Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006487.t1 | XP_003607323.2 | 96.3 | 508 | 19 | 0 | 1 | 508 | 60 | 567 | 8.80E-283 | 982.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006487.t1 | Q9ZPC0 | 56.3 | 529 | 196 | 4 | 1 | 500 | 55 | 577 | 2.4e-164 | 580.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006487.t1 | G7JQL8 | 96.3 | 508 | 19 | 0 | 1 | 508 | 60 | 567 | 6.3e-283 | 982.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052322 | MS.gene006487 | PPI |
| MS.gene031811 | MS.gene006487 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006487.t1 | MTR_4g076520 | 96.260 | 508 | 19 | 0 | 1 | 508 | 60 | 567 | 0.0 | 1005 |
| MS.gene006487.t1 | MTR_7g011400 | 87.678 | 211 | 26 | 0 | 280 | 490 | 21 | 231 | 3.70e-133 | 386 |
| MS.gene006487.t1 | MTR_8g069840 | 32.812 | 192 | 118 | 5 | 22 | 206 | 79 | 266 | 8.72e-18 | 87.8 |
| MS.gene006487.t1 | MTR_8g069840 | 32.812 | 192 | 118 | 5 | 22 | 206 | 79 | 266 | 9.49e-18 | 87.4 |
| MS.gene006487.t1 | MTR_1g095360 | 25.000 | 300 | 210 | 10 | 200 | 488 | 532 | 827 | 1.29e-13 | 73.9 |
| MS.gene006487.t1 | MTR_1g095360 | 25.000 | 300 | 210 | 10 | 200 | 488 | 567 | 862 | 1.54e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006487.t1 | AT1G18870 | 55.899 | 517 | 205 | 5 | 1 | 502 | 51 | 559 | 0.0 | 583 |
| MS.gene006487.t1 | AT1G18870 | 55.899 | 517 | 205 | 5 | 1 | 502 | 1 | 509 | 0.0 | 582 |
| MS.gene006487.t1 | AT1G74710 | 54.808 | 520 | 206 | 5 | 1 | 498 | 48 | 560 | 0.0 | 574 |
| MS.gene006487.t1 | AT1G74710 | 54.440 | 518 | 207 | 5 | 1 | 496 | 48 | 558 | 0.0 | 566 |
| MS.gene006487.t1 | AT1G18870 | 52.805 | 517 | 197 | 6 | 1 | 502 | 51 | 535 | 0.0 | 531 |
| MS.gene006487.t1 | AT1G68890 | 30.952 | 210 | 132 | 5 | 8 | 208 | 67 | 272 | 1.46e-20 | 96.3 |
| MS.gene006487.t1 | AT2G29690 | 27.309 | 249 | 148 | 4 | 269 | 497 | 365 | 600 | 5.96e-14 | 75.1 |
Find 126 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCATCCCACTCCAAGTA+TGG | 0.248367 | 4.1:-27869747 | None:intergenic |
| CATTTATTTGCTCAATTAAC+TGG | 0.264103 | 4.1:+27868738 | MS.gene006487:CDS |
| AGCAACTATTTCACAGAAAA+TGG | 0.276767 | 4.1:+27867718 | MS.gene006487:CDS |
| AGAAAGCATACGAAGAAAAT+TGG | 0.278150 | 4.1:+27867970 | MS.gene006487:CDS |
| GGAAACTTGGTTAGCATTGC+TGG | 0.279230 | 4.1:+27865255 | MS.gene006487:CDS |
| TCATCAGAGTGGATGGCTTT+TGG | 0.282890 | 4.1:+27865688 | MS.gene006487:CDS |
| CGCGTTTCTATCGTCCTAAC+TGG | 0.284030 | 4.1:-27865012 | None:intergenic |
| CCGATAAATGCCGGTGCATT+AGG | 0.301055 | 4.1:-27867008 | None:intergenic |
| CACCCAAGTCCTGCAGTTTG+TGG | 0.304536 | 4.1:+27868898 | MS.gene006487:CDS |
| GCTGGACCTGTTGGTTGGTT+TGG | 0.311172 | 4.1:+27869234 | MS.gene006487:CDS |
| GTTCACTAAGTTACTTAAAC+TGG | 0.317030 | 4.1:+27870038 | MS.gene006487:intron |
| AGACAAGCTAACCACGTTAG+AGG | 0.324370 | 4.1:-27866834 | None:intergenic |
| CTTCTTTACTAGGAATGTTA+TGG | 0.328879 | 4.1:-27866595 | None:intergenic |
| ATCCAATCCCAATAGGAAAA+TGG | 0.334738 | 4.1:-27865312 | None:intergenic |
| GCTTCAACTTGCTCCTCAAT+AGG | 0.339305 | 4.1:-27865153 | None:intergenic |
| CCAAAGCTTCACTAGTGATA+TGG | 0.351321 | 4.1:-27867743 | None:intergenic |
| GGCTATGTACAGTCTCAAAA+TGG | 0.363690 | 4.1:+27865065 | MS.gene006487:CDS |
| CCTAATGCACCGGCATTTAT+CGG | 0.372337 | 4.1:+27867008 | MS.gene006487:CDS |
| AGATTCCAATCTTCTTTACT+AGG | 0.376208 | 4.1:-27866605 | None:intergenic |
| GCAAATAAATGTTGGATCCT+TGG | 0.384897 | 4.1:-27868726 | None:intergenic |
| GCAATGCTAACCAAGTTTCC+AGG | 0.385429 | 4.1:-27865252 | None:intergenic |
| TGCTTACCACTACTATTGCT+TGG | 0.388809 | 4.1:+27866119 | MS.gene006487:CDS |
| GGACCTGTTGGTTGGTTTGG+AGG | 0.393014 | 4.1:+27869237 | MS.gene006487:CDS |
| ATTGGGATTGGATATCTATA+AGG | 0.399903 | 4.1:+27865322 | MS.gene006487:CDS |
| ATGCCAGATGAGGTACAAAA+TGG | 0.404784 | 4.1:-27865114 | None:intergenic |
| TGGTCCTCTAGCACGGGTTC+CGG | 0.410896 | 4.1:-27867766 | None:intergenic |
| GTGAGTTTGCCGTTGGCATC+AGG | 0.415994 | 4.1:+27869268 | MS.gene006487:CDS |
| GAAATCTTGCCCTGGAAACT+TGG | 0.418146 | 4.1:+27865242 | MS.gene006487:CDS |
| CAGGTCAGCATTGGTGGAAC+AGG | 0.418978 | 4.1:+27869287 | MS.gene006487:CDS |
| TGCCCTTTGATTCGCGCATA+TGG | 0.422545 | 4.1:+27865634 | MS.gene006487:CDS |
| AGCAAGTTGAAGCAATTGAT+TGG | 0.422787 | 4.1:+27865163 | MS.gene006487:CDS |
| CTTCCTAGATGCTACTTCTC+TGG | 0.424133 | 4.1:+27865210 | MS.gene006487:CDS |
| TTTCTGTGAAATAGTTGCTC+TGG | 0.426610 | 4.1:-27867714 | None:intergenic |
| TCAATGAATGGTTGTAAAGA+AGG | 0.426979 | 4.1:+27864964 | None:intergenic |
| TTTCTACTTCATGATTCCTC+AGG | 0.428813 | 4.1:+27865714 | MS.gene006487:CDS |
| GCTTACCACTACTATTGCTT+GGG | 0.431278 | 4.1:+27866120 | MS.gene006487:CDS |
| GGAAGGAAGCAACCCATACT+TGG | 0.437293 | 4.1:+27869734 | MS.gene006487:CDS |
| TATAGATATCCAATCCCAAT+AGG | 0.437928 | 4.1:-27865319 | None:intergenic |
| GTAAGTCAAGTTCAATTTGA+CGG | 0.442874 | 4.1:-27867803 | None:intergenic |
| CCATATCACTAGTGAAGCTT+TGG | 0.446524 | 4.1:+27867743 | MS.gene006487:CDS |
| GTTGAGTTTAATGAGCTTGA+AGG | 0.447276 | 4.1:+27866088 | MS.gene006487:CDS |
| GGATGCTACCTTTCAATGAA+TGG | 0.448779 | 4.1:+27864952 | None:intergenic |
| AAAACTTGTGCCTCTTCTGT+TGG | 0.455039 | 4.1:-27868925 | None:intergenic |
| CTTGGGATAATGATCTTTGT+TGG | 0.458807 | 4.1:+27866137 | MS.gene006487:CDS |
| GCTTTGATATATGCTGGAAC+TGG | 0.459668 | 4.1:+27869705 | MS.gene006487:CDS |
| AAGCCACAAACTGCAGGACT+TGG | 0.460419 | 4.1:-27868901 | None:intergenic |
| TCTTTGTTGGTCGTGGGAAA+AGG | 0.461435 | 4.1:+27866150 | MS.gene006487:CDS |
| GAGAGTTGAGGTTCCTATTG+AGG | 0.466956 | 4.1:+27865140 | MS.gene006487:CDS |
