005284.t1 | AT4G32950 | 45.455 | 242 | 112 | 4 | 57 | 297 | 41 | 263 | 3.82e-65 | 208 |
MS.gene005284.t1 | AT2G20050 | 30.990 | 313 | 166 | 8 | 60 | 348 | 109 | 395 | 1.08e-34 | 135 |
MS.gene005284.t1 | AT2G20050 | 30.990 | 313 | 166 | 8 | 60 | 348 | 109 | 395 | 1.14e-34 | 135 |
MS.gene005284.t1 | AT3G06270 | 30.662 | 287 | 150 | 9 | 55 | 315 | 46 | 309 | 1.03e-29 | 117 |
MS.gene005284.t1 | AT2G20630 | 34.082 | 267 | 128 | 12 | 86 | 351 | 60 | 279 | 1.80e-27 | 109 |
MS.gene005284.t1 | AT4G31750 | 32.319 | 263 | 130 | 11 | 91 | 352 | 66 | 281 | 3.28e-27 | 109 |
MS.gene005284.t1 | AT4G31750 | 33.080 | 263 | 128 | 12 | 91 | 352 | 66 | 281 | 3.55e-27 | 109 |
MS.gene005284.t1 | AT4G31750 | 33.080 | 263 | 128 | 12 | 91 | 352 | 66 | 281 | 3.55e-27 | 109 |
MS.gene005284.t1 | AT2G20630 | 34.211 | 266 | 127 | 12 | 86 | 350 | 60 | 278 | 1.73e-26 | 107 |
MS.gene005284.t1 | AT4G28400 | 34.866 | 261 | 122 | 13 | 92 | 351 | 48 | 261 | 1.14e-25 | 104 |
MS.gene005284.t1 | AT4G28400 | 34.866 | 261 | 122 | 13 | 92 | 351 | 70 | 283 | 1.54e-25 | 104 |
MS.gene005284.t1 | AT5G10740 | 31.818 | 264 | 130 | 10 | 89 | 350 | 64 | 279 | 3.10e-24 | 102 |
MS.gene005284.t1 | AT5G10740 | 31.818 | 264 | 130 | 10 | 89 | 350 | 64 | 279 | 3.10e-24 | 102 |
MS.gene005284.t1 | AT5G24940 | 31.418 | 261 | 131 | 10 | 91 | 350 | 66 | 279 | 2.07e-23 | 100 |
MS.gene005284.t1 | AT5G59220 | 34.188 | 234 | 103 | 8 | 89 | 310 | 148 | 342 | 1.75e-22 | 97.8 |
MS.gene005284.t1 | AT1G07430 | 32.099 | 243 | 115 | 8 | 89 | 318 | 157 | 362 | 1.87e-21 | 95.1 |
MS.gene005284.t1 | AT1G43900 | 31.439 | 264 | 132 | 12 | 89 | 351 | 154 | 369 | 1.30e-20 | 92.0 |
MS.gene005284.t1 | AT3G11410 | 32.766 | 235 | 122 | 8 | 85 | 309 | 133 | 341 | 2.55e-20 | 91.7 |
MS.gene005284.t1 | AT1G78200 | 29.927 | 274 | 146 | 11 | 78 | 350 | 9 | 237 | 1.80e-19 | 86.7 |
MS.gene005284.t1 | AT1G78200 | 29.927 | 274 | 146 | 11 | 78 | 350 | 9 | 237 | 1.80e-19 | 86.7 |
MS.gene005284.t1 | AT1G78200 | 29.927 | 274 | 146 | 11 | 78 | 350 | 54 | 282 | 2.34e-19 | 87.4 |
MS.gene005284.t1 | AT1G78200 | 29.927 | 274 | 146 | 11 | 78 | 350 | 54 | 282 | 2.34e-19 | 87.4 |
MS.gene005284.t1 | AT1G78200 | 29.927 | 274 | 146 | 11 | 78 | 350 | 54 | 282 | 2.34e-19 | 87.4 |
MS.gene005284.t1 | AT2G29380 | 33.094 | 278 | 129 | 13 | 51 | 309 | 70 | 309 | 2.45e-19 | 88.6 |
MS.gene005284.t1 | AT5G53140 | 28.374 | 289 | 159 | 9 | 63 | 350 | 106 | 347 | 3.81e-19 | 88.6 |
MS.gene005284.t1 | AT5G53140 | 28.374 | 289 | 159 | 9 | 63 | 350 | 106 | 347 | 3.81e-19 | 88.6 |
MS.gene005284.t1 | AT5G57050 | 32.579 | 221 | 120 | 7 | 89 | 309 | 120 | 311 | 4.15e-19 | 87.8 |
MS.gene005284.t1 | AT5G57050 | 32.579 | 221 | 120 | 7 | 89 | 309 | 160 | 351 | 5.20e-19 | 88.2 |
MS.gene005284.t1 | AT1G34750 | 38.202 | 178 | 84 | 8 | 173 | 348 | 126 | 279 | 1.15e-18 | 85.1 |
MS.gene005284.t1 | AT1G34750 | 38.202 | 178 | 84 | 8 | 173 | 348 | 126 | 279 | 1.15e-18 | 85.1 |
MS.gene005284.t1 | AT1G34750 | 38.202 | 178 | 84 | 8 | 173 | 348 | 126 | 279 | 1.15e-18 | 85.1 |
MS.gene005284.t1 | AT3G15260 | 37.778 | 180 | 88 | 8 | 173 | 351 | 133 | 289 | 2.16e-18 | 84.7 |
