Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007080.t1 | XP_013450261.1 | 93.8 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 3.00E-248 | 867.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007080.t1 | E9L7A5 | 76.1 | 465 | 103 | 3 | 14 | 474 | 13 | 473 | 3.3e-195 | 682.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007080.t1 | A0A072U3J0 | 93.8 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 2.1e-248 | 867.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007080 | MS.gene031869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007080.t1 | MTR_7g106830 | 93.750 | 480 | 23 | 1 | 1 | 480 | 1 | 473 | 0.0 | 920 |
| MS.gene007080.t1 | MTR_8g091280 | 84.440 | 482 | 66 | 3 | 1 | 480 | 1 | 475 | 0.0 | 821 |
| MS.gene007080.t1 | MTR_1807s0010 | 38.046 | 389 | 237 | 2 | 80 | 467 | 7 | 392 | 2.97e-82 | 260 |
| MS.gene007080.t1 | MTR_3g072670 | 30.513 | 390 | 247 | 10 | 88 | 471 | 72 | 443 | 2.81e-51 | 180 |
| MS.gene007080.t1 | MTR_3g072680 | 30.189 | 371 | 237 | 9 | 107 | 471 | 46 | 400 | 1.47e-49 | 174 |
| MS.gene007080.t1 | MTR_4g011820 | 29.944 | 354 | 219 | 9 | 135 | 480 | 62 | 394 | 1.91e-42 | 155 |
| MS.gene007080.t1 | MTR_1g087760 | 32.376 | 383 | 223 | 11 | 107 | 471 | 30 | 394 | 4.78e-42 | 154 |
| MS.gene007080.t1 | MTR_3g072690 | 29.290 | 338 | 183 | 9 | 107 | 442 | 11 | 294 | 5.95e-36 | 135 |
| MS.gene007080.t1 | MTR_8g061360 | 23.280 | 378 | 263 | 10 | 106 | 468 | 42 | 407 | 4.90e-21 | 95.5 |
| MS.gene007080.t1 | MTR_2g008430 | 24.923 | 325 | 206 | 11 | 106 | 405 | 72 | 383 | 8.58e-17 | 82.8 |
| MS.gene007080.t1 | MTR_8g098930 | 21.763 | 363 | 247 | 14 | 142 | 480 | 95 | 444 | 1.33e-16 | 82.4 |
| MS.gene007080.t1 | MTR_2g090615 | 22.888 | 367 | 258 | 10 | 114 | 468 | 57 | 410 | 2.85e-16 | 81.3 |
| MS.gene007080.t1 | MTR_4g092620 | 24.923 | 325 | 206 | 11 | 106 | 405 | 91 | 402 | 5.08e-14 | 74.3 |
| MS.gene007080.t1 | MTR_8g101820 | 21.392 | 388 | 267 | 15 | 102 | 471 | 46 | 413 | 1.36e-12 | 69.7 |
| MS.gene007080.t1 | MTR_6g463260 | 21.024 | 371 | 263 | 13 | 120 | 471 | 166 | 525 | 7.87e-12 | 67.8 |
| MS.gene007080.t1 | MTR_4g097540 | 18.873 | 355 | 256 | 9 | 146 | 475 | 91 | 438 | 8.78e-12 | 67.4 |
| MS.gene007080.t1 | MTR_7g079080 | 23.005 | 213 | 149 | 5 | 142 | 340 | 94 | 305 | 2.72e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007080.t1 | AT2G22250 | 73.349 | 424 | 110 | 2 | 53 | 474 | 47 | 469 | 0.0 | 641 |
| MS.gene007080.t1 | AT2G22250 | 73.349 | 424 | 110 | 2 | 53 | 474 | 47 | 469 | 0.0 | 641 |
| MS.gene007080.t1 | AT2G22250 | 75.871 | 402 | 97 | 0 | 73 | 474 | 21 | 422 | 0.0 | 640 |
| MS.gene007080.t1 | AT1G77670 | 29.612 | 412 | 263 | 11 | 66 | 471 | 46 | 436 | 3.54e-55 | 191 |
| MS.gene007080.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007080.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007080.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007080.t1 | AT1G80360 | 29.178 | 353 | 218 | 10 | 137 | 480 | 64 | 393 | 1.40e-38 | 145 |
| MS.gene007080.t1 | AT4G28420 | 23.404 | 376 | 265 | 9 | 105 | 467 | 61 | 426 | 6.53e-24 | 104 |
| MS.gene007080.t1 | AT5G36160 | 21.622 | 407 | 285 | 9 | 84 | 469 | 17 | 410 | 2.72e-21 | 96.3 |
| MS.gene007080.t1 | AT5G53970 | 21.636 | 379 | 278 | 6 | 101 | 468 | 30 | 400 | 1.00e-19 | 91.7 |
| MS.gene007080.t1 | AT2G20610 | 22.802 | 364 | 262 | 8 | 114 | 468 | 80 | 433 | 4.29e-19 | 90.1 |
| MS.gene007080.t1 | AT2G24850 | 23.055 | 347 | 236 | 11 | 137 | 468 | 87 | 417 | 6.39e-19 | 89.4 |
| MS.gene007080.t1 | AT4G28420 | 22.756 | 312 | 224 | 8 | 105 | 403 | 61 | 368 | 1.08e-18 | 88.2 |
| MS.gene007080.t1 | AT4G28410 | 22.164 | 379 | 246 | 12 | 114 | 468 | 82 | 435 | 1.55e-16 | 82.0 |
| MS.gene007080.t1 | AT1G01480 | 27.650 | 217 | 136 | 6 | 142 | 340 | 95 | 308 | 1.91e-16 | 82.0 |
| MS.gene007080.t1 | AT4G23600 | 21.270 | 315 | 210 | 10 | 172 | 468 | 4 | 298 | 3.68e-15 | 76.6 |
| MS.gene007080.t1 | AT2G13810 | 23.155 | 393 | 250 | 12 | 104 | 469 | 70 | 437 | 8.01e-15 | 77.0 |
| MS.gene007080.t1 | AT2G20610 | 22.647 | 340 | 238 | 9 | 114 | 441 | 80 | 406 | 1.34e-14 | 76.3 |
| MS.gene007080.t1 | AT5G51690 | 22.884 | 319 | 225 | 10 | 137 | 442 | 25 | 335 | 1.50e-14 | 75.5 |
| MS.gene007080.t1 | AT5G51690 | 22.884 | 319 | 225 | 10 | 137 | 442 | 148 | 458 | 2.66e-14 | 75.5 |
| MS.gene007080.t1 | AT4G28410 | 21.849 | 357 | 230 | 10 | 114 | 457 | 82 | 402 | 2.92e-14 | 75.1 |
| MS.gene007080.t1 | AT1G01480 | 26.904 | 197 | 125 | 5 | 160 | 340 | 9 | 202 | 4.59e-14 | 74.3 |