| AAAGTTCAAGAGAACCAGTT+AGG | 0.471129 | 4.1:+27864998 | MS.gene006487:CDS |
| AATGTTGGAGGAGCTTGCTT+AGG | 0.475322 | 4.1:-27866560 | None:intergenic |
| GCCATTGCAGCTGATGCTAC+TGG | 0.478778 | 4.1:-27865045 | None:intergenic |
| TGGCATCAGGTCAGCATTGG+TGG | 0.478970 | 4.1:+27869281 | MS.gene006487:CDS |
| CCTCCTCCAAACCAACCAAC+AGG | 0.481639 | 4.1:-27869240 | None:intergenic |
| CCTCCATATGCGCGAATCAA+AGG | 0.481748 | 4.1:-27865637 | None:intergenic |
| CCTGTTGGTTGGTTTGGAGG+AGG | 0.487475 | 4.1:+27869240 | MS.gene006487:CDS |
| ACATTCCTAGTAAAGAAGAT+TGG | 0.489547 | 4.1:+27866600 | MS.gene006487:CDS |
| CTAGGTGCTTTGATATATGC+TGG | 0.491160 | 4.1:+27869699 | MS.gene006487:CDS |
| CGTTGGCATCAGGTCAGCAT+TGG | 0.491560 | 4.1:+27869278 | MS.gene006487:CDS |
| GTAAACTCAATGTCGTCCTT+CGG | 0.493229 | 4.1:-27867938 | None:intergenic |
| TGGCTGCTTAATATCAATGT+TGG | 0.498602 | 4.1:-27866575 | None:intergenic |
| TTAATTGAGCAAATAAATGT+TGG | 0.499910 | 4.1:-27868734 | None:intergenic |
| GTTAAGAAACGAAGAGGATG+AGG | 0.505866 | 4.1:+27868764 | MS.gene006487:CDS |
| TTGGTTAGCATTGCTGGTGT+TGG | 0.507263 | 4.1:+27865261 | MS.gene006487:CDS |
| TCAAAACGATTGTAGGTTGA+AGG | 0.507970 | 4.1:+27866954 | MS.gene006487:intron |
| CTCCATATGCGCGAATCAAA+GGG | 0.510017 | 4.1:-27865636 | None:intergenic |
| GCTAGAACTCAAAACATCTC+AGG | 0.519609 | 4.1:+27869767 | MS.gene006487:CDS |
| TTGCCAGAGAAGTAGCATCT+AGG | 0.520561 | 4.1:-27865213 | None:intergenic |
| CTGCTTAATATCAATGTTGG+AGG | 0.521541 | 4.1:-27866572 | None:intergenic |
| ATATGCTGGAACTGGAATAG+TGG | 0.522449 | 4.1:+27869713 | MS.gene006487:CDS |
| ACCAGTAGCATCAGCTGCAA+TGG | 0.522993 | 4.1:+27865044 | MS.gene006487:CDS |
| CTAGTGATGGTCCTCTAGCA+CGG | 0.525024 | 4.1:-27867773 | None:intergenic |
| TTCGCAGGCAGTCTGCGAAA+AGG | 0.530662 | 4.1:+27868668 | MS.gene006487:intron |
| TGTATGCTGGACCTGTTGGT+TGG | 0.531912 | 4.1:+27869229 | MS.gene006487:CDS |
| ATAATGATCTTTGTTGGTCG+TGG | 0.536372 | 4.1:+27866143 | MS.gene006487:CDS |
| TAATGATCTTTGTTGGTCGT+GGG | 0.538149 | 4.1:+27866144 | MS.gene006487:CDS |
| GTTGGAAAGCCACAAACTGC+AGG | 0.539573 | 4.1:-27868907 | None:intergenic |
| TATTTGCTCAATTAACTGGA+AGG | 0.540497 | 4.1:+27868742 | MS.gene006487:CDS |
| AAATGGCTGTGACTGCGAAA+AGG | 0.540950 | 4.1:-27865295 | None:intergenic |
| CCTTCAGCCACCTAATGCAC+CGG | 0.546354 | 4.1:+27866998 | MS.gene006487:CDS |
| TAATGTTTCATCAGAGTGGA+TGG | 0.547863 | 4.1:+27865681 | MS.gene006487:CDS |
| TTGGCCGGAACCCGTGCTAG+AGG | 0.556180 | 4.1:+27867762 | MS.gene006487:CDS |
| GCTCATCCCACTCCAAGTAT+GGG | 0.558587 | 4.1:-27869746 | None:intergenic |
| TTGAACTTGACTTACTTACC+AGG | 0.562261 | 4.1:+27867811 | MS.gene006487:CDS |
| GGCGAGAGTGAGTTTGCCGT+TGG | 0.562594 | 4.1:+27869261 | MS.gene006487:CDS |
| ATCACTAGTGAAGCTTTGGC+CGG | 0.564206 | 4.1:+27867747 | MS.gene006487:CDS |
| TTTGATCGAGGGATGTATGC+TGG | 0.570243 | 4.1:+27869216 | MS.gene006487:CDS |
| AGAGGATTGATATTTACAGT+AGG | 0.570825 | 4.1:-27866816 | None:intergenic |
| GTTCAGAAGTGTTTGATCGA+GGG | 0.574223 | 4.1:+27869205 | MS.gene006487:intron |
| TAGTGATGGTCCTCTAGCAC+GGG | 0.574761 | 4.1:-27867772 | None:intergenic |
| TTGTGGCTTTCCAACAGAAG+AGG | 0.579808 | 4.1:+27868915 | MS.gene006487:CDS |
| TGTTTCTTGAAGTGCCGCGA+TGG | 0.581100 | 4.1:-27866173 | None:intergenic |
| AGCCACAAACTGCAGGACTT+GGG | 0.581443 | 4.1:-27868900 | None:intergenic |
| ACTGTGTTTCCGATAAATGC+CGG | 0.585235 | 4.1:-27867017 | None:intergenic |
| AAGCATACGAAGAAAATTGG+AGG | 0.588895 | 4.1:+27867973 | MS.gene006487:CDS |
| GCTGGAACTGGAATAGTGGA+AGG | 0.595266 | 4.1:+27869717 | MS.gene006487:CDS |
| AACGTGGTTAGCTTGTCTAA+AGG | 0.599085 | 4.1:+27866839 | MS.gene006487:CDS |
| GGGATGTATGCTGGACCTGT+TGG | 0.600180 | 4.1:+27869225 | MS.gene006487:CDS |
| CAATGCTAACCAAGTTTCCA+GGG | 0.601314 | 4.1:-27865251 | None:intergenic |
| CCTTTGATTCGCGCATATGG+AGG | 0.602449 | 4.1:+27865637 | MS.gene006487:CDS |
| AAACGATTGTAGGTTGAAGG+TGG | 0.602926 | 4.1:+27866957 | MS.gene006487:intron |
| GAAGCAACCCATACTTGGAG+TGG | 0.603898 | 4.1:+27869739 | MS.gene006487:CDS |
| TGTTCAGAAGTGTTTGATCG+AGG | 0.604089 | 4.1:+27869204 | MS.gene006487:intron |
| ATAAATGCCGGTGCATTAGG+TGG | 0.604297 | 4.1:-27867005 | None:intergenic |
| AGTAGCATCTAGGAAGCAGA+AGG | 0.604523 | 4.1:-27865203 | None:intergenic |
| GAGTTTAATGAGCTTGAAGG+AGG | 0.605355 | 4.1:+27866091 | MS.gene006487:CDS |
| TGTAGTTACCTTGGTAAGTG+AGG | 0.606511 | 4.1:-27866669 | None:intergenic |
| AAGGAACAGAAATCTTGCCC+TGG | 0.617216 | 4.1:+27865234 | MS.gene006487:CDS |
| GGGATTGGATATCTATAAGG+AGG | 0.620357 | 4.1:+27865325 | MS.gene006487:CDS |
| AGCATCTAGGAAGCAGAAGG+TGG | 0.620967 | 4.1:-27865200 | None:intergenic |
| AAGCAACCCATACTTGGAGT+GGG | 0.621209 | 4.1:+27869740 | MS.gene006487:CDS |
| CCGGTGCATTAGGTGGCTGA+AGG | 0.623228 | 4.1:-27866998 | None:intergenic |
| AAGCTAATGTTTCATCAGAG+TGG | 0.624786 | 4.1:+27865677 | MS.gene006487:CDS |
| CAATGCTGACCTGATGCCAA+CGG | 0.626025 | 4.1:-27869277 | None:intergenic |
| AACTCTCACTATGCCAGATG+AGG | 0.629562 | 4.1:-27865124 | None:intergenic |
| AAATGATTCCTCACTTACCA+AGG | 0.633006 | 4.1:+27866661 | MS.gene006487:CDS |
| AAACTCAGGTTGTTCTAGCG+CGG | 0.633096 | 4.1:+27866778 | MS.gene006487:intron |
| TTGCTTAGGAAACTTTACAA+TGG | 0.633615 | 4.1:-27866546 | None:intergenic |
| TGACGGTCTAGTGCTAGTGA+TGG | 0.637405 | 4.1:-27867786 | None:intergenic |
| TGGAAGGTTAAGAAACGAAG+AGG | 0.647415 | 4.1:+27868758 | MS.gene006487:CDS |
| ATCTGGCATAGTGAGAGTTG+AGG | 0.648266 | 4.1:+27865128 | MS.gene006487:CDS |
| TAGATGCTACTTCTCTGGCA+AGG | 0.649242 | 4.1:+27865215 | MS.gene006487:CDS |
