Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007078.t1 | XP_013450261.1 | 93.8 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 3.00E-248 | 867.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007078.t1 | E9L7A5 | 76.1 | 465 | 103 | 3 | 14 | 474 | 13 | 473 | 3.3e-195 | 682.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007078.t1 | A0A072U3J0 | 93.8 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 2.1e-248 | 867.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031869 | MS.gene007078 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007078.t1 | MTR_7g106830 | 93.750 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 0.0 | 920 |
| MS.gene007078.t1 | MTR_8g091280 | 84.440 | 482 | 66 | 3 | 1 | 480 | 1 | 475 | 0.0 | 821 |
| MS.gene007078.t1 | MTR_1807s0010 | 38.046 | 389 | 237 | 2 | 80 | 467 | 7 | 392 | 2.97e-82 | 260 |
| MS.gene007078.t1 | MTR_3g072670 | 30.513 | 390 | 247 | 10 | 88 | 471 | 72 | 443 | 2.81e-51 | 180 |
| MS.gene007078.t1 | MTR_3g072680 | 30.189 | 371 | 237 | 9 | 107 | 471 | 46 | 400 | 1.47e-49 | 174 |
| MS.gene007078.t1 | MTR_4g011820 | 29.944 | 354 | 219 | 9 | 135 | 480 | 62 | 394 | 1.91e-42 | 155 |
| MS.gene007078.t1 | MTR_1g087760 | 32.376 | 383 | 223 | 11 | 107 | 471 | 30 | 394 | 4.78e-42 | 154 |
| MS.gene007078.t1 | MTR_3g072690 | 29.290 | 338 | 183 | 9 | 107 | 442 | 11 | 294 | 5.95e-36 | 135 |
| MS.gene007078.t1 | MTR_8g061360 | 23.280 | 378 | 263 | 10 | 106 | 468 | 42 | 407 | 4.90e-21 | 95.5 |
| MS.gene007078.t1 | MTR_2g008430 | 24.923 | 325 | 206 | 11 | 106 | 405 | 72 | 383 | 8.58e-17 | 82.8 |
| MS.gene007078.t1 | MTR_8g098930 | 21.763 | 363 | 247 | 14 | 142 | 480 | 95 | 444 | 1.33e-16 | 82.4 |
| MS.gene007078.t1 | MTR_2g090615 | 22.888 | 367 | 258 | 10 | 114 | 468 | 57 | 410 | 2.85e-16 | 81.3 |
| MS.gene007078.t1 | MTR_4g092620 | 24.923 | 325 | 206 | 11 | 106 | 405 | 91 | 402 | 5.08e-14 | 74.3 |
| MS.gene007078.t1 | MTR_8g101820 | 21.392 | 388 | 267 | 15 | 102 | 471 | 46 | 413 | 1.36e-12 | 69.7 |
| MS.gene007078.t1 | MTR_6g463260 | 21.024 | 371 | 263 | 13 | 120 | 471 | 166 | 525 | 7.87e-12 | 67.8 |
| MS.gene007078.t1 | MTR_4g097540 | 18.873 | 355 | 256 | 9 | 146 | 475 | 91 | 438 | 8.78e-12 | 67.4 |
| MS.gene007078.t1 | MTR_7g079080 | 23.005 | 213 | 149 | 5 | 142 | 340 | 94 | 305 | 2.72e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007078.t1 | AT2G22250 | 73.349 | 424 | 110 | 2 | 53 | 474 | 47 | 469 | 0.0 | 641 |
| MS.gene007078.t1 | AT2G22250 | 73.349 | 424 | 110 | 2 | 53 | 474 | 47 | 469 | 0.0 | 641 |
| MS.gene007078.t1 | AT2G22250 | 75.871 | 402 | 97 | 0 | 73 | 474 | 21 | 422 | 0.0 | 640 |
| MS.gene007078.t1 | AT1G77670 | 29.612 | 412 | 263 | 11 | 66 | 471 | 46 | 436 | 3.54e-55 | 191 |
| MS.gene007078.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007078.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007078.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007078.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007078.t1 | AT4G28420 | 23.404 | 376 | 265 | 9 | 105 | 467 | 61 | 426 | 6.53e-24 | 104 |
| MS.gene007078.t1 | AT5G36160 | 21.622 | 407 | 285 | 9 | 84 | 469 | 17 | 410 | 2.72e-21 | 96.3 |
| MS.gene007078.t1 | AT5G53970 | 21.636 | 379 | 278 | 6 | 101 | 468 | 30 | 400 | 1.00e-19 | 91.7 |
| MS.gene007078.t1 | AT2G20610 | 22.802 | 364 | 262 | 8 | 114 | 468 | 80 | 433 | 4.29e-19 | 90.1 |
| MS.gene007078.t1 | AT2G24850 | 23.055 | 347 | 236 | 11 | 137 | 468 | 87 | 417 | 6.39e-19 | 89.4 |
| MS.gene007078.t1 | AT4G28420 | 22.756 | 312 | 224 | 8 | 105 | 403 | 61 | 368 | 1.08e-18 | 88.2 |
| MS.gene007078.t1 | AT4G28410 | 22.164 | 379 | 246 | 12 | 114 | 468 | 82 | 435 | 1.55e-16 | 82.0 |
| MS.gene007078.t1 | AT1G01480 | 27.650 | 217 | 136 | 6 | 142 | 340 | 95 | 308 | 1.91e-16 | 82.0 |
| MS.gene007078.t1 | AT4G23600 | 21.270 | 315 | 210 | 10 | 172 | 468 | 4 | 298 | 3.68e-15 | 76.6 |
| MS.gene007078.t1 | AT2G13810 | 23.155 | 393 | 250 | 12 | 104 | 469 | 70 | 437 | 8.01e-15 | 77.0 |
| MS.gene007078.t1 | AT2G20610 | 22.647 | 340 | 238 | 9 | 114 | 441 | 80 | 406 | 1.34e-14 | 76.3 |
| MS.gene007078.t1 | AT5G51690 | 22.884 | 319 | 225 | 10 | 137 | 442 | 25 | 335 | 1.50e-14 | 75.5 |
| MS.gene007078.t1 | AT5G51690 | 22.884 | 319 | 225 | 10 | 137 | 442 | 148 | 458 | 2.66e-14 | 75.5 |
| MS.gene007078.t1 | AT4G28410 | 21.849 | 357 | 230 | 10 | 114 | 457 | 82 | 402 | 2.92e-14 | 75.1 |