| MS.gene007080.t1 | AT4G23590 | 19.469 | 339 | 237 | 10 | 147 | 468 | 83 | 402 | 4.74e-14 | 74.3 |
| MS.gene007080.t1 | AT4G33680 | 24.308 | 325 | 208 | 11 | 106 | 405 | 93 | 404 | 5.60e-14 | 74.3 |
| MS.gene007080.t1 | AT1G62960 | 24.096 | 332 | 215 | 13 | 133 | 442 | 202 | 518 | 3.05e-13 | 72.4 |
| MS.gene007080.t1 | AT4G08040 | 21.212 | 330 | 231 | 11 | 157 | 468 | 102 | 420 | 5.07e-13 | 71.2 |
| MS.gene007080.t1 | AT4G26200 | 21.490 | 349 | 246 | 11 | 142 | 471 | 102 | 441 | 4.26e-12 | 68.6 |
Find 122 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCCATCCTTGCCATTTC+TGG | 0.086449 | 7.2:+59798267 | None:intergenic |
| TCTTGACCTTTCACTTATTA+TGG | 0.141566 | 7.2:+59798176 | None:intergenic |
| GCAATTTGTCATAAACTAAA+AGG | 0.247543 | 7.2:-59798606 | MS.gene007080:intron |
| TATTATGGATTCAAGAAGTT+TGG | 0.255108 | 7.2:+59798191 | None:intergenic |
| ATTGATTTCAGCTCCTATTA+TGG | 0.261186 | 7.2:-59797110 | MS.gene007080:CDS |
| TTGGGTGCTTTGCTACAATA+TGG | 0.279374 | 7.2:+59798082 | None:intergenic |
| TTCAGCTTCTCTTCCATAAT+AGG | 0.283252 | 7.2:+59797097 | None:intergenic |
| CAAGAAGTTTGGGATCTAAA+AGG | 0.290370 | 7.2:+59798202 | None:intergenic |
| TATTGAATTTAGTTTACTTC+GGG | 0.293177 | 7.2:-59797402 | MS.gene007080:intron |
| GGAAGAGAAGCTGAAGGTTT+TGG | 0.300530 | 7.2:-59797089 | MS.gene007080:CDS |
| TGGCGGCTTGGTTATATTGC+AGG | 0.312104 | 7.2:-59797672 | MS.gene007080:CDS |
| ATCTCTTCAAGTAATTTCTT+AGG | 0.314071 | 7.2:+59798108 | None:intergenic |
| ATGCTTGCAGTTTGCTCTCC+AGG | 0.323730 | 7.2:-59798421 | MS.gene007080:CDS |
| ATTCTAAAGTTCCCGCATTA+CGG | 0.328676 | 7.2:+59798637 | None:intergenic |
| AGCAAAGCACCCAAGGCTTT+TGG | 0.340366 | 7.2:-59798073 | MS.gene007080:intron |
| ATGCTGAAATAAAATGTTTC+GGG | 0.353525 | 7.2:+59797649 | None:intergenic |
| CTTGTGCCAGGGAGTGCATC+TGG | 0.364335 | 7.2:-59796899 | MS.gene007080:CDS |
| ATTATGGATTCAAGAAGTTT+GGG | 0.364458 | 7.2:+59798192 | None:intergenic |
| TGTCAATATCTGTTGCATAA+AGG | 0.366152 | 7.2:-59797041 | MS.gene007080:CDS |
| GCCTCTCTCCACGTCTCTTT+CGG | 0.381502 | 7.2:-59799910 | MS.gene007080:CDS |
| CATGCTGAAATAAAATGTTT+CGG | 0.387560 | 7.2:+59797648 | None:intergenic |
| TAGCCATCCTTGCCATTTCT+GGG | 0.389312 | 7.2:+59798268 | None:intergenic |
| TTCTAAAGTTCCCGCATTAC+GGG | 0.394245 | 7.2:+59798638 | None:intergenic |
| CAGACTTTGCGGGGAGAGAT+TGG | 0.395759 | 7.2:+59799932 | None:intergenic |
| CCAGCCGCCAAGAGAATAAC+AGG | 0.395883 | 7.2:+59799673 | None:intergenic |
| AGGCGTTCCTGTTATTCTCT+TGG | 0.401942 | 7.2:-59799680 | MS.gene007080:CDS |
| CTACAGGTCGCACTTGTGCC+AGG | 0.411505 | 7.2:-59796911 | MS.gene007080:intron |
| ACAAGTGCAGCTGAGGTAAG+AGG | 0.413408 | 7.2:+59796791 | None:intergenic |
| TGGAGAGAGGCAGACTTTGC+GGG | 0.421746 | 7.2:+59799922 | None:intergenic |
| CTGCAGCCCTTTGCAATGAC+TGG | 0.426334 | 7.2:-59797696 | MS.gene007080:intron |
| CTATGTTAGTTACCCAGAAA+TGG | 0.430251 | 7.2:-59798280 | MS.gene007080:CDS |
| AAAGCTGCAGTTGCTGCATC+AGG | 0.433618 | 7.2:-59797360 | MS.gene007080:CDS |
| TATAACTTTACCAAAAGCCT+TGG | 0.435701 | 7.2:+59798063 | None:intergenic |
| GCAATGACTGGTTGGCGGCT+TGG | 0.436164 | 7.2:-59797684 | MS.gene007080:CDS |
| CCTGTTATTCTCTTGGCGGC+TGG | 0.440530 | 7.2:-59799673 | MS.gene007080:CDS |
| TGCTTGCAGTTTGCTCTCCA+GGG | 0.440573 | 7.2:-59798420 | MS.gene007080:CDS |
| GCAAAGCTAGTGTGTGTTGC+TGG | 0.444438 | 7.2:+59797917 | None:intergenic |
| TCAATGCTGTGAAACCTTCA+AGG | 0.445837 | 7.2:-59799744 | MS.gene007080:CDS |
| TTATTGAATTTAGTTTACTT+CGG | 0.446135 | 7.2:-59797403 | MS.gene007080:intron |
| ATGTGGAAAGATTCAAAGTC+AGG | 0.449025 | 7.2:-59797628 | MS.gene007080:intron |
| GTGGAGAGAGGCAGACTTTG+CGG | 0.454753 | 7.2:+59799921 | None:intergenic |
| TAAATCATCATTATCAGAAA+CGG | 0.458616 | 7.2:+59799795 | None:intergenic |
| TTAGTTTATGACAAATTGCT+TGG | 0.459042 | 7.2:+59798610 | None:intergenic |
| AACCTTAGAAAATCCATTCA+CGG | 0.462409 | 7.2:+59797862 | None:intergenic |
| GTTATAGACACAGTCCTTGA+AGG | 0.462583 | 7.2:+59799730 | None:intergenic |
| ACAGCAGGTGTATCAAAATC+AGG | 0.465547 | 7.2:+59799646 | None:intergenic |
| GCAGTTGCTGCATCAGGACT+AGG | 0.466446 | 7.2:-59797354 | MS.gene007080:CDS |
| TGCCTGAGCAATACTCTGCT+TGG | 0.472297 | 7.2:+59798444 | None:intergenic |
| GATCAGATTATTGTTAGTAA+TGG | 0.476011 | 7.2:-59798469 | MS.gene007080:CDS |
| ACAGATCCTGTCGGGTTAGA+CGG | 0.476864 | 7.2:+59798135 | None:intergenic |
| TCTCTCTACAGCTGCCTGTA+GGG | 0.480917 | 7.2:+59796832 | None:intergenic |
