Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00623.t1 | XP_003592967.1 | 94.5 | 457 | 16 | 1 | 1 | 448 | 33 | 489 | 1.40E-151 | 546.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00623.t1 | O49429 | 44.2 | 251 | 109 | 6 | 15 | 243 | 1 | 242 | 7.3e-48 | 193.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00623.t1 | G7INP0 | 94.5 | 457 | 16 | 1 | 1 | 448 | 33 | 489 | 1.0e-151 | 546.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene72993 | MS.gene00623 | PPI |
MS.gene011421 | MS.gene00623 | PPI |
MS.gene62799 | MS.gene00623 | PPI |
MS.gene99648 | MS.gene00623 | PPI |
MS.gene92318 | MS.gene00623 | PPI |
MS.gene024895 | MS.gene00623 | PPI |
MS.gene013822 | MS.gene00623 | PPI |
MS.gene000128 | MS.gene00623 | PPI |
MS.gene02591 | MS.gene00623 | PPI |
MS.gene033382 | MS.gene00623 | PPI |
MS.gene045065 | MS.gene00623 | PPI |
MS.gene80094 | MS.gene00623 | PPI |
MS.gene91416 | MS.gene00623 | PPI |
MS.gene75426 | MS.gene00623 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00623.t1 | MTR_2g006210 | 90.090 | 444 | 27 | 2 | 18 | 448 | 50 | 489 | 0.0 | 800 |
MS.gene00623.t1 | MTR_2g006240 | 76.536 | 179 | 39 | 1 | 1 | 179 | 1 | 176 | 1.57e-87 | 265 |
MS.gene00623.t1 | MTR_2g011000 | 53.968 | 126 | 57 | 1 | 83 | 208 | 66 | 190 | 2.53e-39 | 141 |
MS.gene00623.t1 | MTR_4g120340 | 54.464 | 112 | 50 | 1 | 83 | 194 | 80 | 190 | 1.81e-37 | 137 |
MS.gene00623.t1 | MTR_1g041745 | 45.223 | 157 | 69 | 4 | 55 | 198 | 35 | 187 | 3.83e-31 | 119 |
MS.gene00623.t1 | MTR_1g075460 | 49.558 | 113 | 56 | 1 | 86 | 198 | 94 | 205 | 3.74e-29 | 114 |
MS.gene00623.t1 | MTR_3g055620 | 82.540 | 63 | 11 | 0 | 226 | 288 | 21 | 83 | 2.23e-27 | 105 |
MS.gene00623.t1 | MTR_1g041745 | 57.292 | 96 | 40 | 1 | 86 | 181 | 76 | 170 | 1.58e-26 | 105 |
MS.gene00623.t1 | MTR_1g009840 | 32.653 | 343 | 171 | 15 | 6 | 322 | 5 | 313 | 4.19e-23 | 99.8 |
MS.gene00623.t1 | MTR_2g078090 | 45.133 | 113 | 60 | 2 | 83 | 195 | 86 | 196 | 4.54e-23 | 100 |
MS.gene00623.t1 | MTR_6g043040 | 37.864 | 103 | 54 | 3 | 89 | 186 | 72 | 169 | 1.48e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00623.t1 | AT4G20020 | 44.361 | 266 | 114 | 8 | 15 | 257 | 1 | 255 | 1.53e-61 | 206 |
MS.gene00623.t1 | AT4G20020 | 44.361 | 266 | 114 | 8 | 15 | 257 | 1 | 255 | 3.16e-61 | 205 |
MS.gene00623.t1 | AT5G44780 | 44.162 | 197 | 96 | 4 | 5 | 197 | 1 | 187 | 1.21e-42 | 160 |
MS.gene00623.t1 | AT1G11430 | 60.909 | 110 | 42 | 1 | 83 | 192 | 78 | 186 | 2.77e-40 | 144 |
MS.gene00623.t1 | AT3G06790 | 57.143 | 112 | 46 | 2 | 83 | 194 | 85 | 194 | 1.98e-36 | 134 |
MS.gene00623.t1 | AT3G06790 | 57.143 | 112 | 46 | 2 | 83 | 194 | 85 | 194 | 2.99e-36 | 134 |
MS.gene00623.t1 | AT2G35240 | 45.833 | 144 | 64 | 3 | 86 | 227 | 90 | 221 | 2.03e-31 | 120 |
MS.gene00623.t1 | AT1G32580 | 43.791 | 153 | 72 | 3 | 86 | 236 | 87 | 227 | 7.84e-31 | 119 |
MS.gene00623.t1 | AT3G15000 | 36.410 | 195 | 112 | 5 | 2 | 195 | 15 | 198 | 3.77e-25 | 107 |
MS.gene00623.t1 | AT1G72530 | 38.318 | 107 | 64 | 2 | 86 | 192 | 48 | 152 | 1.88e-17 | 80.5 |
MS.gene00623.t1 | AT1G72530 | 36.937 | 111 | 64 | 3 | 86 | 192 | 48 | 156 | 2.78e-15 | 74.7 |
MS.gene00623.t1 | AT1G53260 | 46.774 | 62 | 33 | 0 | 134 | 195 | 2 | 63 | 1.01e-11 | 65.1 |
MS.gene00623.t1 | AT1G53260 | 47.458 | 59 | 31 | 0 | 134 | 192 | 2 | 60 | 1.31e-11 | 65.5 |
Find 151 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCATGATTATTCCCCTTC+TGG | 0.152275 | 2.1:-75760871 | None:intergenic |
ACAAATACCTTCAAATTTCT+TGG | 0.193516 | 2.1:-75759509 | None:intergenic |
GCTGAATCAAACCGGATATT+TGG | 0.205342 | 2.1:-75760416 | None:intergenic |
GATGAAATAGAACCGGTAAT+TGG | 0.256818 | 2.1:-75759041 | None:intergenic |
AGGTGGAGGTTTGTTATCTC+TGG | 0.258166 | 2.1:-75759252 | None:intergenic |
GTGCTAAGGGTTTCAATATC+AGG | 0.262167 | 2.1:+75759306 | MS.gene00623:CDS |
CGACCTCCACCAGTACAATT+TGG | 0.262627 | 2.1:+75760197 | MS.gene00623:CDS |
TCGCTTTCGGTCCCAATTAC+CGG | 0.272059 | 2.1:+75759029 | MS.gene00623:CDS |
CGGAGTTATCTTTGTGTTGC+CGG | 0.290339 | 2.1:+75759935 | MS.gene00623:CDS |