| MS.gene007078.t1 | AT1G01480 | 26.904 | 197 | 125 | 5 | 160 | 340 | 9 | 202 | 4.59e-14 | 74.3 |
| MS.gene007078.t1 | AT4G23590 | 19.469 | 339 | 237 | 10 | 147 | 468 | 83 | 402 | 4.74e-14 | 74.3 |
| MS.gene007078.t1 | AT4G33680 | 24.308 | 325 | 208 | 11 | 106 | 405 | 93 | 404 | 5.60e-14 | 74.3 |
| MS.gene007078.t1 | AT1G62960 | 24.096 | 332 | 215 | 13 | 133 | 442 | 202 | 518 | 3.05e-13 | 72.4 |
| MS.gene007078.t1 | AT4G08040 | 21.212 | 330 | 231 | 11 | 157 | 468 | 102 | 420 | 5.07e-13 | 71.2 |
| MS.gene007078.t1 | AT4G26200 | 21.490 | 349 | 246 | 11 | 142 | 471 | 102 | 441 | 4.26e-12 | 68.6 |
Find 122 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCCATCCTTGCCATTTC+TGG | 0.086449 | 7.3:-6995274 | None:intergenic |
| TCTTGACCTTTCACTTATTA+TGG | 0.141566 | 7.3:-6995365 | None:intergenic |
| GCAATTTGTCATAAACTAAA+AGG | 0.247543 | 7.3:+6994935 | MS.gene007078:CDS |
| TATTATGGATTCAAGAAGTT+TGG | 0.255108 | 7.3:-6995350 | None:intergenic |
| ATTGATTTCAGCTCCTATTA+TGG | 0.261186 | 7.3:+6996431 | MS.gene007078:CDS |
| TTGGGTGCTTTGCTACAATA+TGG | 0.279374 | 7.3:-6995459 | None:intergenic |
| TTCAGCTTCTCTTCCATAAT+AGG | 0.283252 | 7.3:-6996444 | None:intergenic |
| CAAGAAGTTTGGGATCTAAA+AGG | 0.290370 | 7.3:-6995339 | None:intergenic |
| TATTGAATTTAGTTTACTTC+GGG | 0.293177 | 7.3:+6996139 | MS.gene007078:intron |
| GGAAGAGAAGCTGAAGGTTT+TGG | 0.300530 | 7.3:+6996452 | MS.gene007078:CDS |
| TGGCGGCTTGGTTATATTGC+AGG | 0.312104 | 7.3:+6995869 | MS.gene007078:CDS |
| ATCTCTTCAAGTAATTTCTT+AGG | 0.314071 | 7.3:-6995433 | None:intergenic |
| ATGCTTGCAGTTTGCTCTCC+AGG | 0.323730 | 7.3:+6995120 | MS.gene007078:CDS |
| ATTCTAAAGTTCCCGCATTA+CGG | 0.328676 | 7.3:-6994904 | None:intergenic |
| AGCAAAGCACCCAAGGCTTT+TGG | 0.340366 | 7.3:+6995468 | MS.gene007078:CDS |
| ATGCTGAAATAAAATGTTTC+GGG | 0.353525 | 7.3:-6995892 | None:intergenic |
| CTTGTGCCAGGGAGTGCATC+TGG | 0.364335 | 7.3:+6996642 | MS.gene007078:CDS |
| ATTATGGATTCAAGAAGTTT+GGG | 0.364458 | 7.3:-6995349 | None:intergenic |
| TGTCAATATCTGTTGCATAA+AGG | 0.366152 | 7.3:+6996500 | MS.gene007078:CDS |
| GCCTCTCTCCACGTCTCTTT+CGG | 0.381502 | 7.3:+6993631 | MS.gene007078:CDS |
| CATGCTGAAATAAAATGTTT+CGG | 0.387560 | 7.3:-6995893 | None:intergenic |
| TAGCCATCCTTGCCATTTCT+GGG | 0.389312 | 7.3:-6995273 | None:intergenic |
| TTCTAAAGTTCCCGCATTAC+GGG | 0.394245 | 7.3:-6994903 | None:intergenic |
| CAGACTTTGCGGGGAGAGAT+TGG | 0.395759 | 7.3:-6993609 | None:intergenic |
| CCAGCCGCCAAGAGAATAAC+AGG | 0.395883 | 7.3:-6993868 | None:intergenic |
| AGGCGTTCCTGTTATTCTCT+TGG | 0.401942 | 7.3:+6993861 | MS.gene007078:CDS |
| CTACAGGTCGCACTTGTGCC+AGG | 0.411505 | 7.3:+6996630 | MS.gene007078:intron |
| ACAAGTGCAGCTGAGGTAAG+AGG | 0.413408 | 7.3:-6996750 | None:intergenic |
| TGGAGAGAGGCAGACTTTGC+GGG | 0.421746 | 7.3:-6993619 | None:intergenic |
| CTGCAGCCCTTTGCAATGAC+TGG | 0.426334 | 7.3:+6995845 | MS.gene007078:intron |
| CTATGTTAGTTACCCAGAAA+TGG | 0.430251 | 7.3:+6995261 | MS.gene007078:CDS |
| AAAGCTGCAGTTGCTGCATC+AGG | 0.433618 | 7.3:+6996181 | MS.gene007078:CDS |
| TATAACTTTACCAAAAGCCT+TGG | 0.435701 | 7.3:-6995478 | None:intergenic |
| GCAATGACTGGTTGGCGGCT+TGG | 0.436164 | 7.3:+6995857 | MS.gene007078:CDS |
| CCTGTTATTCTCTTGGCGGC+TGG | 0.440530 | 7.3:+6993868 | MS.gene007078:CDS |
| TGCTTGCAGTTTGCTCTCCA+GGG | 0.440573 | 7.3:+6995121 | MS.gene007078:CDS |
| GCAAAGCTAGTGTGTGTTGC+TGG | 0.444438 | 7.3:-6995624 | None:intergenic |
| TCAATGCTGTGAAACCTTCA+AGG | 0.445837 | 7.3:+6993797 | MS.gene007078:CDS |
| TTATTGAATTTAGTTTACTT+CGG | 0.446135 | 7.3:+6996138 | MS.gene007078:intron |
| ATGTGGAAAGATTCAAAGTC+AGG | 0.449025 | 7.3:+6995913 | MS.gene007078:CDS |
| GTGGAGAGAGGCAGACTTTG+CGG | 0.454753 | 7.3:-6993620 | None:intergenic |
| TAAATCATCATTATCAGAAA+CGG | 0.458616 | 7.3:-6993746 | None:intergenic |
| TTAGTTTATGACAAATTGCT+TGG | 0.459042 | 7.3:-6994931 | None:intergenic |
| AACCTTAGAAAATCCATTCA+CGG | 0.462409 | 7.3:-6995679 | None:intergenic |
| GTTATAGACACAGTCCTTGA+AGG | 0.462583 | 7.3:-6993811 | None:intergenic |
| ACAGCAGGTGTATCAAAATC+AGG | 0.465547 | 7.3:-6993895 | None:intergenic |
| GCAGTTGCTGCATCAGGACT+AGG | 0.466446 | 7.3:+6996187 | MS.gene007078:CDS |
| TGCCTGAGCAATACTCTGCT+TGG | 0.472297 | 7.3:-6995097 | None:intergenic |
| GATCAGATTATTGTTAGTAA+TGG | 0.476011 | 7.3:+6995072 | MS.gene007078:CDS |