| GATAAAACGCTAACCGTGAA+TGG | 0.483375 | 7.2:-59797875 | MS.gene007080:CDS |
| AGTTTGCTCTCCAGGGGATG+AGG | 0.487625 | 7.2:-59798413 | MS.gene007080:intron |
| TGGGTGCTTTGCTACAATAT+GGG | 0.487759 | 7.2:+59798083 | None:intergenic |
| GCATCAGGACTAGGCTATGC+TGG | 0.488598 | 7.2:-59797345 | MS.gene007080:CDS |
| AAGGATTCACACCTGTGGTT+CGG | 0.490759 | 7.2:+59797230 | None:intergenic |
| TCTGGGTAACTAACATAGAA+TGG | 0.491015 | 7.2:+59798285 | None:intergenic |
| ATTGACGTTGGAAGGATAAC+GGG | 0.491897 | 7.2:+59798237 | None:intergenic |
| CGTTCCTGTTATTCTCTTGG+CGG | 0.495894 | 7.2:-59799677 | MS.gene007080:CDS |
| TAGAGAACGAAGGAATTACT+TGG | 0.497722 | 7.2:-59797289 | MS.gene007080:CDS |
| CGCCAACCAGTCATTGCAAA+GGG | 0.498469 | 7.2:+59797690 | None:intergenic |
| CCTTTGCAATGACTGGTTGG+CGG | 0.506213 | 7.2:-59797689 | MS.gene007080:CDS |
| TCGTCTCCAGATGCACTCCC+TGG | 0.507721 | 7.2:+59796893 | None:intergenic |
| TAACTAACATAGAATGGAGC+TGG | 0.508014 | 7.2:+59798291 | None:intergenic |
| TATCAGATATTGACGTTGGA+AGG | 0.508504 | 7.2:+59798229 | None:intergenic |
| TAGGATAGACAGATCCTGTC+GGG | 0.509644 | 7.2:+59798127 | None:intergenic |
| ACTAGCTTTGCATCTTTACC+TGG | 0.509818 | 7.2:-59797905 | MS.gene007080:CDS |
| ATAACTTTACCAAAAGCCTT+GGG | 0.511183 | 7.2:+59798064 | None:intergenic |
| AGTACTGTAAAATATGTTGT+TGG | 0.516836 | 7.2:-59799862 | MS.gene007080:CDS |
| CCTTTACTCACCTCATCCCC+TGG | 0.518226 | 7.2:+59798403 | None:intergenic |
| TATTGACGTTGGAAGGATAA+CGG | 0.518343 | 7.2:+59798236 | None:intergenic |
| TGCATCTTTACCTGGAATGT+GGG | 0.520471 | 7.2:-59797897 | MS.gene007080:CDS |
| TTGCATCTTTACCTGGAATG+TGG | 0.521651 | 7.2:-59797898 | MS.gene007080:CDS |
| AGCATCTCTTCCTACCCTAC+AGG | 0.523160 | 7.2:-59796846 | MS.gene007080:CDS |
| GCCACCGCTCTTGTTCAAGC+AGG | 0.531444 | 7.2:-59799700 | MS.gene007080:CDS |
| AGCCCTTTGCAATGACTGGT+TGG | 0.531466 | 7.2:-59797692 | MS.gene007080:CDS |
| ACAAGGTACACCCGTAATGC+GGG | 0.533223 | 7.2:-59798648 | MS.gene007080:CDS |
| TACACCTGCTGTCATAGCTC+AGG | 0.536347 | 7.2:-59799635 | MS.gene007080:intron |
| AGCCAAGCAGAGTATTGCTC+AGG | 0.549115 | 7.2:-59798446 | MS.gene007080:CDS |
| TGTTCGCCGTCTAACCCGAC+AGG | 0.550345 | 7.2:-59798141 | MS.gene007080:CDS |
| CAAGTGCAGCTGAGGTAAGA+GGG | 0.556805 | 7.2:+59796792 | None:intergenic |
| AAATTATCAGATATTGACGT+TGG | 0.562680 | 7.2:+59798225 | None:intergenic |
| ATATCTGTTGCATAAAGGCC+AGG | 0.563043 | 7.2:-59797036 | MS.gene007080:intron |
| TACAGGTCGCACTTGTGCCA+GGG | 0.565282 | 7.2:-59796910 | MS.gene007080:intron |
| TTCTCTCTACAGCTGCCTGT+AGG | 0.565977 | 7.2:+59796831 | None:intergenic |
| GCTTGCAGTTTGCTCTCCAG+GGG | 0.566776 | 7.2:-59798419 | MS.gene007080:CDS |
| TTATATAACAACACCACATG+TGG | 0.567338 | 7.2:-59799970 | MS.gene007080:CDS |
| TTACCCAGAAATGGCAAGGA+TGG | 0.570545 | 7.2:-59798271 | MS.gene007080:CDS |
| TCTACAGCTGCCTGTAGGGT+AGG | 0.574697 | 7.2:+59796836 | None:intergenic |
| AGCTTTCTGAGATATACTAC+TGG | 0.576070 | 7.2:+59797377 | None:intergenic |
| ATTGAATTTAGTTTACTTCG+GGG | 0.577826 | 7.2:-59797401 | MS.gene007080:intron |
| GGTGTTGTTATATAACATGT+TGG | 0.577834 | 7.2:+59799978 | None:intergenic |
| TTGAATCCATAATAAGTGAA+AGG | 0.578044 | 7.2:-59798182 | MS.gene007080:CDS |
| GGGATTAATGCAATTCATGA+AGG | 0.585738 | 7.2:-59798675 | MS.gene007080:CDS |
| GGTTTCACAGCATTGACTCG+TGG | 0.588407 | 7.2:+59799751 | None:intergenic |
| CACAAGGTACACCCGTAATG+CGG | 0.593712 | 7.2:-59798649 | MS.gene007080:CDS |
| GGAGAGAGGCAGACTTTGCG+GGG | 0.594917 | 7.2:+59799923 | None:intergenic |
| GGAGTGGAGCAGAACAGAAG+AGG | 0.596530 | 7.2:-59799841 | MS.gene007080:CDS |
| CCGCCAACCAGTCATTGCAA+AGG | 0.598202 | 7.2:+59797689 | None:intergenic |
| TGTTGAAATATCCGAACCAC+AGG | 0.604423 | 7.2:-59797241 | MS.gene007080:intron |
| CAGACCTGAGCTATGACAGC+AGG | 0.609037 | 7.2:+59799631 | None:intergenic |
| GCCGAAAGAGACGTGGAGAG+AGG | 0.610172 | 7.2:+59799909 | None:intergenic |
| TATTATGGAAGAGAAGCTGA+AGG | 0.610603 | 7.2:-59797095 | MS.gene007080:CDS |
| TTGAATTTAGTTTACTTCGG+GGG | 0.612433 | 7.2:-59797400 | MS.gene007080:intron |
| TGTAAAATATGTTGTTGGAG+TGG | 0.614667 | 7.2:-59799857 | MS.gene007080:CDS |
| ACACTAGACAAGTGCAGCTG+AGG | 0.616702 | 7.2:+59796784 | None:intergenic |
| ATATTGTAGCAAAGCACCCA+AGG | 0.617688 | 7.2:-59798080 | MS.gene007080:CDS |
| TTAGGATAGACAGATCCTGT+CGG | 0.618575 | 7.2:+59798126 | None:intergenic |
| TTGCGGGGAGAGATTGGTGA+GGG | 0.619268 | 7.2:+59799938 | None:intergenic |
