AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031869

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031869.t1 MTR_3g072670 97.528 445 11 0 390 834 1 445 0.0 897
MS.gene031869.t1 MTR_3g072670 84.426 366 57 0 1 366 79 444 0.0 666
MS.gene031869.t1 MTR_3g072680 96.986 365 11 0 1 365 36 400 0.0 742
MS.gene031869.t1 MTR_3g072680 83.459 399 59 1 443 834 4 402 0.0 709
MS.gene031869.t1 MTR_3g072690 76.776 366 31 2 1 366 1 312 0.0 548
MS.gene031869.t1 MTR_3g072690 71.662 367 50 3 468 834 1 313 1.12e-180 521
MS.gene031869.t1 MTR_1g087760 39.848 394 221 5 452 832 4 394 3.25e-83 272
MS.gene031869.t1 MTR_1g087760 39.683 378 212 5 1 365 20 394 4.44e-76 253
MS.gene031869.t1 MTR_7g106830 28.947 456 287 14 408 832 15 464 1.02e-49 182
MS.gene031869.t1 MTR_7g106830 29.111 371 241 9 11 365 100 464 1.62e-44 167
MS.gene031869.t1 MTR_8g091280 30.513 390 247 10 461 832 83 466 1.09e-47 177
MS.gene031869.t1 MTR_8g091280 29.919 371 238 9 11 365 102 466 2.46e-44 167
MS.gene031869.t1 MTR_1807s0010 28.385 384 249 9 465 830 19 394 4.48e-33 132
MS.gene031869.t1 MTR_1807s0010 28.065 367 244 8 11 363 34 394 5.27e-32 129
MS.gene031869.t1 MTR_8g061360 24.194 372 255 9 478 829 43 407 2.73e-22 100
MS.gene031869.t1 MTR_8g061360 24.211 380 254 12 3 362 42 407 2.53e-21 97.8
MS.gene031869.t1 MTR_4g011820 25.432 405 257 17 452 834 6 387 3.75e-21 97.1
MS.gene031869.t1 MTR_4g011820 24.740 384 247 16 3 366 25 386 4.52e-19 90.9
MS.gene031869.t1 MTR_2g090615 25.414 362 245 12 485 829 57 410 9.50e-21 96.3
MS.gene031869.t1 MTR_2g090615 26.316 361 243 12 18 362 57 410 6.28e-20 93.6
MS.gene031869.t1 MTR_6g091760 24.928 345 224 15 46 363 96 432 9.55e-15 77.8
MS.gene031869.t1 MTR_6g091760 22.956 318 215 10 537 830 121 432 5.81e-13 72.4
MS.gene031869.t1 MTR_6g033540 26.073 303 185 13 527 820 101 373 1.10e-13 74.3
MS.gene031869.t1 MTR_6g033540 24.749 299 194 11 60 353 101 373 9.54e-13 71.2
MS.gene031869.t1 MTR_6g033540 25.743 303 186 13 527 820 131 403 1.11e-13 74.3
MS.gene031869.t1 MTR_6g033540 24.415 299 195 11 60 353 131 403 1.06e-12 71.2
MS.gene031869.t1 MTR_7g079080 25.130 386 243 16 46 393 94 471 2.29e-13 73.9
MS.gene031869.t1 MTR_8g098930 24.069 349 224 14 512 829 94 432 4.95e-13 72.8
MS.gene031869.t1 MTR_8g098930 22.989 348 227 13 46 362 95 432 3.63e-12 70.1
MS.gene031869.t1 MTR_8g101750 26.056 284 189 10 46 310 88 369 8.24e-13 72.0
MS.gene031869.t1 MTR_8g101750 23.485 264 186 7 530 777 106 369 3.09e-12 70.1
MS.gene031869.t1 MTR_3g103550 23.387 372 240 14 20 362 69 424 4.59e-12 69.7
MS.gene031869.t1 MTR_3g103550 21.774 372 246 13 487 829 69 424 3.27e-11 67.0
MS.gene031869.t1 MTR_7g079080 24.793 363 229 15 67 393 12 366 4.70e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031869.t1 AT1G77670 79.720 429 74 5 409 834 20 438 0.0 712
MS.gene031869.t1 AT1G77670 77.049 366 84 0 1 366 72 437 0.0 624
MS.gene031869.t1 AT2G22250 29.665 418 267 12 433 832 11 419 5.20e-52 188
MS.gene031869.t1 AT2G22250 29.570 372 240 9 11 366 55 420 2.92e-48 177
MS.gene031869.t1 AT2G22250 29.665 418 267 12 433 832 58 466 1.37e-51 188
MS.gene031869.t1 AT2G22250 29.570 372 240 9 11 366 102 467 6.33e-48 177
MS.gene031869.t1 AT2G22250 29.665 418 267 12 433 832 58 466 1.37e-51 188
MS.gene031869.t1 AT2G22250 29.570 372 240 9 11 366 102 467 6.33e-48 177
MS.gene031869.t1 AT5G36160 25.867 375 245 14 478 829 45 409 4.27e-24 106
MS.gene031869.t1 AT5G36160 25.414 362 247 11 17 362 55 409 2.13e-23 104
MS.gene031869.t1 AT2G20610 25.722 381 249 14 469 829 67 433 5.17e-24 106
MS.gene031869.t1 AT2G20610 23.896 385 251 15 2 362 67 433 1.90e-20 95.9
MS.gene031869.t1 AT4G28410 23.936 376 261 10 473 829 66 435 3.29e-23 104
MS.gene031869.t1 AT4G28410 24.672 381 253 11 2 362 69 435 3.07e-22 101
MS.gene031869.t1 AT2G24850 25.882 340 229 12 506 829 85 417 3.01e-22 101
MS.gene031869.t1 AT2G24850 25.595 336 222 12 70 389 115 438 1.13e-19 93.2
MS.gene031869.t1 AT2G20610 25.141 354 236 13 469 802 67 411 1.27e-21 99.4
MS.gene031869.t1 AT2G20610 24.336 226 163 6 2 224 67 287 3.95e-18 88.6
MS.gene031869.t1 AT4G28420 23.514 387 262 14 470 834 62 436 1.17e-20 96.3
MS.gene031869.t1 AT4G28420 23.483 379 256 14 3 361 62 426 1.56e-19 92.8
MS.gene031869.t1 AT5G53970 23.861 373 255 11 478 829 36 400 2.60e-20 94.7
MS.gene031869.t1 AT5G53970 23.936 376 251 11 11 362 36 400 1.83e-19 92.4
MS.gene031869.t1 AT4G28410 26.222 225 160 4 2 224 69 289 3.72e-20 94.7
MS.gene031869.t1 AT4G28410 22.841 359 256 10 473 812 66 422 5.16e-20 94.0
MS.gene031869.t1 AT4G23590 26.158 367 218 14 27 362 58 402 6.09e-19 90.9
MS.gene031869.t1 AT4G23590 24.860 358 234 10 494 829 58 402 1.03e-18 90.1
MS.gene031869.t1 AT1G80360 22.513 382 261 11 469 834 24 386 1.95e-18 89.0
MS.gene031869.t1 AT1G80360 23.547 344 230 11 2 328 24 351 4.08e-18 87.8
MS.gene031869.t1 AT1G80360 22.513 382 261 11 469 834 24 386 1.95e-18 89.0
MS.gene031869.t1 AT1G80360 23.547 344 230 11 2 328 24 351 4.08e-18 87.8
MS.gene031869.t1 AT1G80360 22.513 382 261 11 469 834 24 386 1.95e-18 89.0
MS.gene031869.t1 AT1G80360 23.547 344 230 11 2 328 24 351 4.08e-18 87.8
MS.gene031869.t1 AT1G80360 22.513 382 261 11 469 834 24 386 1.95e-18 89.0
MS.gene031869.t1 AT1G80360 23.547 344 230 11 2 328 24 351 4.08e-18 87.8
MS.gene031869.t1 AT4G28420 24.444 225 162 6 3 224 62 281 4.62e-18 87.8
MS.gene031869.t1 AT4G28420 23.556 225 164 6 470 691 62 281 3.20e-17 85.1
MS.gene031869.t1 AT4G23600 25.138 362 228 13 494 829 58 402 4.60e-17 85.1
MS.gene031869.t1 AT4G23600 23.184 358 240 11 27 362 58 402 9.52e-17 84.0
MS.gene031869.t1 AT4G23600 25.161 310 199 9 541 829 1 298 8.69e-16 79.7
MS.gene031869.t1 AT4G23600 24.204 314 197 12 74 362 1 298 5.64e-15 77.4
MS.gene031869.t1 AT4G23600 26.829 205 137 4 27 224 58 256 8.89e-15 77.4
MS.gene031869.t1 AT4G23600 25.076 331 210 12 494 798 58 376 1.31e-14 77.0
MS.gene031869.t1 AT4G37770 25.797 345 222 14 46 362 87 425 2.64e-14 76.6
MS.gene031869.t1 AT4G37770 24.259 371 247 14 486 829 62 425 3.44e-13 73.2
MS.gene031869.t1 AT4G08040 26.686 341 221 13 46 362 85 420 8.35e-14 75.1
MS.gene031869.t1 AT4G08040 24.561 342 229 13 512 829 84 420 4.75e-12 69.7
MS.gene031869.t1 AT5G51690 22.899 345 240 11 46 368 30 370 2.67e-13 72.8
MS.gene031869.t1 AT5G51690 23.167 341 234 13 513 830 30 365 6.33e-13 71.6
MS.gene031869.t1 AT5G51690 23.235 340 235 11 46 363 153 488 4.24e-13 73.2
MS.gene031869.t1 AT5G51690 23.167 341 234 13 513 830 153 488 9.06e-13 72.0
MS.gene031869.t1 AT3G49700 24.031 387 247 16 21 378 71 439 8.01e-13 72.0
MS.gene031869.t1 AT3G49700 23.656 372 239 15 488 830 71 426 8.82e-13 72.0
MS.gene031869.t1 AT2G22810 24.661 369 238 15 488 829 71 426 1.06e-12 71.6
MS.gene031869.t1 AT2G22810 24.854 342 230 12 46 362 87 426 1.61e-11 68.2
MS.gene031869.t1 AT3G61510 25.439 342 223 15 46 363 94 427 1.17e-11 68.6
MS.gene031869.t1 AT4G11280 23.684 342 230 15 46 362 98 433 2.98e-11 67.4
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 21 293 4.69e-11 65.5
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 21 293 4.69e-11 65.5
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 21 293 4.69e-11 65.5
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 21 293 4.69e-11 65.5
MS.gene031869.t1 AT1G71920 23.826 298 198 11 60 353 21 293 4.69e-11 65.5
MS.gene031869.t1 AT1G71920 23.826 298 198 11 60 353 21 293 4.69e-11 65.5