| ACAGATCCTGTCGGGTTAGA+CGG | 0.476864 | 7.3:-6995406 | None:intergenic |
| TCTCTCTACAGCTGCCTGTA+GGG | 0.480917 | 7.3:-6996709 | None:intergenic |
| GATAAAACGCTAACCGTGAA+TGG | 0.483375 | 7.3:+6995666 | MS.gene007078:CDS |
| AGTTTGCTCTCCAGGGGATG+AGG | 0.487625 | 7.3:+6995128 | MS.gene007078:CDS |
| TGGGTGCTTTGCTACAATAT+GGG | 0.487759 | 7.3:-6995458 | None:intergenic |
| GCATCAGGACTAGGCTATGC+TGG | 0.488598 | 7.3:+6996196 | MS.gene007078:CDS |
| AAGGATTCACACCTGTGGTT+CGG | 0.490759 | 7.3:-6996311 | None:intergenic |
| TCTGGGTAACTAACATAGAA+TGG | 0.491015 | 7.3:-6995256 | None:intergenic |
| ATTGACGTTGGAAGGATAAC+GGG | 0.491897 | 7.3:-6995304 | None:intergenic |
| CGTTCCTGTTATTCTCTTGG+CGG | 0.495894 | 7.3:+6993864 | MS.gene007078:CDS |
| TAGAGAACGAAGGAATTACT+TGG | 0.497722 | 7.3:+6996252 | MS.gene007078:CDS |
| CGCCAACCAGTCATTGCAAA+GGG | 0.498469 | 7.3:-6995851 | None:intergenic |
| CCTTTGCAATGACTGGTTGG+CGG | 0.506213 | 7.3:+6995852 | MS.gene007078:CDS |
| TCGTCTCCAGATGCACTCCC+TGG | 0.507721 | 7.3:-6996648 | None:intergenic |
| TAACTAACATAGAATGGAGC+TGG | 0.508014 | 7.3:-6995250 | None:intergenic |
| TATCAGATATTGACGTTGGA+AGG | 0.508504 | 7.3:-6995312 | None:intergenic |
| TAGGATAGACAGATCCTGTC+GGG | 0.509644 | 7.3:-6995414 | None:intergenic |
| ACTAGCTTTGCATCTTTACC+TGG | 0.509818 | 7.3:+6995636 | MS.gene007078:CDS |
| ATAACTTTACCAAAAGCCTT+GGG | 0.511183 | 7.3:-6995477 | None:intergenic |
| AGTACTGTAAAATATGTTGT+TGG | 0.516836 | 7.3:+6993679 | MS.gene007078:CDS |
| CCTTTACTCACCTCATCCCC+TGG | 0.518226 | 7.3:-6995138 | None:intergenic |
| TATTGACGTTGGAAGGATAA+CGG | 0.518343 | 7.3:-6995305 | None:intergenic |
| TGCATCTTTACCTGGAATGT+GGG | 0.520471 | 7.3:+6995644 | MS.gene007078:CDS |
| TTGCATCTTTACCTGGAATG+TGG | 0.521651 | 7.3:+6995643 | MS.gene007078:CDS |
| AGCATCTCTTCCTACCCTAC+AGG | 0.523160 | 7.3:+6996695 | MS.gene007078:CDS |
| GCCACCGCTCTTGTTCAAGC+AGG | 0.531444 | 7.3:+6993841 | MS.gene007078:CDS |
| AGCCCTTTGCAATGACTGGT+TGG | 0.531466 | 7.3:+6995849 | MS.gene007078:intron |
| ACAAGGTACACCCGTAATGC+GGG | 0.533223 | 7.3:+6994893 | MS.gene007078:CDS |
| TACACCTGCTGTCATAGCTC+AGG | 0.536347 | 7.3:+6993906 | MS.gene007078:CDS |
| AGCCAAGCAGAGTATTGCTC+AGG | 0.549115 | 7.3:+6995095 | MS.gene007078:CDS |
| TGTTCGCCGTCTAACCCGAC+AGG | 0.550345 | 7.3:+6995400 | MS.gene007078:CDS |
| CAAGTGCAGCTGAGGTAAGA+GGG | 0.556805 | 7.3:-6996749 | None:intergenic |
| AAATTATCAGATATTGACGT+TGG | 0.562680 | 7.3:-6995316 | None:intergenic |
| ATATCTGTTGCATAAAGGCC+AGG | 0.563043 | 7.3:+6996505 | MS.gene007078:CDS |
| TACAGGTCGCACTTGTGCCA+GGG | 0.565282 | 7.3:+6996631 | MS.gene007078:intron |
| TTCTCTCTACAGCTGCCTGT+AGG | 0.565977 | 7.3:-6996710 | None:intergenic |
| GCTTGCAGTTTGCTCTCCAG+GGG | 0.566776 | 7.3:+6995122 | MS.gene007078:CDS |
| TTATATAACAACACCACATG+TGG | 0.567338 | 7.3:+6993571 | MS.gene007078:CDS |
| TTACCCAGAAATGGCAAGGA+TGG | 0.570545 | 7.3:+6995270 | MS.gene007078:CDS |
| TCTACAGCTGCCTGTAGGGT+AGG | 0.574697 | 7.3:-6996705 | None:intergenic |
| AGCTTTCTGAGATATACTAC+TGG | 0.576070 | 7.3:-6996164 | None:intergenic |
| ATTGAATTTAGTTTACTTCG+GGG | 0.577826 | 7.3:+6996140 | MS.gene007078:intron |
| GGTGTTGTTATATAACATGT+TGG | 0.577834 | 7.3:-6993563 | None:intergenic |
| TTGAATCCATAATAAGTGAA+AGG | 0.578044 | 7.3:+6995359 | MS.gene007078:CDS |
| GGGATTAATGCAATTCATGA+AGG | 0.585738 | 7.3:+6994866 | MS.gene007078:CDS |
| GGTTTCACAGCATTGACTCG+TGG | 0.588407 | 7.3:-6993790 | None:intergenic |
| CACAAGGTACACCCGTAATG+CGG | 0.593712 | 7.3:+6994892 | MS.gene007078:CDS |
| GGAGAGAGGCAGACTTTGCG+GGG | 0.594917 | 7.3:-6993618 | None:intergenic |
| GGAGTGGAGCAGAACAGAAG+AGG | 0.596530 | 7.3:+6993700 | MS.gene007078:CDS |
| CCGCCAACCAGTCATTGCAA+AGG | 0.598202 | 7.3:-6995852 | None:intergenic |
| TGTTGAAATATCCGAACCAC+AGG | 0.604423 | 7.3:+6996300 | MS.gene007078:CDS |
| CAGACCTGAGCTATGACAGC+AGG | 0.609037 | 7.3:-6993910 | None:intergenic |
| GCCGAAAGAGACGTGGAGAG+AGG | 0.610172 | 7.3:-6993632 | None:intergenic |
| TATTATGGAAGAGAAGCTGA+AGG | 0.610603 | 7.3:+6996446 | MS.gene007078:CDS |
| TTGAATTTAGTTTACTTCGG+GGG | 0.612433 | 7.3:+6996141 | MS.gene007078:intron |
| TGTAAAATATGTTGTTGGAG+TGG | 0.614667 | 7.3:+6993684 | MS.gene007078:CDS |
| ACACTAGACAAGTGCAGCTG+AGG | 0.616702 | 7.3:-6996757 | None:intergenic |
| ATATTGTAGCAAAGCACCCA+AGG | 0.617688 | 7.3:+6995461 | MS.gene007078:CDS |
| TTAGGATAGACAGATCCTGT+CGG | 0.618575 | 7.3:-6995415 | None:intergenic |