| ACTAGGCTATGCTGGTGGAG+AGG | 0.620996 | 7.2:-59797337 | MS.gene007080:CDS |
| GTTGTTATATAACATGTTGG+TGG | 0.621331 | 7.2:+59799981 | None:intergenic |
| TTAGTTACCCAGAAATGGCA+AGG | 0.624335 | 7.2:-59798275 | MS.gene007080:CDS |
| GGTTTGAGCCGAAAGAGACG+TGG | 0.630579 | 7.2:+59799902 | None:intergenic |
| TTCTCTAAATGCTTTCACCA+TGG | 0.638071 | 7.2:+59797305 | None:intergenic |
| TGGAGAGGTTGTTTCTACCA+TGG | 0.638313 | 7.2:-59797322 | MS.gene007080:CDS |
| GCCTGCTTGAACAAGAGCGG+TGG | 0.640534 | 7.2:+59799699 | None:intergenic |
| AGGGAAAGAGATTCCACATG+TGG | 0.649668 | 7.2:+59799957 | None:intergenic |
| TCAGGACTAGGCTATGCTGG+TGG | 0.663983 | 7.2:-59797342 | MS.gene007080:CDS |
| AACGCCTGCTTGAACAAGAG+CGG | 0.668953 | 7.2:+59799696 | None:intergenic |
| TTTGCGGGGAGAGATTGGTG+AGG | 0.672165 | 7.2:+59799937 | None:intergenic |
| TGAAAGCATTTAGAGAACGA+AGG | 0.676649 | 7.2:-59797299 | MS.gene007080:CDS |
| CAATTCATGAAGGACACACA+AGG | 0.683946 | 7.2:-59798665 | MS.gene007080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGATATTATATTATATG+CGG | - | chr7.2:59799326-59799345 | MS.gene007080:intron | 10.0% |
| !! | TATAAATTATGAAATAAACT+TGG | - | chr7.2:59799024-59799043 | MS.gene007080:intron | 10.0% |
| !! | AAATCAACATCTAATATTAT+CGG | + | chr7.2:59798225-59798244 | None:intergenic | 15.0% |
| !! | CAATTTACAAAAGAAAATAA+TGG | + | chr7.2:59797561-59797580 | None:intergenic | 15.0% |
| !!! | TTATTGAATTTAGTTTACTT+CGG | - | chr7.2:59799369-59799388 | MS.gene007080:intron | 15.0% |
| !! | AAAAAAAAATTAGAAGCCTT+AGG | + | chr7.2:59799055-59799074 | None:intergenic | 20.0% |
| !! | ACGAATATGGTTAAAATTAA+AGG | + | chr7.2:59799261-59799280 | None:intergenic | 20.0% |
| !! | ATGATGATATAAGTTATGTT+TGG | - | chr7.2:59797780-59797799 | MS.gene007080:intron | 20.0% |
| !! | CGAATATGGTTAAAATTAAA+GGG | + | chr7.2:59799260-59799279 | None:intergenic | 20.0% |
| !! | TAAATCATCATTATCAGAAA+CGG | + | chr7.2:59796980-59796999 | None:intergenic | 20.0% |
| !! | TATTTGTATCGAATACATAT+TGG | - | chr7.2:59797245-59797264 | MS.gene007080:CDS | 20.0% |
| !! | TCATAATTTATAACCATACT+AGG | + | chr7.2:59799016-59799035 | None:intergenic | 20.0% |
| !!! | TATTGAATTTAGTTTACTTC+GGG | - | chr7.2:59799370-59799389 | MS.gene007080:intron | 20.0% |
| !!! | TGTTTAGTTAAGTTGTTTAT+TGG | - | chr7.2:59798033-59798052 | MS.gene007080:intron | 20.0% |
| ! | AAATTATCAGATATTGACGT+TGG | + | chr7.2:59798550-59798569 | None:intergenic | 25.0% |
| ! | AGTACTGTAAAATATGTTGT+TGG | - | chr7.2:59796910-59796929 | MS.gene007080:intron | 25.0% |
| ! | ATAAGATGAAGCTTAGAATA+CGG | + | chr7.2:59799196-59799215 | None:intergenic | 25.0% |
| ! | ATACATATGTGAGAAATTAG+TGG | - | chr7.2:59797378-59797397 | MS.gene007080:CDS | 25.0% |
| ! | ATCTATGATACCAATATTTC+AGG | - | chr7.2:59798450-59798469 | MS.gene007080:CDS | 25.0% |
| ! | ATCTCTTCAAGTAATTTCTT+AGG | + | chr7.2:59798667-59798686 | None:intergenic | 25.0% |
| ! | ATGCTGAAATAAAATGTTTC+GGG | + | chr7.2:59799126-59799145 | None:intergenic | 25.0% |
| ! | ATTATGGATTCAAGAAGTTT+GGG | + | chr7.2:59798583-59798602 | None:intergenic | 25.0% |
| ! | CATGCTGAAATAAAATGTTT+CGG | + | chr7.2:59799127-59799146 | None:intergenic | 25.0% |
| ! | CCAGTAAATAAGTTCAAATA+AGG | + | chr7.2:59797810-59797829 | None:intergenic | 25.0% |
| ! | GATCAGATTATTGTTAGTAA+TGG | - | chr7.2:59798303-59798322 | MS.gene007080:CDS | 25.0% |
| ! | GCAATTTGTCATAAACTAAA+AGG | - | chr7.2:59798166-59798185 | MS.gene007080:CDS | 25.0% |
| ! | TAAAGTTATACTTCTCTGAT+GGG | - | chr7.2:59798722-59798741 | MS.gene007080:intron | 25.0% |
| ! | TATTATGGATTCAAGAAGTT+TGG | + | chr7.2:59798584-59798603 | None:intergenic | 25.0% |
| ! | TCACTCTTAAATAACGAATA+TGG | + | chr7.2:59799274-59799293 | None:intergenic | 25.0% |
| ! | TTAGTTTATGACAAATTGCT+TGG | + | chr7.2:59798165-59798184 | None:intergenic | 25.0% |
| ! | TTGAATCCATAATAAGTGAA+AGG | - | chr7.2:59798590-59798609 | MS.gene007080:intron | 25.0% |
| !! | AACATATTTTACAGTACTGT+GGG | + | chr7.2:59796908-59796927 | None:intergenic | 25.0% |
| !! | ATTGAATTTAGTTTACTTCG+GGG | - | chr7.2:59799371-59799390 | MS.gene007080:intron | 25.0% |
| !! | CCTTATTTGAACTTATTTAC+TGG | - | chr7.2:59797807-59797826 | MS.gene007080:intron | 25.0% |
| !! | GTTAGTTTGATTGTATTGTA+TGG | - | chr7.2:59798188-59798207 | MS.gene007080:CDS | 25.0% |
| !! | TCTGCAAAATCAATCAATTT+TGG | + | chr7.2:59798258-59798277 | None:intergenic | 25.0% |
| !! | TCTTATAGCTTGTATGAAAA+CGG | - | chr7.2:59797934-59797953 | MS.gene007080:CDS | 25.0% |