MS.gene005284.t1 | AT3G15260 | 37.778 | 180 | 88 | 8 | 173 | 351 | 133 | 289 | 2.16e-18 | 84.7 |
MS.gene005284.t1 | AT3G17250 | 27.636 | 275 | 155 | 8 | 87 | 352 | 156 | 395 | 3.15e-18 | 85.9 |
MS.gene005284.t1 | AT1G67820 | 30.739 | 257 | 138 | 9 | 54 | 310 | 81 | 297 | 6.41e-18 | 84.7 |
MS.gene005284.t1 | AT4G26080 | 32.314 | 229 | 124 | 7 | 81 | 309 | 164 | 361 | 7.02e-18 | 84.7 |
MS.gene005284.t1 | AT1G67820 | 30.739 | 257 | 138 | 9 | 54 | 310 | 117 | 333 | 1.29e-17 | 84.0 |
MS.gene005284.t1 | AT1G48040 | 29.670 | 273 | 146 | 10 | 89 | 352 | 116 | 351 | 2.26e-17 | 82.8 |
MS.gene005284.t1 | AT5G51760 | 32.210 | 267 | 151 | 8 | 48 | 309 | 80 | 321 | 2.42e-17 | 82.8 |
MS.gene005284.t1 | AT5G51760 | 32.210 | 267 | 151 | 8 | 48 | 309 | 110 | 351 | 3.53e-17 | 82.4 |
MS.gene005284.t1 | AT1G22280 | 33.636 | 220 | 119 | 9 | 133 | 350 | 92 | 286 | 4.14e-17 | 80.9 |
MS.gene005284.t1 | AT2G34740 | 36.313 | 179 | 91 | 7 | 173 | 350 | 178 | 334 | 4.18e-17 | 81.6 |
MS.gene005284.t1 | AT1G72770 | 30.769 | 234 | 124 | 8 | 89 | 309 | 238 | 446 | 5.11e-17 | 82.4 |
MS.gene005284.t1 | AT1G72770 | 30.769 | 234 | 124 | 8 | 89 | 309 | 238 | 446 | 5.11e-17 | 82.4 |
MS.gene005284.t1 | AT1G72770 | 30.769 | 234 | 124 | 8 | 89 | 309 | 238 | 446 | 5.11e-17 | 82.4 |
MS.gene005284.t1 | AT1G07160 | 28.966 | 290 | 166 | 12 | 60 | 348 | 124 | 374 | 7.19e-17 | 81.3 |
MS.gene005284.t1 | AT2G25620 | 28.467 | 274 | 135 | 12 | 89 | 348 | 128 | 354 | 1.11e-16 | 80.9 |
MS.gene005284.t1 | AT2G25620 | 28.467 | 274 | 135 | 12 | 89 | 348 | 128 | 354 | 1.11e-16 | 80.9 |
MS.gene005284.t1 | AT3G62260 | 30.000 | 270 | 148 | 13 | 89 | 352 | 27 | 261 | 1.76e-16 | 79.3 |
MS.gene005284.t1 | AT2G30020 | 30.034 | 293 | 158 | 13 | 60 | 348 | 141 | 390 | 2.02e-16 | 80.1 |
MS.gene005284.t1 | AT3G62260 | 28.571 | 308 | 175 | 14 | 55 | 352 | 79 | 351 | 4.86e-16 | 79.0 |
MS.gene005284.t1 | AT3G62260 | 28.247 | 308 | 176 | 13 | 55 | 352 | 78 | 350 | 5.46e-16 | 79.0 |
MS.gene005284.t1 | AT1G22280 | 36.111 | 180 | 89 | 8 | 173 | 350 | 125 | 280 | 5.57e-16 | 77.8 |
MS.gene005284.t1 | AT2G40180 | 27.517 | 298 | 171 | 12 | 56 | 348 | 126 | 383 | 8.89e-16 | 78.2 |
MS.gene005284.t1 | AT1G17550 | 29.487 | 234 | 126 | 7 | 89 | 308 | 237 | 445 | 1.78e-15 | 77.8 |
MS.gene005284.t1 | AT1G17550 | 29.487 | 234 | 126 | 7 | 89 | 308 | 237 | 445 | 1.78e-15 | 77.8 |
MS.gene005284.t1 | AT1G18030 | 28.467 | 274 | 144 | 9 | 92 | 350 | 112 | 348 | 2.55e-15 | 76.6 |
MS.gene005284.t1 | AT4G28400 | 32.857 | 210 | 100 | 11 | 92 | 300 | 70 | 239 | 2.02e-14 | 72.8 |
MS.gene005284.t1 | AT2G33700 | 28.205 | 273 | 134 | 11 | 89 | 350 | 123 | 344 | 4.05e-14 | 73.2 |
MS.gene005284.t1 | AT3G55050 | 26.774 | 310 | 154 | 15 | 86 | 352 | 81 | 360 | 5.97e-14 | 72.8 |
MS.gene005284.t1 | AT3G55050 | 26.774 | 310 | 154 | 15 | 86 | 352 | 81 | 360 | 5.97e-14 | 72.8 |
MS.gene005284.t1 | AT3G51370 | 27.243 | 301 | 154 | 13 | 89 | 350 | 79 | 353 | 1.36e-13 | 71.6 |
MS.gene005284.t1 | AT3G51370 | 27.243 | 301 | 154 | 13 | 89 | 350 | 79 | 353 | 1.36e-13 | 71.6 |
MS.gene005284.t1 | AT3G51370 | 28.986 | 207 | 98 | 8 | 183 | 350 | 72 | 268 | 1.45e-13 | 70.9 |