TGAACGCCGTCGACGACGTT+TGG | 0.320333 | 2.1:-75759086 | None:intergenic |
GGATTTCAAACCATCATATA+TGG | 0.330866 | 2.1:+75760832 | MS.gene00623:CDS |
GAACGCCGTCGACGACGTTT+GGG | 0.334529 | 2.1:-75759085 | None:intergenic |
AGCTACTGCGACTTCGCTTT+CGG | 0.360324 | 2.1:+75759016 | MS.gene00623:CDS |
GTGCTTGATCATAGCTCTGC+TGG | 0.368496 | 2.1:-75760457 | None:intergenic |
GAGGGATTCCCTCGGTTGTT+TGG | 0.372916 | 2.1:-75760266 | None:intergenic |
ATGCGCCACGGCAGAACTTT+GGG | 0.375645 | 2.1:+75760657 | MS.gene00623:CDS |
AGCATGATTATTCCCCTTCT+GGG | 0.387365 | 2.1:-75760870 | None:intergenic |
CCAAGGGATGGTAGAAACTA+TGG | 0.387810 | 2.1:+75760311 | MS.gene00623:CDS |
TTCTTTCTCCTTGTCCTGGC+GGG | 0.390261 | 2.1:-75760730 | None:intergenic |
CCTCCATACTGCTTGTTCAC+AGG | 0.391130 | 2.1:-75759972 | None:intergenic |
CAGCAAAATGTTGGCCCGCC+AGG | 0.397801 | 2.1:+75760716 | MS.gene00623:CDS |
TATGCGCCACGGCAGAACTT+TGG | 0.400286 | 2.1:+75760656 | MS.gene00623:CDS |
ATGAAATAGAACCGGTAATT+GGG | 0.400337 | 2.1:-75759040 | None:intergenic |
TTTCCACCTCAACAGAACTA+TGG | 0.401446 | 2.1:+75760347 | MS.gene00623:CDS |
TGCTTGATCATAGCTCTGCT+GGG | 0.408969 | 2.1:-75760456 | None:intergenic |
CAGGAGGTGGAAATCTTTGT+TGG | 0.409047 | 2.1:-75760910 | None:intergenic |
ACCGGATATTTGGTTGTTGT+TGG | 0.414885 | 2.1:-75760406 | None:intergenic |
GGAATCCCTCTTACAACAAT+CGG | 0.421869 | 2.1:+75760279 | MS.gene00623:CDS |
GTACAATTTGGGAGAAATCT+AGG | 0.426083 | 2.1:+75760209 | MS.gene00623:CDS |
TTTCTTCTTTCTCCTTGTCC+TGG | 0.430267 | 2.1:-75760734 | None:intergenic |
GACCTCCACCAGTACAATTT+GGG | 0.430347 | 2.1:+75760198 | MS.gene00623:CDS |
AGGACCATAGGTTTGCTGTT+TGG | 0.430424 | 2.1:-75760570 | None:intergenic |
TATCCACCCAAACAAAACTA+TGG | 0.437816 | 2.1:+75760488 | MS.gene00623:CDS |
GACCCTGTGAACAAGCAGTA+TGG | 0.438673 | 2.1:+75759969 | MS.gene00623:CDS |
CGAATCATTTCTTCAGGTGG+AGG | 0.439284 | 2.1:-75759266 | None:intergenic |
TATGCGCCACAGCAGAACTT+TGG | 0.449668 | 2.1:+75760758 | MS.gene00623:CDS |
TTTCTTCTTTCTCCTTCTCC+CGG | 0.453717 | 2.1:-75760632 | None:intergenic |
GAAGAGTCCAAGAAATTTGA+AGG | 0.456510 | 2.1:+75759502 | MS.gene00623:CDS |
GCCAACAACAACCAAATATC+CGG | 0.458194 | 2.1:+75760405 | MS.gene00623:CDS |
TCAAATTCCTCCATATATGA+TGG | 0.460060 | 2.1:-75760842 | None:intergenic |
TATCCACCACAGCAGAGCTT+TGG | 0.463958 | 2.1:+75760605 | MS.gene00623:CDS |
GAACTTTGGACCACTGGGAC+AGG | 0.466168 | 2.1:+75760772 | MS.gene00623:CDS |
CGAGGTTGATCTGAATGAAC+GGG | 0.468117 | 2.1:-75759111 | None:intergenic |
ACAGCAGAGCTTTGGACCAC+CGG | 0.470038 | 2.1:+75760613 | MS.gene00623:CDS |
GGAATCCCGATTGTTGTAAG+AGG | 0.470092 | 2.1:-75760285 | None:intergenic |
AGATTTCTCCCAAATTGTAC+TGG | 0.474613 | 2.1:-75760206 | None:intergenic |
AATTGTACTGGTGGAGGTCG+AGG | 0.477720 | 2.1:-75760194 | None:intergenic |
CGGCAGAACTTTGGGCCACC+GGG | 0.483926 | 2.1:+75760665 | MS.gene00623:CDS |
TTATGAAGAAACTTGTGCTA+AGG | 0.485239 | 2.1:+75759292 | MS.gene00623:CDS |
ACAGCAGAACTTTGGACCAC+TGG | 0.486130 | 2.1:+75760766 | MS.gene00623:CDS |
TATTTGGTTGTTGTTGGCCA+AGG | 0.486495 | 2.1:-75760400 | None:intergenic |
ACGGCAGAACTTTGGGCCAC+CGG | 0.489335 | 2.1:+75760664 | MS.gene00623:CDS |
TATGAAGAAACTTGTGCTAA+GGG | 0.489463 | 2.1:+75759293 | MS.gene00623:CDS |
ATGGTGTCAGGACCAATCTC+AGG | 0.489874 | 2.1:-75759179 | None:intergenic |
GGTGGAGGTTTGTTATCTCT+GGG | 0.493016 | 2.1:-75759251 | None:intergenic |
CCTTCGAAGAGGATGGTGTC+AGG | 0.493439 | 2.1:-75759191 | None:intergenic |
CTCCATACTGCTTGTTCACA+GGG | 0.493888 | 2.1:-75759971 | None:intergenic |
CCAGTAAAATTGCTAGGGCC+AGG | 0.494495 | 2.1:-75760929 | None:intergenic |
AGGAGGTGGAAATCTTTGTT+GGG | 0.495454 | 2.1:-75760909 | None:intergenic |
CAACAAAGATTTCCACCTCC+TGG | 0.497247 | 2.1:+75760911 | MS.gene00623:CDS |
CGAAGTCGCAGTAGCTGAGA+AGG | 0.498879 | 2.1:-75759009 | None:intergenic |
CTCCCAAATTGTACTGGTGG+AGG | 0.499376 | 2.1:-75760200 | None:intergenic |
TCAGAACTCAGTCCTGAGAT+TGG | 0.500163 | 2.1:+75759167 | MS.gene00623:CDS |
ACAGGGTCAATGTAAGAATC+CGG | 0.508563 | 2.1:-75759954 | None:intergenic |
AAAATGTGATGAAATAGAAC+CGG | 0.509305 | 2.1:-75759048 | None:intergenic |