| AAATGATTAGAAAACTGCCA+AGG | 0.653684 | 4.1:+27868709 | MS.gene006487:CDS |
| ATTATCCCAAGCAATAGTAG+TGG | 0.661694 | 4.1:-27866125 | None:intergenic |
| GTCGTGGGAAAAGGCCATCG+CGG | 0.682263 | 4.1:+27866159 | MS.gene006487:CDS |
| ATTGCAGCTGATGCTACTGG+TGG | 0.696479 | 4.1:-27865042 | None:intergenic |
| TAAATATCAATCCTCTAACG+TGG | 0.724878 | 4.1:+27866823 | MS.gene006487:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTATGTTTTATAAATTT+TGG | + | chr4.1:27867454-27867473 | MS.gene006487:intron | 10.0% |
| !!! | TTATTTTTTTTCTTTCTTTT+TGG | + | chr4.1:27867906-27867925 | MS.gene006487:intron | 10.0% |
| !! | AAATAGTATGTAATAAGAAT+AGG | - | chr4.1:27867353-27867372 | None:intergenic | 15.0% |
| !! | AATAAAAAACATATATGCAT+AGG | - | chr4.1:27869041-27869060 | None:intergenic | 15.0% |
| !! | ACTTATATGATAAATGTTTA+TGG | + | chr4.1:27866435-27866454 | MS.gene006487:intron | 15.0% |
| !! | CAAGTTCATAAAAATTAAAA+TGG | - | chr4.1:27867686-27867705 | None:intergenic | 15.0% |
| !! | TCATAATATAGTTTCAAAAA+AGG | - | chr4.1:27867501-27867520 | None:intergenic | 15.0% |
| !!! | AATCTTCAATTTTTTTTTAC+CGG | + | chr4.1:27869628-27869647 | MS.gene006487:intron | 15.0% |
| !!! | ATGAATTTGTTAACTATATT+TGG | + | chr4.1:27865388-27865407 | MS.gene006487:intron | 15.0% |
| !!! | ATTTTTATACTTTTCATTGT+TGG | + | chr4.1:27868003-27868022 | MS.gene006487:intron | 15.0% |
| !!! | CATCATAGTTTTATAAATTT+TGG | + | chr4.1:27867533-27867552 | MS.gene006487:intron | 15.0% |
| !!! | TATTTTAGAAATTCAAAATG+TGG | + | chr4.1:27869057-27869076 | MS.gene006487:intron | 15.0% |
| !!! | TTGTAATTTTAATACATTCA+AGG | + | chr4.1:27865965-27865984 | MS.gene006487:intron | 15.0% |
| !! | AAAATATTATCGTATCTACT+AGG | + | chr4.1:27869428-27869447 | MS.gene006487:intron | 20.0% |
| !! | AACTAACTTCATAAATTTCA+AGG | - | chr4.1:27865366-27865385 | None:intergenic | 20.0% |
| !! | AATTGATGTCTTCAAAAAAA+GGG | - | chr4.1:27868195-27868214 | None:intergenic | 20.0% |
| !! | ATATCTTAAAAGTCATCATA+AGG | + | chr4.1:27867520-27867539 | MS.gene006487:intron | 20.0% |
| !! | ATTAGAAAATAAGTCATGTT+TGG | + | chr4.1:27865500-27865519 | MS.gene006487:intron | 20.0% |
| !! | ATTGTCCTTACTATAAAATA+CGG | + | chr4.1:27869181-27869200 | MS.gene006487:intron | 20.0% |
| !! | GAAATTGTGAATTTAGAAAT+GGG | - | chr4.1:27868260-27868279 | None:intergenic | 20.0% |
| !! | GTGTTATCTTAAATAAAATG+CGG | + | chr4.1:27866909-27866928 | MS.gene006487:intron | 20.0% |
| !! | TAAATGACAACTTAGTTATA+TGG | - | chr4.1:27868851-27868870 | None:intergenic | 20.0% |
| !! | TAATTGATGTCTTCAAAAAA+AGG | - | chr4.1:27868196-27868215 | None:intergenic | 20.0% |
| !! | TCAGAATATAGTTTCAAAAA+AGG | - | chr4.1:27867632-27867651 | None:intergenic | 20.0% |
| !! | TTAATTGAGCAAATAAATGT+TGG | - | chr4.1:27868737-27868756 | None:intergenic | 20.0% |
| !!! | AATTGGTTGATTTATAATAG+CGG | + | chr4.1:27869505-27869524 | MS.gene006487:intron | 20.0% |
| !!! | AATTTTTAGAATTAAGCTGT+TGG | + | chr4.1:27868472-27868491 | MS.gene006487:intron | 20.0% |
| !!! | AGTTTTCTAATCATTTTCTT+TGG | - | chr4.1:27868705-27868724 | None:intergenic | 20.0% |
| !!! | ATATAAAAACTGCTGTTTTA+TGG | + | chr4.1:27867858-27867877 | MS.gene006487:intron | 20.0% |
| !!! | CGATAATATTTTATACTACT+TGG | - | chr4.1:27869420-27869439 | None:intergenic | 20.0% |
| !!! | GTACAATGATATTTGTTTTT+AGG | + | chr4.1:27868150-27868169 | MS.gene006487:intron | 20.0% |
| !!! | GTCTTTTGTTACTAATTTTA+TGG | - | chr4.1:27865929-27865948 | None:intergenic | 20.0% |
| !!! | GTTTTCCTTATTTACTATTT+TGG | - | chr4.1:27868410-27868429 | None:intergenic | 20.0% |
| !!! | TACATGTACTTTTTTTTTTG+CGG | - | chr4.1:27869889-27869908 | None:intergenic | 20.0% |
| !!! | TAGATTTTCTTTAGATTATC+AGG | + | chr4.1:27866467-27866486 | MS.gene006487:intron | 20.0% |
| !!! | TTAATTGAGATCCTATTTTT+TGG | + | chr4.1:27869471-27869490 | MS.gene006487:intron | 20.0% |
| !!! | TTGTGAACTATCTATATTTT+GGG | - | chr4.1:27865455-27865474 | None:intergenic | 20.0% |
| !!! | TTTGTGAACTATCTATATTT+TGG | - | chr4.1:27865456-27865475 | None:intergenic | 20.0% |
| !!! | TTTTGTCTATGTTCAAAAAT+GGG | - | chr4.1:27869134-27869153 | None:intergenic | 20.0% |
| !!! | TTTTTGTCTATGTTCAAAAA+TGG | - | chr4.1:27869135-27869154 | None:intergenic | 20.0% |
| ! | AAAATATCAAATAGTAGCTG+TGG | - | chr4.1:27865571-27865590 | None:intergenic | 25.0% |
| ! | AAATAAAAATCACAAGCATC+AGG | - | chr4.1:27867892-27867911 | None:intergenic | 25.0% |
| ! | AAATAGGATCTCAATTAACT+TGG | - | chr4.1:27869469-27869488 | None:intergenic | 25.0% |
| ! | AAATGAGTAAATCATCAGTT+TGG | - | chr4.1:27866023-27866042 | None:intergenic | 25.0% |
| ! | AAATTCATCACATAGAAACA+AGG | - | chr4.1:27868457-27868476 | None:intergenic | 25.0% |
| ! | AACAAAATCTAACGTACATT+AGG | - | chr4.1:27868052-27868071 | None:intergenic | 25.0% |
| ! | AATAAAAATCACAAGCATCA+GGG | - | chr4.1:27867891-27867910 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | chr4.1:27866313-27866332 | None:intergenic | 25.0% |
| ! | ACATGTATCTGATTCAAATT+TGG | - | chr4.1:27869918-27869937 | None:intergenic | 25.0% |
| ! | ACTAAGGAAAGAAACATTTA+GGG | - | chr4.1:27865833-27865852 | None:intergenic | 25.0% |
| ! | AGAACAAGTAGGAAAATATT+TGG | - | chr4.1:27869003-27869022 | None:intergenic | 25.0% |
| ! | AGTAACAAAAGACATAACTA+AGG | + | chr4.1:27865936-27865955 | MS.gene006487:intron | 25.0% |
| ! | ATCATGTGAAATTCATTATG+TGG | - | chr4.1:27867415-27867434 | None:intergenic | 25.0% |
| ! | CAATATCATCGAAATGTATA+GGG | - | chr4.1:27868318-27868337 | None:intergenic | 25.0% |
| ! | CATTTATTTGCTCAATTAAC+TGG | + | chr4.1:27868738-27868757 | MS.gene006487:CDS | 25.0% |