MS.gene005284.t1 | AT2G34740 | 36.913 | 149 | 77 | 6 | 173 | 319 | 192 | 325 | 1.57e-13 | 70.9 |
MS.gene005284.t1 | AT2G40860 | 25.000 | 296 | 172 | 11 | 62 | 350 | 298 | 550 | 1.75e-13 | 72.0 |
MS.gene005284.t1 | AT4G38520 | 28.239 | 301 | 151 | 14 | 89 | 350 | 81 | 355 | 1.98e-13 | 71.2 |
MS.gene005284.t1 | AT4G38520 | 28.239 | 301 | 151 | 14 | 89 | 350 | 81 | 355 | 1.98e-13 | 71.2 |
MS.gene005284.t1 | AT2G34740 | 36.913 | 149 | 77 | 6 | 173 | 319 | 174 | 307 | 2.01e-13 | 70.5 |
MS.gene005284.t1 | AT2G40860 | 25.000 | 296 | 172 | 11 | 62 | 350 | 396 | 648 | 2.01e-13 | 71.6 |
MS.gene005284.t1 | AT3G17090 | 26.333 | 300 | 158 | 12 | 89 | 350 | 84 | 358 | 5.68e-13 | 69.7 |
MS.gene005284.t1 | AT5G02760 | 26.908 | 249 | 132 | 10 | 89 | 313 | 72 | 294 | 1.07e-12 | 68.9 |
MS.gene005284.t1 | AT3G51470 | 26.374 | 273 | 141 | 9 | 79 | 333 | 43 | 273 | 1.71e-12 | 67.8 |
MS.gene005284.t1 | AT2G40860 | 24.907 | 269 | 159 | 9 | 62 | 323 | 396 | 628 | 1.82e-12 | 68.9 |
MS.gene005284.t1 | AT5G06750 | 26.299 | 308 | 153 | 13 | 88 | 350 | 81 | 359 | 2.08e-12 | 68.2 |
MS.gene005284.t1 | AT5G06750 | 26.299 | 308 | 153 | 13 | 88 | 350 | 81 | 359 | 2.08e-12 | 68.2 |
MS.gene005284.t1 | AT3G51470 | 26.829 | 246 | 124 | 8 | 79 | 310 | 87 | 290 | 2.51e-12 | 67.8 |
MS.gene005284.t1 | AT3G12620 | 25.714 | 315 | 161 | 13 | 81 | 352 | 75 | 359 | 5.46e-12 | 67.0 |
MS.gene005284.t1 | AT3G12620 | 25.714 | 315 | 161 | 13 | 81 | 352 | 75 | 359 | 5.46e-12 | 67.0 |
MS.gene005284.t1 | AT1G34750 | 40.000 | 130 | 59 | 7 | 173 | 300 | 126 | 238 | 1.03e-11 | 64.7 |
MS.gene005284.t1 | AT1G18030 | 28.571 | 224 | 110 | 7 | 92 | 300 | 112 | 300 | 1.09e-11 | 65.5 |
MS.gene005284.t1 | AT3G16560 | 28.302 | 212 | 118 | 8 | 157 | 346 | 262 | 461 | 2.77e-11 | 65.1 |
MS.gene005284.t1 | AT3G16560 | 28.302 | 212 | 118 | 8 | 157 | 346 | 262 | 461 | 2.77e-11 | 65.1 |
MS.gene005284.t1 | AT3G16560 | 28.302 | 212 | 118 | 8 | 157 | 346 | 262 | 461 | 2.77e-11 | 65.1 |
MS.gene005284.t1 | AT5G66080 | 28.774 | 212 | 103 | 9 | 177 | 350 | 51 | 252 | 3.73e-11 | 63.5 |
MS.gene005284.t1 | AT5G66080 | 28.774 | 212 | 103 | 9 | 177 | 350 | 155 | 356 | 4.89e-11 | 63.9 |
MS.gene005284.t1 | AT5G06750 | 29.767 | 215 | 100 | 8 | 177 | 350 | 73 | 277 | 5.24e-11 | 63.5 |
Find 68 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTCCTTTCTTGCCTCTTT+TGG | 0.160489 | 1.1:-61967511 | None:intergenic |
TCTGTCTTTAAATCGATTTC+TGG | 0.179343 | 1.1:-61968267 | None:intergenic |
AAATCTATTGTTAGCTGAAT+TGG | 0.199406 | 1.1:-61968730 | None:intergenic |
GCAAGACTAACGAGGTAAAT+TGG | 0.202264 | 1.1:-61968758 | None:intergenic |
AACATCAGATGATGGAAATT+TGG | 0.207580 | 1.1:+61968705 | MS.gene005284:CDS |
TGATGTTGATTATAGGAATT+TGG | 0.225413 | 1.1:+61968102 | MS.gene005284:intron |
CTAGCAATGTCGAGGGCTTT+TGG | 0.289925 | 1.1:+61968975 | MS.gene005284:CDS |
GACTATTGTATGAAAGATTA+TGG | 0.301816 | 1.1:+61968999 | MS.gene005284:CDS |
TTCATCTATGTTCAATGGAT+TGG | 0.374832 | 1.1:+61967335 | MS.gene005284:CDS |
TCTGGCATCGTTAATGTTGA+TGG | 0.389237 | 1.1:+61967462 | MS.gene005284:CDS |
GGTGCACCGTGTGTGGTTGC+CGG | 0.401098 | 1.1:+61968935 | MS.gene005284:CDS |