CCACTGGGACAGGGAGAAAG+AGG | 0.509553 | 2.1:+75760782 | MS.gene00623:CDS |
TCTCTCTTGTCTTCTCGCTA+CGG | 0.509897 | 2.1:+75759137 | MS.gene00623:CDS |
CTTCTTCTGTCTACTTCTCC+CGG | 0.510565 | 2.1:-75760683 | None:intergenic |
AAGGTTGCGATTACAATCAC+TGG | 0.516564 | 2.1:+75759210 | MS.gene00623:CDS |
TATTCCAAACAGCAAACCTA+TGG | 0.521162 | 2.1:+75760566 | MS.gene00623:CDS |
GAGAATTAGCGACGATGCCA+TGG | 0.522594 | 2.1:-75758946 | None:intergenic |
GCTGCGATGCTGAATCAAAC+CGG | 0.524624 | 2.1:-75760424 | None:intergenic |
CTGTGCCTAGTGAAGGTGGA+TGG | 0.529404 | 2.1:+75760810 | MS.gene00623:CDS |
GTGATCTCAGGCTACGGCGG+AGG | 0.532432 | 2.1:-75758968 | None:intergenic |
GGTGGATACTGTGGCGAAGC+AGG | 0.533094 | 2.1:-75760590 | None:intergenic |
CCATAGTTTCTACCATCCCT+TGG | 0.533589 | 2.1:-75760311 | None:intergenic |
TGCAGTACAACTGTTTACAC+TGG | 0.536636 | 2.1:+75759457 | MS.gene00623:CDS |
ACCTCTCCAGTAAAATTGCT+AGG | 0.537861 | 2.1:-75760935 | None:intergenic |
AAACGAATCATTTCTTCAGG+TGG | 0.541590 | 2.1:-75759269 | None:intergenic |
TAGCTGAGAAGGAGTGGTGG+AGG | 0.542761 | 2.1:-75758998 | None:intergenic |
GAATCCCTCTTACAACAATC+GGG | 0.542891 | 2.1:+75760280 | MS.gene00623:CDS |
AGCTTTGGACCACCGGGAGA+AGG | 0.543753 | 2.1:+75760620 | MS.gene00623:CDS |
GGAATTTGAACAAGCCCAGA+AGG | 0.546452 | 2.1:+75760856 | MS.gene00623:CDS |
AAATCCCATCCACCTTCACT+AGG | 0.549954 | 2.1:-75760815 | None:intergenic |
TGATCATAGCTCTGCTGGGG+TGG | 0.551769 | 2.1:-75760452 | None:intergenic |
CTTCTTTCTCCTTGTCCTGG+CGG | 0.551794 | 2.1:-75760731 | None:intergenic |
CTGTGGCGAAGCAGGACCAT+AGG | 0.556513 | 2.1:-75760582 | None:intergenic |
GTGGAGGAATGTGTGATGCT+TGG | 0.556911 | 2.1:-75760370 | None:intergenic |
GGTCCAAAGCTCTGCTGTGG+TGG | 0.557931 | 2.1:-75760608 | None:intergenic |
TTTCTCCCAAATTGTACTGG+TGG | 0.558252 | 2.1:-75760203 | None:intergenic |
ACAGGAGATCAGTACATTGA+AGG | 0.559699 | 2.1:+75760161 | MS.gene00623:intron |
CCTCTTTCTCCCTGTCCCAG+TGG | 0.561101 | 2.1:-75760782 | None:intergenic |
TCGAGGTTGATCTGAATGAA+CGG | 0.562081 | 2.1:-75759112 | None:intergenic |
CAGCAGAACTTTGGACCACT+GGG | 0.562728 | 2.1:+75760767 | MS.gene00623:CDS |
AACGCCGTCGACGACGTTTG+GGG | 0.563351 | 2.1:-75759084 | None:intergenic |
GTTTCTACCATCCCTTGGCA+TGG | 0.563433 | 2.1:-75760306 | None:intergenic |
TGTGCCTAGTGAAGGTGGAT+GGG | 0.564317 | 2.1:+75760811 | MS.gene00623:CDS |
GGCAACACAAAGATAACTCC+GGG | 0.564421 | 2.1:-75759933 | None:intergenic |
AAATTGCTAGGGCCAGGAGG+TGG | 0.569045 | 2.1:-75760923 | None:intergenic |
AACTCTGTGCCTAGTGAAGG+TGG | 0.569286 | 2.1:+75760806 | MS.gene00623:CDS |
AATGTTGGCCCGCCAGGACA+AGG | 0.569289 | 2.1:+75760722 | MS.gene00623:CDS |
CAGCAGAGCTTTGGACCACC+GGG | 0.574321 | 2.1:+75760614 | MS.gene00623:CDS |
CGGCAACACAAAGATAACTC+CGG | 0.575792 | 2.1:-75759934 | None:intergenic |
TGAGAAGGAGTGGTGGAGGA+CGG | 0.580675 | 2.1:-75758994 | None:intergenic |
TCGCAGTAGCTGAGAAGGAG+TGG | 0.580953 | 2.1:-75759004 | None:intergenic |
TATGCGCCGCAGCAAAATGT+TGG | 0.581806 | 2.1:+75760707 | MS.gene00623:CDS |
CCTGACACCATCCTCTTCGA+AGG | 0.582398 | 2.1:+75759191 | MS.gene00623:CDS |
GGAGGACGGAGAGTGATCTC+AGG | 0.582544 | 2.1:-75758980 | None:intergenic |
TAATCATGCTGAAGAACAGA+CGG | 0.584349 | 2.1:+75760883 | MS.gene00623:CDS |
GGAAACTCTGTGCCTAGTGA+AGG | 0.586295 | 2.1:+75760803 | MS.gene00623:CDS |
GAATCCCGATTGTTGTAAGA+GGG | 0.586300 | 2.1:-75760284 | None:intergenic |
CCTCTCCAGTAAAATTGCTA+GGG | 0.592900 | 2.1:-75760934 | None:intergenic |
TAGGAGGAAGACGAGACTAT+CGG | 0.594936 | 2.1:+75760228 | MS.gene00623:CDS |
CGGGATTCCATGCCAAGGGA+TGG | 0.595865 | 2.1:+75760299 | MS.gene00623:CDS |
AGCTATGATCAAGCACCACA+AGG | 0.596634 | 2.1:+75760464 | MS.gene00623:CDS |
CTCTGCTGTGGTGGATACTG+TGG | 0.600550 | 2.1:-75760599 | None:intergenic |
TGGCCATAGTTCTGTTGAGG+TGG | 0.603738 | 2.1:-75760350 | None:intergenic |
GCTTGGCCATAGTTCTGTTG+AGG | 0.603846 | 2.1:-75760353 | None:intergenic |
AGTGGTCCAAAGTTCTGCTG+TGG | 0.607332 | 2.1:-75760764 | None:intergenic |
ATTGTACTGGTGGAGGTCGA+GGG | 0.609778 | 2.1:-75760193 | None:intergenic |
ATCAATTGCCAAACAACCGA+GGG | 0.610471 | 2.1:+75760258 | MS.gene00623:CDS |