| TTGCGGGGAGAGATTGGTGA+GGG | 0.619268 | 7.3:-6993603 | None:intergenic |
| ACTAGGCTATGCTGGTGGAG+AGG | 0.620996 | 7.3:+6996204 | MS.gene007078:CDS |
| GTTGTTATATAACATGTTGG+TGG | 0.621331 | 7.3:-6993560 | None:intergenic |
| TTAGTTACCCAGAAATGGCA+AGG | 0.624335 | 7.3:+6995266 | MS.gene007078:CDS |
| GGTTTGAGCCGAAAGAGACG+TGG | 0.630579 | 7.3:-6993639 | None:intergenic |
| TTCTCTAAATGCTTTCACCA+TGG | 0.638071 | 7.3:-6996236 | None:intergenic |
| TGGAGAGGTTGTTTCTACCA+TGG | 0.638313 | 7.3:+6996219 | MS.gene007078:CDS |
| GCCTGCTTGAACAAGAGCGG+TGG | 0.640534 | 7.3:-6993842 | None:intergenic |
| AGGGAAAGAGATTCCACATG+TGG | 0.649668 | 7.3:-6993584 | None:intergenic |
| TCAGGACTAGGCTATGCTGG+TGG | 0.663983 | 7.3:+6996199 | MS.gene007078:CDS |
| AACGCCTGCTTGAACAAGAG+CGG | 0.668953 | 7.3:-6993845 | None:intergenic |
| TTTGCGGGGAGAGATTGGTG+AGG | 0.672165 | 7.3:-6993604 | None:intergenic |
| TGAAAGCATTTAGAGAACGA+AGG | 0.676649 | 7.3:+6996242 | MS.gene007078:CDS |
| CAATTCATGAAGGACACACA+AGG | 0.683946 | 7.3:+6994876 | MS.gene007078:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGATATTATATTATATG+CGG | + | chr7.3:6996095-6996114 | MS.gene007078:intron | 10.0% |
| !! | TATAAATTATGAAATAAACT+TGG | + | chr7.3:6995793-6995812 | MS.gene007078:intron | 10.0% |
| !! | AAATCAACATCTAATATTAT+CGG | - | chr7.3:6994994-6995013 | None:intergenic | 15.0% |
| !! | CAATTTACAAAAGAAAATAA+TGG | - | chr7.3:6994330-6994349 | None:intergenic | 15.0% |
| !!! | TTATTGAATTTAGTTTACTT+CGG | + | chr7.3:6996138-6996157 | MS.gene007078:intron | 15.0% |
| !! | AAAAAAAAATTAGAAGCCTT+AGG | - | chr7.3:6995824-6995843 | None:intergenic | 20.0% |
| !! | ACGAATATGGTTAAAATTAA+AGG | - | chr7.3:6996030-6996049 | None:intergenic | 20.0% |
| !! | ATGATGATATAAGTTATGTT+TGG | + | chr7.3:6994549-6994568 | MS.gene007078:intron | 20.0% |
| !! | CGAATATGGTTAAAATTAAA+GGG | - | chr7.3:6996029-6996048 | None:intergenic | 20.0% |
| !! | TAAATCATCATTATCAGAAA+CGG | - | chr7.3:6993749-6993768 | None:intergenic | 20.0% |
| !! | TATTTGTATCGAATACATAT+TGG | + | chr7.3:6994014-6994033 | MS.gene007078:intron | 20.0% |
| !! | TCATAATTTATAACCATACT+AGG | - | chr7.3:6995785-6995804 | None:intergenic | 20.0% |
| !!! | TATTGAATTTAGTTTACTTC+GGG | + | chr7.3:6996139-6996158 | MS.gene007078:intron | 20.0% |
| !!! | TGTTTAGTTAAGTTGTTTAT+TGG | + | chr7.3:6994802-6994821 | MS.gene007078:intron | 20.0% |
| ! | AAATTATCAGATATTGACGT+TGG | - | chr7.3:6995319-6995338 | None:intergenic | 25.0% |
| ! | AGTACTGTAAAATATGTTGT+TGG | + | chr7.3:6993679-6993698 | MS.gene007078:CDS | 25.0% |
| ! | ATAAGATGAAGCTTAGAATA+CGG | - | chr7.3:6995965-6995984 | None:intergenic | 25.0% |
| ! | ATACATATGTGAGAAATTAG+TGG | + | chr7.3:6994147-6994166 | MS.gene007078:intron | 25.0% |
| ! | ATCTATGATACCAATATTTC+AGG | + | chr7.3:6995219-6995238 | MS.gene007078:intron | 25.0% |
| ! | ATCTCTTCAAGTAATTTCTT+AGG | - | chr7.3:6995436-6995455 | None:intergenic | 25.0% |
| ! | ATGCTGAAATAAAATGTTTC+GGG | - | chr7.3:6995895-6995914 | None:intergenic | 25.0% |
| ! | ATTATGGATTCAAGAAGTTT+GGG | - | chr7.3:6995352-6995371 | None:intergenic | 25.0% |
| ! | CATGCTGAAATAAAATGTTT+CGG | - | chr7.3:6995896-6995915 | None:intergenic | 25.0% |
| ! | CCAGTAAATAAGTTCAAATA+AGG | - | chr7.3:6994579-6994598 | None:intergenic | 25.0% |
| ! | GATCAGATTATTGTTAGTAA+TGG | + | chr7.3:6995072-6995091 | MS.gene007078:CDS | 25.0% |
| ! | GCAATTTGTCATAAACTAAA+AGG | + | chr7.3:6994935-6994954 | MS.gene007078:CDS | 25.0% |
| ! | TAAAGTTATACTTCTCTGAT+GGG | + | chr7.3:6995491-6995510 | MS.gene007078:intron | 25.0% |
| ! | TATTATGGATTCAAGAAGTT+TGG | - | chr7.3:6995353-6995372 | None:intergenic | 25.0% |
| ! | TCACTCTTAAATAACGAATA+TGG | - | chr7.3:6996043-6996062 | None:intergenic | 25.0% |
| ! | TTAGTTTATGACAAATTGCT+TGG | - | chr7.3:6994934-6994953 | None:intergenic | 25.0% |
| ! | TTGAATCCATAATAAGTGAA+AGG | + | chr7.3:6995359-6995378 | MS.gene007078:CDS | 25.0% |
| !! | AACATATTTTACAGTACTGT+GGG | - | chr7.3:6993677-6993696 | None:intergenic | 25.0% |
| !! | ATTGAATTTAGTTTACTTCG+GGG | + | chr7.3:6996140-6996159 | MS.gene007078:intron | 25.0% |
| !! | CCTTATTTGAACTTATTTAC+TGG | + | chr7.3:6994576-6994595 | MS.gene007078:intron | 25.0% |
| !! | GTTAGTTTGATTGTATTGTA+TGG | + | chr7.3:6994957-6994976 | MS.gene007078:intron | 25.0% |
| !! | TCTGCAAAATCAATCAATTT+TGG | - | chr7.3:6995027-6995046 | None:intergenic | 25.0% |