AACAAGTTCATCTAAACGTT+TGG | 0.410687 | 1.1:+61969302 | MS.gene005284:CDS |
CAAGACTAACGAGGTAAATT+GGG | 0.423504 | 1.1:-61968757 | None:intergenic |
TTCTCCAAAAGAGGCAAGAA+AGG | 0.423806 | 1.1:+61967507 | MS.gene005284:CDS |
CCCACACCAAGCAACAATCT+TGG | 0.426077 | 1.1:-61967536 | None:intergenic |
CATCAGCTTTGCTATGCAAC+TGG | 0.434745 | 1.1:+61968214 | MS.gene005284:CDS |
ATATTCCTTTGTGTTACCTC+AGG | 0.439514 | 1.1:-61969035 | None:intergenic |
TGCTGAAGCATTGGCAAAAG+AGG | 0.443328 | 1.1:+61967410 | MS.gene005284:CDS |
CCGTGTGTGGTTGCCGGATG+AGG | 0.459781 | 1.1:+61968941 | MS.gene005284:CDS |
GTTGCCGGATGAGGAGTCTC+CGG | 0.461781 | 1.1:+61968950 | MS.gene005284:CDS |
CACTGGCTAGCACAACAAAC+TGG | 0.472903 | 1.1:-61969070 | None:intergenic |
GCACCTCAGGCTCGTCATCT+AGG | 0.481128 | 1.1:-61968917 | None:intergenic |
CACAGAAGATCATGTCCTCT+TGG | 0.485370 | 1.1:-61968128 | None:intergenic |
AACAAGATCGGTTTAATATG+TGG | 0.489713 | 1.1:+61968295 | MS.gene005284:CDS |
GGCAGTGTCAATTGTTAGAC+AGG | 0.490348 | 1.1:+61968404 | MS.gene005284:CDS |
TTTGTTGTGCTAGCCAGTGA+TGG | 0.493636 | 1.1:+61969074 | MS.gene005284:CDS |
CACTCCTTGATCAATAGCTC+TGG | 0.494278 | 1.1:+61967444 | MS.gene005284:CDS |
AACCACACACGGTGCACCTC+AGG | 0.495315 | 1.1:-61968930 | None:intergenic |
TTGTTGTGCTAGCCAGTGAT+GGG | 0.495608 | 1.1:+61969075 | MS.gene005284:CDS |
TTGCCGGATGAGGAGTCTCC+GGG | 0.504338 | 1.1:+61968951 | MS.gene005284:CDS |
ACCAAGATTGTTGCTTGGTG+TGG | 0.512264 | 1.1:+61967535 | MS.gene005284:CDS |
AGCTTTGCTATGCAACTGGC+AGG | 0.516554 | 1.1:+61968218 | MS.gene005284:CDS |
CTCATTGTGATTGCAAATGT+TGG | 0.523646 | 1.1:+61968658 | MS.gene005284:CDS |
GAGAGAAGCTGCTGAAGCAT+TGG | 0.524056 | 1.1:+61967401 | MS.gene005284:CDS |
GCCCTCGACATTGCTAGTCC+CGG | 0.528664 | 1.1:-61968969 | None:intergenic |
AAGTCATTGAAAATGAAGAA+TGG | 0.531733 | 1.1:+61967360 | MS.gene005284:CDS |
AAGTTCATCTAAACGTTTGG+TGG | 0.532257 | 1.1:+61969305 | MS.gene005284:CDS |
TTAGCTACAACATCAGATGA+TGG | 0.541249 | 1.1:+61968697 | MS.gene005284:CDS |
CTAGGCAGAACACTCGCCCT+TGG | 0.547903 | 1.1:-61968899 | None:intergenic |
GAGAGAATACTTGACTGCCA+AGG | 0.560008 | 1.1:+61968882 | MS.gene005284:CDS |
AGTTAACCAAGATTGTTGCT+TGG | 0.560378 | 1.1:+61967530 | MS.gene005284:CDS |
ATGGAAAGATTAAATGCAGT+GGG | 0.561570 | 1.1:+61967379 | MS.gene005284:CDS |
CAAGAGGACATGATCTTCTG+TGG | 0.563305 | 1.1:+61968129 | MS.gene005284:CDS |
CCTCATCCGGCAACCACACA+CGG | 0.573778 | 1.1:-61968941 | None:intergenic |
GATGCCAGAGCTATTGATCA+AGG | 0.573923 | 1.1:-61967448 | None:intergenic |
TGGTCTTATTTCAGTACCTG+AGG | 0.580296 | 1.1:+61969019 | MS.gene005284:CDS |
AGCCTGAGGTGCACCGTGTG+TGG | 0.584226 | 1.1:+61968928 | MS.gene005284:CDS |
AGTCCCGGAGACTCCTCATC+CGG | 0.587218 | 1.1:-61968954 | None:intergenic |
CTCCGGGACTAGCAATGTCG+AGG | 0.592917 | 1.1:+61968967 | MS.gene005284:CDS |
TTTGATGGACATGGACCTTG+GGG | 0.595119 | 1.1:+61968156 | MS.gene005284:CDS |
AATGGAAAGATTAAATGCAG+TGG | 0.596921 | 1.1:+61967378 | MS.gene005284:CDS |
AGAGAATACTTGACTGCCAA+GGG | 0.600677 | 1.1:+61968883 | MS.gene005284:CDS |
CCAAGATTGTTGCTTGGTGT+GGG | 0.603725 | 1.1:+61967536 | MS.gene005284:CDS |