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 79 351 7.58e-11 65.1
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 79 351 7.58e-11 65.1
MS.gene031869.t1 AT1G71920 23.826 298 198 11 60 353 79 351 7.58e-11 65.1
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 134 406 8.62e-11 65.5
MS.gene031869.t1 AT5G10330 23.826 298 198 11 60 353 134 406 8.62e-11 65.5
MS.gene031869.t1 AT1G71920 23.826 298 198 11 60 353 134 406 8.62e-11 65.5
MS.gene031869.t1 AT1G71920 23.826 298 198 11 60 353 134 406 8.62e-11 65.5
MS.gene031869.t1 AT1G71920 23.826 298 198 11 60 353 132 404 8.93e-11 65.5

Find 237 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGCTTCCTTTACAAATTC+TGG 0.166218 3.3:+63023881 None:intergenic
ACCAGATTCTTTCCCTCTTC+TGG 0.169716 3.3:+63019551 None:intergenic
AAATTCTGGACCATCAAAAT+TGG 0.186348 3.3:+63023895 None:intergenic
ACTAGATTCTTCCCCTCTTC+TGG 0.194253 3.3:+63022942 None:intergenic
TATCGCAAAGAGAGCTATTT+TGG 0.198899 3.3:-63023132 MS.gene031869:CDS
TATGGCAAAGAGAGCTATTT+TGG 0.213807 3.3:-63019741 MS.gene031869:CDS
AGCAATGGGAGATGGGAATT+TGG 0.214772 3.3:+63021789 None:intergenic
CTTGCAGATCACACCCCTTT+TGG 0.237315 3.3:-63023050 MS.gene031869:CDS
AATCAGTATGCAAGGGGTTT+TGG 0.252107 3.3:-63023833 MS.gene031869:CDS
AAGGAAATTACTGTTACTTC+TGG 0.259379 3.3:-63020349 MS.gene031869:CDS
GCAATGGGAGATGGGAATTT+GGG 0.267704 3.3:+63021790 None:intergenic
GCAATCGCTGCAACTGTATT+AGG 0.275629 3.3:-63023707 MS.gene031869:CDS
TTCAAGTAAAATACACTTAA+AGG 0.276934 3.3:+63022966 None:intergenic
GTAACAGTAATTTCCTTATC+AGG 0.277606 3.3:+63023746 None:intergenic
GCTTCATACGAATCATAAAA+AGG 0.282721 3.3:+63020256 None:intergenic
GAGAGGTTTAAGAAAGATAC+TGG 0.303008 3.3:-63020391 MS.gene031869:CDS
TTGCATTGAGAATGATGTTC+TGG 0.306322 3.3:-63020050 MS.gene031869:CDS
TTGCATTGAGAATGATGTTC+TGG 0.306322 3.3:-63023441 MS.gene031869:CDS
AAGCTGCAATTCAAGCTATC+AGG 0.308373 3.3:-63023865 MS.gene031869:CDS
GCAAGGATGAAGGAACTCTT+AGG 0.314890 3.3:-63019514 MS.gene031869:CDS
AAGTCTGGACCATCAAAATT+TGG 0.315231 3.3:+63020505 None:intergenic
TGATAAGTTGGCATTTGATA+TGG 0.319352 3.3:-63020008 MS.gene031869:CDS
GGCACCATAAGAATCATAAA+AGG 0.324151 3.3:+63023646 None:intergenic
AATCAGTATGCTAGGGGTTA+TGG 0.333698 3.3:-63020442 MS.gene031869:CDS
TGACAATATCACTCCTTTGC+AGG 0.339654 3.3:-63021737 MS.gene031869:intron
CCCGTCCCTGATTGCTTGAA+TGG 0.339775 3.3:+63020468 None:intergenic
GGGAAGTCATTCTCCTTAAC+GGG 0.341836 3.3:-63023314 MS.gene031869:CDS
TCCTTGACTGGATGGAAAAT+CGG 0.347205 3.3:-63019911 MS.gene031869:CDS
GCTGCTTCCTTTACAAAGTC+TGG 0.355176 3.3:+63020490 None:intergenic
TGATGGCAAGCATACTCATT+TGG 0.355864 3.3:+63020560 None:intergenic
ATGGCTGGCGCAAAAGTAAA+AGG 0.356333 3.3:-63020223 MS.gene031869:CDS
TCATAAGTTGGCATTCGATA+TGG 0.360612 3.3:-63023399 MS.gene031869:CDS
ACGGTGACAATGAACTCATT+AGG 0.363636 3.3:-63019944 MS.gene031869:CDS
ACGGTGACAATGAACTCATT+AGG 0.363636 3.3:-63023335 MS.gene031869:CDS
TGAACTAAAGAGGGACTATA+TGG 0.367867 3.3:-63019759 MS.gene031869:CDS
GTTGTAGATCACACCCCTTT+TGG 0.368199 3.3:-63019659 MS.gene031869:CDS
ATTGAAGGCTGTTGGCTTCA+AGG 0.369387 3.3:-63019711 MS.gene031869:CDS
CAAGGACGAGGAAACTATTA+AGG 0.370324 3.3:-63022904 MS.gene031869:CDS
GATGGCAAGCATACTCATTT+GGG 0.373899 3.3:+63020561 None:intergenic
ACCGTCCGCTCGAACATTCC+TGG 0.379988 3.3:+63019962 None:intergenic
TCAATCGGGACAGCGAAATC+TGG 0.381339 3.3:+63023575 None:intergenic
GAGAGATTCAAGAAAGATAC+TGG 0.383980 3.3:-63023782 MS.gene031869:CDS
TTTCTTAAACCTCTCAGAAA+TGG 0.387948 3.3:+63020399 None:intergenic
ATTGAAGGCTGTTGGGTTCA+AGG 0.395573 3.3:-63023102 MS.gene031869:CDS
AGTTCAGTGTAATAAGAATC+TGG 0.396562 3.3:+63019776 None:intergenic
GTCGACTTCAACTCATCAAT+CGG 0.398128 3.3:+63023560 None:intergenic
ATTAATAGCTCCATGTTTGA+TGG 0.402263 3.3:+63020543 None:intergenic
ATTTCAATTGCTACTTTGCC+TGG 0.404821 3.3:-63023371 MS.gene031869:CDS
TGGAGCTATAAACCTTAGTC+AGG 0.404934 3.3:-63023924 MS.gene031869:CDS
TGGAGCTATTAATCTTGGTC+AGG 0.405859 3.3:-63020533 MS.gene031869:CDS
AAGCAGCCATTCAAGCAATC+AGG 0.417683 3.3:-63020474 MS.gene031869:CDS
TGAGGACTTCAACTCTTCAA+TGG 0.418539 3.3:+63020168 None:intergenic
TTTCCCATCCTTTGCAGTGT+GGG 0.418735 3.3:-63023211 MS.gene031869:CDS
AGCTCCACATAGTAAGAATC+TGG 0.422650 3.3:+63023167 None:intergenic
GTGGCGGCAGCAATGGGAGA+TGG 0.423928 3.3:+63021781 None:intergenic
AAGTCAGAAAGGAATCAAAT+TGG 0.429177 3.3:-63021944 MS.gene031869:CDS
AAGGAAATTACTGTTACATC+TGG 0.429368 3.3:-63023740 MS.gene031869:CDS
ATTTCAATTGCTTCTTTGCC+AGG 0.432311 3.3:-63019980 MS.gene031869:CDS
CGGTGACAATGAACTCATTA+GGG 0.433243 3.3:-63019943 MS.gene031869:CDS
CGGTGACAATGAACTCATTA+GGG 0.433243 3.3:-63023334 MS.gene031869:CDS
GACATGGTGGCGGCAGCAAT+GGG 0.438265 3.3:+63021775 None:intergenic
AAACATGGAGCTATTAATCT+TGG 0.439056 3.3:-63020538 MS.gene031869:CDS
ATTGAAATGAATAGTAGAAA+AGG 0.440172 3.3:+63021843 None:intergenic
TCCAGAAGAGGGAAAGAATC+TGG 0.440814 3.3:-63019552 MS.gene031869:CDS
GCAATTGCTGCAACTGTGTT+GGG 0.442485 3.3:-63020316 MS.gene031869:CDS
AGGGAAGTCATTCTCCTTAA+CGG 0.443160 3.3:-63023315 MS.gene031869:CDS
ACGAGTATTCTTTGAGATTG+AGG 0.445266 3.3:+63020150 None:intergenic
GTGAGGGGTATTTATAAGAA+TGG 0.445966 3.3:+63023517 None:intergenic
GCAATGACAATGTTGAGATC+TGG 0.447498 3.3:+63023806 None:intergenic
TCCAACCTTCCACCCCGTTA+AGG 0.449140 3.3:+63023301 None:intergenic
GGGAAGACATTCTCCTTGAC+TGG 0.450453 3.3:-63019923 MS.gene031869:CDS
CAGCCCCACACTGCAAAGGA+TGG 0.450947 3.3:+63023207 None:intergenic
GGACATGGTGGCGGCAGCAA+TGG 0.451566 3.3:+63021774 None:intergenic
TCCTTAACGGGGTGGAAGGT+TGG 0.453825 3.3:-63023302 MS.gene031869:CDS
GATTTGAGGTTGCAAAAGTC+AGG 0.454362 3.3:+63019834 None:intergenic
CTTAATGTGGGGAGTGCGAC+TGG 0.457236 3.3:-63023258 MS.gene031869:CDS
AGCCCACTGCATAGGATTTG+AGG 0.459195 3.3:+63019820 None:intergenic
GAGGAGAGAATGTGTGCAGC+AGG 0.461446 3.3:+63021894 None:intergenic
TTATGGTGCCACTTTATCCA+TGG 0.461803 3.3:-63023633 MS.gene031869:CDS
ACCGTCCGCTCGAACATTCC+AGG 0.462597 3.3:+63023353 None:intergenic
GAAATGGCAATGTTGAGGTC+TGG 0.462695 3.3:+63020415 None:intergenic
CTTATTACACTGAACTAAAG+AGG 0.466700 3.3:-63019769 MS.gene031869:CDS
CAATGGGAGATGGGAATTTG+GGG 0.466975 3.3:+63021791 None:intergenic
AATACCCCTCACAATCCTAC+TGG 0.467702 3.3:-63020115 MS.gene031869:CDS
GTTGAAGGATTGAAGGCTGT+TGG 0.468862 3.3:-63023110 MS.gene031869:CDS
TTGAAGGATTGAAGGCTGTT+GGG 0.469420 3.3:-63023109 MS.gene031869:CDS
TGACTGGATGGAAAATCGGC+TGG 0.469672 3.3:-63019907 MS.gene031869:CDS
TTTACTTTCTGCAAGGATGA+AGG 0.471888 3.3:-63019524 MS.gene031869:CDS
CTTAACATGGGGAGTGCGAC+AGG 0.474775 3.3:-63019867 MS.gene031869:CDS
CATCCTTGCAGAAAGTAAAT+CGG 0.476525 3.3:+63019528 None:intergenic
AATTCTGGACCATCAAAATT+GGG 0.478359 3.3:+63023896 None:intergenic
TTGAAATGAATAGTAGAAAA+GGG 0.480865 3.3:+63021844 None:intergenic
GCCTGGAATGTTCGAGCGGA+CGG 0.481257 3.3:-63023354 MS.gene031869:CDS
CTTACTATGTGGAGCTAAAG+AGG 0.481335 3.3:-63023160 MS.gene031869:CDS
AATACCCCTCACAACCCTAC+TGG 0.485181 3.3:-63023506 MS.gene031869:CDS
GAGGACTTCAACTCTTCAAT+GGG 0.485859 3.3:+63020169 None:intergenic
AATTGGGAAAGCCCTGACTA+AGG 0.487329 3.3:+63023912 None:intergenic
GTCTAGTGGAACCTACTTTG+TGG 0.491445 3.3:-63019681 MS.gene031869:CDS
GGTGCCACTTTATCCATGGC+TGG 0.493054 3.3:-63023629 MS.gene031869:CDS
AAGGGTAACGATTTATAAGA+AGG 0.493919 3.3:+63021862 None:intergenic