CTTCTTTCTCCTTCTCCCGG+TGG | 0.610979 | 2.1:-75760629 | None:intergenic |
TGTTGTAAGAGGGATTCCCT+CGG | 0.611597 | 2.1:-75760274 | None:intergenic |
AATCATGCTGAAGAACAGAC+GGG | 0.612561 | 2.1:+75760884 | MS.gene00623:CDS |
AAATCCCCAAACGTCGTCGA+CGG | 0.615141 | 2.1:+75759080 | MS.gene00623:CDS |
ATCGCAACCTTCGAAGAGGA+TGG | 0.615614 | 2.1:-75759198 | None:intergenic |
CGGAGAGTGATCTCAGGCTA+CGG | 0.616194 | 2.1:-75758974 | None:intergenic |
AACTTTGGACCACTGGGACA+GGG | 0.616250 | 2.1:+75760773 | MS.gene00623:CDS |
CAGTAGCTGAGAAGGAGTGG+TGG | 0.617757 | 2.1:-75759001 | None:intergenic |
ATTCCTCCACAACAAAACCT+TGG | 0.618293 | 2.1:+75760383 | MS.gene00623:CDS |
GGTGGCCCAAAGTTCTGCCG+TGG | 0.626931 | 2.1:-75760662 | None:intergenic |
GGTGGTCCAAAGCTCTGCTG+TGG | 0.627905 | 2.1:-75760611 | None:intergenic |
GAATTTGAACAAGCCCAGAA+GGG | 0.628457 | 2.1:+75760857 | MS.gene00623:CDS |
AGAAGACAAGAGAGAAATCG+AGG | 0.630277 | 2.1:-75759129 | None:intergenic |
TTTCAAACCATCATATATGG+AGG | 0.632324 | 2.1:+75760835 | MS.gene00623:CDS |
CAATCGGGATTCCATGCCAA+GGG | 0.634508 | 2.1:+75760295 | MS.gene00623:CDS |
AATTTGAACAAGCCCAGAAG+GGG | 0.637787 | 2.1:+75760858 | MS.gene00623:CDS |
ACAATCGGGATTCCATGCCA+AGG | 0.637883 | 2.1:+75760294 | MS.gene00623:CDS |
AAAGAAGAAATTATGCGCCA+CGG | 0.637957 | 2.1:+75760645 | MS.gene00623:CDS |
AATCAATTGCCAAACAACCG+AGG | 0.644295 | 2.1:+75760257 | MS.gene00623:CDS |
CGCTTGATTGAAGTTCTGCG+AGG | 0.644978 | 2.1:-75760534 | None:intergenic |
GCTTGATCATAGCTCTGCTG+GGG | 0.651267 | 2.1:-75760455 | None:intergenic |
TGTAATCGCAACCTTCGAAG+AGG | 0.655228 | 2.1:-75759202 | None:intergenic |
GTAAAATTGCTAGGGCCAGG+AGG | 0.658786 | 2.1:-75760926 | None:intergenic |
TGTTTGGGTGGATACCCTTG+TGG | 0.664703 | 2.1:-75760479 | None:intergenic |
CCTGTGAACAAGCAGTATGG+AGG | 0.671051 | 2.1:+75759972 | MS.gene00623:CDS |
GCTATGATCAAGCACCACAA+GGG | 0.671691 | 2.1:+75760465 | MS.gene00623:CDS |
CTTCTGTCTACTTCTCCCGG+TGG | 0.703848 | 2.1:-75760680 | None:intergenic |
AGAGTGATCTCAGGCTACGG+CGG | 0.717816 | 2.1:-75758971 | None:intergenic |
CAATTTGGGAGAAATCTAGG+AGG | 0.741053 | 2.1:+75760212 | MS.gene00623:CDS |
ATCATGCTGAAGAACAGACG+GGG | 0.746376 | 2.1:+75760885 | MS.gene00623:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAGAAAGATTAATATTA+TGG | + | chr2.1:75759367-75759386 | MS.gene00623:intron | 10.0% |
!! | ACAAAAAAAAAAAATTGCAA+AGG | + | chr2.1:75761005-75761024 | MS.gene00623:intron | 15.0% |
!!! | TTATACAATGTATCATTTTT+TGG | - | chr2.1:75759809-75759828 | None:intergenic | 15.0% |
!! | TTTATGGTTTCTTAAATACT+TGG | + | chr2.1:75760086-75760105 | MS.gene00623:intron | 20.0% |
!!! | TGTTTTTGTTATTTTATGCA+GGG | + | chr2.1:75761114-75761133 | MS.gene00623:intron | 20.0% |
!!! | TTGTTTTTGTTATTTTATGC+AGG | + | chr2.1:75761113-75761132 | MS.gene00623:intron | 20.0% |
! | AAAATGTGATGAAATAGAAC+CGG | - | chr2.1:75759051-75759070 | None:intergenic | 25.0% |
! | AAATAGGTCAATGAAATCTA+AGG | - | chr2.1:75759860-75759879 | None:intergenic | 25.0% |
! | AATAGGTCAATGAAATCTAA+GGG | - | chr2.1:75759859-75759878 | None:intergenic | 25.0% |
! | ACAAATACCTTCAAATTTCT+TGG | - | chr2.1:75759512-75759531 | None:intergenic | 25.0% |
! | ATTTATTTGAGAGCAACTTT+CGG | + | chr2.1:75760130-75760149 | MS.gene00623:intron | 25.0% |
! | CAATGAAATCTAATCTAAGT+AGG | - | chr2.1:75759543-75759562 | None:intergenic | 25.0% |
! | CTTTCTAATCTATAACAAAC+AGG | - | chr2.1:75759579-75759598 | None:intergenic | 25.0% |
! | TAAAAACGAATCATTTCTTC+AGG | - | chr2.1:75759275-75759294 | None:intergenic | 25.0% |
! | TCTATTGTCTCAACTAAAAT+AGG | - | chr2.1:75759876-75759895 | None:intergenic | 25.0% |
!! | GAGACAATAGAAAATGATTT+TGG | + | chr2.1:75759885-75759904 | MS.gene00623:intron | 25.0% |
!!! | AATGCACGCTATTTTATTTA+TGG | + | chr2.1:75760070-75760089 | MS.gene00623:intron | 25.0% |
!!! | TGATTTTTTTAGTGTTGAAG+AGG | + | chr2.1:75759414-75759433 | MS.gene00623:intron | 25.0% |
ATGAAATAGAACCGGTAATT+GGG | - | chr2.1:75759043-75759062 | None:intergenic | 30.0% | |
ATTCTTAAAGAAGCCACAAA+TGG | + | chr2.1:75759832-75759851 | MS.gene00623:intron | 30.0% | |