| !! | TTAAGTTGTTTATTGGAACA+TGG | - | chr7.2:59798040-59798059 | MS.gene007080:intron | 25.0% |
| !!! | AAAATTGATTGATTTTGCAG+AGG | - | chr7.2:59798257-59798276 | MS.gene007080:CDS | 25.0% |
| !!! | AAACATTTTATTTCAGCATG+TGG | - | chr7.2:59799127-59799146 | MS.gene007080:intron | 25.0% |
| !!! | ACAGCTTTTAAGATTTTAAG+TGG | + | chr7.2:59798787-59798806 | None:intergenic | 25.0% |
| !!! | CTTCAAAAAGTGTATTTTAC+TGG | - | chr7.2:59797314-59797333 | MS.gene007080:CDS | 25.0% |
| !!! | TTTTATGTCTGTTTAGCTTA+TGG | - | chr7.2:59797839-59797858 | MS.gene007080:intron | 25.0% |
| AACCTTAGAAAATCCATTCA+CGG | + | chr7.2:59798913-59798932 | None:intergenic | 30.0% | |
| AATAAACTTGGATGATCCTA+AGG | - | chr7.2:59799036-59799055 | MS.gene007080:intron | 30.0% | |
| ATAACTTTACCAAAAGCCTT+GGG | + | chr7.2:59798711-59798730 | None:intergenic | 30.0% | |
| ATTGAAAAAACCTACGAAGT+AGG | + | chr7.2:59797762-59797781 | None:intergenic | 30.0% | |
| CATAAGCTGAAAACAAATCA+AGG | + | chr7.2:59797878-59797897 | None:intergenic | 30.0% | |
| GAGTATGCAAATAAACTAGA+AGG | + | chr7.2:59799564-59799583 | None:intergenic | 30.0% | |
| GGAATAATGACCTGAAATAT+TGG | + | chr7.2:59798463-59798482 | None:intergenic | 30.0% | |
| GTAAAGTTATACTTCTCTGA+TGG | - | chr7.2:59798721-59798740 | MS.gene007080:intron | 30.0% | |
| GTTGTTATATAACATGTTGG+TGG | + | chr7.2:59796794-59796813 | None:intergenic | 30.0% | |
| TATAACTTTACCAAAAGCCT+TGG | + | chr7.2:59798712-59798731 | None:intergenic | 30.0% | |
| TATTGGATATCCATACTTTG+TGG | - | chr7.2:59797262-59797281 | MS.gene007080:CDS | 30.0% | |
| TCTTGACCTTTCACTTATTA+TGG | + | chr7.2:59798599-59798618 | None:intergenic | 30.0% | |
| TGCAATACGTTACATATACA+TGG | + | chr7.2:59797725-59797744 | None:intergenic | 30.0% | |
| TGTAAAATATGTTGTTGGAG+TGG | - | chr7.2:59796915-59796934 | MS.gene007080:intron | 30.0% | |
| TGTCAATATCTGTTGCATAA+AGG | - | chr7.2:59799731-59799750 | MS.gene007080:CDS | 30.0% | |
| TTATATAACAACACCACATG+TGG | - | chr7.2:59796802-59796821 | MS.gene007080:CDS | 30.0% | |
| TTATGTTGCATATCCTAGTA+TGG | - | chr7.2:59799000-59799019 | MS.gene007080:intron | 30.0% | |
| ! | ACATATTTTACAGTACTGTG+GGG | + | chr7.2:59796907-59796926 | None:intergenic | 30.0% |
| ! | ATTGATTTCAGCTCCTATTA+TGG | - | chr7.2:59799662-59799681 | MS.gene007080:CDS | 30.0% |
| ! | CAACATATTTTACAGTACTG+TGG | + | chr7.2:59796909-59796928 | None:intergenic | 30.0% |
| ! | TATACTTTCTATGGTAGTGT+AGG | - | chr7.2:59798072-59798091 | MS.gene007080:intron | 30.0% |
| ! | TTGAATTTAGTTTACTTCGG+GGG | - | chr7.2:59799372-59799391 | MS.gene007080:intron | 30.0% |
| !! | AAAAGTTTTAGCGAAATCGA+TGG | - | chr7.2:59799508-59799527 | MS.gene007080:intron | 30.0% |
| !! | ACTTTTTGAAGATACTTCCA+AGG | + | chr7.2:59797305-59797324 | None:intergenic | 30.0% |
| !! | GGTGTTGTTATATAACATGT+TGG | + | chr7.2:59796797-59796816 | None:intergenic | 30.0% |
| !!! | GTCTCCATTTTAGAGTATTT+GGG | + | chr7.2:59797224-59797243 | None:intergenic | 30.0% |
| ACGAAGTAGGATACATAGTA+CGG | + | chr7.2:59797749-59797768 | None:intergenic | 35.0% | |
| AGCGAACATAAAAGAGCAAA+AGG | + | chr7.2:59799586-59799605 | None:intergenic | 35.0% | |
| AGTGGAACTACATTCAAAGA+TGG | + | chr7.2:59798769-59798788 | None:intergenic | 35.0% | |
| ATGTGGAAAGATTCAAAGTC+AGG | - | chr7.2:59799144-59799163 | MS.gene007080:intron | 35.0% | |
| CAGAAAGAGAACATGACATA+TGG | + | chr7.2:59798939-59798958 | None:intergenic | 35.0% | |
| CATATGTCATGTTCTCTTTC+TGG | - | chr7.2:59798937-59798956 | MS.gene007080:intron | 35.0% | |
| CCAAAGGGTTATACTTTCTA+TGG | - | chr7.2:59798063-59798082 | MS.gene007080:intron | 35.0% | |
| CCATACTTTGTGGATACTTA+CGG | - | chr7.2:59797272-59797291 | MS.gene007080:CDS | 35.0% | |
| CTATGTTAGTTACCCAGAAA+TGG | - | chr7.2:59798492-59798511 | MS.gene007080:CDS | 35.0% | |
| GAAACTTCTGTGCATACATT+TGG | - | chr7.2:59799301-59799320 | MS.gene007080:intron | 35.0% | |
| GGGATTAATGCAATTCATGA+AGG | - | chr7.2:59798097-59798116 | MS.gene007080:CDS | 35.0% | |
| TAACATTGTGTTTCGTCTAC+AGG | - | chr7.2:59799845-59799864 | MS.gene007080:CDS | 35.0% | |
| TAACTAACATAGAATGGAGC+TGG | + | chr7.2:59798484-59798503 | None:intergenic | 35.0% | |
| TACTATGTATCCTACTTCGT+AGG | - | chr7.2:59797749-59797768 | MS.gene007080:intron | 35.0% | |
| TAGAGAACGAAGGAATTACT+TGG | - | chr7.2:59799483-59799502 | MS.gene007080:intron | 35.0% | |
| TATCAGATATTGACGTTGGA+AGG | + | chr7.2:59798546-59798565 | None:intergenic | 35.0% | |