AGGAAATTACTGTTACTTCT+GGG 0.494376 3.3:-63020348 MS.gene031869:CDS
TAACGGGGTGGAAGGTTGGA+TGG 0.495813 3.3:-63023298 MS.gene031869:CDS
GAGCAAAGTCTGGAGGGCGC+AGG 0.502810 3.3:+63020194 None:intergenic
TGATGAAGTGTATCATAAGT+TGG 0.503345 3.3:-63023411 MS.gene031869:CDS
AAGAGGGGAAGAATCTAGTC+AGG 0.503919 3.3:-63022938 MS.gene031869:CDS
TACTGTTACTTCTGGGTGCA+CGG 0.504457 3.3:-63020341 MS.gene031869:CDS
GCCAGGAATGTTCGAGCGGA+CGG 0.505338 3.3:-63019963 MS.gene031869:CDS
TGATGAAGTGTATGATAAGT+TGG 0.507962 3.3:-63020020 MS.gene031869:CDS
ACTAATTGTAGATCCTGATA+AGG 0.508227 3.3:-63023759 MS.gene031869:CDS
TTCCCATCCTTTGCAGTGTG+GGG 0.508720 3.3:-63023210 MS.gene031869:CDS
GTTGAAGGATTGAAGGCTGT+TGG 0.509741 3.3:-63019719 MS.gene031869:CDS
AACAGCAGTGGACATGGTGG+CGG 0.511768 3.3:+63021765 None:intergenic
ACGGGAATAATCAGTATGCT+AGG 0.513864 3.3:-63020450 MS.gene031869:CDS
TGGCGGCAGCAATGGGAGAT+GGG 0.514849 3.3:+63021782 None:intergenic
CATTAAGTGTGGAGGCGCTA+TGG 0.515779 3.3:+63023274 None:intergenic
CAAAGTAGGTTCCACTAGAC+GGG 0.518051 3.3:+63019684 None:intergenic
AGCACCAGATTCTTACTATG+TGG 0.518355 3.3:-63023171 MS.gene031869:CDS
CGAATATCTAGTTAAGGAGG+TGG 0.518440 3.3:-63019612 MS.gene031869:CDS
CGCACCAGCCATGGATAAAG+TGG 0.520207 3.3:+63023625 None:intergenic
TCAATGGGTAGAGCAAAGTC+TGG 0.520555 3.3:+63020184 None:intergenic
TGTTAAGTGTGGAGGTGCTA+TGG 0.525056 3.3:+63019883 None:intergenic
TAGCACCTCCACACTTAACA+TGG 0.526143 3.3:-63019880 MS.gene031869:CDS
ATCTTTCCAGTAGGATTGTG+AGG 0.528488 3.3:+63020109 None:intergenic
AGACATTCTCCTTGACTGGA+TGG 0.528851 3.3:-63019919 MS.gene031869:CDS
TGCGCCAGCCATGGATAAAG+TGG 0.529328 3.3:+63020234 None:intergenic
GACTGGATGGAAAATCGGCT+GGG 0.530502 3.3:-63019906 MS.gene031869:CDS
CGAGTGAACATGTTTCCAGT+AGG 0.532797 3.3:+63023491 None:intergenic
GGAGAGAATGTGTGCAGCAG+GGG 0.532845 3.3:+63021896 None:intergenic
GCCATTCAAGCAATCAGGGA+CGG 0.533299 3.3:-63020469 MS.gene031869:CDS
CTATTAAGGCTGCTGTTGAA+AGG 0.533649 3.3:-63022890 MS.gene031869:CDS
CGCGAAGCATTAAGTCAGAA+AGG 0.535158 3.3:-63021955 MS.gene031869:CDS
CAAGGATGAAGGAACTCTTA+GGG 0.536161 3.3:-63019513 MS.gene031869:CDS
GCACCATAAGAATCATAAAA+GGG 0.536473 3.3:+63023647 None:intergenic
ATGGGAGATGGGAATTTGGG+GGG 0.538192 3.3:+63021793 None:intergenic
GTTTACTTTCTGCAAGGACG+AGG 0.538788 3.3:-63022916 MS.gene031869:CDS
ATTTCCCATCCTTTGCAGTG+TGG 0.540019 3.3:-63023212 MS.gene031869:CDS
CCATTCAAGCAATCAGGGAC+GGG 0.541030 3.3:-63020468 MS.gene031869:CDS
TAGCGCCTCCACACTTAATG+TGG 0.544673 3.3:-63023271 MS.gene031869:CDS
GGCACGAGTATTCTTTGAGA+TGG 0.546134 3.3:+63023538 None:intergenic
TTCAAGGTATTCCCGTCCAA+TGG 0.546743 3.3:-63023086 MS.gene031869:CDS
GCTGCAGCCCCACACTGCAA+AGG 0.548860 3.3:+63023203 None:intergenic
GAAGCCACTTTATCCATGGC+TGG 0.549682 3.3:-63020238 MS.gene031869:CDS
CTCAATGCAAAGAGAAGCGA+TGG 0.550862 3.3:+63020063 None:intergenic
GGAGCTATTAATCTTGGTCA+GGG 0.551954 3.3:-63020532 MS.gene031869:CDS
AGCAATTGCTGCAACTGTGT+TGG 0.552368 3.3:-63020317 MS.gene031869:CDS
GCAATTCAAGCTATCAGGGA+TGG 0.556773 3.3:-63023860 MS.gene031869:CDS
AGTATGCTTGCCATCAAACA+TGG 0.557282 3.3:-63020553 MS.gene031869:CDS
ATTCTCCTTAACGGGGTGGA+AGG 0.557345 3.3:-63023306 MS.gene031869:CDS
TGTTTCCAGTAGGGTTGTGA+GGG 0.557392 3.3:+63023501 None:intergenic
GCTAGCTGTAGACCCTGAAA+AGG 0.559538 3.3:-63020368 MS.gene031869:CDS
GTATGAAGCCACTTTATCCA+TGG 0.560328 3.3:-63020242 MS.gene031869:CDS
CGGGAATAATCAGTATGCTA+GGG 0.561122 3.3:-63020449 MS.gene031869:CDS
AACGGGGTGGAAGGTTGGAT+GGG 0.562198 3.3:-63023297 MS.gene031869:CDS
TGATGGTCCAGAATTTGTAA+AGG 0.563207 3.3:-63023888 MS.gene031869:CDS
AGCTGCAATTCAAGCTATCA+GGG 0.564260 3.3:-63023864 MS.gene031869:CDS
TTATTACACTGAACTAAAGA+GGG 0.567688 3.3:-63019768 MS.gene031869:CDS
GGCTGCTGTTGAAAGGATGA+AGG 0.567990 3.3:-63022883 MS.gene031869:CDS
ACAGCAGCAGCCCACTGCAT+AGG 0.568010 3.3:+63019812 None:intergenic
AAACAGAATAACCTCATCAC+CGG 0.568184 3.3:+63023673 None:intergenic
ACAAAGTAGGTTCCACTAGA+CGG 0.569906 3.3:+63019683 None:intergenic
ATGTTTCCAGTAGGGTTGTG+AGG 0.570582 3.3:+63023500 None:intergenic
AGCCCCACACTGCAAAGGAT+GGG 0.572186 3.3:+63023208 None:intergenic
TGATGGTCCAGACTTTGTAA+AGG 0.572265 3.3:-63020497 MS.gene031869:CDS
TAAATAGGATGAACCTGCAA+AGG 0.572640 3.3:+63021724 None:intergenic
AAACACGATAACCTCATCAC+CGG 0.572871 3.3:+63020282 None:intergenic
AGCAGCCATTCAAGCAATCA+GGG 0.573003 3.3:-63020473 MS.gene031869:CDS
ATGGGAATAATCAGTATGCA+AGG 0.573797 3.3:-63023841 MS.gene031869:CDS
GAGTGAACATGTTTCCAGTA+GGG 0.575009 3.3:+63023492 None:intergenic
CAATTCAAGCTATCAGGGAT+GGG 0.575114 3.3:-63023859 MS.gene031869:CDS
CGCACTCCCCATGTTAAGTG+TGG 0.576137 3.3:+63019872 None:intergenic
TGAGTGAACATCTTTCCAGT+AGG 0.577372 3.3:+63020100 None:intergenic
AGTCAGGTTTACTTTCTGCA+AGG 0.577645 3.3:-63022922 MS.gene031869:CDS
AGTTAAGGAGGTGGGAGTAG+TGG 0.579382 3.3:-63019603 MS.gene031869:CDS
TCGACTTCAACTCATCAATC+GGG 0.583078 3.3:+63023561 None:intergenic
GTGATCTACAACCACAAAGT+AGG 0.583391 3.3:+63019670 None:intergenic
AGTATGCTTGCCATCACACA+TGG 0.583773 3.3:-63023944 MS.gene031869:CDS
AGCGCCTCCACACTTAATGT+GGG 0.584458 3.3:-63023270 MS.gene031869:CDS
ATCGGGACAGCGAAATCTGG+AGG 0.584516 3.3:+63023578 None:intergenic
AGCAAAGTCTGGAGGGCGCA+GGG 0.585411 3.3:+63020195 None:intergenic
GGTCCGATTTACTTTCTGCA+AGG 0.586293 3.3:-63019531 MS.gene031869:CDS
GTATTAGGATTAATAAATCC+CGG 0.588469 3.3:-63023692 MS.gene031869:CDS
AGGAGAGAATGTGTGCAGCA+GGG 0.589039 3.3:+63021895 None:intergenic
TGGAAAGATGTTCACTCAAG+AGG 0.589240 3.3:-63020095 MS.gene031869:CDS
TATAAGAAGGAATGAATCTG+AGG 0.591102 3.3:+63021875 None:intergenic
TTCAAGGTATTCCCGTCTAG+TGG 0.593396 3.3:-63019695 MS.gene031869:CDS
ATTAATAAATCCCGGTGATG+AGG 0.595433 3.3:-63023684 MS.gene031869:CDS
TCTTTCCAGTAGGATTGTGA+GGG 0.595542 3.3:+63020110 None:intergenic
GTTTATAGCTCCATGTGTGA+TGG 0.597016 3.3:+63023934 None:intergenic
TTACTATGTGGAGCTAAAGA+GGG 0.603840 3.3:-63023159 MS.gene031869:CDS
AGCACCTCCACACTTAACAT+GGG 0.605376 3.3:-63019879 MS.gene031869:CDS
AACCTCAAATCCTATGCAGT+GGG 0.606106 3.3:-63019822 MS.gene031869:CDS
GGCTGCTGTTGAGAGAATGA+AGG 0.606830 3.3:-63019492 MS.gene031869:CDS
CGCACTCCCCACATTAAGTG+TGG 0.607801 3.3:+63023263 None:intergenic
AATGGGAGATGGGAATTTGG+GGG 0.609642 3.3:+63021792 None:intergenic
TTGCGAATATCTAGTTAAGG+AGG 0.612658 3.3:-63019615 MS.gene031869:CDS
TCTCAGAAATGGCAATGTTG+AGG 0.613036 3.3:+63020410 None:intergenic
ATTGATAAATCCCGGTGATG+AGG 0.613262 3.3:-63020293 MS.gene031869:CDS
TTCAAGTAAAACACACTGGT+AGG 0.614437 3.3:+63019575 None:intergenic
CAAAGGAGTGATATTGTCAG+TGG 0.615527 3.3:+63021741 None:intergenic
ACTCCCCATGTTAAGTGTGG+AGG 0.616008 3.3:+63019875 None:intergenic
TTGTGAATATCTAATTAAGG+AGG 0.616139 3.3:-63023006 MS.gene031869:CDS
CAACCTCAAATCCTATGCAG+TGG 0.616824 3.3:-63019823 MS.gene031869:CDS
AATTAAGGAGGTCGGTGTGG+CGG 0.620432 3.3:-63022994 MS.gene031869:CDS
TGGGTAGAGCAAAGTCTGGA+GGG 0.621948 3.3:+63020188 None:intergenic
AATGCTTCGCGAAGGTCACA+CGG 0.631960 3.3:+63021967 None:intergenic
AACACGATAACCTCATCACC+GGG 0.634794 3.3:+63020283 None:intergenic
TGGGAATAATCAGTATGCAA+GGG 0.635598 3.3:-63023840 MS.gene031869:CDS
ATGGGTAGAGCAAAGTCTGG+AGG 0.636061 3.3:+63020187 None:intergenic
AGTGGAAACAGCAGTGGACA+TGG 0.636832 3.3:+63021759 None:intergenic
AACAGAATAACCTCATCACC+GGG 0.636868 3.3:+63023674 None:intergenic
ACTCCCCACATTAAGTGTGG+AGG 0.638165 3.3:+63023266 None:intergenic