GATTTCATTGACCTAGTTTA+TGG | + | chr2.1:75759553-75759572 | MS.gene00623:intron | 30.0% | |
GGATTTCAAACCATCATATA+TGG | + | chr2.1:75760832-75760851 | MS.gene00623:CDS | 30.0% | |
TACACATGATTCGTAAAACA+AGG | - | chr2.1:75761042-75761061 | None:intergenic | 30.0% | |
TATGAAGAAACTTGTGCTAA+GGG | + | chr2.1:75759293-75759312 | MS.gene00623:CDS | 30.0% | |
TCAAATTCCTCCATATATGA+TGG | - | chr2.1:75760845-75760864 | None:intergenic | 30.0% | |
TTATGAAGAAACTTGTGCTA+AGG | + | chr2.1:75759292-75759311 | MS.gene00623:CDS | 30.0% | |
TTCTTAAAGAAGCCACAAAT+GGG | + | chr2.1:75759833-75759852 | MS.gene00623:intron | 30.0% | |
TTTCAAACCATCATATATGG+AGG | + | chr2.1:75760835-75760854 | MS.gene00623:CDS | 30.0% | |
! | AGAGGTATGATAGAATAGAA+TGG | + | chr2.1:75760952-75760971 | MS.gene00623:intron | 30.0% |
AAACGAATCATTTCTTCAGG+TGG | - | chr2.1:75759272-75759291 | None:intergenic | 35.0% | |
AAAGAAGAAATTATGCGCCA+CGG | + | chr2.1:75760645-75760664 | MS.gene00623:CDS | 35.0% | |
AGATTTCTCCCAAATTGTAC+TGG | - | chr2.1:75760209-75760228 | None:intergenic | 35.0% | |
CGAATCATGTGTACTGTAAA+TGG | + | chr2.1:75761049-75761068 | MS.gene00623:intron | 35.0% | |
GAAGAGTCCAAGAAATTTGA+AGG | + | chr2.1:75759502-75759521 | MS.gene00623:CDS | 35.0% | |
GATGAAATAGAACCGGTAAT+TGG | - | chr2.1:75759044-75759063 | None:intergenic | 35.0% | |
GTACAATTTGGGAGAAATCT+AGG | + | chr2.1:75760209-75760228 | MS.gene00623:CDS | 35.0% | |
TAACAAACAGGCCATAAACT+AGG | - | chr2.1:75759567-75759586 | None:intergenic | 35.0% | |
TAATCATGCTGAAGAACAGA+CGG | + | chr2.1:75760883-75760902 | MS.gene00623:CDS | 35.0% | |
TATCCACCCAAACAAAACTA+TGG | + | chr2.1:75760488-75760507 | MS.gene00623:CDS | 35.0% | |
TATTCCAAACAGCAAACCTA+TGG | + | chr2.1:75760566-75760585 | MS.gene00623:CDS | 35.0% | |
! | TGTTGAGGTGGAAAATTTTG+TGG | - | chr2.1:75760341-75760360 | None:intergenic | 35.0% |
!! | TGCTGTTTGGAATAGTTTTG+TGG | - | chr2.1:75760560-75760579 | None:intergenic | 35.0% |
!!! | AGCTTGACCATAGTTTTGTT+TGG | - | chr2.1:75760498-75760517 | None:intergenic | 35.0% |
!!! | GCTTGACCATAGTTTTGTTT+GGG | - | chr2.1:75760497-75760516 | None:intergenic | 35.0% |
AAGGTTGCGATTACAATCAC+TGG | + | chr2.1:75759210-75759229 | MS.gene00623:CDS | 40.0% | |
AATCAATTGCCAAACAACCG+AGG | + | chr2.1:75760257-75760276 | MS.gene00623:CDS | 40.0% | |
AATCATGCTGAAGAACAGAC+GGG | + | chr2.1:75760884-75760903 | MS.gene00623:CDS | 40.0% | |
AATTTGAACAAGCCCAGAAG+GGG | + | chr2.1:75760858-75760877 | MS.gene00623:CDS | 40.0% | |
ACAGGAGATCAGTACATTGA+AGG | + | chr2.1:75760161-75760180 | MS.gene00623:intron | 40.0% | |
ACAGGGTCAATGTAAGAATC+CGG | - | chr2.1:75759957-75759976 | None:intergenic | 40.0% | |
ACCGGATATTTGGTTGTTGT+TGG | - | chr2.1:75760409-75760428 | None:intergenic | 40.0% | |
ACCTCTCCAGTAAAATTGCT+AGG | - | chr2.1:75760938-75760957 | None:intergenic | 40.0% | |
AGAAGACAAGAGAGAAATCG+AGG | - | chr2.1:75759132-75759151 | None:intergenic | 40.0% | |
AGCATGATTATTCCCCTTCT+GGG | - | chr2.1:75760873-75760892 | None:intergenic | 40.0% | |
AGGAGGTGGAAATCTTTGTT+GGG | - | chr2.1:75760912-75760931 | None:intergenic | 40.0% | |
ATCAATTGCCAAACAACCGA+GGG | + | chr2.1:75760258-75760277 | MS.gene00623:CDS | 40.0% | |
ATTCCTCCACAACAAAACCT+TGG | + | chr2.1:75760383-75760402 | MS.gene00623:CDS | 40.0% | |
CAATTTGGGAGAAATCTAGG+AGG | + | chr2.1:75760212-75760231 | MS.gene00623:CDS | 40.0% | |
CCTCTCCAGTAAAATTGCTA+GGG | - | chr2.1:75760937-75760956 | None:intergenic | 40.0% | |
GAATCCCGATTGTTGTAAGA+GGG | - | chr2.1:75760287-75760306 | None:intergenic | 40.0% | |
GAATCCCTCTTACAACAATC+GGG | + | chr2.1:75760280-75760299 | MS.gene00623:CDS | 40.0% | |
GAATTTGAACAAGCCCAGAA+GGG | + | chr2.1:75760857-75760876 | MS.gene00623:CDS | 40.0% | |
GCCAACAACAACCAAATATC+CGG | + | chr2.1:75760405-75760424 | MS.gene00623:CDS | 40.0% | |
GCTGAATCAAACCGGATATT+TGG | - | chr2.1:75760419-75760438 | None:intergenic | 40.0% | |
GGAATCCCTCTTACAACAAT+CGG | + | chr2.1:75760279-75760298 | MS.gene00623:CDS | 40.0% | |
GTGCTAAGGGTTTCAATATC+AGG | + | chr2.1:75759306-75759325 | MS.gene00623:CDS | 40.0% | |