| TATTATGGAAGAGAAGCTGA+AGG | - | chr7.2:59799677-59799696 | MS.gene007080:CDS | 35.0% | |
| TATTGACGTTGGAAGGATAA+CGG | + | chr7.2:59798539-59798558 | None:intergenic | 35.0% | |
| TCTGGGTAACTAACATAGAA+TGG | + | chr7.2:59798490-59798509 | None:intergenic | 35.0% | |
| TGTCATTATATGAGCATACC+TGG | + | chr7.2:59799757-59799776 | None:intergenic | 35.0% | |
| TTCAGCTTCTCTTCCATAAT+AGG | + | chr7.2:59799678-59799697 | None:intergenic | 35.0% | |
| TTCTCTAAATGCTTTCACCA+TGG | + | chr7.2:59799470-59799489 | None:intergenic | 35.0% | |
| TTTATTGGAACATGGCCAAA+GGG | - | chr7.2:59798048-59798067 | MS.gene007080:intron | 35.0% | |
| ! | ATACTTTATTTCCGCTTGCA+GGG | - | chr7.2:59799623-59799642 | MS.gene007080:intron | 35.0% |
| ! | CAAGAAGTTTGGGATCTAAA+AGG | + | chr7.2:59798573-59798592 | None:intergenic | 35.0% |
| ! | CAAGCCCAAATACTCTAAAA+TGG | - | chr7.2:59797217-59797236 | MS.gene007080:intron | 35.0% |
| ! | CATATTTTACAGTACTGTGG+GGG | + | chr7.2:59796906-59796925 | None:intergenic | 35.0% |
| ! | CCATAGAAAGTATAACCCTT+TGG | + | chr7.2:59798066-59798085 | None:intergenic | 35.0% |
| ! | TATACTTTATTTCCGCTTGC+AGG | - | chr7.2:59799622-59799641 | MS.gene007080:intron | 35.0% |
| !! | AACCGTGAATGGATTTTCTA+AGG | - | chr7.2:59798908-59798927 | MS.gene007080:intron | 35.0% |
| !! | AGCTTTCTGAGATATACTAC+TGG | + | chr7.2:59799398-59799417 | None:intergenic | 35.0% |
| !! | ATTCTAAAGTTCCCGCATTA+CGG | + | chr7.2:59798138-59798157 | None:intergenic | 35.0% |
| !! | ATTGATTTTGCAGAGGAGAA+TGG | - | chr7.2:59798264-59798283 | MS.gene007080:CDS | 35.0% |
| !! | TCTTAAAAGCTGTTTTGTGC+AGG | - | chr7.2:59798794-59798813 | MS.gene007080:intron | 35.0% |
| !! | TGAAAGCATTTAGAGAACGA+AGG | - | chr7.2:59799473-59799492 | MS.gene007080:intron | 35.0% |
| !! | TGAAGGTTTTGGCAAAATTG+AGG | - | chr7.2:59799694-59799713 | MS.gene007080:CDS | 35.0% |
| !!! | CATTTTAGAGTATTTGGGCT+TGG | + | chr7.2:59797219-59797238 | None:intergenic | 35.0% |
| !!! | CGTCTCCATTTTAGAGTATT+TGG | + | chr7.2:59797225-59797244 | None:intergenic | 35.0% |
| AATAAAATGCTCCCTGCAAG+CGG | + | chr7.2:59799637-59799656 | None:intergenic | 40.0% | |
| ACAGCAGGTGTATCAAAATC+AGG | + | chr7.2:59797129-59797148 | None:intergenic | 40.0% | |
| ATACTTACGGATATGCACCT+TGG | - | chr7.2:59797285-59797304 | MS.gene007080:CDS | 40.0% | |
| ATATCTGTTGCATAAAGGCC+AGG | - | chr7.2:59799736-59799755 | MS.gene007080:CDS | 40.0% | |
| ATTGACGTTGGAAGGATAAC+GGG | + | chr7.2:59798538-59798557 | None:intergenic | 40.0% | |
| CAATTCATGAAGGACACACA+AGG | - | chr7.2:59798107-59798126 | MS.gene007080:CDS | 40.0% | |
| CCGTAAGTATCCACAAAGTA+TGG | + | chr7.2:59797275-59797294 | None:intergenic | 40.0% | |
| CGAAGTAGGATACATAGTAC+GGG | + | chr7.2:59797748-59797767 | None:intergenic | 40.0% | |
| CTTGATTTCCTCTTGCTACA+AGG | - | chr7.2:59799216-59799235 | MS.gene007080:intron | 40.0% | |
| GATAAAACGCTAACCGTGAA+TGG | - | chr7.2:59798897-59798916 | MS.gene007080:intron | 40.0% | |
| GTTATAGACACAGTCCTTGA+AGG | + | chr7.2:59797045-59797064 | None:intergenic | 40.0% | |
| GTTTATTGGAACATGGCCAA+AGG | - | chr7.2:59798047-59798066 | MS.gene007080:intron | 40.0% | |
| TCAATGCTGTGAAACCTTCA+AGG | - | chr7.2:59797028-59797047 | MS.gene007080:intron | 40.0% | |
| TGCATCTTTACCTGGAATGT+GGG | - | chr7.2:59798875-59798894 | MS.gene007080:intron | 40.0% | |
| TGGGTGCTTTGCTACAATAT+GGG | + | chr7.2:59798692-59798711 | None:intergenic | 40.0% | |
| TGTTGAAATATCCGAACCAC+AGG | - | chr7.2:59799531-59799550 | MS.gene007080:intron | 40.0% | |
| TTAGGATAGACAGATCCTGT+CGG | + | chr7.2:59798649-59798668 | None:intergenic | 40.0% | |
| TTAGTTACCCAGAAATGGCA+AGG | - | chr7.2:59798497-59798516 | MS.gene007080:CDS | 40.0% | |
| TTGCATCTTTACCTGGAATG+TGG | - | chr7.2:59798874-59798893 | MS.gene007080:intron | 40.0% | |
| TTGGGTGCTTTGCTACAATA+TGG | + | chr7.2:59798693-59798712 | None:intergenic | 40.0% | |
| ! | ATATTGTAGCAAAGCACCCA+AGG | - | chr7.2:59798692-59798711 | MS.gene007080:intron | 40.0% |
| ! | TTAGAGTATTTGGGCTTGGT+AGG | + | chr7.2:59797215-59797234 | None:intergenic | 40.0% |
| ! | TTTCTATGGTAGTGTAGGCT+GGG | - | chr7.2:59798077-59798096 | MS.gene007080:CDS | 40.0% |
| !! | ACTAGCTTTGCATCTTTACC+TGG | - | chr7.2:59798867-59798886 | MS.gene007080:intron | 40.0% |
| !! | TTCTAAAGTTCCCGCATTAC+GGG | + | chr7.2:59798137-59798156 | None:intergenic | 40.0% |
| AAGCTATGCGCTAGAGCTTA+TGG | + | chr7.2:59797902-59797921 | None:intergenic | 45.0% | |
| AAGGATTCACACCTGTGGTT+CGG | + | chr7.2:59799545-59799564 | None:intergenic | 45.0% | |