GGGAATAATCAGTATGCAAG+GGG 0.638567 3.3:-63023839 MS.gene031869:CDS
TGGAAACATGTTCACTCGAG+AGG 0.639098 3.3:-63023486 MS.gene031869:CDS
ATTGTCAGTGGAAACAGCAG+TGG 0.639763 3.3:+63021753 None:intergenic
TCGGGACAGCGAAATCTGGA+GGG 0.640395 3.3:+63023579 None:intergenic
TCTAATTAAGGAGGTCGGTG+TGG 0.640787 3.3:-63022997 MS.gene031869:CDS
CTTTGCCAGGAATGTTCGAG+CGG 0.643712 3.3:-63019967 MS.gene031869:CDS
GGGAATAATCAGTATGCTAG+GGG 0.645649 3.3:-63020448 MS.gene031869:CDS
TTTACTTGAATCCAGAAGAG+GGG 0.646076 3.3:-63022953 MS.gene031869:CDS
CTTTGCCTGGAATGTTCGAG+CGG 0.646894 3.3:-63023358 MS.gene031869:CDS
TCAACATTGCCATTTCTGAG+AGG 0.658762 3.3:-63020408 MS.gene031869:CDS
TGGATTCAAGTAAAACACAC+TGG 0.663871 3.3:+63019571 None:intergenic
AGAGGTTTAAGAAAGATACT+GGG 0.664954 3.3:-63020390 MS.gene031869:CDS
AGTCATTCTCCTTAACGGGG+TGG 0.665949 3.3:-63023310 MS.gene031869:CDS
GGAGCTATAAACCTTAGTCA+GGG 0.671461 3.3:-63023923 MS.gene031869:CDS
GCGCCTCCACACTTAATGTG+GGG 0.671863 3.3:-63023269 MS.gene031869:CDS
TCTGACTTAATGCTTCGCGA+AGG 0.672744 3.3:+63021959 None:intergenic
GCACCTCCACACTTAACATG+GGG 0.680545 3.3:-63019878 MS.gene031869:CDS
GTGTTGGGATTGATAAATCC+CGG 0.680931 3.3:-63020301 MS.gene031869:CDS
GAATATCTAGTTAAGGAGGT+GGG 0.681051 3.3:-63019611 MS.gene031869:CDS
CTTTCCAGTAGGATTGTGAG+GGG 0.686125 3.3:+63020111 None:intergenic
GTTTCCAGTAGGGTTGTGAG+GGG 0.689002 3.3:+63023502 None:intergenic
GAATATCTAATTAAGGAGGT+CGG 0.694506 3.3:-63023002 MS.gene031869:CDS
GGAAGTCATTCTCCTTAACG+GGG 0.699032 3.3:-63023313 MS.gene031869:CDS
GGTCCTTCCTACCAGAAACG+TGG 0.708088 3.3:-63021990 MS.gene031869:intron
GGAAACAGCAGTGGACATGG+TGG 0.727016 3.3:+63021762 None:intergenic
GGGTTTATAGGAGAATGAGG+AGG 0.748780 3.3:+63021813 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACAAGAAAAAAATAAAATA+AGG + chr3.3:63022274-63022293 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTGAGA+AGG - chr3.3:63022625-63022644 MS.gene031869:intron 10.0%
!! TTATAAATCTTAATATTGAC+CGG - chr3.3:63022463-63022482 MS.gene031869:intron 15.0%
!!! ATTTTGTGAATATCTAATTA+AGG - chr3.3:63020413-63020432 MS.gene031869:CDS 15.0%
!! AAAAAAGAATACCCTAATTT+AGG - chr3.3:63021921-63021940 MS.gene031869:CDS 20.0%
!! AATAAGTGAAGAAAAATATG+AGG - chr3.3:63022711-63022730 MS.gene031869:intron 20.0%
!! ACATGAATAATTGGAAAATT+CGG + chr3.3:63021067-63021086 None:intergenic 20.0%
!! ATAAGTGAAGAAAAATATGA+GGG - chr3.3:63022712-63022731 MS.gene031869:intron 20.0%
!! ATTGAAATGAATAGTAGAAA+AGG + chr3.3:63021582-63021601 None:intergenic 20.0%
!! ATTTATGAAAGGATGAAATT+TGG - chr3.3:63022658-63022677 MS.gene031869:intron 20.0%
!! CTATTAATATAAGCAATTGT+AGG - chr3.3:63022124-63022143 MS.gene031869:intron 20.0%
!! TAAGTATTAACATAAACACA+TGG + chr3.3:63022769-63022788 None:intergenic 20.0%
!! TAATAGTTGTTTAACCAAAT+AGG - chr3.3:63022500-63022519 MS.gene031869:intron 20.0%
!! TCTTAGTGTAGTAATATATA+AGG + chr3.3:63020914-63020933 None:intergenic 20.0%
!! TTCAAGTAAAATACACTTAA+AGG + chr3.3:63020459-63020478 None:intergenic 20.0%
!! TTGAAATGAATAGTAGAAAA+GGG + chr3.3:63021581-63021600 None:intergenic 20.0%
!! TTGAGAATATTCATATTTAC+TGG - chr3.3:63021829-63021848 MS.gene031869:CDS 20.0%
!!! ATTACTTTCACAATTTTGTT+TGG - chr3.3:63021328-63021347 MS.gene031869:intron 20.0%
!!! ATTTTAGACCATTTTATCTT+TGG - chr3.3:63021353-63021372 MS.gene031869:intron 20.0%
!!! ATTTTCCATTAATTCATTTC+TGG - chr3.3:63021731-63021750 MS.gene031869:intron 20.0%
!!! TAAGTAAAAAGTCACTTTTT+AGG + chr3.3:63022446-63022465 None:intergenic 20.0%
!!! TTATTTTGATCAATGATAAC+AGG + chr3.3:63022696-63022715 None:intergenic 20.0%
!!! TTTGCTTTAATTTGTTTGTT+AGG - chr3.3:63022799-63022818 MS.gene031869:intron 20.0%
!!! TTTTCCATTAATTCATTTCT+GGG - chr3.3:63021732-63021751 MS.gene031869:intron 20.0%
! AAAAATACATGCTAATACGT+TGG - chr3.3:63021127-63021146 MS.gene031869:intron 25.0%
! AAAGCAAATAGACCTAAATT+AGG + chr3.3:63021936-63021955 None:intergenic 25.0%
! AAGCAAATAGACCTAAATTA+GGG + chr3.3:63021935-63021954 None:intergenic 25.0%
! AAGCTCTTAACATGAATAAT+TGG + chr3.3:63021076-63021095 None:intergenic 25.0%
! ATATAAACTTAGGTCCTATT+TGG + chr3.3:63022517-63022536 None:intergenic 25.0%
! ATTCATATTTACTGGTAGAA+AGG - chr3.3:63021837-63021856 MS.gene031869:CDS 25.0%
! CTTCATACGAATCATAAAAA+GGG + chr3.3:63023168-63023187 None:intergenic 25.0%
! GTATTAGGATTAATAAATCC+CGG - chr3.3:63019730-63019749 MS.gene031869:CDS 25.0%
! TAGCATCATCATATAAACTT+AGG + chr3.3:63022527-63022546 None:intergenic 25.0%
! TTAAACAAAATCATTGTCCA+TGG - chr3.3:63022045-63022064 MS.gene031869:intron 25.0%
! TTATTACACTGAACTAAAGA+GGG - chr3.3:63023654-63023673 MS.gene031869:CDS 25.0%
! TTCATACGAATCATAAAAAG+GGG + chr3.3:63023167-63023186 None:intergenic 25.0%
! TTCTTTGTCAAATAGTTTAG+TGG + chr3.3:63021108-63021127 None:intergenic 25.0%
! TTGTGAATATCTAATTAAGG+AGG - chr3.3:63020416-63020435 MS.gene031869:CDS 25.0%
! TTTCCATTAATTCATTTCTG+GGG - chr3.3:63021733-63021752 MS.gene031869:intron 25.0%
!! ATTTTGCGAATATCTAGTTA+AGG - chr3.3:63023804-63023823 MS.gene031869:CDS 25.0%
!! TAACAGTAATTTCCTTTTCA+GGG + chr3.3:63023069-63023088 None:intergenic 25.0%
!!! ACTTTCTTTTTTCAAGTTAC+TGG - chr3.3:63020962-63020981 MS.gene031869:intron 25.0%
AAACAGAACTTCATTGTTCA+TGG - chr3.3:63022738-63022757 MS.gene031869:intron 30.0%
AAACATGGAGCTATTAATCT+TGG - chr3.3:63022884-63022903 MS.gene031869:CDS 30.0%
AAATCTTAATATTGACCGGA+GGG - chr3.3:63022467-63022486 MS.gene031869:intron 30.0%
AAATTCTGGACCATCAAAAT+TGG + chr3.3:63019530-63019549 None:intergenic 30.0%
AAGGAAATGAATGAGAAAAG+GGG - chr3.3:63021875-63021894 MS.gene031869:CDS 30.0%
AAGGAAATTACTGTTACATC+TGG - chr3.3:63019682-63019701 MS.gene031869:CDS 30.0%
AAGGGTAACGATTTATAAGA+AGG + chr3.3:63021563-63021582 None:intergenic 30.0%
AAGTCAGAAAGGAATCAAAT+TGG - chr3.3:63021478-63021497 MS.gene031869:intron 30.0%
AAGTTATCCTATAGAGCTTA+AGG + chr3.3:63022213-63022232 None:intergenic 30.0%
AATTACACGAATCAAACCTT+TGG + chr3.3:63020646-63020665 None:intergenic 30.0%
AATTCTGGACCATCAAAATT+GGG + chr3.3:63019529-63019548 None:intergenic 30.0%
ACAAATGCTAATATGTACCT+AGG - chr3.3:63021207-63021226 MS.gene031869:intron 30.0%
ACTAATTGTAGATCCTGATA+AGG - chr3.3:63019663-63019682 MS.gene031869:CDS 30.0%
AGAGGTTTAAGAAAGATACT+GGG - chr3.3:63023032-63023051 MS.gene031869:CDS 30.0%
AGGAGAAACTTAGAAAATGA+CGG - chr3.3:63023950-63023969 MS.gene031869:CDS 30.0%
AGTTCAATAACATGTTTCCT+AGG + chr3.3:63021227-63021246 None:intergenic 30.0%
AGTTCAGTGTAATAAGAATC+TGG + chr3.3:63023649-63023668 None:intergenic 30.0%
ATACAACAAAGTGATAAGAG+AGG + chr3.3:63020807-63020826 None:intergenic 30.0%
ATTAATAGCTCCATGTTTGA+TGG + chr3.3:63022882-63022901 None:intergenic 30.0%
ATTACACGAATCAAACCTTT+GGG + chr3.3:63020645-63020664 None:intergenic 30.0%
ATTTACTGGTAGAAAGGATT+TGG - chr3.3:63021843-63021862 MS.gene031869:CDS 30.0%
CATTGAATAACTGATGTATG+TGG + chr3.3:63022421-63022440 None:intergenic 30.0%
CATTGAATGATTGATGTATC+TGG - chr3.3:63022377-63022396 MS.gene031869:intron 30.0%
CTTATTACACTGAACTAAAG+AGG - chr3.3:63023653-63023672 MS.gene031869:CDS 30.0%
CTTATTTCCTTAAGCTCTAT+AGG - chr3.3:63022203-63022222 MS.gene031869:intron 30.0%
GAAGGAAATGAATGAGAAAA+GGG - chr3.3:63021874-63021893 MS.gene031869:CDS 30.0%
GAATATCTAATTAAGGAGGT+CGG - chr3.3:63020420-63020439 MS.gene031869:CDS 30.0%
GAATATGTGTTTGAGAATCA+TGG + chr3.3:63022088-63022107 None:intergenic 30.0%