TGCAGTACAACTGTTTACAC+TGG | + | chr2.1:75759457-75759476 | MS.gene00623:CDS | 40.0% | |
TTTCCACCTCAACAGAACTA+TGG | + | chr2.1:75760347-75760366 | MS.gene00623:CDS | 40.0% | |
TTTCTCCCAAATTGTACTGG+TGG | - | chr2.1:75760206-75760225 | None:intergenic | 40.0% | |
TTTCTTCTTTCTCCTTCTCC+CGG | - | chr2.1:75760635-75760654 | None:intergenic | 40.0% | |
TTTCTTCTTTCTCCTTGTCC+TGG | - | chr2.1:75760737-75760756 | None:intergenic | 40.0% | |
! | TATTTGGTTGTTGTTGGCCA+AGG | - | chr2.1:75760403-75760422 | None:intergenic | 40.0% |
! | TCGAGGTTGATCTGAATGAA+CGG | - | chr2.1:75759115-75759134 | None:intergenic | 40.0% |
! | TGAGGTGGAAAATTTTGTGG+AGG | - | chr2.1:75760338-75760357 | None:intergenic | 40.0% |
! | TGCGAGGCTGAATAATTTTG+TGG | - | chr2.1:75760521-75760540 | None:intergenic | 40.0% |
!!! | TGACCATAGTTTTGTTTGGG+TGG | - | chr2.1:75760494-75760513 | None:intergenic | 40.0% |
AAATCCCATCCACCTTCACT+AGG | - | chr2.1:75760818-75760837 | None:intergenic | 45.0% | |
AGCTATGATCAAGCACCACA+AGG | + | chr2.1:75760464-75760483 | MS.gene00623:CDS | 45.0% | |
ATCATGCTGAAGAACAGACG+GGG | + | chr2.1:75760885-75760904 | MS.gene00623:CDS | 45.0% | |
ATTTATCGTCTCTCGCGTTC+TGG | + | chr2.1:75760013-75760032 | MS.gene00623:intron | 45.0% | |
CAACAAAGATTTCCACCTCC+TGG | + | chr2.1:75760911-75760930 | MS.gene00623:CDS | 45.0% | |
CAGCATGATTATTCCCCTTC+TGG | - | chr2.1:75760874-75760893 | None:intergenic | 45.0% | |
CAGGAGGTGGAAATCTTTGT+TGG | - | chr2.1:75760913-75760932 | None:intergenic | 45.0% | |
CCAAGGGATGGTAGAAACTA+TGG | + | chr2.1:75760311-75760330 | MS.gene00623:CDS | 45.0% | |
CCATAGTTTCTACCATCCCT+TGG | - | chr2.1:75760314-75760333 | None:intergenic | 45.0% | |
CGAATCATTTCTTCAGGTGG+AGG | - | chr2.1:75759269-75759288 | None:intergenic | 45.0% | |
CGGAGTTATCTTTGTGTTGC+CGG | + | chr2.1:75759935-75759954 | MS.gene00623:CDS | 45.0% | |
CGGCAACACAAAGATAACTC+CGG | - | chr2.1:75759937-75759956 | None:intergenic | 45.0% | |
CTCCATACTGCTTGTTCACA+GGG | - | chr2.1:75759974-75759993 | None:intergenic | 45.0% | |
CTTCTTCTGTCTACTTCTCC+CGG | - | chr2.1:75760686-75760705 | None:intergenic | 45.0% | |
GAAATCTAAGGGCCCATTTG+TGG | - | chr2.1:75759848-75759867 | None:intergenic | 45.0% | |
GACCTCCACCAGTACAATTT+GGG | + | chr2.1:75760198-75760217 | MS.gene00623:CDS | 45.0% | |
GCTATGATCAAGCACCACAA+GGG | + | chr2.1:75760465-75760484 | MS.gene00623:CDS | 45.0% | |
GGAATCCCGATTGTTGTAAG+AGG | - | chr2.1:75760288-75760307 | None:intergenic | 45.0% | |
GGAATTTGAACAAGCCCAGA+AGG | + | chr2.1:75760856-75760875 | MS.gene00623:CDS | 45.0% | |
GGCAACACAAAGATAACTCC+GGG | - | chr2.1:75759936-75759955 | None:intergenic | 45.0% | |
TAGGAGGAAGACGAGACTAT+CGG | + | chr2.1:75760228-75760247 | MS.gene00623:CDS | 45.0% | |
TCAGAACTCAGTCCTGAGAT+TGG | + | chr2.1:75759167-75759186 | MS.gene00623:CDS | 45.0% | |
TCTCTCTTGTCTTCTCGCTA+CGG | + | chr2.1:75759137-75759156 | MS.gene00623:CDS | 45.0% | |
TGTAATCGCAACCTTCGAAG+AGG | - | chr2.1:75759205-75759224 | None:intergenic | 45.0% | |
TGTTGTAAGAGGGATTCCCT+CGG | - | chr2.1:75760277-75760296 | None:intergenic | 45.0% | |
! | CAACTTTCGGTGTGTGATAC+AGG | + | chr2.1:75760143-75760162 | MS.gene00623:intron | 45.0% |
! | CCCTAGCAATTTTACTGGAG+AGG | + | chr2.1:75760934-75760953 | MS.gene00623:CDS | 45.0% |
! | CGAGGTTGATCTGAATGAAC+GGG | - | chr2.1:75759114-75759133 | None:intergenic | 45.0% |
! | GGATTGTTGTGCTTTTCGAC+AGG | + | chr2.1:75759906-75759925 | MS.gene00623:intron | 45.0% |
! | TGCTTGATCATAGCTCTGCT+GGG | - | chr2.1:75760459-75760478 | None:intergenic | 45.0% |
!! | AGGACCATAGGTTTGCTGTT+TGG | - | chr2.1:75760573-75760592 | None:intergenic | 45.0% |
!! | AGGTGGAGGTTTGTTATCTC+TGG | - | chr2.1:75759255-75759274 | None:intergenic | 45.0% |
!! | GGTGGAGGTTTGTTATCTCT+GGG | - | chr2.1:75759254-75759273 | None:intergenic | 45.0% |
!!! | TGTTGGCCAAGGTTTTGTTG+TGG | - | chr2.1:75760392-75760411 | None:intergenic | 45.0% |
!!! | ATAAATTAAAAAAGTAATTT+TGG | + | chr2.1:75759692-75759711 | MS.gene00623:intron | 5.0% |
AAATCCCCAAACGTCGTCGA+CGG | + | chr2.1:75759080-75759099 | MS.gene00623:CDS | 50.0% | |