| ACTAGAAGGATTCACACCTG+TGG | + | chr7.2:59799550-59799569 | None:intergenic | 45.0% | |
| ACTTCTCTGATGGGATCACA+AGG | - | chr7.2:59798731-59798750 | MS.gene007080:intron | 45.0% | |
| AGGCGTTCCTGTTATTCTCT+TGG | - | chr7.2:59797092-59797111 | MS.gene007080:CDS | 45.0% | |
| AGGGAAAGAGATTCCACATG+TGG | + | chr7.2:59796818-59796837 | None:intergenic | 45.0% | |
| CGTTCCTGTTATTCTCTTGG+CGG | - | chr7.2:59797095-59797114 | MS.gene007080:CDS | 45.0% | |
| CTTCTCTGATGGGATCACAA+GGG | - | chr7.2:59798732-59798751 | MS.gene007080:intron | 45.0% | |
| CTTGCTACAAGGCATGCAAA+AGG | - | chr7.2:59799227-59799246 | MS.gene007080:intron | 45.0% | |
| GAAATTAGTGGCGATGCACA+CGG | - | chr7.2:59797390-59797409 | MS.gene007080:CDS | 45.0% | |
| TAGGATAGACAGATCCTGTC+GGG | + | chr7.2:59798648-59798667 | None:intergenic | 45.0% | |
| TTACCCAGAAATGGCAAGGA+TGG | - | chr7.2:59798501-59798520 | MS.gene007080:intron | 45.0% | |
| TTTGCATGCCTTGTAGCAAG+AGG | + | chr7.2:59799227-59799246 | None:intergenic | 45.0% | |
| ! | AGCGTTTTATCCCACATTCC+AGG | + | chr7.2:59798888-59798907 | None:intergenic | 45.0% |
| ! | CTTTCTATGGTAGTGTAGGC+TGG | - | chr7.2:59798076-59798095 | MS.gene007080:CDS | 45.0% |
| ! | GGAAGAGAAGCTGAAGGTTT+TGG | - | chr7.2:59799683-59799702 | MS.gene007080:CDS | 45.0% |
| ! | TAGCCATCCTTGCCATTTCT+GGG | + | chr7.2:59798507-59798526 | None:intergenic | 45.0% |
| ! | TTAGCCATCCTTGCCATTTC+TGG | + | chr7.2:59798508-59798527 | None:intergenic | 45.0% |
| !! | TGGAGAGGTTGTTTCTACCA+TGG | - | chr7.2:59799450-59799469 | MS.gene007080:intron | 45.0% |
| AAAGCTGCAGTTGCTGCATC+AGG | - | chr7.2:59799412-59799431 | MS.gene007080:intron | 50.0% | |
| AACGCCTGCTTGAACAAGAG+CGG | + | chr7.2:59797079-59797098 | None:intergenic | 50.0% | |
| ACAAGGTACACCCGTAATGC+GGG | - | chr7.2:59798124-59798143 | MS.gene007080:CDS | 50.0% | |
| ACAAGTGCAGCTGAGGTAAG+AGG | + | chr7.2:59799984-59800003 | None:intergenic | 50.0% | |
| AGCATCTCTTCCTACCCTAC+AGG | - | chr7.2:59799926-59799945 | MS.gene007080:CDS | 50.0% | |
| AGCCCTTTGCAATGACTGGT+TGG | - | chr7.2:59799080-59799099 | MS.gene007080:intron | 50.0% | |
| AGGGGATGAGGTGAGTAAAG+GGG | - | chr7.2:59798371-59798390 | MS.gene007080:intron | 50.0% | |
| CAAGTGCAGCTGAGGTAAGA+GGG | + | chr7.2:59799983-59800002 | None:intergenic | 50.0% | |
| CACAAGGTACACCCGTAATG+CGG | - | chr7.2:59798123-59798142 | MS.gene007080:CDS | 50.0% | |
| CAGGGGATGAGGTGAGTAAA+GGG | - | chr7.2:59798370-59798389 | MS.gene007080:intron | 50.0% | |
| CGCCAACCAGTCATTGCAAA+GGG | + | chr7.2:59799085-59799104 | None:intergenic | 50.0% | |
| GCAAAGCTAGTGTGTGTTGC+TGG | + | chr7.2:59798858-59798877 | None:intergenic | 50.0% | |
| TACACCTGCTGTCATAGCTC+AGG | - | chr7.2:59797137-59797156 | MS.gene007080:intron | 50.0% | |
| TCTCTCTACAGCTGCCTGTA+GGG | + | chr7.2:59799943-59799962 | None:intergenic | 50.0% | |
| TGCCTGAGCAATACTCTGCT+TGG | + | chr7.2:59798331-59798350 | None:intergenic | 50.0% | |
| TTCTCTCTACAGCTGCCTGT+AGG | + | chr7.2:59799944-59799963 | None:intergenic | 50.0% | |
| ! | ACAGATCCTGTCGGGTTAGA+CGG | + | chr7.2:59798640-59798659 | None:intergenic | 50.0% |
| ! | ATGCTTGCAGTTTGCTCTCC+AGG | - | chr7.2:59798351-59798370 | MS.gene007080:intron | 50.0% |
| ! | CCTTTGCAATGACTGGTTGG+CGG | - | chr7.2:59799083-59799102 | MS.gene007080:intron | 50.0% |
| ! | TGCTTGCAGTTTGCTCTCCA+GGG | - | chr7.2:59798352-59798371 | MS.gene007080:intron | 50.0% |
| !! | AGCAAAGCACCCAAGGCTTT+TGG | - | chr7.2:59798699-59798718 | MS.gene007080:intron | 50.0% |
| !! | AGCCAAGCAGAGTATTGCTC+AGG | - | chr7.2:59798326-59798345 | MS.gene007080:intron | 50.0% |
| !! | GGTTTCACAGCATTGACTCG+TGG | + | chr7.2:59797024-59797043 | None:intergenic | 50.0% |
| !! | TGGCGGCTTGGTTATATTGC+AGG | - | chr7.2:59799100-59799119 | MS.gene007080:intron | 50.0% |
| ACTAGGCTATGCTGGTGGAG+AGG | - | chr7.2:59799435-59799454 | MS.gene007080:intron | 55.0% | |
| CAGACCTGAGCTATGACAGC+AGG | + | chr7.2:59797144-59797163 | None:intergenic | 55.0% | |
| CAGACTTTGCGGGGAGAGAT+TGG | + | chr7.2:59796843-59796862 | None:intergenic | 55.0% | |
| CCAGCCGCCAAGAGAATAAC+AGG | + | chr7.2:59797102-59797121 | None:intergenic | 55.0% | |
| CCAGGGGATGAGGTGAGTAA+AGG | - | chr7.2:59798369-59798388 | MS.gene007080:intron | 55.0% | |
| CCGCCAACCAGTCATTGCAA+AGG | + | chr7.2:59799086-59799105 | None:intergenic | 55.0% | |
| CCTGTTATTCTCTTGGCGGC+TGG | - | chr7.2:59797099-59797118 | MS.gene007080:CDS | 55.0% | |