| ! | CTTGTAATAAAGTCAAAGTT+AGG | + | chr4.1:27869085-27869104 | MS.gene006487:intron | 25.0% |
| ! | GATTTACTCATTTATAGCAT+TGG | + | chr4.1:27866030-27866049 | MS.gene006487:intron | 25.0% |
| ! | GGAAATTGTGAATTTAGAAA+TGG | - | chr4.1:27868261-27868280 | None:intergenic | 25.0% |
| ! | TAGTAAATAAGGAAAACTAG+AGG | + | chr4.1:27868413-27868432 | MS.gene006487:intron | 25.0% |
| ! | TCAATATCATCGAAATGTAT+AGG | - | chr4.1:27868319-27868338 | None:intergenic | 25.0% |
| ! | TGTTCTTTCCAAAACTAATT+TGG | + | chr4.1:27865748-27865767 | MS.gene006487:intron | 25.0% |
| ! | TTAGGTGATATTGATATGTT+TGG | + | chr4.1:27869103-27869122 | MS.gene006487:intron | 25.0% |
| ! | TTGAAATTGAAATGCTTATG+TGG | + | chr4.1:27868335-27868354 | MS.gene006487:intron | 25.0% |
| ! | TTGACGGAGAAAAAAAAAAA+AGG | - | chr4.1:27866881-27866900 | None:intergenic | 25.0% |
| !! | AAAGCATTAACAGTTTGATT+CGG | - | chr4.1:27865430-27865449 | None:intergenic | 25.0% |
| !! | AACATCTGTTGTTTGAAATA+CGG | + | chr4.1:27869388-27869407 | MS.gene006487:intron | 25.0% |
| !! | ACATTTGCAAGTTTTCATAT+AGG | + | chr4.1:27869674-27869693 | MS.gene006487:intron | 25.0% |
| !! | ATATGTTTTCTTTTGAACCA+GGG | + | chr4.1:27867315-27867334 | MS.gene006487:intron | 25.0% |
| !! | ATGTGAATGCATACATATTT+TGG | + | chr4.1:27869795-27869814 | MS.gene006487:intron | 25.0% |
| !! | GTTGAAAATTTTCACTTTGA+AGG | + | chr4.1:27865596-27865615 | MS.gene006487:intron | 25.0% |
| !! | TATATGTTTTCTTTTGAACC+AGG | + | chr4.1:27867314-27867333 | MS.gene006487:intron | 25.0% |
| !! | TTTTTACTTGAACTGTAACA+TGG | - | chr4.1:27868793-27868812 | None:intergenic | 25.0% |
| !!! | ATCTCATGCTTTTTCTTTAT+TGG | + | chr4.1:27866691-27866710 | MS.gene006487:intron | 25.0% |
| !!! | GAGTATTGAGATACTAATAA+TGG | - | chr4.1:27869603-27869622 | None:intergenic | 25.0% |
| AAACAACGATGTATGGAAAA+TGG | - | chr4.1:27868971-27868990 | None:intergenic | 30.0% | |
| AAACACATTCAAGACTGTTT+GGG | + | chr4.1:27866257-27866276 | MS.gene006487:intron | 30.0% | |
| AAATGATTAGAAAACTGCCA+AGG | + | chr4.1:27868709-27868728 | MS.gene006487:CDS | 30.0% | |
| AAGCATTAACAGTTTGATTC+GGG | - | chr4.1:27865429-27865448 | None:intergenic | 30.0% | |
| AAGTTGTATTATGTAACCCT+AGG | + | chr4.1:27867187-27867206 | MS.gene006487:intron | 30.0% | |
| ACATTCCTAGTAAAGAAGAT+TGG | + | chr4.1:27866600-27866619 | MS.gene006487:CDS | 30.0% | |
| ACTTTGCAAAGTAAGTGTTA+GGG | + | chr4.1:27866195-27866214 | MS.gene006487:intron | 30.0% | |
| AGAGGATTGATATTTACAGT+AGG | - | chr4.1:27866819-27866838 | None:intergenic | 30.0% | |
| AGATTCCAATCTTCTTTACT+AGG | - | chr4.1:27866608-27866627 | None:intergenic | 30.0% | |
| AGCAACTATTTCACAGAAAA+TGG | + | chr4.1:27867718-27867737 | MS.gene006487:CDS | 30.0% | |
| ATACCCGACATAAAAAGATA+AGG | - | chr4.1:27867086-27867105 | None:intergenic | 30.0% | |
| ATTGGGATTGGATATCTATA+AGG | + | chr4.1:27865322-27865341 | MS.gene006487:CDS | 30.0% | |
| CACTAAGGAAAGAAACATTT+AGG | - | chr4.1:27865834-27865853 | None:intergenic | 30.0% | |
| CTCATAGTTTACTGATAAGT+GGG | + | chr4.1:27867116-27867135 | MS.gene006487:intron | 30.0% | |
| CTTAAATAAAATGCGGTAGA+AGG | + | chr4.1:27866916-27866935 | MS.gene006487:intron | 30.0% | |
| CTTCTTTACTAGGAATGTTA+TGG | - | chr4.1:27866598-27866617 | None:intergenic | 30.0% | |
| GAAAATAAGTCATGTTTGGT+TGG | + | chr4.1:27865504-27865523 | MS.gene006487:intron | 30.0% | |
| GAAGAAAATGAGCTTTCAAA+TGG | - | chr4.1:27866747-27866766 | None:intergenic | 30.0% | |
| GGATTATACATAATAGCATG+AGG | - | chr4.1:27868498-27868517 | None:intergenic | 30.0% | |
| GTAAGTCAAGTTCAATTTGA+CGG | - | chr4.1:27867806-27867825 | None:intergenic | 30.0% | |
| GTATACATCAAAACGATTGT+AGG | + | chr4.1:27866947-27866966 | MS.gene006487:intron | 30.0% | |
| GTATTAGAAACAACGATGTA+TGG | - | chr4.1:27868978-27868997 | None:intergenic | 30.0% | |
| GTTCACTAAGTTACTTAAAC+TGG | + | chr4.1:27870038-27870057 | MS.gene006487:intron | 30.0% | |
| TAAACACATTCAAGACTGTT+TGG | + | chr4.1:27866256-27866275 | MS.gene006487:intron | 30.0% | |
| TAAATATCAATCCTCTAACG+TGG | + | chr4.1:27866823-27866842 | MS.gene006487:CDS | 30.0% | |
| TACCCGACATAAAAAGATAA+GGG | - | chr4.1:27867085-27867104 | None:intergenic | 30.0% | |
| TATAATAGGCATGCAATAGA+TGG | + | chr4.1:27868107-27868126 | MS.gene006487:intron | 30.0% | |
| TATAGATATCCAATCCCAAT+AGG | - | chr4.1:27865322-27865341 | None:intergenic | 30.0% | |
| TATTTGCTCAATTAACTGGA+AGG | + | chr4.1:27868742-27868761 | MS.gene006487:CDS | 30.0% | |
| TCAAAAAAGTCAATCCAAAC+AGG | - | chr4.1:27866221-27866240 | None:intergenic | 30.0% | |
| TCATAAATTTCAAGGAACCA+AGG | - | chr4.1:27865358-27865377 | None:intergenic | 30.0% | |
| TCCTTGGATACTGATATAAT+AGG | + | chr4.1:27868093-27868112 | MS.gene006487:intron | 30.0% | |
| TCTTAAAAGTCATCATAAGG+AGG | + | chr4.1:27867602-27867621 | MS.gene006487:intron | 30.0% | |
| TTGCTTAGGAAACTTTACAA+TGG | - | chr4.1:27866549-27866568 | None:intergenic | 30.0% | |
| ! | ACACCCTTATCTTTTTATGT+CGG | + | chr4.1:27867079-27867098 | MS.gene006487:intron | 30.0% |
| ! | AGAAAGCATACGAAGAAAAT+TGG | + | chr4.1:27867970-27867989 | MS.gene006487:CDS | 30.0% |
| ! | ATTTTCTATTATCCAAGCCT+AGG | - | chr4.1:27867207-27867226 | None:intergenic | 30.0% |
| ! | CAAGTTTTCATATAGGAACT+AGG | + | chr4.1:27869681-27869700 | MS.gene006487:intron | 30.0% |
| ! | CTCATTTTCTTCTTCCATAT+TGG | + | chr4.1:27866755-27866774 | MS.gene006487:intron | 30.0% |
| ! | CTTTGTCTCAATCACAATTT+TGG | + | chr4.1:27868231-27868250 | MS.gene006487:intron | 30.0% |
| ! | GAACACCGTATTTTATAGTA+AGG | - | chr4.1:27869189-27869208 | None:intergenic | 30.0% |