AACTCTGTGCCTAGTGAAGG+TGG | + | chr2.1:75760806-75760825 | MS.gene00623:CDS | 50.0% | |
AACTTTGGACCACTGGGACA+GGG | + | chr2.1:75760773-75760792 | MS.gene00623:CDS | 50.0% | |
ACAATCGGGATTCCATGCCA+AGG | + | chr2.1:75760294-75760313 | MS.gene00623:CDS | 50.0% | |
ACAGCAGAACTTTGGACCAC+TGG | + | chr2.1:75760766-75760785 | MS.gene00623:CDS | 50.0% | |
AGCTACTGCGACTTCGCTTT+CGG | + | chr2.1:75759016-75759035 | MS.gene00623:CDS | 50.0% | |
AGTGGTCCAAAGTTCTGCTG+TGG | - | chr2.1:75760767-75760786 | None:intergenic | 50.0% | |
ATCGCAACCTTCGAAGAGGA+TGG | - | chr2.1:75759201-75759220 | None:intergenic | 50.0% | |
CAATCGGGATTCCATGCCAA+GGG | + | chr2.1:75760295-75760314 | MS.gene00623:CDS | 50.0% | |
CAGCAGAACTTTGGACCACT+GGG | + | chr2.1:75760767-75760786 | MS.gene00623:CDS | 50.0% | |
CCAGTAAAATTGCTAGGGCC+AGG | - | chr2.1:75760932-75760951 | None:intergenic | 50.0% | |
CCTCCATACTGCTTGTTCAC+AGG | - | chr2.1:75759975-75759994 | None:intergenic | 50.0% | |
CCTGTGAACAAGCAGTATGG+AGG | + | chr2.1:75759972-75759991 | MS.gene00623:CDS | 50.0% | |
CGACCTCCACCAGTACAATT+TGG | + | chr2.1:75760197-75760216 | MS.gene00623:CDS | 50.0% | |
CGCTTGATTGAAGTTCTGCG+AGG | - | chr2.1:75760537-75760556 | None:intergenic | 50.0% | |
CTTCTTTCTCCTTGTCCTGG+CGG | - | chr2.1:75760734-75760753 | None:intergenic | 50.0% | |
GACCCTGTGAACAAGCAGTA+TGG | + | chr2.1:75759969-75759988 | MS.gene00623:CDS | 50.0% | |
GCTGCGATGCTGAATCAAAC+CGG | - | chr2.1:75760427-75760446 | None:intergenic | 50.0% | |
GGAAACTCTGTGCCTAGTGA+AGG | + | chr2.1:75760803-75760822 | MS.gene00623:CDS | 50.0% | |
GTAAAATTGCTAGGGCCAGG+AGG | - | chr2.1:75760929-75760948 | None:intergenic | 50.0% | |
GTGGAGGAATGTGTGATGCT+TGG | - | chr2.1:75760373-75760392 | None:intergenic | 50.0% | |
GTTTCTACCATCCCTTGGCA+TGG | - | chr2.1:75760309-75760328 | None:intergenic | 50.0% | |
TATCCACCACAGCAGAGCTT+TGG | + | chr2.1:75760605-75760624 | MS.gene00623:CDS | 50.0% | |
TATGCGCCACAGCAGAACTT+TGG | + | chr2.1:75760758-75760777 | MS.gene00623:CDS | 50.0% | |
TATGCGCCGCAGCAAAATGT+TGG | + | chr2.1:75760707-75760726 | MS.gene00623:CDS | 50.0% | |
TCGCTTTCGGTCCCAATTAC+CGG | + | chr2.1:75759029-75759048 | MS.gene00623:CDS | 50.0% | |
TGTGCCTAGTGAAGGTGGAT+GGG | + | chr2.1:75760811-75760830 | MS.gene00623:CDS | 50.0% | |
TGTTTGGGTGGATACCCTTG+TGG | - | chr2.1:75760482-75760501 | None:intergenic | 50.0% | |
TTCTTTCTCCTTGTCCTGGC+GGG | - | chr2.1:75760733-75760752 | None:intergenic | 50.0% | |
! | AATTGTACTGGTGGAGGTCG+AGG | - | chr2.1:75760197-75760216 | None:intergenic | 50.0% |
! | ATGGTGTCAGGACCAATCTC+AGG | - | chr2.1:75759182-75759201 | None:intergenic | 50.0% |
! | ATTGTACTGGTGGAGGTCGA+GGG | - | chr2.1:75760196-75760215 | None:intergenic | 50.0% |
! | CCTGGCCCTAGCAATTTTAC+TGG | + | chr2.1:75760929-75760948 | MS.gene00623:CDS | 50.0% |
! | CTCCCAAATTGTACTGGTGG+AGG | - | chr2.1:75760203-75760222 | None:intergenic | 50.0% |
! | GCTTGATCATAGCTCTGCTG+GGG | - | chr2.1:75760458-75760477 | None:intergenic | 50.0% |
! | GCTTGGCCATAGTTCTGTTG+AGG | - | chr2.1:75760356-75760375 | None:intergenic | 50.0% |
! | GTGCTTGATCATAGCTCTGC+TGG | - | chr2.1:75760460-75760479 | None:intergenic | 50.0% |
! | TGCTTTTCGACAGGTTTGCC+CGG | + | chr2.1:75759915-75759934 | MS.gene00623:intron | 50.0% |
! | TGGCCATAGTTCTGTTGAGG+TGG | - | chr2.1:75760353-75760372 | None:intergenic | 50.0% |
!!! | TGGCCAAGGTTTTGTTGTGG+AGG | - | chr2.1:75760389-75760408 | None:intergenic | 50.0% |
AAATTGCTAGGGCCAGGAGG+TGG | - | chr2.1:75760926-75760945 | None:intergenic | 55.0% | |
AGAGTGATCTCAGGCTACGG+CGG | - | chr2.1:75758974-75758993 | None:intergenic | 55.0% | |
ATGCGCCACGGCAGAACTTT+GGG | + | chr2.1:75760657-75760676 | MS.gene00623:CDS | 55.0% | |
CAGTAGCTGAGAAGGAGTGG+TGG | - | chr2.1:75759004-75759023 | None:intergenic | 55.0% | |
CCTGACACCATCCTCTTCGA+AGG | + | chr2.1:75759191-75759210 | MS.gene00623:CDS | 55.0% | |
CCTTCGAAGAGGATGGTGTC+AGG | - | chr2.1:75759194-75759213 | None:intergenic | 55.0% | |
CGAAGTCGCAGTAGCTGAGA+AGG | - | chr2.1:75759012-75759031 | None:intergenic | 55.0% | |