| CCTTTACTCACCTCATCCCC+TGG | + | chr7.2:59798372-59798391 | None:intergenic | 55.0% | |
| CTGCAGCCCTTTGCAATGAC+TGG | - | chr7.2:59799076-59799095 | MS.gene007080:intron | 55.0% | |
| GCAGTTGCTGCATCAGGACT+AGG | - | chr7.2:59799418-59799437 | MS.gene007080:intron | 55.0% | |
| GCATCAGGACTAGGCTATGC+TGG | - | chr7.2:59799427-59799446 | MS.gene007080:intron | 55.0% | |
| GCCTCTCTCCACGTCTCTTT+CGG | - | chr7.2:59796862-59796881 | MS.gene007080:CDS | 55.0% | |
| GGAGTGGAGCAGAACAGAAG+AGG | - | chr7.2:59796931-59796950 | MS.gene007080:intron | 55.0% | |
| GGTTTGAGCCGAAAGAGACG+TGG | + | chr7.2:59796873-59796892 | None:intergenic | 55.0% | |
| GTGGAGAGAGGCAGACTTTG+CGG | + | chr7.2:59796854-59796873 | None:intergenic | 55.0% | |
| TACAGGTCGCACTTGTGCCA+GGG | - | chr7.2:59799862-59799881 | MS.gene007080:CDS | 55.0% | |
| TACAGTACTGTGGGGGAACG+TGG | + | chr7.2:59796899-59796918 | None:intergenic | 55.0% | |
| TACTGTGGGGGAACGTGGAA+AGG | + | chr7.2:59796894-59796913 | None:intergenic | 55.0% | |
| TCAGGACTAGGCTATGCTGG+TGG | - | chr7.2:59799430-59799449 | MS.gene007080:intron | 55.0% | |
| TCTACAGCTGCCTGTAGGGT+AGG | + | chr7.2:59799939-59799958 | None:intergenic | 55.0% | |
| TGGAGAGAGGCAGACTTTGC+GGG | + | chr7.2:59796853-59796872 | None:intergenic | 55.0% | |
| TTGCGGGGAGAGATTGGTGA+GGG | + | chr7.2:59796837-59796856 | None:intergenic | 55.0% | |
| TTTGCGGGGAGAGATTGGTG+AGG | + | chr7.2:59796838-59796857 | None:intergenic | 55.0% | |
| ! | AGTTTGCTCTCCAGGGGATG+AGG | - | chr7.2:59798359-59798378 | MS.gene007080:intron | 55.0% |
| ! | GCTTGCAGTTTGCTCTCCAG+GGG | - | chr7.2:59798353-59798372 | MS.gene007080:intron | 55.0% |
| CTACAGGTCGCACTTGTGCC+AGG | - | chr7.2:59799861-59799880 | MS.gene007080:CDS | 60.0% | |
| GCCACCGCTCTTGTTCAAGC+AGG | - | chr7.2:59797072-59797091 | MS.gene007080:CDS | 60.0% | |
| GCCGAAAGAGACGTGGAGAG+AGG | + | chr7.2:59796866-59796885 | None:intergenic | 60.0% | |
| GCCTGCTTGAACAAGAGCGG+TGG | + | chr7.2:59797076-59797095 | None:intergenic | 60.0% | |
| GGAGAGAGGCAGACTTTGCG+GGG | + | chr7.2:59796852-59796871 | None:intergenic | 60.0% | |
| TCGTCTCCAGATGCACTCCC+TGG | + | chr7.2:59799882-59799901 | None:intergenic | 60.0% | |
| TGTTCGCCGTCTAACCCGAC+AGG | - | chr7.2:59798631-59798650 | MS.gene007080:CDS | 60.0% | |
| ! | CTTGTGCCAGGGAGTGCATC+TGG | - | chr7.2:59799873-59799892 | MS.gene007080:CDS | 60.0% |
| ! | GCAATGACTGGTTGGCGGCT+TGG | - | chr7.2:59799088-59799107 | MS.gene007080:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 59796787 | 59800007 | 59796787 | ID=MS.gene007080 |
| chr7.2 | mRNA | 59796787 | 59800007 | 59796787 | ID=MS.gene007080.t1;Parent=MS.gene007080 |
| chr7.2 | exon | 59799636 | 59800007 | 59799636 | ID=MS.gene007080.t1.exon1;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59799636 | 59800007 | 59799636 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59798607 | 59798700 | 59798607 | ID=MS.gene007080.t1.exon2;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59798607 | 59798700 | 59798607 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59798414 | 59798517 | 59798414 | ID=MS.gene007080.t1.exon3;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59798414 | 59798517 | 59798414 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59798074 | 59798322 | 59798074 | ID=MS.gene007080.t1.exon4;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59798074 | 59798322 | 59798074 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59797865 | 59797978 | 59797865 | ID=MS.gene007080.t1.exon5;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59797865 | 59797978 | 59797865 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59797629 | 59797712 | 59797629 | ID=MS.gene007080.t1.exon6;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59797629 | 59797712 | 59797629 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59797242 | 59797412 | 59797242 | ID=MS.gene007080.t1.exon7;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59797242 | 59797412 | 59797242 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59797037 | 59797150 | 59797037 | ID=MS.gene007080.t1.exon8;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59797037 | 59797150 | 59797037 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| chr7.2 | exon | 59796787 | 59796927 | 59796787 | ID=MS.gene007080.t1.exon9;Parent=MS.gene007080.t1 |
| chr7.2 | CDS | 59796787 | 59796927 | 59796787 | ID=cds.MS.gene007080.t1;Parent=MS.gene007080.t1 |
| Gene Sequence |
| Protein sequence |