TGGAGTGTGCAATGCATGCA+TGG | 0.603821 | 1.1:+61969325 | MS.gene005284:CDS |
TGGTTCAAACAACTTTGCCT+CGG | 0.604815 | 1.1:+61967482 | MS.gene005284:CDS |
TTCAATCGATCGAGAACTAG+AGG | 0.607539 | 1.1:+61968344 | MS.gene005284:CDS |
ACAACACTATACCCCATCAC+TGG | 0.610864 | 1.1:-61969087 | None:intergenic |
CAGTTGCATAGCAAAGCTGA+TGG | 0.621326 | 1.1:-61968213 | None:intergenic |
GATCTCTAATCAAGAAGCAG+TGG | 0.623241 | 1.1:+61969254 | MS.gene005284:CDS |
CTTGATACATAGTGACCCCA+AGG | 0.628186 | 1.1:-61968171 | None:intergenic |
AAGAGGACATGATCTTCTGT+GGG | 0.632257 | 1.1:+61968130 | MS.gene005284:CDS |
CTGCCTAGATGACGAGCCTG+AGG | 0.637583 | 1.1:+61968914 | MS.gene005284:CDS |
TGCATGCATGGAAATGCAAG+AGG | 0.655697 | 1.1:+61969337 | MS.gene005284:CDS |
TGTTGTGCTAGCCAGTGATG+GGG | 0.661746 | 1.1:+61969076 | MS.gene005284:CDS |
GCATGGAAATGCAAGAGGAG+AGG | 0.663602 | 1.1:+61969342 | MS.gene005284:CDS |
ATAGGAATTTGGATGCCAAG+AGG | 0.678718 | 1.1:+61968113 | MS.gene005284:intron |
TCCGGGACTAGCAATGTCGA+GGG | 0.678857 | 1.1:+61968968 | MS.gene005284:CDS |
CAGTACCTGAGGTAACACAA+AGG | 0.744058 | 1.1:+61969030 | MS.gene005284:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTCAAAAATATTAATCTT+TGG | + | chr1.1:61968524-61968543 | MS.gene005284:intron | 15.0% |
!! | AATAAAAGAATATTCTCTAA+TGG | - | chr1.1:61968058-61968077 | None:intergenic | 15.0% |
!! | AAAATATGAAACTAAATCGT+CGG | - | chr1.1:61968479-61968498 | None:intergenic | 20.0% |
!! | AGCAAAGCAAATAAAAAAAA+AGG | - | chr1.1:61968581-61968600 | None:intergenic | 20.0% |
!! | GAAGATGAAAATTAAGATAA+AGG | - | chr1.1:61968550-61968569 | None:intergenic | 20.0% |
!!! | AATTTGTTGATGTTGATTAT+AGG | + | chr1.1:61968095-61968114 | MS.gene005284:intron | 20.0% |
!!! | CCTTTGAAATAGTAAAAATA+GGG | + | chr1.1:61969110-61969129 | MS.gene005284:intron | 20.0% |
!!! | GCTGAATTTTTATATGTAAT+TGG | + | chr1.1:61969200-61969219 | MS.gene005284:intron | 20.0% |
!!! | TATGTTTTCATAAACTATCT+TGG | - | chr1.1:61967716-61967735 | None:intergenic | 20.0% |
!!! | TCCTTTGAAATAGTAAAAAT+AGG | + | chr1.1:61969109-61969128 | MS.gene005284:intron | 20.0% |
! | AAATCTATTGTTAGCTGAAT+TGG | - | chr1.1:61968733-61968752 | None:intergenic | 25.0% |
! | AAGTCATTGAAAATGAAGAA+TGG | + | chr1.1:61967360-61967379 | MS.gene005284:CDS | 25.0% |
! | ATAACAACTATTAACCTGTT+TGG | + | chr1.1:61967735-61967754 | MS.gene005284:intron | 25.0% |
! | CATAAGTGGTTATGTATAAA+CGG | - | chr1.1:61968022-61968041 | None:intergenic | 25.0% |
! | GACTATTGTATGAAAGATTA+TGG | + | chr1.1:61968999-61969018 | MS.gene005284:CDS | 25.0% |
! | TACATGTGTTATATAGGTTT+GGG | + | chr1.1:61969227-61969246 | MS.gene005284:intron | 25.0% |
! | TTAAATAAGTCAATCCAAAC+AGG | - | chr1.1:61967752-61967771 | None:intergenic | 25.0% |
! | TTACATGTGTTATATAGGTT+TGG | + | chr1.1:61969226-61969245 | MS.gene005284:intron | 25.0% |
! | TTAGACAGGTAAAACATAAA+AGG | + | chr1.1:61968418-61968437 | MS.gene005284:intron | 25.0% |
!! | CATTTTTCATCTATGTTCAA+TGG | + | chr1.1:61967330-61967349 | MS.gene005284:CDS | 25.0% |
!! | GGTTTTTACATGTGTTATAT+AGG | + | chr1.1:61969221-61969240 | MS.gene005284:intron | 25.0% |
!! | TACAGAATCATGATAAGTTT+TGG | - | chr1.1:61968624-61968643 | None:intergenic | 25.0% |