| ! | GTGTCTTTTGTTAGTTAGTT+TGG | + | chr4.1:27865870-27865889 | MS.gene006487:intron | 30.0% |
| ! | TATCTTTTTATGTCGGGTAT+GGG | + | chr4.1:27867086-27867105 | MS.gene006487:intron | 30.0% |
| ! | TCCATCCACAATTTTCAAAA+TGG | + | chr4.1:27868278-27868297 | MS.gene006487:intron | 30.0% |
| ! | TTAGGCTTGAATCACAATTT+TGG | + | chr4.1:27868168-27868187 | MS.gene006487:intron | 30.0% |
| ! | TTATCTTTTTATGTCGGGTA+TGG | + | chr4.1:27867085-27867104 | MS.gene006487:intron | 30.0% |
| ! | TTTTCCTACTTGTTCTTGAA+AGG | + | chr4.1:27869007-27869026 | MS.gene006487:intron | 30.0% |
| ! | TTTTCTATTATCCAAGCCTA+GGG | - | chr4.1:27867206-27867225 | None:intergenic | 30.0% |
| !! | AAGTAAACTCTGAAATTTCC+AGG | + | chr4.1:27869565-27869584 | MS.gene006487:intron | 30.0% |
| !! | AGAACACTCAAATTTTAGCA+TGG | - | chr4.1:27867277-27867296 | None:intergenic | 30.0% |
| !! | GTCATCCATTTTGAAAATTG+TGG | - | chr4.1:27868286-27868305 | None:intergenic | 30.0% |
| !! | TAATGGATTACTGAAATTCC+TGG | - | chr4.1:27869586-27869605 | None:intergenic | 30.0% |
| !! | TCCATTTTGAAAATTGTGGA+TGG | - | chr4.1:27868282-27868301 | None:intergenic | 30.0% |
| !! | TTGAAGGACCAAATTAGTTT+TGG | - | chr4.1:27865759-27865778 | None:intergenic | 30.0% |
| !!! | ATGTTTTTTCCTCAAATCCT+TGG | + | chr4.1:27868077-27868096 | MS.gene006487:intron | 30.0% |
| !!! | ATTAGTTTTGGAAAGAACAC+AGG | - | chr4.1:27865747-27865766 | None:intergenic | 30.0% |
| !!! | CATTAGCTTTTGCATTGAAA+CGG | - | chr4.1:27865666-27865685 | None:intergenic | 30.0% |
| !!! | TCAACCTGTCAATTTTTTCT+CGG | - | chr4.1:27866073-27866092 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGGAAAGAACACA+GGG | - | chr4.1:27865746-27865765 | None:intergenic | 30.0% |
| AAAGTTCAAGAGAACCAGTT+AGG | + | chr4.1:27864998-27865017 | MS.gene006487:CDS | 35.0% | |
| AAATGATTCCTCACTTACCA+AGG | + | chr4.1:27866661-27866680 | MS.gene006487:CDS | 35.0% | |
| AACAACCTGAGTTTCCAATA+TGG | - | chr4.1:27866772-27866791 | None:intergenic | 35.0% | |
| AAGCATACGAAGAAAATTGG+AGG | + | chr4.1:27867973-27867992 | MS.gene006487:CDS | 35.0% | |
| AAGCTAATGTTTCATCAGAG+TGG | + | chr4.1:27865677-27865696 | MS.gene006487:CDS | 35.0% | |
| AAGTCCTTTCAAGAACAAGT+AGG | - | chr4.1:27869014-27869033 | None:intergenic | 35.0% | |
| AATCTTCCTAGTCACATACA+TGG | - | chr4.1:27867050-27867069 | None:intergenic | 35.0% | |
| ACTATGCATCTTTGTATTGC+AGG | + | chr4.1:27866514-27866533 | MS.gene006487:intron | 35.0% | |
| ACTTCCAAAGTTCCAATCTA+GGG | - | chr4.1:27868523-27868542 | None:intergenic | 35.0% | |
| AGGGGCCAAAATAGTAAATA+AGG | + | chr4.1:27868402-27868421 | MS.gene006487:intron | 35.0% | |
| AGTTTACTGATAAGTGGGTA+TGG | + | chr4.1:27867121-27867140 | MS.gene006487:intron | 35.0% | |
| ATAATGATCTTTGTTGGTCG+TGG | + | chr4.1:27866143-27866162 | MS.gene006487:CDS | 35.0% | |
| ATCATCGAAATGTATAGGGT+GGG | - | chr4.1:27868314-27868333 | None:intergenic | 35.0% | |
| ATCCAATCCCAATAGGAAAA+TGG | - | chr4.1:27865315-27865334 | None:intergenic | 35.0% | |
| ATGATTGTAAGCAGATGCAA+TGG | - | chr4.1:27868595-27868614 | None:intergenic | 35.0% | |
| ATGTCACATTCAGTTTGCAT+AGG | + | chr4.1:27869332-27869351 | MS.gene006487:intron | 35.0% | |
| ATTATCCCAAGCAATAGTAG+TGG | - | chr4.1:27866128-27866147 | None:intergenic | 35.0% | |
| ATTCATCATCCTGTTAACCT+AGG | - | chr4.1:27868628-27868647 | None:intergenic | 35.0% | |
| ATTCGTGGTAAAAAACAGTC+CGG | - | chr4.1:27869650-27869669 | None:intergenic | 35.0% | |
| CACTTTGCAAAGTAAGTGTT+AGG | + | chr4.1:27866194-27866213 | MS.gene006487:intron | 35.0% | |
| CATTCTGCAGTTGGATATAT+AGG | + | chr4.1:27867236-27867255 | MS.gene006487:intron | 35.0% | |
| CTATATATCCAACTGCAGAA+TGG | - | chr4.1:27867238-27867257 | None:intergenic | 35.0% | |
| CTGCTTAATATCAATGTTGG+AGG | - | chr4.1:27866575-27866594 | None:intergenic | 35.0% | |
| CTTGCAAATGTTATGATTCG+TGG | - | chr4.1:27869665-27869684 | None:intergenic | 35.0% | |
| CTTGGGATAATGATCTTTGT+TGG | + | chr4.1:27866137-27866156 | MS.gene006487:CDS | 35.0% | |
| CTTGTTCGTCTCCAAAAAAT+AGG | - | chr4.1:27869485-27869504 | None:intergenic | 35.0% | |
| GATAACACTGCTGAATTTGA+CGG | - | chr4.1:27866897-27866916 | None:intergenic | 35.0% | |
| GCAAATAAATGTTGGATCCT+TGG | - | chr4.1:27868729-27868748 | None:intergenic | 35.0% | |
| GCCTATTATATCAGTATCCA+AGG | - | chr4.1:27868097-27868116 | None:intergenic | 35.0% | |
| GCTCATAGTTTACTGATAAG+TGG | + | chr4.1:27867115-27867134 | MS.gene006487:intron | 35.0% | |
| GTTGAGTTTAATGAGCTTGA+AGG | + | chr4.1:27866088-27866107 | MS.gene006487:CDS | 35.0% | |
| GTTTCTTTCCTTAGTGAGTT+TGG | + | chr4.1:27865838-27865857 | MS.gene006487:intron | 35.0% | |
| TAACACGTTTGACACATTGA+AGG | - | chr4.1:27865775-27865794 | None:intergenic | 35.0% | |
| TAATGATCTTTGTTGGTCGT+GGG | + | chr4.1:27866144-27866163 | MS.gene006487:CDS | 35.0% | |
| TAATGTTTCATCAGAGTGGA+TGG | + | chr4.1:27865681-27865700 | MS.gene006487:CDS | 35.0% | |
| TATAAGGAGGTAATTCACCT+TGG | + | chr4.1:27865338-27865357 | MS.gene006487:intron | 35.0% | |
| TATCAAAGTCCTAAGCAACA+AGG | - | chr4.1:27867841-27867860 | None:intergenic | 35.0% | |
| TATCAGTATCCAAGGATTTG+AGG | - | chr4.1:27868089-27868108 | None:intergenic | 35.0% | |
| TATCATCGAAATGTATAGGG+TGG | - | chr4.1:27868315-27868334 | None:intergenic | 35.0% | |
| TCTTTAGATTATCAGGACTC+AGG | + | chr4.1:27866474-27866493 | MS.gene006487:intron | 35.0% | |
| TGAAATAGCATGTTGAGTGT+TGG | - | chr4.1:27868560-27868579 | None:intergenic | 35.0% | |
| TGGCTGCTTAATATCAATGT+TGG | - | chr4.1:27866578-27866597 | None:intergenic | 35.0% | |
| TGTATAATCCAACCCTAGAT+TGG | + | chr4.1:27868508-27868527 | MS.gene006487:intron | 35.0% | |