| !! | TCTTATAGCTTGTATGAAAA+CGG | + | chr7.3:6994703-6994722 | MS.gene007078:intron | 25.0% |
| !! | TTAAGTTGTTTATTGGAACA+TGG | + | chr7.3:6994809-6994828 | MS.gene007078:intron | 25.0% |
| !!! | AAAATTGATTGATTTTGCAG+AGG | + | chr7.3:6995026-6995045 | MS.gene007078:intron | 25.0% |
| !!! | AAACATTTTATTTCAGCATG+TGG | + | chr7.3:6995896-6995915 | MS.gene007078:CDS | 25.0% |
| !!! | ACAGCTTTTAAGATTTTAAG+TGG | - | chr7.3:6995556-6995575 | None:intergenic | 25.0% |
| !!! | CTTCAAAAAGTGTATTTTAC+TGG | + | chr7.3:6994083-6994102 | MS.gene007078:intron | 25.0% |
| !!! | TTTTATGTCTGTTTAGCTTA+TGG | + | chr7.3:6994608-6994627 | MS.gene007078:intron | 25.0% |
| AACCTTAGAAAATCCATTCA+CGG | - | chr7.3:6995682-6995701 | None:intergenic | 30.0% | |
| AATAAACTTGGATGATCCTA+AGG | + | chr7.3:6995805-6995824 | MS.gene007078:intron | 30.0% | |
| ATAACTTTACCAAAAGCCTT+GGG | - | chr7.3:6995480-6995499 | None:intergenic | 30.0% | |
| ATTGAAAAAACCTACGAAGT+AGG | - | chr7.3:6994531-6994550 | None:intergenic | 30.0% | |
| CATAAGCTGAAAACAAATCA+AGG | - | chr7.3:6994647-6994666 | None:intergenic | 30.0% | |
| GAGTATGCAAATAAACTAGA+AGG | - | chr7.3:6996333-6996352 | None:intergenic | 30.0% | |
| GGAATAATGACCTGAAATAT+TGG | - | chr7.3:6995232-6995251 | None:intergenic | 30.0% | |
| GTAAAGTTATACTTCTCTGA+TGG | + | chr7.3:6995490-6995509 | MS.gene007078:intron | 30.0% | |
| GTTGTTATATAACATGTTGG+TGG | - | chr7.3:6993563-6993582 | None:intergenic | 30.0% | |
| TATAACTTTACCAAAAGCCT+TGG | - | chr7.3:6995481-6995500 | None:intergenic | 30.0% | |
| TATTGGATATCCATACTTTG+TGG | + | chr7.3:6994031-6994050 | MS.gene007078:intron | 30.0% | |
| TCTTGACCTTTCACTTATTA+TGG | - | chr7.3:6995368-6995387 | None:intergenic | 30.0% | |
| TGCAATACGTTACATATACA+TGG | - | chr7.3:6994494-6994513 | None:intergenic | 30.0% | |
| TGTAAAATATGTTGTTGGAG+TGG | + | chr7.3:6993684-6993703 | MS.gene007078:CDS | 30.0% | |
| TGTCAATATCTGTTGCATAA+AGG | + | chr7.3:6996500-6996519 | MS.gene007078:CDS | 30.0% | |
| TTATATAACAACACCACATG+TGG | + | chr7.3:6993571-6993590 | MS.gene007078:CDS | 30.0% | |
| TTATGTTGCATATCCTAGTA+TGG | + | chr7.3:6995769-6995788 | MS.gene007078:intron | 30.0% | |
| ! | ACATATTTTACAGTACTGTG+GGG | - | chr7.3:6993676-6993695 | None:intergenic | 30.0% |
| ! | ATTGATTTCAGCTCCTATTA+TGG | + | chr7.3:6996431-6996450 | MS.gene007078:CDS | 30.0% |
| ! | CAACATATTTTACAGTACTG+TGG | - | chr7.3:6993678-6993697 | None:intergenic | 30.0% |
| ! | TATACTTTCTATGGTAGTGT+AGG | + | chr7.3:6994841-6994860 | MS.gene007078:intron | 30.0% |
| ! | TTGAATTTAGTTTACTTCGG+GGG | + | chr7.3:6996141-6996160 | MS.gene007078:intron | 30.0% |
| !! | AAAAGTTTTAGCGAAATCGA+TGG | + | chr7.3:6996277-6996296 | MS.gene007078:CDS | 30.0% |
| !! | ACTTTTTGAAGATACTTCCA+AGG | - | chr7.3:6994074-6994093 | None:intergenic | 30.0% |
| !! | GGTGTTGTTATATAACATGT+TGG | - | chr7.3:6993566-6993585 | None:intergenic | 30.0% |
| !!! | GTCTCCATTTTAGAGTATTT+GGG | - | chr7.3:6993993-6994012 | None:intergenic | 30.0% |
| ACGAAGTAGGATACATAGTA+CGG | - | chr7.3:6994518-6994537 | None:intergenic | 35.0% | |
| AGCGAACATAAAAGAGCAAA+AGG | - | chr7.3:6996355-6996374 | None:intergenic | 35.0% | |
| AGTGGAACTACATTCAAAGA+TGG | - | chr7.3:6995538-6995557 | None:intergenic | 35.0% | |
| ATGTGGAAAGATTCAAAGTC+AGG | + | chr7.3:6995913-6995932 | MS.gene007078:CDS | 35.0% | |
| CAGAAAGAGAACATGACATA+TGG | - | chr7.3:6995708-6995727 | None:intergenic | 35.0% | |
| CATATGTCATGTTCTCTTTC+TGG | + | chr7.3:6995706-6995725 | MS.gene007078:intron | 35.0% | |
| CCAAAGGGTTATACTTTCTA+TGG | + | chr7.3:6994832-6994851 | MS.gene007078:intron | 35.0% | |
| CCATACTTTGTGGATACTTA+CGG | + | chr7.3:6994041-6994060 | MS.gene007078:intron | 35.0% | |
| CTATGTTAGTTACCCAGAAA+TGG | + | chr7.3:6995261-6995280 | MS.gene007078:CDS | 35.0% | |
| GAAACTTCTGTGCATACATT+TGG | + | chr7.3:6996070-6996089 | MS.gene007078:intron | 35.0% | |
| GGGATTAATGCAATTCATGA+AGG | + | chr7.3:6994866-6994885 | MS.gene007078:CDS | 35.0% | |
| TAACATTGTGTTTCGTCTAC+AGG | + | chr7.3:6996614-6996633 | MS.gene007078:intron | 35.0% | |
| TAACTAACATAGAATGGAGC+TGG | - | chr7.3:6995253-6995272 | None:intergenic | 35.0% | |
| TACTATGTATCCTACTTCGT+AGG | + | chr7.3:6994518-6994537 | MS.gene007078:intron | 35.0% | |
| TAGAGAACGAAGGAATTACT+TGG | + | chr7.3:6996252-6996271 | MS.gene007078:CDS | 35.0% | |
| TATCAGATATTGACGTTGGA+AGG | - | chr7.3:6995315-6995334 | None:intergenic | 35.0% | |
| TATTATGGAAGAGAAGCTGA+AGG | + | chr7.3:6996446-6996465 | MS.gene007078:CDS | 35.0% | |
| TATTGACGTTGGAAGGATAA+CGG | - | chr7.3:6995308-6995327 | None:intergenic | 35.0% | |
| TCTGGGTAACTAACATAGAA+TGG | - | chr7.3:6995259-6995278 | None:intergenic | 35.0% | |
| TGTCATTATATGAGCATACC+TGG | - | chr7.3:6996526-6996545 | None:intergenic | 35.0% | |
| TTCAGCTTCTCTTCCATAAT+AGG | - | chr7.3:6996447-6996466 | None:intergenic | 35.0% | |
| TTCTCTAAATGCTTTCACCA+TGG | - | chr7.3:6996239-6996258 | None:intergenic | 35.0% | |
| TTTATTGGAACATGGCCAAA+GGG | + | chr7.3:6994817-6994836 | MS.gene007078:intron | 35.0% | |
| ! | ATACTTTATTTCCGCTTGCA+GGG | + | chr7.3:6996392-6996411 | MS.gene007078:intron | 35.0% |
| ! | CAAGAAGTTTGGGATCTAAA+AGG | - | chr7.3:6995342-6995361 | None:intergenic | 35.0% |
| ! | CAAGCCCAAATACTCTAAAA+TGG | + | chr7.3:6993986-6994005 | MS.gene007078:intron | 35.0% |
| ! | CATATTTTACAGTACTGTGG+GGG | - | chr7.3:6993675-6993694 | None:intergenic | 35.0% |
| ! | CCATAGAAAGTATAACCCTT+TGG | - | chr7.3:6994835-6994854 | None:intergenic | 35.0% |
| ! | TATACTTTATTTCCGCTTGC+AGG | + | chr7.3:6996391-6996410 | MS.gene007078:intron | 35.0% |
| !! | AACCGTGAATGGATTTTCTA+AGG | + | chr7.3:6995677-6995696 | MS.gene007078:CDS | 35.0% |
| !! | AGCTTTCTGAGATATACTAC+TGG | - | chr7.3:6996167-6996186 | None:intergenic | 35.0% |
| !! | ATTCTAAAGTTCCCGCATTA+CGG | - | chr7.3:6994907-6994926 | None:intergenic | 35.0% |
| !! | ATTGATTTTGCAGAGGAGAA+TGG | + | chr7.3:6995033-6995052 | MS.gene007078:intron | 35.0% |
| !! | TCTTAAAAGCTGTTTTGTGC+AGG | + | chr7.3:6995563-6995582 | MS.gene007078:intron | 35.0% |
| !! | TGAAAGCATTTAGAGAACGA+AGG | + | chr7.3:6996242-6996261 | MS.gene007078:CDS | 35.0% |
| !! | TGAAGGTTTTGGCAAAATTG+AGG | + | chr7.3:6996463-6996482 | MS.gene007078:CDS | 35.0% |
| !!! | CATTTTAGAGTATTTGGGCT+TGG | - | chr7.3:6993988-6994007 | None:intergenic | 35.0% |
| !!! | CGTCTCCATTTTAGAGTATT+TGG | - | chr7.3:6993994-6994013 | None:intergenic | 35.0% |
| AATAAAATGCTCCCTGCAAG+CGG | - | chr7.3:6996406-6996425 | None:intergenic | 40.0% | |
| ACAGCAGGTGTATCAAAATC+AGG | - | chr7.3:6993898-6993917 | None:intergenic | 40.0% | |
| ATACTTACGGATATGCACCT+TGG | + | chr7.3:6994054-6994073 | MS.gene007078:intron | 40.0% | |
| ATATCTGTTGCATAAAGGCC+AGG | + | chr7.3:6996505-6996524 | MS.gene007078:CDS | 40.0% | |
| ATTGACGTTGGAAGGATAAC+GGG | - | chr7.3:6995307-6995326 | None:intergenic | 40.0% | |
| CAATTCATGAAGGACACACA+AGG | + | chr7.3:6994876-6994895 | MS.gene007078:CDS | 40.0% | |
| CCGTAAGTATCCACAAAGTA+TGG | - | chr7.3:6994044-6994063 | None:intergenic | 40.0% | |
| CGAAGTAGGATACATAGTAC+GGG | - | chr7.3:6994517-6994536 | None:intergenic | 40.0% | |
| CTTGATTTCCTCTTGCTACA+AGG | + | chr7.3:6995985-6996004 | MS.gene007078:intron | 40.0% | |
| GATAAAACGCTAACCGTGAA+TGG | + | chr7.3:6995666-6995685 | MS.gene007078:CDS | 40.0% | |
| GTTATAGACACAGTCCTTGA+AGG | - | chr7.3:6993814-6993833 | None:intergenic | 40.0% | |
| GTTTATTGGAACATGGCCAA+AGG | + | chr7.3:6994816-6994835 | MS.gene007078:intron | 40.0% | |
| TCAATGCTGTGAAACCTTCA+AGG | + | chr7.3:6993797-6993816 | MS.gene007078:CDS | 40.0% | |
| TGCATCTTTACCTGGAATGT+GGG | + | chr7.3:6995644-6995663 | MS.gene007078:CDS | 40.0% | |
| TGGGTGCTTTGCTACAATAT+GGG | - | chr7.3:6995461-6995480 | None:intergenic | 40.0% | |
| TGTTGAAATATCCGAACCAC+AGG | + | chr7.3:6996300-6996319 | MS.gene007078:CDS | 40.0% | |
| TTAGGATAGACAGATCCTGT+CGG | - | chr7.3:6995418-6995437 | None:intergenic | 40.0% | |
| TTAGTTACCCAGAAATGGCA+AGG | + | chr7.3:6995266-6995285 | MS.gene007078:CDS | 40.0% | |
| TTGCATCTTTACCTGGAATG+TGG | + | chr7.3:6995643-6995662 | MS.gene007078:CDS | 40.0% | |
| TTGGGTGCTTTGCTACAATA+TGG | - | chr7.3:6995462-6995481 | None:intergenic | 40.0% | |
| ! | ATATTGTAGCAAAGCACCCA+AGG | + | chr7.3:6995461-6995480 | MS.gene007078:CDS | 40.0% |
| ! | TTAGAGTATTTGGGCTTGGT+AGG | - | chr7.3:6993984-6994003 | None:intergenic | 40.0% |
| ! | TTTCTATGGTAGTGTAGGCT+GGG | + | chr7.3:6994846-6994865 | MS.gene007078:intron | 40.0% |
| !! | ACTAGCTTTGCATCTTTACC+TGG | + | chr7.3:6995636-6995655 | MS.gene007078:CDS | 40.0% |
| !! | TTCTAAAGTTCCCGCATTAC+GGG | - | chr7.3:6994906-6994925 | None:intergenic | 40.0% |
| AAGCTATGCGCTAGAGCTTA+TGG | - | chr7.3:6994671-6994690 | None:intergenic | 45.0% | |
| AAGGATTCACACCTGTGGTT+CGG | - | chr7.3:6996314-6996333 | None:intergenic | 45.0% | |
| ACTAGAAGGATTCACACCTG+TGG | - | chr7.3:6996319-6996338 | None:intergenic | 45.0% | |
| ACTTCTCTGATGGGATCACA+AGG | + | chr7.3:6995500-6995519 | MS.gene007078:intron | 45.0% | |
| AGGCGTTCCTGTTATTCTCT+TGG | + | chr7.3:6993861-6993880 | MS.gene007078:CDS | 45.0% | |
| AGGGAAAGAGATTCCACATG+TGG | - | chr7.3:6993587-6993606 | None:intergenic | 45.0% | |
| CGTTCCTGTTATTCTCTTGG+CGG | + | chr7.3:6993864-6993883 | MS.gene007078:CDS | 45.0% | |
| CTTCTCTGATGGGATCACAA+GGG | + | chr7.3:6995501-6995520 | MS.gene007078:intron | 45.0% | |
| CTTGCTACAAGGCATGCAAA+AGG | + | chr7.3:6995996-6996015 | MS.gene007078:intron | 45.0% | |
| GAAATTAGTGGCGATGCACA+CGG | + | chr7.3:6994159-6994178 | MS.gene007078:intron | 45.0% | |
| TAGGATAGACAGATCCTGTC+GGG | - | chr7.3:6995417-6995436 | None:intergenic | 45.0% | |
| TTACCCAGAAATGGCAAGGA+TGG | + | chr7.3:6995270-6995289 | MS.gene007078:CDS | 45.0% | |
| TTTGCATGCCTTGTAGCAAG+AGG | - | chr7.3:6995996-6996015 | None:intergenic | 45.0% | |
| ! | AGCGTTTTATCCCACATTCC+AGG | - | chr7.3:6995657-6995676 | None:intergenic | 45.0% |
| ! | CTTTCTATGGTAGTGTAGGC+TGG | + | chr7.3:6994845-6994864 | MS.gene007078:intron | 45.0% |
| ! | GGAAGAGAAGCTGAAGGTTT+TGG | + | chr7.3:6996452-6996471 | MS.gene007078:CDS | 45.0% |
| ! | TAGCCATCCTTGCCATTTCT+GGG | - | chr7.3:6995276-6995295 | None:intergenic | 45.0% |
| ! | TTAGCCATCCTTGCCATTTC+TGG | - | chr7.3:6995277-6995296 | None:intergenic | 45.0% |
| !! | TGGAGAGGTTGTTTCTACCA+TGG | + | chr7.3:6996219-6996238 | MS.gene007078:CDS | 45.0% |
| AAAGCTGCAGTTGCTGCATC+AGG | + | chr7.3:6996181-6996200 | MS.gene007078:CDS | 50.0% | |
| AACGCCTGCTTGAACAAGAG+CGG | - | chr7.3:6993848-6993867 | None:intergenic | 50.0% | |
| ACAAGGTACACCCGTAATGC+GGG | + | chr7.3:6994893-6994912 | MS.gene007078:CDS | 50.0% | |
| ACAAGTGCAGCTGAGGTAAG+AGG | - | chr7.3:6996753-6996772 | None:intergenic | 50.0% | |
| AGCATCTCTTCCTACCCTAC+AGG | + | chr7.3:6996695-6996714 | MS.gene007078:CDS | 50.0% | |
| AGCCCTTTGCAATGACTGGT+TGG | + | chr7.3:6995849-6995868 | MS.gene007078:intron | 50.0% | |
| AGGGGATGAGGTGAGTAAAG+GGG | + | chr7.3:6995140-6995159 | MS.gene007078:intron | 50.0% | |
| CAAGTGCAGCTGAGGTAAGA+GGG | - | chr7.3:6996752-6996771 | None:intergenic | 50.0% | |
| CACAAGGTACACCCGTAATG+CGG | + | chr7.3:6994892-6994911 | MS.gene007078:CDS | 50.0% | |
| CAGGGGATGAGGTGAGTAAA+GGG | + | chr7.3:6995139-6995158 | MS.gene007078:intron | 50.0% | |
| CGCCAACCAGTCATTGCAAA+GGG | - | chr7.3:6995854-6995873 | None:intergenic | 50.0% | |
| GCAAAGCTAGTGTGTGTTGC+TGG | - | chr7.3:6995627-6995646 | None:intergenic | 50.0% | |
| TACACCTGCTGTCATAGCTC+AGG | + | chr7.3:6993906-6993925 | MS.gene007078:CDS | 50.0% | |
| TCTCTCTACAGCTGCCTGTA+GGG | - | chr7.3:6996712-6996731 | None:intergenic | 50.0% | |
| TGCCTGAGCAATACTCTGCT+TGG | - | chr7.3:6995100-6995119 | None:intergenic | 50.0% | |
| TTCTCTCTACAGCTGCCTGT+AGG | - | chr7.3:6996713-6996732 | None:intergenic | 50.0% | |
| ! | ACAGATCCTGTCGGGTTAGA+CGG | - | chr7.3:6995409-6995428 | None:intergenic | 50.0% |
| ! | ATGCTTGCAGTTTGCTCTCC+AGG | + | chr7.3:6995120-6995139 | MS.gene007078:CDS | 50.0% |
| ! | CCTTTGCAATGACTGGTTGG+CGG | + | chr7.3:6995852-6995871 | MS.gene007078:CDS | 50.0% |
| ! | TGCTTGCAGTTTGCTCTCCA+GGG | + | chr7.3:6995121-6995140 | MS.gene007078:CDS | 50.0% |
| !! | AGCAAAGCACCCAAGGCTTT+TGG | + | chr7.3:6995468-6995487 | MS.gene007078:CDS | 50.0% |
| !! | AGCCAAGCAGAGTATTGCTC+AGG | + | chr7.3:6995095-6995114 | MS.gene007078:CDS | 50.0% |
| !! | GGTTTCACAGCATTGACTCG+TGG | - | chr7.3:6993793-6993812 | None:intergenic | 50.0% |
| !! | TGGCGGCTTGGTTATATTGC+AGG | + | chr7.3:6995869-6995888 | MS.gene007078:CDS | 50.0% |
| ACTAGGCTATGCTGGTGGAG+AGG | + | chr7.3:6996204-6996223 | MS.gene007078:CDS | 55.0% | |
| CAGACCTGAGCTATGACAGC+AGG | - | chr7.3:6993913-6993932 | None:intergenic | 55.0% | |
| CAGACTTTGCGGGGAGAGAT+TGG | - | chr7.3:6993612-6993631 | None:intergenic | 55.0% | |
| CCAGCCGCCAAGAGAATAAC+AGG | - | chr7.3:6993871-6993890 | None:intergenic | 55.0% | |
| CCAGGGGATGAGGTGAGTAA+AGG | + | chr7.3:6995138-6995157 | MS.gene007078:intron | 55.0% | |
| CCGCCAACCAGTCATTGCAA+AGG | - | chr7.3:6995855-6995874 | None:intergenic | 55.0% | |
| CCTGTTATTCTCTTGGCGGC+TGG | + | chr7.3:6993868-6993887 | MS.gene007078:CDS | 55.0% | |
| CCTTTACTCACCTCATCCCC+TGG | - | chr7.3:6995141-6995160 | None:intergenic | 55.0% | |
| CTGCAGCCCTTTGCAATGAC+TGG | + | chr7.3:6995845-6995864 | MS.gene007078:intron | 55.0% | |
| GCAGTTGCTGCATCAGGACT+AGG | + | chr7.3:6996187-6996206 | MS.gene007078:CDS | 55.0% | |
| GCATCAGGACTAGGCTATGC+TGG | + | chr7.3:6996196-6996215 | MS.gene007078:CDS | 55.0% | |
| GCCTCTCTCCACGTCTCTTT+CGG | + | chr7.3:6993631-6993650 | MS.gene007078:CDS | 55.0% | |
| GGAGTGGAGCAGAACAGAAG+AGG | + | chr7.3:6993700-6993719 | MS.gene007078:CDS | 55.0% | |
| GGTTTGAGCCGAAAGAGACG+TGG | - | chr7.3:6993642-6993661 | None:intergenic | 55.0% | |
| GTGGAGAGAGGCAGACTTTG+CGG | - | chr7.3:6993623-6993642 | None:intergenic | 55.0% | |
| TACAGGTCGCACTTGTGCCA+GGG | + | chr7.3:6996631-6996650 | MS.gene007078:intron | 55.0% | |
| TACAGTACTGTGGGGGAACG+TGG | - | chr7.3:6993668-6993687 | None:intergenic | 55.0% | |
| TACTGTGGGGGAACGTGGAA+AGG | - | chr7.3:6993663-6993682 | None:intergenic | 55.0% | |
| TCAGGACTAGGCTATGCTGG+TGG | + | chr7.3:6996199-6996218 | MS.gene007078:CDS | 55.0% | |
| TCTACAGCTGCCTGTAGGGT+AGG | - | chr7.3:6996708-6996727 | None:intergenic | 55.0% | |
| TGGAGAGAGGCAGACTTTGC+GGG | - | chr7.3:6993622-6993641 | None:intergenic | 55.0% | |
| TTGCGGGGAGAGATTGGTGA+GGG | - | chr7.3:6993606-6993625 | None:intergenic | 55.0% | |
| TTTGCGGGGAGAGATTGGTG+AGG | - | chr7.3:6993607-6993626 | None:intergenic | 55.0% | |
| ! | AGTTTGCTCTCCAGGGGATG+AGG | + | chr7.3:6995128-6995147 | MS.gene007078:CDS | 55.0% |
| ! | GCTTGCAGTTTGCTCTCCAG+GGG | + | chr7.3:6995122-6995141 | MS.gene007078:CDS | 55.0% |
| CTACAGGTCGCACTTGTGCC+AGG | + | chr7.3:6996630-6996649 | MS.gene007078:intron | 60.0% | |
| GCCACCGCTCTTGTTCAAGC+AGG | + | chr7.3:6993841-6993860 | MS.gene007078:CDS | 60.0% | |
| GCCGAAAGAGACGTGGAGAG+AGG | - | chr7.3:6993635-6993654 | None:intergenic | 60.0% | |
| GCCTGCTTGAACAAGAGCGG+TGG | - | chr7.3:6993845-6993864 | None:intergenic | 60.0% | |
| GGAGAGAGGCAGACTTTGCG+GGG | - | chr7.3:6993621-6993640 | None:intergenic | 60.0% | |
| TCGTCTCCAGATGCACTCCC+TGG | - | chr7.3:6996651-6996670 | None:intergenic | 60.0% | |
| TGTTCGCCGTCTAACCCGAC+AGG | + | chr7.3:6995400-6995419 | MS.gene007078:CDS | 60.0% | |
| ! | CTTGTGCCAGGGAGTGCATC+TGG | + | chr7.3:6996642-6996661 | MS.gene007078:CDS | 60.0% |
| ! | GCAATGACTGGTTGGCGGCT+TGG | + | chr7.3:6995857-6995876 | MS.gene007078:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6993556 | 6996776 | 6993556 | ID=MS.gene007078 |
| chr7.3 | mRNA | 6993556 | 6996776 | 6993556 | ID=MS.gene007078.t1;Parent=MS.gene007078 |
| chr7.3 | exon | 6993556 | 6993927 | 6993556 | ID=MS.gene007078.t1.exon1;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6993556 | 6993927 | 6993556 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6994863 | 6994956 | 6994863 | ID=MS.gene007078.t1.exon2;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6994863 | 6994956 | 6994863 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6995046 | 6995149 | 6995046 | ID=MS.gene007078.t1.exon3;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6995046 | 6995149 | 6995046 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6995241 | 6995489 | 6995241 | ID=MS.gene007078.t1.exon4;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6995241 | 6995489 | 6995241 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6995585 | 6995698 | 6995585 | ID=MS.gene007078.t1.exon5;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6995585 | 6995698 | 6995585 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6995851 | 6995934 | 6995851 | ID=MS.gene007078.t1.exon6;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6995851 | 6995934 | 6995851 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6996151 | 6996321 | 6996151 | ID=MS.gene007078.t1.exon7;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6996151 | 6996321 | 6996151 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6996413 | 6996526 | 6996413 | ID=MS.gene007078.t1.exon8;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6996413 | 6996526 | 6996413 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| chr7.3 | exon | 6996636 | 6996776 | 6996636 | ID=MS.gene007078.t1.exon9;Parent=MS.gene007078.t1 |
| chr7.3 | CDS | 6996636 | 6996776 | 6996636 | ID=cds.MS.gene007078.t1;Parent=MS.gene007078.t1 |
| Gene Sequence |
| Protein sequence |