!! | TGATGTTGATTATAGGAATT+TGG | + | chr1.1:61968102-61968121 | MS.gene005284:intron | 25.0% |
!!! | CCCTATTTTTACTATTTCAA+AGG | - | chr1.1:61969113-61969132 | None:intergenic | 25.0% |
AACAAGTTCATCTAAACGTT+TGG | + | chr1.1:61969302-61969321 | MS.gene005284:CDS | 30.0% | |
AATGGAAAGATTAAATGCAG+TGG | + | chr1.1:61967378-61967397 | MS.gene005284:CDS | 30.0% | |
AGACAGAGAAAAAACAAGAT+CGG | + | chr1.1:61968283-61968302 | MS.gene005284:CDS | 30.0% | |
ATCATGATTCTGTAATGAAC+AGG | + | chr1.1:61968630-61968649 | MS.gene005284:intron | 30.0% | |
ATGGAAAGATTAAATGCAGT+GGG | + | chr1.1:61967379-61967398 | MS.gene005284:CDS | 30.0% | |
CGCTTAATTAATCTTCAAAC+AGG | + | chr1.1:61967995-61968014 | MS.gene005284:intron | 30.0% | |
TCATGATTCTGTAATGAACA+GGG | + | chr1.1:61968631-61968650 | MS.gene005284:intron | 30.0% | |
TCTTCTACAAACATTGTATC+AGG | - | chr1.1:61968858-61968877 | None:intergenic | 30.0% | |
TTCATCTATGTTCAATGGAT+TGG | + | chr1.1:61967335-61967354 | MS.gene005284:CDS | 30.0% | |
TTGGAAAGCTTACGAAAATA+AGG | - | chr1.1:61967697-61967716 | None:intergenic | 30.0% | |
! | AACAAGATCGGTTTAATATG+TGG | + | chr1.1:61968295-61968314 | MS.gene005284:CDS | 30.0% |
! | TCTGTCTTTAAATCGATTTC+TGG | - | chr1.1:61968270-61968289 | None:intergenic | 30.0% |
!! | AACATCAGATGATGGAAATT+TGG | + | chr1.1:61968705-61968724 | MS.gene005284:CDS | 30.0% |
!! | CTTATTTTCATATGCTCTCT+AGG | + | chr1.1:61967858-61967877 | MS.gene005284:intron | 30.0% |
!!! | AAGATTGATTCGTTTTTCAG+TGG | + | chr1.1:61968375-61968394 | MS.gene005284:CDS | 30.0% |
AAGTTCATCTAAACGTTTGG+TGG | + | chr1.1:61969305-61969324 | MS.gene005284:CDS | 35.0% | |
AGTTAACCAAGATTGTTGCT+TGG | + | chr1.1:61967530-61967549 | MS.gene005284:CDS | 35.0% | |
ATATTCCTTTGTGTTACCTC+AGG | - | chr1.1:61969038-61969057 | None:intergenic | 35.0% | |
CAAGACTAACGAGGTAAATT+GGG | - | chr1.1:61968760-61968779 | None:intergenic | 35.0% | |
CTCATTGTGATTGCAAATGT+TGG | + | chr1.1:61968658-61968677 | MS.gene005284:CDS | 35.0% | |
TGTTGTATTAGAGTTGCACA+TGG | - | chr1.1:61968809-61968828 | None:intergenic | 35.0% | |
TTAGCTACAACATCAGATGA+TGG | + | chr1.1:61968697-61968716 | MS.gene005284:CDS | 35.0% | |
! | ATCTTCTGTGGGATTTTTGA+TGG | + | chr1.1:61968141-61968160 | MS.gene005284:CDS | 35.0% |
! | GTTTTCTCATTGCACATAAG+TGG | - | chr1.1:61968036-61968055 | None:intergenic | 35.0% |
! | TCTCCCAAATAGTCTTAGAA+GGG | - | chr1.1:61967635-61967654 | None:intergenic | 35.0% |
!! | AAGCCCTTCTAAGACTATTT+GGG | + | chr1.1:61967629-61967648 | MS.gene005284:intron | 35.0% |
!! | TAAGCCCTTCTAAGACTATT+TGG | + | chr1.1:61967628-61967647 | MS.gene005284:intron | 35.0% |
AAGAGGACATGATCTTCTGT+GGG | + | chr1.1:61968130-61968149 | MS.gene005284:CDS | 40.0% | |
AAGCACATGCGAGATTGTTT+AGG | + | chr1.1:61967787-61967806 | MS.gene005284:intron | 40.0% | |
AGACTATTTGGGAGAGCTTA+TGG | + | chr1.1:61967640-61967659 | MS.gene005284:intron | 40.0% | |
AGAGAATACTTGACTGCCAA+GGG | + | chr1.1:61968883-61968902 | MS.gene005284:CDS | 40.0% | |
ATAGGAATTTGGATGCCAAG+AGG | + | chr1.1:61968113-61968132 | MS.gene005284:intron | 40.0% | |