GCACCATAAGAATCATAAAA+GGG + chr3.3:63019778-63019797 None:intergenic 30.0%
GCTAACATCAAATATACGTT+CGG - chr3.3:63021956-63021975 MS.gene031869:CDS 30.0%
GCTTCATACGAATCATAAAA+AGG + chr3.3:63023169-63023188 None:intergenic 30.0%
GTAACAGTAATTTCCTTATC+AGG + chr3.3:63019679-63019698 None:intergenic 30.0%
TAAATCTTAATATTGACCGG+AGG - chr3.3:63022466-63022485 MS.gene031869:intron 30.0%
TAGGTACATATTAGCATTTG+TGG + chr3.3:63021208-63021227 None:intergenic 30.0%
TATAAGAAGGAATGAATCTG+AGG + chr3.3:63021550-63021569 None:intergenic 30.0%
TGATGAAGTGTATCATAAGT+TGG - chr3.3:63020011-63020030 MS.gene031869:CDS 30.0%
TGATGAAGTGTATGATAAGT+TGG - chr3.3:63023402-63023421 MS.gene031869:CDS 30.0%
TTTACTGGTAGAAAGGATTT+GGG - chr3.3:63021844-63021863 MS.gene031869:CDS 30.0%
TTTCTTAAACCTCTCAGAAA+TGG + chr3.3:63023026-63023045 None:intergenic 30.0%
! AAGGAAATTACTGTTACTTC+TGG - chr3.3:63023073-63023092 MS.gene031869:CDS 30.0%
! ACATCATTTTCATGTCCAAA+AGG + chr3.3:63020390-63020409 None:intergenic 30.0%
! AGGAAATTACTGTTACTTCT+GGG - chr3.3:63023074-63023093 MS.gene031869:CDS 30.0%
! ATCATTTTCATGTCCAAAAG+GGG + chr3.3:63020388-63020407 None:intergenic 30.0%
! ATTTTACTTGAATCCAGAAG+AGG - chr3.3:63020467-63020486 MS.gene031869:CDS 30.0%
! CATCATTTTCATGTCCAAAA+GGG + chr3.3:63020389-63020408 None:intergenic 30.0%
! GTAACAGTAATTTCCTTTTC+AGG + chr3.3:63023070-63023089 None:intergenic 30.0%
! TGATAAGTTGGCATTTGATA+TGG - chr3.3:63023414-63023433 MS.gene031869:CDS 30.0%
! TTAGACCATTTTATCTTTGG+TGG - chr3.3:63021356-63021375 MS.gene031869:intron 30.0%
! TTCCATTAATTCATTTCTGG+GGG - chr3.3:63021734-63021753 MS.gene031869:intron 30.0%
! TTTTACTTGAATCCAGAAGA+GGG - chr3.3:63020468-63020487 MS.gene031869:CDS 30.0%
!! ATTTTGGCAAAGCTATAGTT+TGG - chr3.3:63022019-63022038 MS.gene031869:intron 30.0%
!!! ATGTCATTTTCATGTCCAAA+AGG + chr3.3:63023781-63023800 None:intergenic 30.0%
!!! CTATTTTGACATAGTAATGC+TGG + chr3.3:63020860-63020879 None:intergenic 30.0%
!!! TATTTTGGTTGAAGGATTGA+AGG - chr3.3:63020305-63020324 MS.gene031869:CDS 30.0%
!!! TGTCATTTTCATGTCCAAAA+GGG + chr3.3:63023780-63023799 None:intergenic 30.0%
AAACAGAATAACCTCATCAC+CGG + chr3.3:63019752-63019771 None:intergenic 35.0%
AACCCCCAGAAATGAATTAA+TGG + chr3.3:63021739-63021758 None:intergenic 35.0%
AAGCACAAAAAAGGTTCCAT+TGG + chr3.3:63020355-63020374 None:intergenic 35.0%
AAGCTCCACCAAAGATAAAA+TGG + chr3.3:63021364-63021383 None:intergenic 35.0%
AAGTCTGGACCATCAAAATT+TGG + chr3.3:63022920-63022939 None:intergenic 35.0%
AATGATTGATGTATCTGGTC+TGG - chr3.3:63022382-63022401 MS.gene031869:intron 35.0%
ACAAAAAAGGTTCCATTGGA+CGG + chr3.3:63020351-63020370 None:intergenic 35.0%
ACCAAGGATAATATATTGCC+TGG - chr3.3:63022586-63022605 MS.gene031869:intron 35.0%
ACCAGGCAATATATTATCCT+TGG + chr3.3:63022590-63022609 None:intergenic 35.0%
ATCAAAACATCGACATTCAG+GGG + chr3.3:63020683-63020702 None:intergenic 35.0%
ATCCAACAGAAACATGATCA+TGG + chr3.3:63021003-63021022 None:intergenic 35.0%
ATGGGAATAATCAGTATGCA+AGG - chr3.3:63019581-63019600 MS.gene031869:CDS 35.0%
ATTAATAAATCCCGGTGATG+AGG - chr3.3:63019738-63019757 MS.gene031869:CDS 35.0%
ATTTCAATTGCTTCTTTGCC+AGG - chr3.3:63023442-63023461 MS.gene031869:CDS 35.0%
CAAATATACGTTCGGATTGA+TGG - chr3.3:63021964-63021983 MS.gene031869:CDS 35.0%
CATCAAAACATCGACATTCA+GGG + chr3.3:63020684-63020703 None:intergenic 35.0%
CATCCTTGCAGAAAGTAAAT+CGG + chr3.3:63023897-63023916 None:intergenic 35.0%
GAATATCTAGTTAAGGAGGT+GGG - chr3.3:63023811-63023830 MS.gene031869:CDS 35.0%
GAGAGATTCAAGAAAGATAC+TGG - chr3.3:63019640-63019659 MS.gene031869:CDS 35.0%
GAGAGGTTTAAGAAAGATAC+TGG - chr3.3:63023031-63023050 MS.gene031869:CDS 35.0%
GGAAAATTCGGAGTTACAAT+GGG + chr3.3:63021055-63021074 None:intergenic 35.0%
GGAAGGAAATGAATGAGAAA+AGG - chr3.3:63021873-63021892 MS.gene031869:CDS 35.0%
GGCACCATAAGAATCATAAA+AGG + chr3.3:63019779-63019798 None:intergenic 35.0%
TAAATAGGATGAACCTGCAA+AGG + chr3.3:63021701-63021720 None:intergenic 35.0%
TAGAAAGGATTTGGGGAAAA+GGG - chr3.3:63021852-63021871 MS.gene031869:CDS 35.0%
TATATAAGGCCTTCTAATGC+AGG + chr3.3:63020900-63020919 None:intergenic 35.0%
TATTATGTTTCACTCTCCGT+CGG - chr3.3:63021411-63021430 MS.gene031869:intron 35.0%
TCATCCTTTCATAAATCCTC+TGG + chr3.3:63022654-63022673 None:intergenic 35.0%
TGAACTAAAGAGGGACTATA+TGG - chr3.3:63023663-63023682 MS.gene031869:CDS 35.0%
TGAGAAAAGGGGATAGATTT+AGG - chr3.3:63021886-63021905 MS.gene031869:CDS 35.0%
TGATGGTCCAGAATTTGTAA+AGG - chr3.3:63019534-63019553 MS.gene031869:CDS 35.0%
TGGAAAATTCGGAGTTACAA+TGG + chr3.3:63021056-63021075 None:intergenic 35.0%
TGGATTCAAGTAAAACACAC+TGG + chr3.3:63023854-63023873 None:intergenic 35.0%
TGGGAATAATCAGTATGCAA+GGG - chr3.3:63019582-63019601 MS.gene031869:CDS 35.0%
TTACACGAATCAAACCTTTG+GGG + chr3.3:63020644-63020663 None:intergenic 35.0%
TTACTATGTGGAGCTAAAGA+GGG - chr3.3:63020263-63020282 MS.gene031869:CDS 35.0%
TTACTGGTAGAAAGGATTTG+GGG - chr3.3:63021845-63021864 MS.gene031869:CDS 35.0%
TTCAAGTAAAACACACTGGT+AGG + chr3.3:63023850-63023869 None:intergenic 35.0%
TTGCATTGAGAATGATGTTC+TGG - chr3.3:63019981-63020000 MS.gene031869:CDS 35.0%
TTGCGAATATCTAGTTAAGG+AGG - chr3.3:63023807-63023826 MS.gene031869:CDS 35.0%
TTTACTTGAATCCAGAAGAG+GGG - chr3.3:63020469-63020488 MS.gene031869:CDS 35.0%
TTTACTTTCTGCAAGGATGA+AGG - chr3.3:63023898-63023917 MS.gene031869:CDS 35.0%
! CAGGGTTTTCCAAATTTTGA+TGG - chr3.3:63022908-63022927 MS.gene031869:CDS 35.0%
! GCTCCCTTTTATGATTCTTA+TGG - chr3.3:63019772-63019791 MS.gene031869:CDS 35.0%
! GTTTTACTTGAATCCAGAAG+AGG - chr3.3:63023858-63023877 MS.gene031869:CDS 35.0%
! TATCGCAAAGAGAGCTATTT+TGG - chr3.3:63020290-63020309 MS.gene031869:CDS 35.0%
! TATGGCAAAGAGAGCTATTT+TGG - chr3.3:63023681-63023700 MS.gene031869:CDS 35.0%
! TCATAAGTTGGCATTCGATA+TGG - chr3.3:63020023-63020042 MS.gene031869:CDS 35.0%
!! ACGAGTATTCTTTGAGATTG+AGG + chr3.3:63023275-63023294 None:intergenic 35.0%
!! ACGATGTGTCACTGTTATTT+TGG - chr3.3:63022003-63022022 MS.gene031869:intron 35.0%
!! ATTTCAATTGCTACTTTGCC+TGG - chr3.3:63020051-63020070 MS.gene031869:CDS 35.0%
!! GTCATTTTCATGTCCAAAAG+GGG + chr3.3:63023779-63023798 None:intergenic 35.0%
!! GTGAGGGGTATTTATAAGAA+TGG + chr3.3:63019908-63019927 None:intergenic 35.0%
!!! AAGAGAGCTATTTTGGTTGA+AGG - chr3.3:63020297-63020316 MS.gene031869:CDS 35.0%
!!! CTGAATGTCGATGTTTTGAT+GGG - chr3.3:63020683-63020702 MS.gene031869:intron 35.0%
AAACACGATAACCTCATCAC+CGG + chr3.3:63023143-63023162 None:intergenic 40.0%
AACAGAATAACCTCATCACC+GGG + chr3.3:63019751-63019770 None:intergenic 40.0%
AACCTCAAATCCTATGCAGT+GGG - chr3.3:63023600-63023619 MS.gene031869:CDS 40.0%
AAGCTGCAATTCAAGCTATC+AGG - chr3.3:63019557-63019576 MS.gene031869:CDS 40.0%
AATCAGTATGCTAGGGGTTA+TGG - chr3.3:63022980-63022999 MS.gene031869:CDS 40.0%
ACAAAGTAGGTTCCACTAGA+CGG + chr3.3:63023742-63023761 None:intergenic 40.0%
ACGGGAATAATCAGTATGCT+AGG - chr3.3:63022972-63022991 MS.gene031869:CDS 40.0%
ACGGTGACAATGAACTCATT+AGG - chr3.3:63020087-63020106 MS.gene031869:CDS 40.0%
AGCACCAGATTCTTACTATG+TGG - chr3.3:63020251-63020270 MS.gene031869:CDS 40.0%
AGCTCCACATAGTAAGAATC+TGG + chr3.3:63020258-63020277 None:intergenic 40.0%
AGCTGCAATTCAAGCTATCA+GGG - chr3.3:63019558-63019577 MS.gene031869:CDS 40.0%
AGGGAAGTCATTCTCCTTAA+CGG - chr3.3:63020107-63020126 MS.gene031869:CDS 40.0%