| TTCAAAGACCAAACTCACTA+AGG | - | chr4.1:27865849-27865868 | None:intergenic | 35.0% | |
| TTCTTCCATATTGGAAACTC+AGG | + | chr4.1:27866764-27866783 | MS.gene006487:intron | 35.0% | |
| TTGAACTTGACTTACTTACC+AGG | + | chr4.1:27867811-27867830 | MS.gene006487:CDS | 35.0% | |
| TTTCTACTTCATGATTCCTC+AGG | + | chr4.1:27865714-27865733 | MS.gene006487:CDS | 35.0% | |
| TTTCTGTGAAATAGTTGCTC+TGG | - | chr4.1:27867717-27867736 | None:intergenic | 35.0% | |
| ! | AGCAAGTTGAAGCAATTGAT+TGG | + | chr4.1:27865163-27865182 | MS.gene006487:CDS | 35.0% |
| ! | AGCAATCTTTTTGCAGTGAA+TGG | - | chr4.1:27869833-27869852 | None:intergenic | 35.0% |
| ! | CAATCATTTTAGACCTTCCT+AGG | + | chr4.1:27868608-27868627 | MS.gene006487:intron | 35.0% |
| ! | CACCCTTATCTTTTTATGTC+GGG | + | chr4.1:27867080-27867099 | MS.gene006487:intron | 35.0% |
| ! | TCAAAACGATTGTAGGTTGA+AGG | + | chr4.1:27866954-27866973 | MS.gene006487:intron | 35.0% |
| !! | TTTTGGAGACGAACAAGAAT+TGG | + | chr4.1:27869488-27869507 | MS.gene006487:intron | 35.0% |
| !!! | AGAGGCACAAGTTTTAATTG+CGG | + | chr4.1:27868933-27868952 | MS.gene006487:CDS | 35.0% |
| !!! | CAAGTTTTAATTGCGGAAAC+AGG | + | chr4.1:27868940-27868959 | MS.gene006487:CDS | 35.0% |
| !!! | CAATCTACTTTTTGTCTCAG+AGG | - | chr4.1:27870069-27870088 | None:intergenic | 35.0% |
| !!! | TTTTTGGTTATACAGTCCGA+AGG | + | chr4.1:27867922-27867941 | MS.gene006487:intron | 35.0% |
| AAAACTTGTGCCTCTTCTGT+TGG | - | chr4.1:27868928-27868947 | None:intergenic | 40.0% | |
| AATAGTAGCTGTGGCATAGA+AGG | - | chr4.1:27865562-27865581 | None:intergenic | 40.0% | |
| ACTGTGTTTCCGATAAATGC+CGG | - | chr4.1:27867020-27867039 | None:intergenic | 40.0% | |
| ACTGTTTGGGAGAGCTTAAT+TGG | + | chr4.1:27866270-27866289 | MS.gene006487:intron | 40.0% | |
| AGCATGAGATGTAGTTACCT+TGG | - | chr4.1:27866681-27866700 | None:intergenic | 40.0% | |
| AGTATGCCATGTATGTGACT+AGG | + | chr4.1:27867041-27867060 | MS.gene006487:intron | 40.0% | |
| ATAGGCATGCAATAGATGGA+AGG | + | chr4.1:27868111-27868130 | MS.gene006487:intron | 40.0% | |
| ATAGGTTAGAACAACAACCC+TGG | - | chr4.1:27867335-27867354 | None:intergenic | 40.0% | |
| ATATGCTGGAACTGGAATAG+TGG | + | chr4.1:27869713-27869732 | MS.gene006487:CDS | 40.0% | |
| ATCATCCTGTTAACCTAGGA+AGG | - | chr4.1:27868624-27868643 | None:intergenic | 40.0% | |
| ATGCCAGATGAGGTACAAAA+TGG | - | chr4.1:27865117-27865136 | None:intergenic | 40.0% | |
| CAATGCTAACCAAGTTTCCA+GGG | - | chr4.1:27865254-27865273 | None:intergenic | 40.0% | |
| CCAAAGCTTCACTAGTGATA+TGG | - | chr4.1:27867746-27867765 | None:intergenic | 40.0% | |
| CCATATCACTAGTGAAGCTT+TGG | + | chr4.1:27867743-27867762 | MS.gene006487:CDS | 40.0% | |
| CCGATAGTGTTGTCAAATAG+CGG | + | chr4.1:27869984-27870003 | MS.gene006487:intron | 40.0% | |
| CCGCTATTTGACAACACTAT+CGG | - | chr4.1:27869987-27870006 | None:intergenic | 40.0% | |
| CTAGCCGAGAAAAAATTGAC+AGG | + | chr4.1:27866066-27866085 | MS.gene006487:intron | 40.0% | |
| CTAGGTGCTTTGATATATGC+TGG | + | chr4.1:27869699-27869718 | MS.gene006487:CDS | 40.0% | |
| GAAAACAAGCGCGTAGTTAA+AGG | - | chr4.1:27868651-27868670 | None:intergenic | 40.0% | |
| GACACTACCTCACACATTTA+GGG | + | chr4.1:27865996-27866015 | MS.gene006487:intron | 40.0% | |
| GACTTCCAAAGTTCCAATCT+AGG | - | chr4.1:27868524-27868543 | None:intergenic | 40.0% | |
| GAGTTTAATGAGCTTGAAGG+AGG | + | chr4.1:27866091-27866110 | MS.gene006487:CDS | 40.0% | |
| GCTAGAACTCAAAACATCTC+AGG | + | chr4.1:27869767-27869786 | MS.gene006487:CDS | 40.0% | |
| GCTTACCACTACTATTGCTT+GGG | + | chr4.1:27866120-27866139 | MS.gene006487:CDS | 40.0% | |
| GCTTTGATATATGCTGGAAC+TGG | + | chr4.1:27869705-27869724 | MS.gene006487:CDS | 40.0% | |
| GGCTATGTACAGTCTCAAAA+TGG | + | chr4.1:27865065-27865084 | MS.gene006487:CDS | 40.0% | |
| GGGATTGGATATCTATAAGG+AGG | + | chr4.1:27865325-27865344 | MS.gene006487:CDS | 40.0% | |
| GTAAACTCAATGTCGTCCTT+CGG | - | chr4.1:27867941-27867960 | None:intergenic | 40.0% | |
| GTATTATGTAACCCTAGGCT+TGG | + | chr4.1:27867192-27867211 | MS.gene006487:intron | 40.0% | |
| GTTAAGAAACGAAGAGGATG+AGG | + | chr4.1:27868764-27868783 | MS.gene006487:CDS | 40.0% | |
| TAGGTGGCTGAAGGAAAAAT+TGG | - | chr4.1:27866992-27867011 | None:intergenic | 40.0% | |
| TCTAGGCAGATTCTCACTTA+GGG | + | chr4.1:27868383-27868402 | MS.gene006487:intron | 40.0% | |
| TGACACTACCTCACACATTT+AGG | + | chr4.1:27865995-27866014 | MS.gene006487:intron | 40.0% | |
| TGATAAGTGGGTATGGTTCA+GGG | + | chr4.1:27867128-27867147 | MS.gene006487:intron | 40.0% | |
| TGCTTACCACTACTATTGCT+TGG | + | chr4.1:27866119-27866138 | MS.gene006487:CDS | 40.0% | |
| TGGAAGGTTAAGAAACGAAG+AGG | + | chr4.1:27868758-27868777 | MS.gene006487:CDS | 40.0% | |
| TGTAGTTACCTTGGTAAGTG+AGG | - | chr4.1:27866672-27866691 | None:intergenic | 40.0% | |
| TTAGACCTTCCTAGGTTAAC+AGG | + | chr4.1:27868616-27868635 | MS.gene006487:intron | 40.0% | |
| TTAGATTATCAGGACTCAGG+AGG | + | chr4.1:27866477-27866496 | MS.gene006487:intron | 40.0% | |
| ! | AAACGATTGTAGGTTGAAGG+TGG | + | chr4.1:27866957-27866976 | MS.gene006487:intron | 40.0% |
| ! | CTTATTTCCACAAGCTCTGA+AGG | + | chr4.1:27866327-27866346 | MS.gene006487:intron | 40.0% |
| ! | GTTTTCACTTCAACTCGCTT+TGG | + | chr4.1:27869155-27869174 | MS.gene006487:intron | 40.0% |
| ! | TCTCCATTTTGTACCTCATC+TGG | + | chr4.1:27865111-27865130 | MS.gene006487:CDS | 40.0% |
| !! | AACGTGGTTAGCTTGTCTAA+AGG | + | chr4.1:27866839-27866858 | MS.gene006487:CDS | 40.0% |
| !! | AGCCATTTTCCTATTGGGAT+TGG | + | chr4.1:27865310-27865329 | MS.gene006487:CDS | 40.0% |