GATCTCTAATCAAGAAGCAG+TGG | + | chr1.1:61969254-61969273 | MS.gene005284:CDS | 40.0% | |
GCAAGACTAACGAGGTAAAT+TGG | - | chr1.1:61968761-61968780 | None:intergenic | 40.0% | |
TCTGGCATCGTTAATGTTGA+TGG | + | chr1.1:61967462-61967481 | MS.gene005284:CDS | 40.0% | |
TGGTTCAAACAACTTTGCCT+CGG | + | chr1.1:61967482-61967501 | MS.gene005284:CDS | 40.0% | |
TTCAATCGATCGAGAACTAG+AGG | + | chr1.1:61968344-61968363 | MS.gene005284:CDS | 40.0% | |
TTCTCCAAAAGAGGCAAGAA+AGG | + | chr1.1:61967507-61967526 | MS.gene005284:CDS | 40.0% | |
! | AACTCCTTTCTTGCCTCTTT+TGG | - | chr1.1:61967514-61967533 | None:intergenic | 40.0% |
! | CTCTCCCAAATAGTCTTAGA+AGG | - | chr1.1:61967636-61967655 | None:intergenic | 40.0% |
!! | TGGTCTTATTTCAGTACCTG+AGG | + | chr1.1:61969019-61969038 | MS.gene005284:CDS | 40.0% |
!! | TGTGGGATTTTTGATGGACA+TGG | + | chr1.1:61968147-61968166 | MS.gene005284:CDS | 40.0% |
!! | TTCGTTTTTCAGTGGAACGA+CGG | + | chr1.1:61968383-61968402 | MS.gene005284:CDS | 40.0% |
!! | TTTTGATGGACATGGACCTT+GGG | + | chr1.1:61968155-61968174 | MS.gene005284:CDS | 40.0% |
!! | TTTTTGATGGACATGGACCT+TGG | + | chr1.1:61968154-61968173 | MS.gene005284:CDS | 40.0% |
AATAGCGAGCAAGACTAACG+AGG | - | chr1.1:61968769-61968788 | None:intergenic | 45.0% | |
ACAACACTATACCCCATCAC+TGG | - | chr1.1:61969090-61969109 | None:intergenic | 45.0% | |
CAAGAGGACATGATCTTCTG+TGG | + | chr1.1:61968129-61968148 | MS.gene005284:CDS | 45.0% | |
CACAGAAGATCATGTCCTCT+TGG | - | chr1.1:61968131-61968150 | None:intergenic | 45.0% | |
CACTCCTTGATCAATAGCTC+TGG | + | chr1.1:61967444-61967463 | MS.gene005284:CDS | 45.0% | |
CAGTACCTGAGGTAACACAA+AGG | + | chr1.1:61969030-61969049 | MS.gene005284:CDS | 45.0% | |
CAGTTGCATAGCAAAGCTGA+TGG | - | chr1.1:61968216-61968235 | None:intergenic | 45.0% | |
CTTGATACATAGTGACCCCA+AGG | - | chr1.1:61968174-61968193 | None:intergenic | 45.0% | |
GAGAGAATACTTGACTGCCA+AGG | + | chr1.1:61968882-61968901 | MS.gene005284:CDS | 45.0% | |
GATGCCAGAGCTATTGATCA+AGG | - | chr1.1:61967451-61967470 | None:intergenic | 45.0% | |
GGCAGTGTCAATTGTTAGAC+AGG | + | chr1.1:61968404-61968423 | MS.gene005284:CDS | 45.0% | |
TGCATGCATGGAAATGCAAG+AGG | + | chr1.1:61969337-61969356 | MS.gene005284:CDS | 45.0% | |
TTGTTGTGCTAGCCAGTGAT+GGG | + | chr1.1:61969075-61969094 | MS.gene005284:CDS | 45.0% | |
! | ACCAAGATTGTTGCTTGGTG+TGG | + | chr1.1:61967535-61967554 | MS.gene005284:CDS | 45.0% |
! | CAAGAGGAGAGGTTTTGCTA+TGG | + | chr1.1:61969353-61969372 | MS.gene005284:CDS | 45.0% |
! | CATCAGCTTTGCTATGCAAC+TGG | + | chr1.1:61968214-61968233 | MS.gene005284:CDS | 45.0% |
! | TTTGATGGACATGGACCTTG+GGG | + | chr1.1:61968156-61968175 | MS.gene005284:CDS | 45.0% |
! | TTTGTTGTGCTAGCCAGTGA+TGG | + | chr1.1:61969074-61969093 | MS.gene005284:CDS | 45.0% |
!! | CCAAGATTGTTGCTTGGTGT+GGG | + | chr1.1:61967536-61967555 | MS.gene005284:CDS | 45.0% |
!! | TGCTGAAGCATTGGCAAAAG+AGG | + | chr1.1:61967410-61967429 | MS.gene005284:CDS | 45.0% |
CCCACACCAAGCAACAATCT+TGG | - | chr1.1:61967539-61967558 | None:intergenic | 50.0% | |
GAGAGAAGCTGCTGAAGCAT+TGG | + | chr1.1:61967401-61967420 | MS.gene005284:CDS | 50.0% | |
GCATGGAAATGCAAGAGGAG+AGG | + | chr1.1:61969342-61969361 | MS.gene005284:CDS | 50.0% | |