AGTATGCTTGCCATCAAACA+TGG - chr3.3:63022869-63022888 MS.gene031869:intron 40.0%
AGTCAGGTTTACTTTCTGCA+AGG - chr3.3:63020500-63020519 MS.gene031869:CDS 40.0%
ATACTCCATCCTGCATTAGA+AGG - chr3.3:63020888-63020907 MS.gene031869:intron 40.0%
ATATACGTTCGGATTGATGG+TGG - chr3.3:63021967-63021986 MS.gene031869:CDS 40.0%
ATATATTGCCTGGTAGAAGC+AGG - chr3.3:63022596-63022615 MS.gene031869:intron 40.0%
ATCTTTCCAGTAGGATTGTG+AGG + chr3.3:63023316-63023335 None:intergenic 40.0%
ATTGATAAATCCCGGTGATG+AGG - chr3.3:63023129-63023148 MS.gene031869:CDS 40.0%
CAAAAAAGGTTCCATTGGAC+GGG + chr3.3:63020350-63020369 None:intergenic 40.0%
CAAAGGAGTGATATTGTCAG+TGG + chr3.3:63021684-63021703 None:intergenic 40.0%
CAAGGACGAGGAAACTATTA+AGG - chr3.3:63020518-63020537 MS.gene031869:CDS 40.0%
CAAGGATGAAGGAACTCTTA+GGG - chr3.3:63023909-63023928 MS.gene031869:CDS 40.0%
CAATTCAAGCTATCAGGGAT+GGG - chr3.3:63019563-63019582 MS.gene031869:CDS 40.0%
CCATCAAAACATCGACATTC+AGG + chr3.3:63020685-63020704 None:intergenic 40.0%
CGAATATCTAGTTAAGGAGG+TGG - chr3.3:63023810-63023829 MS.gene031869:CDS 40.0%
CGGGAATAATCAGTATGCTA+GGG - chr3.3:63022973-63022992 MS.gene031869:CDS 40.0%
CGGTGACAATGAACTCATTA+GGG - chr3.3:63020088-63020107 MS.gene031869:CDS 40.0%
CTATTAAGGCTGCTGTTGAA+AGG - chr3.3:63020532-63020551 MS.gene031869:CDS 40.0%
CTTACTATGTGGAGCTAAAG+AGG - chr3.3:63020262-63020281 MS.gene031869:CDS 40.0%
CTTTCAAAACCGTCCTGATT+GGG - chr3.3:63022557-63022576 MS.gene031869:intron 40.0%
GAAGCCAGAGGATTTATGAA+AGG - chr3.3:63022647-63022666 MS.gene031869:intron 40.0%
GAGGACTTCAACTCTTCAAT+GGG + chr3.3:63023256-63023275 None:intergenic 40.0%
GAGTGAACATGTTTCCAGTA+GGG + chr3.3:63019933-63019952 None:intergenic 40.0%
GATGGCAAGCATACTCATTT+GGG + chr3.3:63022864-63022883 None:intergenic 40.0%
GCAATGACAATGTTGAGATC+TGG + chr3.3:63019619-63019638 None:intergenic 40.0%
GCAGCTTCCTTTACAAATTC+TGG + chr3.3:63019544-63019563 None:intergenic 40.0%
GGAGCTATAAACCTTAGTCA+GGG - chr3.3:63019499-63019518 MS.gene031869:CDS 40.0%
GGAGCTATTAATCTTGGTCA+GGG - chr3.3:63022890-63022909 MS.gene031869:CDS 40.0%
GGGAATAATCAGTATGCAAG+GGG - chr3.3:63019583-63019602 MS.gene031869:CDS 40.0%
GGGAATAATCAGTATGCTAG+GGG - chr3.3:63022974-63022993 MS.gene031869:CDS 40.0%
GTAGAAAGGATTTGGGGAAA+AGG - chr3.3:63021851-63021870 MS.gene031869:CDS 40.0%
GTGATCTACAACCACAAAGT+AGG + chr3.3:63023755-63023774 None:intergenic 40.0%
GTGATCTGCAAGCACAAAAA+AGG + chr3.3:63020364-63020383 None:intergenic 40.0%
GTGTTGGGATTGATAAATCC+CGG - chr3.3:63023121-63023140 MS.gene031869:CDS 40.0%
GTTTATAGCTCCATGTGTGA+TGG + chr3.3:63019491-63019510 None:intergenic 40.0%
TATTAAGTGCTTACTCCCTC+CGG + chr3.3:63022485-63022504 None:intergenic 40.0%
TCCTTGACTGGATGGAAAAT+CGG - chr3.3:63023511-63023530 MS.gene031869:CDS 40.0%
TCGACTTCAACTCATCAATC+GGG + chr3.3:63019864-63019883 None:intergenic 40.0%
TCTCAGAAATGGCAATGTTG+AGG + chr3.3:63023015-63023034 None:intergenic 40.0%
TCTTTCCAGTAGGATTGTGA+GGG + chr3.3:63023315-63023334 None:intergenic 40.0%
TGACAATATCACTCCTTTGC+AGG - chr3.3:63021685-63021704 MS.gene031869:intron 40.0%
TGAGGACTTCAACTCTTCAA+TGG + chr3.3:63023257-63023276 None:intergenic 40.0%
TGAGTGAACATCTTTCCAGT+AGG + chr3.3:63023325-63023344 None:intergenic 40.0%
TGAGTTTGACGAAATCACCA+TGG + chr3.3:63022065-63022084 None:intergenic 40.0%
TGATGGCAAGCATACTCATT+TGG + chr3.3:63022865-63022884 None:intergenic 40.0%
TGATGGTCCAGACTTTGTAA+AGG - chr3.3:63022925-63022944 MS.gene031869:CDS 40.0%
TGGAAAGATGTTCACTCAAG+AGG - chr3.3:63023327-63023346 MS.gene031869:CDS 40.0%
TGGAGCTATAAACCTTAGTC+AGG - chr3.3:63019498-63019517 MS.gene031869:CDS 40.0%
TGGAGCTATTAATCTTGGTC+AGG - chr3.3:63022889-63022908 MS.gene031869:CDS 40.0%
TTGAAGGATTGAAGGCTGTT+GGG - chr3.3:63020313-63020332 MS.gene031869:CDS 40.0%
TTTATCTTTGGTGGAGCTTG+AGG - chr3.3:63021365-63021384 MS.gene031869:intron 40.0%
TTTCAAAACCGTCCTGATTG+GGG - chr3.3:63022558-63022577 MS.gene031869:intron 40.0%
! AACCTTTGGGGATACTAGAA+AGG + chr3.3:63020632-63020651 None:intergenic 40.0%
! AATCAGTATGCAAGGGGTTT+TGG - chr3.3:63019589-63019608 MS.gene031869:CDS 40.0%
! GATTTGAGGTTGCAAAAGTC+AGG + chr3.3:63023591-63023610 None:intergenic 40.0%
! GTATGAAGCCACTTTATCCA+TGG - chr3.3:63023180-63023199 MS.gene031869:CDS 40.0%
! GTCCATGATCATGTTTCTGT+TGG - chr3.3:63020998-63021017 MS.gene031869:intron 40.0%
! GTCGACTTCAACTCATCAAT+CGG + chr3.3:63019865-63019884 None:intergenic 40.0%
! TATACGTTCGGATTGATGGT+GGG - chr3.3:63021968-63021987 MS.gene031869:CDS 40.0%
! TCAACATTGCCATTTCTGAG+AGG - chr3.3:63023014-63023033 MS.gene031869:CDS 40.0%
! TTCCTTTCTAGTATCCCCAA+AGG - chr3.3:63020627-63020646 MS.gene031869:intron 40.0%
! TTTTATATTCGCACCAGCCA+TGG + chr3.3:63019809-63019828 None:intergenic 40.0%
!! CCTGAATGTCGATGTTTTGA+TGG - chr3.3:63020682-63020701 MS.gene031869:intron 40.0%
!! TTATGGTGCCACTTTATCCA+TGG - chr3.3:63019789-63019808 MS.gene031869:CDS 40.0%
!!! ATGTTTTGATGGGTATGTGC+TGG - chr3.3:63020693-63020712 MS.gene031869:intron 40.0%
!!! TTTTTTGAGAAGGAAGCCAG+AGG - chr3.3:63022635-63022654 MS.gene031869:intron 40.0%
AAAAACCTCCTGCTTCTACC+AGG + chr3.3:63022607-63022626 None:intergenic 45.0%
AACACGATAACCTCATCACC+GGG + chr3.3:63023142-63023161 None:intergenic 45.0%
AAGAGGGGAAGAATCTAGTC+AGG - chr3.3:63020484-63020503 MS.gene031869:CDS 45.0%
AAGCAGCCATTCAAGCAATC+AGG - chr3.3:63022948-63022967 MS.gene031869:CDS 45.0%
AAGGATTTGGGGAAAAGGGA+AGG - chr3.3:63021856-63021875 MS.gene031869:CDS 45.0%
AATACCCCTCACAATCCTAC+TGG - chr3.3:63023307-63023326 MS.gene031869:CDS 45.0%
AATGGGAGATGGGAATTTGG+GGG + chr3.3:63021633-63021652 None:intergenic 45.0%
AATTGGGAAAGCCCTGACTA+AGG + chr3.3:63019513-63019532 None:intergenic 45.0%
ACCAGATTCTTTCCCTCTTC+TGG + chr3.3:63023874-63023893 None:intergenic 45.0%
ACTAGATTCTTCCCCTCTTC+TGG + chr3.3:63020483-63020502 None:intergenic 45.0%
AGACATTCTCCTTGACTGGA+TGG - chr3.3:63023503-63023522 MS.gene031869:CDS 45.0%
AGCAATGGGAGATGGGAATT+TGG + chr3.3:63021636-63021655 None:intergenic 45.0%
AGCAATTGCTGCAACTGTGT+TGG - chr3.3:63023105-63023124 MS.gene031869:CDS 45.0%
AGCACCTCCACACTTAACAT+GGG - chr3.3:63023543-63023562 MS.gene031869:CDS 45.0%
AGCAGCCATTCAAGCAATCA+GGG - chr3.3:63022949-63022968 MS.gene031869:CDS 45.0%
AGTATGCTTGCCATCACACA+TGG - chr3.3:63019478-63019497 MS.gene031869:CDS 45.0%
ATGGCTGGCGCAAAAGTAAA+AGG - chr3.3:63023199-63023218 MS.gene031869:CDS 45.0%
ATGTTTCCAGTAGGGTTGTG+AGG + chr3.3:63019925-63019944 None:intergenic 45.0%
ATTGAAGGCTGTTGGGTTCA+AGG - chr3.3:63020320-63020339 MS.gene031869:CDS 45.0%
ATTGTCAGTGGAAACAGCAG+TGG + chr3.3:63021672-63021691 None:intergenic 45.0%
ATTTCCCATCCTTTGCAGTG+TGG - chr3.3:63020210-63020229 MS.gene031869:CDS 45.0%
CAAAGTAGGTTCCACTAGAC+GGG + chr3.3:63023741-63023760 None:intergenic 45.0%
CAACCTCAAATCCTATGCAG+TGG - chr3.3:63023599-63023618 MS.gene031869:CDS 45.0%
CAATGGGAGATGGGAATTTG+GGG + chr3.3:63021634-63021653 None:intergenic 45.0%
CCTTTCAAAACCGTCCTGAT+TGG - chr3.3:63022556-63022575 MS.gene031869:intron 45.0%
CGAGTGAACATGTTTCCAGT+AGG + chr3.3:63019934-63019953 None:intergenic 45.0%
CTCAATGCAAAGAGAAGCGA+TGG + chr3.3:63023362-63023381 None:intergenic 45.0%
CTTTCCAGTAGGATTGTGAG+GGG + chr3.3:63023314-63023333 None:intergenic 45.0%
GAAATGGCAATGTTGAGGTC+TGG + chr3.3:63023010-63023029 None:intergenic 45.0%
GCAAGGATGAAGGAACTCTT+AGG - chr3.3:63023908-63023927 MS.gene031869:CDS 45.0%