CGGAGAGTGATCTCAGGCTA+CGG | - | chr2.1:75758977-75758996 | None:intergenic | 55.0% | |
CTGTGCCTAGTGAAGGTGGA+TGG | + | chr2.1:75760810-75760829 | MS.gene00623:CDS | 55.0% | |
CTTCTGTCTACTTCTCCCGG+TGG | - | chr2.1:75760683-75760702 | None:intergenic | 55.0% | |
CTTCTTTCTCCTTCTCCCGG+TGG | - | chr2.1:75760632-75760651 | None:intergenic | 55.0% | |
GAACTTTGGACCACTGGGAC+AGG | + | chr2.1:75760772-75760791 | MS.gene00623:CDS | 55.0% | |
GAGGGATTCCCTCGGTTGTT+TGG | - | chr2.1:75760269-75760288 | None:intergenic | 55.0% | |
TAGCTGAGAAGGAGTGGTGG+AGG | - | chr2.1:75759001-75759020 | None:intergenic | 55.0% | |
TATGCGCCACGGCAGAACTT+TGG | + | chr2.1:75760656-75760675 | MS.gene00623:CDS | 55.0% | |
TCGCAGTAGCTGAGAAGGAG+TGG | - | chr2.1:75759007-75759026 | None:intergenic | 55.0% | |
! | TGAGAAGGAGTGGTGGAGGA+CGG | - | chr2.1:75758997-75759016 | None:intergenic | 55.0% |
! | TGATCATAGCTCTGCTGGGG+TGG | - | chr2.1:75760455-75760474 | None:intergenic | 55.0% |
!! | ACAGCAGAGCTTTGGACCAC+CGG | + | chr2.1:75760613-75760632 | MS.gene00623:CDS | 55.0% |
!! | CTCTGCTGTGGTGGATACTG+TGG | - | chr2.1:75760602-75760621 | None:intergenic | 55.0% |
AACGCCGTCGACGACGTTTG+GGG | - | chr2.1:75759087-75759106 | None:intergenic | 60.0% | |
AATGTTGGCCCGCCAGGACA+AGG | + | chr2.1:75760722-75760741 | MS.gene00623:CDS | 60.0% | |
ACGGCAGAACTTTGGGCCAC+CGG | + | chr2.1:75760664-75760683 | MS.gene00623:CDS | 60.0% | |
CAGCAAAATGTTGGCCCGCC+AGG | + | chr2.1:75760716-75760735 | MS.gene00623:CDS | 60.0% | |
CCACTGGGACAGGGAGAAAG+AGG | + | chr2.1:75760782-75760801 | MS.gene00623:CDS | 60.0% | |
CCTCTTTCTCCCTGTCCCAG+TGG | - | chr2.1:75760785-75760804 | None:intergenic | 60.0% | |
CGGGATTCCATGCCAAGGGA+TGG | + | chr2.1:75760299-75760318 | MS.gene00623:CDS | 60.0% | |
CTGTGGCGAAGCAGGACCAT+AGG | - | chr2.1:75760585-75760604 | None:intergenic | 60.0% | |
GAACGCCGTCGACGACGTTT+GGG | - | chr2.1:75759088-75759107 | None:intergenic | 60.0% | |
GGAGGACGGAGAGTGATCTC+AGG | - | chr2.1:75758983-75759002 | None:intergenic | 60.0% | |
GGTCCAAAGCTCTGCTGTGG+TGG | - | chr2.1:75760611-75760630 | None:intergenic | 60.0% | |
GGTGGATACTGTGGCGAAGC+AGG | - | chr2.1:75760593-75760612 | None:intergenic | 60.0% | |
GGTGGTCCAAAGCTCTGCTG+TGG | - | chr2.1:75760614-75760633 | None:intergenic | 60.0% | |
TGAACGCCGTCGACGACGTT+TGG | - | chr2.1:75759089-75759108 | None:intergenic | 60.0% | |
! | GGCGGGCCAACATTTTGCTG+CGG | - | chr2.1:75760716-75760735 | None:intergenic | 60.0% |
!! | AGCTTTGGACCACCGGGAGA+AGG | + | chr2.1:75760620-75760639 | MS.gene00623:CDS | 60.0% |
!! | CAGCAGAGCTTTGGACCACC+GGG | + | chr2.1:75760614-75760633 | MS.gene00623:CDS | 60.0% |
CGGCAGAACTTTGGGCCACC+GGG | + | chr2.1:75760665-75760684 | MS.gene00623:CDS | 65.0% | |
GGTGGCCCAAAGTTCTGCCG+TGG | - | chr2.1:75760665-75760684 | None:intergenic | 65.0% | |
GTGATCTCAGGCTACGGCGG+AGG | - | chr2.1:75758971-75758990 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 75758948 | 75761146 | 75758948 | ID=MS.gene00623 |
chr2.1 | mRNA | 75758948 | 75761146 | 75758948 | ID=MS.gene00623.t1;Parent=MS.gene00623 |
chr2.1 | exon | 75758948 | 75759327 | 75758948 | ID=MS.gene00623.t1.exon1;Parent=MS.gene00623.t1 |
chr2.1 | CDS | 75758948 | 75759327 | 75758948 | ID=cds.MS.gene00623.t1;Parent=MS.gene00623.t1 |
chr2.1 | exon | 75759426 | 75759523 | 75759426 | ID=MS.gene00623.t1.exon2;Parent=MS.gene00623.t1 |
chr2.1 | CDS | 75759426 | 75759523 | 75759426 | ID=cds.MS.gene00623.t1;Parent=MS.gene00623.t1 |
chr2.1 | exon | 75759928 | 75759993 | 75759928 | ID=MS.gene00623.t1.exon3;Parent=MS.gene00623.t1 |
chr2.1 | CDS | 75759928 | 75759993 | 75759928 | ID=cds.MS.gene00623.t1;Parent=MS.gene00623.t1 |
chr2.1 | exon | 75760165 | 75760955 | 75760165 | ID=MS.gene00623.t1.exon4;Parent=MS.gene00623.t1 |
chr2.1 | CDS | 75760165 | 75760955 | 75760165 | ID=cds.MS.gene00623.t1;Parent=MS.gene00623.t1 |
chr2.1 | exon | 75761135 | 75761146 | 75761135 | ID=MS.gene00623.t1.exon5;Parent=MS.gene00623.t1 |
chr2.1 | CDS | 75761135 | 75761146 | 75761135 | ID=cds.MS.gene00623.t1;Parent=MS.gene00623.t1 |
Gene Sequence |
Protein sequence |