| !! | AGTCACAGCCATTTTCCTAT+TGG | + | chr4.1:27865304-27865323 | MS.gene006487:CDS | 40.0% |
| !! | GTCACAGCCATTTTCCTATT+GGG | + | chr4.1:27865305-27865324 | MS.gene006487:CDS | 40.0% |
| !! | GTTAGCTTGTCTAAAGGTAC+TGG | + | chr4.1:27866845-27866864 | MS.gene006487:intron | 40.0% |
| !! | GTTCAGAAGTGTTTGATCGA+GGG | + | chr4.1:27869205-27869224 | MS.gene006487:intron | 40.0% |
| !! | TGTTCAGAAGTGTTTGATCG+AGG | + | chr4.1:27869204-27869223 | MS.gene006487:intron | 40.0% |
| AAATGGCTGTGACTGCGAAA+AGG | - | chr4.1:27865298-27865317 | None:intergenic | 45.0% | |
| AACTCTCACTATGCCAGATG+AGG | - | chr4.1:27865127-27865146 | None:intergenic | 45.0% | |
| AAGCAACCCATACTTGGAGT+GGG | + | chr4.1:27869740-27869759 | MS.gene006487:CDS | 45.0% | |
| AAGCTATCCTTCAGAGCTTG+TGG | - | chr4.1:27866337-27866356 | None:intergenic | 45.0% | |
| AAGGAACAGAAATCTTGCCC+TGG | + | chr4.1:27865234-27865253 | MS.gene006487:CDS | 45.0% | |
| AGACAAGCTAACCACGTTAG+AGG | - | chr4.1:27866837-27866856 | None:intergenic | 45.0% | |
| AGTAAGTGTTAGGGCCTGTT+TGG | + | chr4.1:27866204-27866223 | MS.gene006487:intron | 45.0% | |
| AGTAGCATCTAGGAAGCAGA+AGG | - | chr4.1:27865206-27865225 | None:intergenic | 45.0% | |
| ATAAATGCCGGTGCATTAGG+TGG | - | chr4.1:27867008-27867027 | None:intergenic | 45.0% | |
| ATAAGTGGGTATGGTTCAGG+GGG | + | chr4.1:27867130-27867149 | MS.gene006487:intron | 45.0% | |
| ATCTGGCATAGTGAGAGTTG+AGG | + | chr4.1:27865128-27865147 | MS.gene006487:CDS | 45.0% | |
| CCAACCCTAGATTGGAACTT+TGG | + | chr4.1:27868516-27868535 | MS.gene006487:intron | 45.0% | |
| CCTAAGCAACAAGGTAAACC+TGG | - | chr4.1:27867832-27867851 | None:intergenic | 45.0% | |
| CTAGGCAGATTCTCACTTAG+GGG | + | chr4.1:27868384-27868403 | MS.gene006487:intron | 45.0% | |
| CTCCATATGCGCGAATCAAA+GGG | - | chr4.1:27865639-27865658 | None:intergenic | 45.0% | |
| CTGATAAGTGGGTATGGTTC+AGG | + | chr4.1:27867127-27867146 | MS.gene006487:intron | 45.0% | |
| GAAATCTTGCCCTGGAAACT+TGG | + | chr4.1:27865242-27865261 | MS.gene006487:CDS | 45.0% | |
| GAGAGTTGAGGTTCCTATTG+AGG | + | chr4.1:27865140-27865159 | MS.gene006487:CDS | 45.0% | |
| GATAAGTGGGTATGGTTCAG+GGG | + | chr4.1:27867129-27867148 | MS.gene006487:intron | 45.0% | |
| GCAATGCTAACCAAGTTTCC+AGG | - | chr4.1:27865255-27865274 | None:intergenic | 45.0% | |
| GGAAACTTGGTTAGCATTGC+TGG | + | chr4.1:27865255-27865274 | MS.gene006487:CDS | 45.0% | |
| GTCTAGGCAGATTCTCACTT+AGG | + | chr4.1:27868382-27868401 | MS.gene006487:intron | 45.0% | |
| GTTTGGTCCCTAAATGTGTG+AGG | - | chr4.1:27866006-27866025 | None:intergenic | 45.0% | |
| TACTGCAACCATTCTGCAGT+TGG | + | chr4.1:27867227-27867246 | MS.gene006487:intron | 45.0% | |
| TCGATGATGTGACACTGTCT+AGG | + | chr4.1:27868366-27868385 | MS.gene006487:intron | 45.0% | |
| TCTTTGTTGGTCGTGGGAAA+AGG | + | chr4.1:27866150-27866169 | MS.gene006487:CDS | 45.0% | |
| TTGCCAGAGAAGTAGCATCT+AGG | - | chr4.1:27865216-27865235 | None:intergenic | 45.0% | |
| TTGGTTAGCATTGCTGGTGT+TGG | + | chr4.1:27865261-27865280 | MS.gene006487:CDS | 45.0% | |
| TTGTGGCTTTCCAACAGAAG+AGG | + | chr4.1:27868915-27868934 | MS.gene006487:CDS | 45.0% | |
| TTTGATCGAGGGATGTATGC+TGG | + | chr4.1:27869216-27869235 | MS.gene006487:CDS | 45.0% | |
| ! | AAACTCAGGTTGTTCTAGCG+CGG | + | chr4.1:27866778-27866797 | MS.gene006487:intron | 45.0% |
| ! | AATGTTGGAGGAGCTTGCTT+AGG | - | chr4.1:27866563-27866582 | None:intergenic | 45.0% |
| ! | ATCACTAGTGAAGCTTTGGC+CGG | + | chr4.1:27867747-27867766 | MS.gene006487:CDS | 45.0% |
| ! | CCAAAGTTCCAATCTAGGGT+TGG | - | chr4.1:27868519-27868538 | None:intergenic | 45.0% |
| ! | CCAGGTTTACCTTGTTGCTT+AGG | + | chr4.1:27867829-27867848 | MS.gene006487:intron | 45.0% |
| ! | CCTAATGCACCGGCATTTAT+CGG | + | chr4.1:27867008-27867027 | MS.gene006487:CDS | 45.0% |
| ! | CTTCCTAGATGCTACTTCTC+TGG | + | chr4.1:27865210-27865229 | MS.gene006487:CDS | 45.0% |
| ! | GCTTCAACTTGCTCCTCAAT+AGG | - | chr4.1:27865156-27865175 | None:intergenic | 45.0% |
| ! | TAGATGCTACTTCTCTGGCA+AGG | + | chr4.1:27865215-27865234 | MS.gene006487:CDS | 45.0% |
| ! | TCATCAGAGTGGATGGCTTT+TGG | + | chr4.1:27865688-27865707 | MS.gene006487:CDS | 45.0% |
| ! | TGTGTGAGGTAGTGTCACTA+TGG | - | chr4.1:27865992-27866011 | None:intergenic | 45.0% |
| AAGCCACAAACTGCAGGACT+TGG | - | chr4.1:27868904-27868923 | None:intergenic | 50.0% | |
| ACCAGTAGCATCAGCTGCAA+TGG | + | chr4.1:27865044-27865063 | MS.gene006487:CDS | 50.0% | |
| AGCATCTAGGAAGCAGAAGG+TGG | - | chr4.1:27865203-27865222 | None:intergenic | 50.0% | |
| AGCCACAAACTGCAGGACTT+GGG | - | chr4.1:27868903-27868922 | None:intergenic | 50.0% | |
| AGCTCATCCCACTCCAAGTA+TGG | - | chr4.1:27869750-27869769 | None:intergenic | 50.0% | |
| ATTGCAGCTGATGCTACTGG+TGG | - | chr4.1:27865045-27865064 | None:intergenic | 50.0% | |
| CAATGCTGACCTGATGCCAA+CGG | - | chr4.1:27869280-27869299 | None:intergenic | 50.0% | |
| CCGATAAATGCCGGTGCATT+AGG | - | chr4.1:27867011-27867030 | None:intergenic | 50.0% | |
| CCTCCATATGCGCGAATCAA+AGG | - | chr4.1:27865640-27865659 | None:intergenic | 50.0% | |
| CGCGTTTCTATCGTCCTAAC+TGG | - | chr4.1:27865015-27865034 | None:intergenic | 50.0% | |
| CTAGTGATGGTCCTCTAGCA+CGG | - | chr4.1:27867776-27867795 | None:intergenic | 50.0% | |
| GAAGCAACCCATACTTGGAG+TGG | + | chr4.1:27869739-27869758 | MS.gene006487:CDS | 50.0% | |
| GCTCATCCCACTCCAAGTAT+GGG | - | chr4.1:27869749-27869768 | None:intergenic | 50.0% | |
| GGAAGGAAGCAACCCATACT+TGG | + | chr4.1:27869734-27869753 | MS.gene006487:CDS | 50.0% | |
| GTTGGAAAGCCACAAACTGC+AGG | - | chr4.1:27868910-27868929 | None:intergenic | 50.0% | |