GCAATCGCTGCAACTGTATT+AGG - chr3.3:63019715-63019734 MS.gene031869:CDS 45.0%
GCAATGGGAGATGGGAATTT+GGG + chr3.3:63021635-63021654 None:intergenic 45.0%
GCAATTCAAGCTATCAGGGA+TGG - chr3.3:63019562-63019581 MS.gene031869:CDS 45.0%
GCAATTGCTGCAACTGTGTT+GGG - chr3.3:63023106-63023125 MS.gene031869:CDS 45.0%
GCTGCTTCCTTTACAAAGTC+TGG + chr3.3:63022935-63022954 None:intergenic 45.0%
GGAAGTCATTCTCCTTAACG+GGG - chr3.3:63020109-63020128 MS.gene031869:CDS 45.0%
GGGAAGTCATTCTCCTTAAC+GGG - chr3.3:63020108-63020127 MS.gene031869:CDS 45.0%
GGGTTTATAGGAGAATGAGG+AGG + chr3.3:63021612-63021631 None:intergenic 45.0%
GGTCCGATTTACTTTCTGCA+AGG - chr3.3:63023891-63023910 MS.gene031869:CDS 45.0%
GTCTAGTGGAACCTACTTTG+TGG - chr3.3:63023741-63023760 MS.gene031869:CDS 45.0%
GTTGAAGGATTGAAGGCTGT+TGG - chr3.3:63020312-63020331 MS.gene031869:CDS 45.0%
GTTTACTTTCTGCAAGGACG+AGG - chr3.3:63020506-63020525 MS.gene031869:CDS 45.0%
TAAGGCCTTCTAATGCAGGA+TGG + chr3.3:63020896-63020915 None:intergenic 45.0%
TAGCACCTCCACACTTAACA+TGG - chr3.3:63023542-63023561 MS.gene031869:CDS 45.0%
TCAATGGGTAGAGCAAAGTC+TGG + chr3.3:63023241-63023260 None:intergenic 45.0%
TCCAGAAGAGGGAAAGAATC+TGG - chr3.3:63023870-63023889 MS.gene031869:CDS 45.0%
TCTAATTAAGGAGGTCGGTG+TGG - chr3.3:63020425-63020444 MS.gene031869:CDS 45.0%
TCTGACTTAATGCTTCGCGA+AGG + chr3.3:63021466-63021485 None:intergenic 45.0%
TGGAAACATGTTCACTCGAG+AGG - chr3.3:63019936-63019955 MS.gene031869:CDS 45.0%
TGGGAATTTGGGGGGTTTAT+AGG + chr3.3:63021624-63021643 None:intergenic 45.0%
TGTTTCCAGTAGGGTTGTGA+GGG + chr3.3:63019924-63019943 None:intergenic 45.0%
TTTCCCATCCTTTGCAGTGT+GGG - chr3.3:63020211-63020230 MS.gene031869:CDS 45.0%
! CAGGGCTTTCCCAATTTTGA+TGG - chr3.3:63019517-63019536 MS.gene031869:CDS 45.0%
! CGCGAAGCATTAAGTCAGAA+AGG - chr3.3:63021467-63021486 MS.gene031869:intron 45.0%
! GGCACGAGTATTCTTTGAGA+TGG + chr3.3:63019887-63019906 None:intergenic 45.0%
! GTTGTAGATCACACCCCTTT+TGG - chr3.3:63023763-63023782 MS.gene031869:CDS 45.0%
! TACTGTTACTTCTGGGTGCA+CGG - chr3.3:63023081-63023100 MS.gene031869:CDS 45.0%
! TTCAAGGTATTCCCGTCCAA+TGG - chr3.3:63020336-63020355 MS.gene031869:CDS 45.0%
! TTCAAGGTATTCCCGTCTAG+TGG - chr3.3:63023727-63023746 MS.gene031869:CDS 45.0%
!! ATTGAAGGCTGTTGGCTTCA+AGG - chr3.3:63023711-63023730 MS.gene031869:CDS 45.0%
!! TGTTAAGTGTGGAGGTGCTA+TGG + chr3.3:63023542-63023561 None:intergenic 45.0%
!! TTTTACTTTTGCGCCAGCCA+TGG + chr3.3:63023200-63023219 None:intergenic 45.0%
!!! CCAATCAGGACGGTTTTGAA+AGG + chr3.3:63022559-63022578 None:intergenic 45.0%
!! AAAATAAACAATTAATAAAT+AGG + chr3.3:63021716-63021735 None:intergenic 5.0%
AAACCGTCCTGATTGGGGTA+AGG - chr3.3:63022563-63022582 MS.gene031869:intron 50.0%
AATACCCCTCACAACCCTAC+TGG - chr3.3:63019916-63019935 MS.gene031869:CDS 50.0%
AATGCTTCGCGAAGGTCACA+CGG + chr3.3:63021458-63021477 None:intergenic 50.0%
AATTAAGGAGGTCGGTGTGG+CGG - chr3.3:63020428-63020447 MS.gene031869:CDS 50.0%
ACTCCCCACATTAAGTGTGG+AGG + chr3.3:63020159-63020178 None:intergenic 50.0%
ACTCCCCATGTTAAGTGTGG+AGG + chr3.3:63023550-63023569 None:intergenic 50.0%
AGCCCACTGCATAGGATTTG+AGG + chr3.3:63023605-63023624 None:intergenic 50.0%
AGCGCCTCCACACTTAATGT+GGG - chr3.3:63020152-63020171 MS.gene031869:CDS 50.0%
AGGAGAGAATGTGTGCAGCA+GGG + chr3.3:63021530-63021549 None:intergenic 50.0%
AGTCATTCTCCTTAACGGGG+TGG - chr3.3:63020112-63020131 MS.gene031869:CDS 50.0%
AGTGGAAACAGCAGTGGACA+TGG + chr3.3:63021666-63021685 None:intergenic 50.0%
AGTTAAGGAGGTGGGAGTAG+TGG - chr3.3:63023819-63023838 MS.gene031869:CDS 50.0%
ATGGGAGATGGGAATTTGGG+GGG + chr3.3:63021632-63021651 None:intergenic 50.0%
ATGGGTAGAGCAAAGTCTGG+AGG + chr3.3:63023238-63023257 None:intergenic 50.0%
ATTCTCCTTAACGGGGTGGA+AGG - chr3.3:63020116-63020135 MS.gene031869:CDS 50.0%
CCATTCAAGCAATCAGGGAC+GGG - chr3.3:63022954-63022973 MS.gene031869:CDS 50.0%
CTTTGCCTGGAATGTTCGAG+CGG - chr3.3:63020064-63020083 MS.gene031869:CDS 50.0%
GACTGGATGGAAAATCGGCT+GGG - chr3.3:63023516-63023535 MS.gene031869:CDS 50.0%
GCACCTCCACACTTAACATG+GGG - chr3.3:63023544-63023563 MS.gene031869:CDS 50.0%
GCCATTCAAGCAATCAGGGA+CGG - chr3.3:63022953-63022972 MS.gene031869:CDS 50.0%
GCTAGCTGTAGACCCTGAAA+AGG - chr3.3:63023054-63023073 MS.gene031869:CDS 50.0%
GGCTGCTGTTGAAAGGATGA+AGG - chr3.3:63020539-63020558 MS.gene031869:CDS 50.0%
GGCTGCTGTTGAGAGAATGA+AGG - chr3.3:63023930-63023949 MS.gene031869:CDS 50.0%
GGGAAGACATTCTCCTTGAC+TGG - chr3.3:63023499-63023518 MS.gene031869:CDS 50.0%
GGGGGGTTTATAGGAGAATG+AGG + chr3.3:63021615-63021634 None:intergenic 50.0%
GTTTCCAGTAGGGTTGTGAG+GGG + chr3.3:63019923-63019942 None:intergenic 50.0%
TAGCGCCTCCACACTTAATG+TGG - chr3.3:63020151-63020170 MS.gene031869:CDS 50.0%
TATTGCCTGGTAGAAGCAGG+AGG - chr3.3:63022599-63022618 MS.gene031869:intron 50.0%
TCAATCGGGACAGCGAAATC+TGG + chr3.3:63019850-63019869 None:intergenic 50.0%
TGACTGGATGGAAAATCGGC+TGG - chr3.3:63023515-63023534 MS.gene031869:CDS 50.0%
TGGGTAGAGCAAAGTCTGGA+GGG + chr3.3:63023237-63023256 None:intergenic 50.0%
TTCCCATCCTTTGCAGTGTG+GGG - chr3.3:63020212-63020231 MS.gene031869:CDS 50.0%
! CTTGCAGATCACACCCCTTT+TGG - chr3.3:63020372-63020391 MS.gene031869:CDS 50.0%
! GAAGCCACTTTATCCATGGC+TGG - chr3.3:63023184-63023203 MS.gene031869:CDS 50.0%
! TTTCTGGTAGGAAGGACCGA+CGG + chr3.3:63021430-63021449 None:intergenic 50.0%
!! CATTAAGTGTGGAGGCGCTA+TGG + chr3.3:63020151-63020170 None:intergenic 50.0%
!! GCCGATTTTCCATCCAGTCA+AGG + chr3.3:63023515-63023534 None:intergenic 50.0%
AACAGCAGTGGACATGGTGG+CGG + chr3.3:63021660-63021679 None:intergenic 55.0%
AACGGGGTGGAAGGTTGGAT+GGG - chr3.3:63020125-63020144 MS.gene031869:CDS 55.0%
AGCCCCACACTGCAAAGGAT+GGG + chr3.3:63020217-63020236 None:intergenic 55.0%
ATCGGGACAGCGAAATCTGG+AGG + chr3.3:63019847-63019866 None:intergenic 55.0%
CCCGTCCCTGATTGCTTGAA+TGG + chr3.3:63022957-63022976 None:intergenic 55.0%
CCTGATTGGGGTAAGGACCA+AGG - chr3.3:63022570-63022589 MS.gene031869:intron 55.0%
CCTTGGTCCTTACCCCAATC+AGG + chr3.3:63022573-63022592 None:intergenic 55.0%
CGCACCAGCCATGGATAAAG+TGG + chr3.3:63019800-63019819 None:intergenic 55.0%
CGCACTCCCCACATTAAGTG+TGG + chr3.3:63020162-63020181 None:intergenic 55.0%
CGCACTCCCCATGTTAAGTG+TGG + chr3.3:63023553-63023572 None:intergenic 55.0%
GAGGAGAGAATGTGTGCAGC+AGG + chr3.3:63021531-63021550 None:intergenic 55.0%
GCGCCTCCACACTTAATGTG+GGG - chr3.3:63020153-63020172 MS.gene031869:CDS 55.0%
GGAAACAGCAGTGGACATGG+TGG + chr3.3:63021663-63021682 None:intergenic 55.0%
GGAGAGAATGTGTGCAGCAG+GGG + chr3.3:63021529-63021548 None:intergenic 55.0%
GGTCCTTACCCCAATCAGGA+CGG + chr3.3:63022569-63022588 None:intergenic 55.0%
GGTCCTTCCTACCAGAAACG+TGG - chr3.3:63021432-63021451 MS.gene031869:intron 55.0%
TAACGGGGTGGAAGGTTGGA+TGG - chr3.3:63020124-63020143 MS.gene031869:CDS 55.0%
TCCAACCTTCCACCCCGTTA+AGG + chr3.3:63020124-63020143 None:intergenic 55.0%
TCCTTAACGGGGTGGAAGGT+TGG - chr3.3:63020120-63020139 MS.gene031869:CDS 55.0%
TCGGGACAGCGAAATCTGGA+GGG + chr3.3:63019846-63019865 None:intergenic 55.0%
TGCGCCAGCCATGGATAAAG+TGG + chr3.3:63023191-63023210 None:intergenic 55.0%
! CTTAACATGGGGAGTGCGAC+AGG - chr3.3:63023555-63023574 MS.gene031869:CDS 55.0%
! CTTAATGTGGGGAGTGCGAC+TGG - chr3.3:63020164-63020183 MS.gene031869:CDS 55.0%
!! GGTGCCACTTTATCCATGGC+TGG - chr3.3:63019793-63019812 MS.gene031869:CDS 55.0%