TGGAGTGTGCAATGCATGCA+TGG | + | chr1.1:61969325-61969344 | MS.gene005284:CDS | 50.0% | |
TGTTGTGCTAGCCAGTGATG+GGG | + | chr1.1:61969076-61969095 | MS.gene005284:CDS | 50.0% | |
! | AGCTTTGCTATGCAACTGGC+AGG | + | chr1.1:61968218-61968237 | MS.gene005284:CDS | 50.0% |
! | CACTGGCTAGCACAACAAAC+TGG | - | chr1.1:61969073-61969092 | None:intergenic | 50.0% |
! | CTAGCAATGTCGAGGGCTTT+TGG | + | chr1.1:61968975-61968994 | MS.gene005284:CDS | 50.0% |
! | GCCTCGGTTTTCTCCAAAAG+AGG | + | chr1.1:61967498-61967517 | MS.gene005284:CDS | 50.0% |
!! | GCCTCTTTTGGAGAAAACCG+AGG | - | chr1.1:61967502-61967521 | None:intergenic | 50.0% |
! | TCCGGGACTAGCAATGTCGA+GGG | + | chr1.1:61968968-61968987 | MS.gene005284:CDS | 55.0% |
AACCACACACGGTGCACCTC+AGG | - | chr1.1:61968933-61968952 | None:intergenic | 60.0% | |
AGTCCCGGAGACTCCTCATC+CGG | - | chr1.1:61968957-61968976 | None:intergenic | 60.0% | |
CCTCATCCGGCAACCACACA+CGG | - | chr1.1:61968944-61968963 | None:intergenic | 60.0% | |
CTAGGCAGAACACTCGCCCT+TGG | - | chr1.1:61968902-61968921 | None:intergenic | 60.0% | |
CTGCCTAGATGACGAGCCTG+AGG | + | chr1.1:61968914-61968933 | MS.gene005284:CDS | 60.0% | |
GCACCTCAGGCTCGTCATCT+AGG | - | chr1.1:61968920-61968939 | None:intergenic | 60.0% | |
GCCCTCGACATTGCTAGTCC+CGG | - | chr1.1:61968972-61968991 | None:intergenic | 60.0% | |
GTTGCCGGATGAGGAGTCTC+CGG | + | chr1.1:61968950-61968969 | MS.gene005284:CDS | 60.0% | |
TTGCCGGATGAGGAGTCTCC+GGG | + | chr1.1:61968951-61968970 | MS.gene005284:CDS | 60.0% | |
! | CTCCGGGACTAGCAATGTCG+AGG | + | chr1.1:61968967-61968986 | MS.gene005284:CDS | 60.0% |
AGCCTGAGGTGCACCGTGTG+TGG | + | chr1.1:61968928-61968947 | MS.gene005284:CDS | 65.0% | |
CCGTGTGTGGTTGCCGGATG+AGG | + | chr1.1:61968941-61968960 | MS.gene005284:CDS | 65.0% | |
GGTGCACCGTGTGTGGTTGC+CGG | + | chr1.1:61968935-61968954 | MS.gene005284:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 61967324 | 61969413 | 61967324 | ID=MS.gene005284 |
chr1.1 | mRNA | 61967324 | 61969413 | 61967324 | ID=MS.gene005284.t1;Parent=MS.gene005284 |
chr1.1 | exon | 61967324 | 61967560 | 61967324 | ID=MS.gene005284.t1.exon1;Parent=MS.gene005284.t1 |
chr1.1 | CDS | 61967324 | 61967560 | 61967324 | ID=cds.MS.gene005284.t1;Parent=MS.gene005284.t1 |
chr1.1 | exon | 61968117 | 61968425 | 61968117 | ID=MS.gene005284.t1.exon2;Parent=MS.gene005284.t1 |
chr1.1 | CDS | 61968117 | 61968425 | 61968117 | ID=cds.MS.gene005284.t1;Parent=MS.gene005284.t1 |
chr1.1 | exon | 61968652 | 61968769 | 61968652 | ID=MS.gene005284.t1.exon3;Parent=MS.gene005284.t1 |
chr1.1 | CDS | 61968652 | 61968769 | 61968652 | ID=cds.MS.gene005284.t1;Parent=MS.gene005284.t1 |
chr1.1 | exon | 61968874 | 61969097 | 61968874 | ID=MS.gene005284.t1.exon4;Parent=MS.gene005284.t1 |
chr1.1 | CDS | 61968874 | 61969097 | 61968874 | ID=cds.MS.gene005284.t1;Parent=MS.gene005284.t1 |
chr1.1 | exon | 61969243 | 61969413 | 61969243 | ID=MS.gene005284.t1.exon5;Parent=MS.gene005284.t1 |
chr1.1 | CDS | 61969243 | 61969413 | 61969243 | ID=cds.MS.gene005284.t1;Parent=MS.gene005284.t1 |
Gene Sequence |
Protein sequence |