| TAGCTGTGGCATAGAAGGCA+GGG | - | chr4.1:27865557-27865576 | None:intergenic | 50.0% | |
| TAGTGATGGTCCTCTAGCAC+GGG | - | chr4.1:27867775-27867794 | None:intergenic | 50.0% | |
| TGACGGTCTAGTGCTAGTGA+TGG | - | chr4.1:27867789-27867808 | None:intergenic | 50.0% | |
| TGTATGCTGGACCTGTTGGT+TGG | + | chr4.1:27869229-27869248 | MS.gene006487:CDS | 50.0% | |
| TTATGTCGGGTATGGGCGTA+TGG | + | chr4.1:27867093-27867112 | MS.gene006487:intron | 50.0% | |
| ! | CCTTTGATTCGCGCATATGG+AGG | + | chr4.1:27865637-27865656 | MS.gene006487:CDS | 50.0% |
| ! | GCTGGAACTGGAATAGTGGA+AGG | + | chr4.1:27869717-27869736 | MS.gene006487:CDS | 50.0% |
| ! | TGCCCTTTGATTCGCGCATA+TGG | + | chr4.1:27865634-27865653 | MS.gene006487:CDS | 50.0% |
| !! | AACTACGCGCTTGTTTTCGC+AGG | + | chr4.1:27868653-27868672 | MS.gene006487:intron | 50.0% |
| !! | TGTTTCTTGAAGTGCCGCGA+TGG | - | chr4.1:27866176-27866195 | None:intergenic | 50.0% |
| CACCCAAGTCCTGCAGTTTG+TGG | + | chr4.1:27868898-27868917 | MS.gene006487:CDS | 55.0% | |
| CCTCCTCCAAACCAACCAAC+AGG | - | chr4.1:27869243-27869262 | None:intergenic | 55.0% | |
| CCTTCAGCCACCTAATGCAC+CGG | + | chr4.1:27866998-27867017 | MS.gene006487:CDS | 55.0% | |
| CGTTGGCATCAGGTCAGCAT+TGG | + | chr4.1:27869278-27869297 | MS.gene006487:CDS | 55.0% | |
| GAACACAGGGTATGCACCTG+AGG | - | chr4.1:27865733-27865752 | None:intergenic | 55.0% | |
| GCCATTGCAGCTGATGCTAC+TGG | - | chr4.1:27865048-27865067 | None:intergenic | 55.0% | |
| GGGATGTATGCTGGACCTGT+TGG | + | chr4.1:27869225-27869244 | MS.gene006487:CDS | 55.0% | |
| GTAGCTGTGGCATAGAAGGC+AGG | - | chr4.1:27865558-27865577 | None:intergenic | 55.0% | |
| GTGAGTTTGCCGTTGGCATC+AGG | + | chr4.1:27869268-27869287 | MS.gene006487:CDS | 55.0% | |
| TAGAAGGCAGGGTGCAGAAG+AGG | - | chr4.1:27865546-27865565 | None:intergenic | 55.0% | |
| TTCGCAGGCAGTCTGCGAAA+AGG | + | chr4.1:27868668-27868687 | MS.gene006487:intron | 55.0% | |
| ! | GCTGGACCTGTTGGTTGGTT+TGG | + | chr4.1:27869234-27869253 | MS.gene006487:CDS | 55.0% |
| ! | TGGCATCAGGTCAGCATTGG+TGG | + | chr4.1:27869281-27869300 | MS.gene006487:CDS | 55.0% |
| !! | CAGGTCAGCATTGGTGGAAC+AGG | + | chr4.1:27869287-27869306 | MS.gene006487:CDS | 55.0% |
| !! | CCTGTTGGTTGGTTTGGAGG+AGG | + | chr4.1:27869240-27869259 | MS.gene006487:CDS | 55.0% |
| !! | GGACCTGTTGGTTGGTTTGG+AGG | + | chr4.1:27869237-27869256 | MS.gene006487:CDS | 55.0% |
| CCGGTGCATTAGGTGGCTGA+AGG | - | chr4.1:27867001-27867020 | None:intergenic | 60.0% | |
| GTCGTGGGAAAAGGCCATCG+CGG | + | chr4.1:27866159-27866178 | MS.gene006487:CDS | 60.0% | |
| TGGTCCTCTAGCACGGGTTC+CGG | - | chr4.1:27867769-27867788 | None:intergenic | 60.0% | |
| TTGGCCGGAACCCGTGCTAG+AGG | + | chr4.1:27867762-27867781 | MS.gene006487:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 27864967 | 27870095 | 27864967 | ID=MS.gene006487 |
| chr4.1 | mRNA | 27864967 | 27870095 | 27864967 | ID=MS.gene006487.t1;Parent=MS.gene006487 |
| chr4.1 | exon | 27864967 | 27865346 | 27864967 | ID=MS.gene006487.t1.exon1;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27864967 | 27865346 | 27864967 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27865618 | 27865735 | 27865618 | ID=MS.gene006487.t1.exon2;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27865618 | 27865735 | 27865618 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27866088 | 27866204 | 27866088 | ID=MS.gene006487.t1.exon3;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27866088 | 27866204 | 27866088 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27866536 | 27866682 | 27866536 | ID=MS.gene006487.t1.exon4;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27866536 | 27866682 | 27866536 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27866786 | 27866860 | 27866786 | ID=MS.gene006487.t1.exon5;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27866786 | 27866860 | 27866786 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27866969 | 27867037 | 27866969 | ID=MS.gene006487.t1.exon6;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27866969 | 27867037 | 27866969 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27867714 | 27867832 | 27867714 | ID=MS.gene006487.t1.exon7;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27867714 | 27867832 | 27867714 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27867937 | 27867994 | 27867937 | ID=MS.gene006487.t1.exon8;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27867937 | 27867994 | 27867937 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27868675 | 27868785 | 27868675 | ID=MS.gene006487.t1.exon9;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27868675 | 27868785 | 27868675 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27868877 | 27868961 | 27868877 | ID=MS.gene006487.t1.exon10;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27868877 | 27868961 | 27868877 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27869211 | 27869308 | 27869211 | ID=MS.gene006487.t1.exon11;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27869211 | 27869308 | 27869211 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27869696 | 27869788 | 27869696 | ID=MS.gene006487.t1.exon12;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27869696 | 27869788 | 27869696 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| chr4.1 | exon | 27870039 | 27870095 | 27870039 | ID=MS.gene006487.t1.exon13;Parent=MS.gene006487.t1 |
| chr4.1 | CDS | 27870039 | 27870095 | 27870039 | ID=cds.MS.gene006487.t1;Parent=MS.gene006487.t1 |
| Gene Sequence |
| Protein sequence |