ACAGCAGCAGCCCACTGCAT+AGG + chr3.3:63023613-63023632 None:intergenic 60.0%
ACCGTCCGCTCGAACATTCC+AGG + chr3.3:63020072-63020091 None:intergenic 60.0%
AGGTCACACGGCCACGTTTC+TGG + chr3.3:63021446-63021465 None:intergenic 60.0%
CAGCCCCACACTGCAAAGGA+TGG + chr3.3:63020218-63020237 None:intergenic 60.0%
GCCTGGAATGTTCGAGCGGA+CGG - chr3.3:63020068-63020087 MS.gene031869:CDS 60.0%
TGGCGGCAGCAATGGGAGAT+GGG + chr3.3:63021643-63021662 None:intergenic 60.0%
! AGCAAAGTCTGGAGGGCGCA+GGG + chr3.3:63023230-63023249 None:intergenic 60.0%
!! CACACGGCCACGTTTCTGGT+AGG + chr3.3:63021442-63021461 None:intergenic 60.0%
!! CGGCCACGTTTCTGGTAGGA+AGG + chr3.3:63021438-63021457 None:intergenic 60.0%
!! GACATGGTGGCGGCAGCAAT+GGG + chr3.3:63021650-63021669 None:intergenic 60.0%
GCTGCAGCCCCACACTGCAA+AGG + chr3.3:63020222-63020241 None:intergenic 65.0%
GTGGCGGCAGCAATGGGAGA+TGG + chr3.3:63021644-63021663 None:intergenic 65.0%
! GAGCAAAGTCTGGAGGGCGC+AGG + chr3.3:63023231-63023250 None:intergenic 65.0%
!! GGACATGGTGGCGGCAGCAA+TGG + chr3.3:63021651-63021670 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 63019475 63023969 63019475 ID=MS.gene031869
chr3.3 mRNA 63019475 63023969 63019475 ID=MS.gene031869.t1;Parent=MS.gene031869
chr3.3 exon 63022874 63023969 63022874 ID=MS.gene031869.t1.exon1;Parent=MS.gene031869.t1
chr3.3 CDS 63022874 63023969 63022874 ID=cds.MS.gene031869.t1;Parent=MS.gene031869.t1
chr3.3 exon 63021738 63021997 63021738 ID=MS.gene031869.t1.exon2;Parent=MS.gene031869.t1
chr3.3 CDS 63021738 63021997 63021738 ID=cds.MS.gene031869.t1;Parent=MS.gene031869.t1
chr3.3 exon 63019475 63020623 63019475 ID=MS.gene031869.t1.exon3;Parent=MS.gene031869.t1
chr3.3 CDS 63019475 63020623 63019475 ID=cds.MS.gene031869.t1;Parent=MS.gene031869.t1
Gene Sequence

>MS.gene031869

ATGAGTATGCTTGCCATCACACATGGAGCTATAAACCTTAGTCAGGGCTTTCCCAATTTTGATGGTCCAGAATTTGTAAAGGAAGCTGCAATTCAAGCTATCAGGGATGGGAATAATCAGTATGCAAGGGGTTTTGGACTTCCAGATCTCAACATTGTCATTGCTGAGAGATTCAAGAAAGATACTGGACTAATTGTAGATCCTGATAAGGAAATTACTGTTACATCTGGTTGCACAGAAGCAATCGCTGCAACTGTATTAGGATTAATAAATCCCGGTGATGAGGTTATTCTGTTTGCTCCCTTTTATGATTCTTATGGTGCCACTTTATCCATGGCTGGTGCGAATATAAAAAGCATTACTCTGCGCCCTCCAGATTTCGCTGTCCCGATTGATGAGTTGAAGTCGACCATCTCAAAGAATACTCGTGCCATTCTTATAAATACCCCTCACAACCCTACTGGAAACATGTTCACTCGAGAGGAGCTCGATTCTGTTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTGTATCATAAGTTGGCATTCGATATGGAGCACATTTCAATTGCTACTTTGCCTGGAATGTTCGAGCGGACGGTGACAATGAACTCATTAGGGAAGTCATTCTCCTTAACGGGGTGGAAGGTTGGATGGGCCATAGCGCCTCCACACTTAATGTGGGGAGTGCGACTGGCACACACTTATATCAGTTTTTCAATTTCCCATCCTTTGCAGTGTGGGGCTGCAGCAGCACTTAGAGCACCAGATTCTTACTATGTGGAGCTAAAGAGGGACTATATCGCAAAGAGAGCTATTTTGGTTGAAGGATTGAAGGCTGTTGGGTTCAAGGTATTCCCGTCCAATGGAACCTTTTTTGTGCTTGCAGATCACACCCCTTTTGGACATGAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGGTCGGTGTGGCGGCAATACCTTTAAGTGTATTTTACTTGAATCCAGAAGAGGGGAAGAATCTAGTCAGGTTTACTTTCTGCAAGGACGAGGAAACTATTAAGGCTGCTGTTGAAAGGATGAAGGAGAAGCTTAGTAAATAATCTCTGTGCATGATCATGTCATGTGATACATATATAAATAAAGACATTTTCCTTTCTAGTATCCCCAAAGGTTTGATTCGTGTAATTTCTGCTATCTTCTTCCCCTGAATGTCGATGTTTTGATGGGTATGTGCTGGTTTATTCTGTAGTAACTATTAAGAGTACAGATTCAGTGTTGCATCAATAGTTTTAATTTCTTTACATTAGTTGTAGCATATATAGTCTCCTCTCTTATCACTTTGTTGTATTATACATTAATAATGTTGAGTGTGATTATTCCAGCATTACTATGTCAAAATAGAGTGAGATATACTCCATCCTGCATTAGAAGGCCTTATATATTACTACACTAAGAGCTAGATAGTCATGTTTTTCAGATTTGAACTTTCTTTTTTCAAGTTACTGGTTGTATGTCTACAGTCCATGATCATGTTTCTGTTGGATCTTATTTTTAATTATAATGTATTATTTTTCCCATTGTAACTCCGAATTTTCCAATTATTCATGTTAAGAGCTTAATTTATAGCCACTAAACTATTTGACAAAGAAAAAATACATGCTAATACGTTGGTATTTTCATTTGAATAATTCTATTTAAAACATCTCAAAAAACTTAATATTACGTACCACAAATGCTAATATGTACCTAGGAAACATGTTATTGAACTCAATTTTTTTTTTTTAGAAAAAATGTCTTTGTATATTTAATTTTTTAAAACTTAAAATATTATGTTTTCGAATGCAAAATTATTACTTTCACAATTTTGTTTGGTAATTTTAGACCATTTTATCTTTGGTGGAGCTTGAGGATTCAACTCAATAAGTTCATTCTTATTATGTTTCACTCTCCGTCGGTCCTTCCTACCAGAAACGTGGCCGTGTGACCTTCGCGAAGCATTAAGTCAGAAAGGAATCAAATTGGAATACTGTAGTATTAATATGCAGCTCCCCTGCTGCACACATTCTCTCCTCAGATTCATTCCTTCTTATAAATCGTTACCCTTTTCTACTATTCATTTCAATTTCAACACCTCCTCATTCTCCTATAAACCCCCCAAATTCCCATCTCCCATTGCTGCCGCCACCATGTCCACTGCTGTTTCCACTGACAATATCACTCCTTTGCAGGTTCATCCTATTTATTAATTGTTTATTTTCCATTAATTCATTTCTGGGGGTTCGTTCTTCTCATCGATCAAATTTTTCACTGCAATAATATTTTTGAGCTTTCATCAGTTTCTCTAATACACTTGAGAATATTCATATTTACTGGTAGAAAGGATTTGGGGAAAAGGGAAGGAAATGAATGAGAAAAGGGGATAGATTTAGGTTGTTTGAATGTAAAAAAGAATACCCTAATTTAGGTCTATTTGCTTTGCTAACATCAAATATACGTTCGGATTGATGGTGGGCATTACAGTTTCACGATGTGTCACTGTTATTTTGGCAAAGCTATAGTTTGGAGCTTAAACAAAATCATTGTCCATGGTGATTTCGTCAAACTCACCATGATTCTCAAACACATATTCACTTATTTAAGCTTATCTATTAATATAAGCAATTGTAGGACTGTTTGAGAGAACTTATGAAAATAGCTTATAACATGTTTATAAGTTGTTTTCAGCTTATTTCCTTAAGCTCTATAGGATAACTTACGAAAATAACTTATAGCTTATATATGAAAATAATTTGCCTTATTTTATTTTTTTCTTGTAGAAATAGCTTATGCATAAACTCTAATGTGATTAACACTTATACTATATGTTAGAATAATAAGCAAAAAATCATTTTTTAGATTCATTGAATGATTGATGTATCTGGTCTGGTCTATAAGATAGACCACATACATCAGTTATTCAATGAACCTAAAAAGTGACTTTTTACTTATAAATCTTAATATTGACCGGAGGGAGTAAGCACTTAATAGTTGTTTAACCAAATAGGACCTAAGTTTATATGATGATGCTAGCTTGTTTACCTTTCAAAACCGTCCTGATTGGGGTAAGGACCAAGGATAATATATTGCCTGGTAGAAGCAGGAGGTTTTTTTTTTTTTTTTTTTGAGAAGGAAGCCAGAGGATTTATGAAAGGATGAAATTTGGTTCTATTGCTTACCTGTTATCATTGATCAAAATAAGTGAAGAAAAATATGAGGGAAGAAACAGAACTTCATTGTTCATGGTTGAGCCATGTGTTTATGTTAATACTTAATAGTTTTTGTTTGCTTTAATTTGTTTGTTAGGTTGCAAAGCGATTAGAGAAGTTCAAAACAACAATTTTCACCCAAATGAGTATGCTTGCCATCAAACATGGAGCTATTAATCTTGGTCAGGGTTTTCCAAATTTTGATGGTCCAGACTTTGTAAAGGAAGCAGCCATTCAAGCAATCAGGGACGGGAATAATCAGTATGCTAGGGGTTATGGAGTTCCAGACCTCAACATTGCCATTTCTGAGAGGTTTAAGAAAGATACTGGGCTAGCTGTAGACCCTGAAAAGGAAATTACTGTTACTTCTGGGTGCACGGAAGCAATTGCTGCAACTGTGTTGGGATTGATAAATCCCGGTGATGAGGTTATCGTGTTTGCCCCTTTTTATGATTCGTATGAAGCCACTTTATCCATGGCTGGCGCAAAAGTAAAAGGCATCACCCTGCGCCCTCCAGACTTTGCTCTACCCATTGAAGAGTTGAAGTCCTCAATCTCAAAGAATACTCGTGCTATTCTTTTAAATACCCCTCACAATCCTACTGGAAAGATGTTCACTCAAGAGGAGCTCAATACCATCGCTTCTCTTTGCATTGAGAATGATGTTCTGGTTTTTTCTGATGAAGTGTATGATAAGTTGGCATTTGATATGGAACACATTTCAATTGCTTCTTTGCCAGGAATGTTCGAGCGGACGGTGACAATGAACTCATTAGGGAAGACATTCTCCTTGACTGGATGGAAAATCGGCTGGGCCATAGCACCTCCACACTTAACATGGGGAGTGCGACAGGCACATGCTTTCCTGACTTTTGCAACCTCAAATCCTATGCAGTGGGCTGCTGCTGTAGCTCTAAGAGCACCAGATTCTTATTACACTGAACTAAAGAGGGACTATATGGCAAAGAGAGCTATTTTGGTTGAAGGATTGAAGGCTGTTGGCTTCAAGGTATTCCCGTCTAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACATGAAAATGACATTGCATTTTGCGAATATCTAGTTAAGGAGGTGGGAGTAGTGGCAATTCCTACCAGTGTGTTTTACTTGAATCCAGAAGAGGGAAAGAATCTGGTCCGATTTACTTTCTGCAAGGATGAAGGAACTCTTAGGGCTGCTGTTGAGAGAATGAAGGAGAAACTTAGAAAATGA
Protein sequence

>MS.gene031869.t1

MSMLAITHGAINLSQGFPNFDGPEFVKEAAIQAIRDGNNQYARGFGLPDLNIVIAERFKKDTGLIVDPDKEITVTSGCTEAIAATVLGLINPGDEVILFAPFYDSYGATLSMAGANIKSITLRPPDFAVPIDELKSTISKNTRAILINTPHNPTGNMFTREELDSVASLCIENDVLVFTDEVYHKLAFDMEHISIATLPGMFERTVTMNSLGKSFSLTGWKVGWAIAPPHLMWGVRLAHTYISFSISHPLQCGAAAALRAPDSYYVELKRDYIAKRAILVEGLKAVGFKVFPSNGTFFVLADHTPFGHENDVAFCEYLIKEVGVAAIPLSVFYLNPEEGKNLVRFTFCKDEETIKAAVERMKEKLKTWPCDLREALSQKGIKLEYCSINMQLPCCTHSLLRFIPSYKSLPFSTIHFNFNTSSFSYKPPKFPSPIAAATMSTAVSTDNITPLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGNNQYARGYGVPDLNIAISERFKKDTGLAVDPEKEITVTSGCTEAIAATVLGLINPGDEVIVFAPFYDSYEATLSMAGAKVKGITLRPPDFALPIEELKSSISKNTRAILLNTPHNPTGKMFTQEELNTIASLCIENDVLVFSDEVYDKLAFDMEHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFATSNPMQWAAAVALRAPDSYYTELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGHENDIAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRAAVERMKEKLRK