Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00718.t1 | XP_019425985.1 | 55.3 | 342 | 98 | 5 | 3 | 289 | 6 | 347 | 1.60E-81 | 313.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00718.t1 | Q9SU25 | 55.2 | 203 | 59 | 3 | 3 | 175 | 5 | 205 | 5.6e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00718.t1 | A0A4P1QQ39 | 55.3 | 342 | 98 | 5 | 3 | 289 | 6 | 347 | 1.2e-81 | 313.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene00718 | MS.gene064717 | PPI |
| MS.gene014464 | MS.gene00718 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00718.t1 | MTR_2g025620 | 75.959 | 391 | 42 | 6 | 1 | 339 | 1 | 391 | 7.90e-175 | 496 |
| MS.gene00718.t1 | MTR_2g025590 | 70.677 | 399 | 55 | 7 | 1 | 339 | 1 | 397 | 1.67e-167 | 478 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00718.t1 | AT4G12610 | 54.040 | 396 | 120 | 8 | 3 | 338 | 5 | 398 | 8.08e-115 | 344 |
| MS.gene00718.t1 | AT4G12610 | 54.040 | 396 | 120 | 8 | 3 | 338 | 5 | 398 | 2.95e-114 | 346 |
Find 0 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAAAGATTACTTTAT+CGG | + | 14604:13692-13711 | MS.gene00718:CDS | 15.0% |
| !! | CATAAAATATAAAACAAACA+AGG | - | 14604:14824-14843 | MS.gene00718:intergenic | 15.0% |
| !! | TTTATGGAAATATGTATATT+TGG | + | 14604:15586-15605 | MS.gene00718:intron | 15.0% |
| !! | AAACTAACCAAAAGTAAAAT+TGG | - | 14604:14865-14884 | MS.gene00718:intergenic | 20.0% |
| !! | AAGATAAAGATTACTTTATC+GGG | + | 14604:13693-13712 | MS.gene00718:CDS | 20.0% |
| !! | ATAAAATTGAAACTAATCAG+CGG | - | 14604:16306-16325 | MS.gene00718:intergenic | 20.0% |
| !! | ATATATTAGGTAATTAGGTA+TGG | + | 14604:15558-15577 | MS.gene00718:intron | 20.0% |
| !! | ATTAAAAGAGTAACTTAACA+AGG | - | 14604:15915-15934 | MS.gene00718:intergenic | 20.0% |
| !! | ATTAGGTATGGATTTATTTA+TGG | + | 14604:15570-15589 | MS.gene00718:intron | 20.0% |
| !! | ATTATATTTAGAAGAACCTA+TGG | + | 14604:13875-13894 | MS.gene00718:intron | 20.0% |
| !! | GAAATTGAAAAATTCAATGA+AGG | - | 14604:13592-13611 | MS.gene00718:intergenic | 20.0% |
| !! | TACATTATAAATCTGCTAAT+AGG | + | 14604:14913-14932 | MS.gene00718:intron | 20.0% |
| !! | TAGCAGATTTATAATGTATA+TGG | - | 14604:14911-14930 | MS.gene00718:intergenic | 20.0% |
| !! | TCCAAAAGATATAAATATCA+AGG | - | 14604:15810-15829 | MS.gene00718:intergenic | 20.0% |
| !! | TCTACAATTGGTTATATATT+AGG | + | 14604:15545-15564 | MS.gene00718:intron | 20.0% |
| !! | TGGTTATATATTAGGTAATT+AGG | + | 14604:15553-15572 | MS.gene00718:intron | 20.0% |
| !!! | CATTTTTAAATACTTGCATA+TGG | + | 14604:16329-16348 | MS.gene00718:intron | 20.0% |
| !!! | CTGATTAGTTTCAATTTTAT+TGG | + | 14604:16306-16325 | MS.gene00718:intron | 20.0% |
| !!! | TCAATTTCTTTTTTCTGTTA+AGG | + | 14604:13604-13623 | MS.gene00718:intron | 20.0% |
| !!! | TCCTTGATATTTATATCTTT+TGG | + | 14604:15806-15825 | MS.gene00718:intron | 20.0% |
| ! | AAGTATAAGAATTTGAGGAT+TGG | - | 14604:15476-15495 | MS.gene00718:intergenic | 25.0% |
| ! | ATATAAGCAATTAACTTTGG+AGG | + | 14604:14480-14499 | MS.gene00718:intron | 25.0% |
| ! | ATTAAGTAAAAGGAAAGGAA+GGG | - | 14604:16120-16139 | MS.gene00718:intergenic | 25.0% |
| ! | CTTATCTTTCATCTTATAAG+TGG | - | 14604:16177-16196 | MS.gene00718:intergenic | 25.0% |
| ! | GATGATTATGATGTTGAAAA+GGG | + | 14604:14787-14806 | MS.gene00718:intron | 25.0% |
| ! | GCAATATAAGCAATTAACTT+TGG | + | 14604:14477-14496 | MS.gene00718:intron | 25.0% |
| ! | GGTTCTTCTAAATATAATTC+AGG | - | 14604:13873-13892 | MS.gene00718:intergenic | 25.0% |
| ! | GTAAATCGACATTAAGTAAA+AGG | - | 14604:16130-16149 | MS.gene00718:intergenic | 25.0% |
| ! | TAATAGTAAAAGATAGACGA+AGG | + | 14604:15648-15667 | MS.gene00718:intron | 25.0% |
| ! | TGTACATATAGAGTATAACA+TGG | + | 14604:15834-15853 | MS.gene00718:intron | 25.0% |
| !! | AAGGTTACCAATTTTACTTT+TGG | + | 14604:14855-14874 | MS.gene00718:intron | 25.0% |
| !! | AATTCCATATTTGGTTTCTT+TGG | + | 14604:15870-15889 | MS.gene00718:intron | 25.0% |
| !! | ACTCTTTTAATCATAATTGC+AGG | + | 14604:15924-15943 | MS.gene00718:intron | 25.0% |
| !! | ATTTTATGAATCCATGTTGA+AGG | + | 14604:14836-14855 | MS.gene00718:intron | 25.0% |
| !!! | AGAAAAGTGCTAAAAATAAG+TGG | + | 14604:13750-13769 | MS.gene00718:CDS | 25.0% |
| !!! | CTTTTCTTCTTTGAAAAATC+AGG | - | 14604:13737-13756 | MS.gene00718:intergenic | 25.0% |
| AAGACCAAAGAAACCAAATA+TGG | - | 14604:15877-15896 | MS.gene00718:intergenic | 30.0% | |
| ACAAAGTGAATATTTGCATG+TGG | + | 14604:14109-14128 | MS.gene00718:intron | 30.0% | |
| ACAAATATTCAATACCCTTG+TGG | - | 14604:13819-13838 | MS.gene00718:intergenic | 30.0% | |
| ACATATTACCTGCTTATGAA+GGG | + | 14604:14281-14300 | MS.gene00718:CDS | 30.0% | |
| AGGATGAAGATAATGAAGAA+GGG | + | 14604:15962-15981 | MS.gene00718:intron | 30.0% | |
| ATATAGAGTATAACATGGAG+TGG | + | 14604:15839-15858 | MS.gene00718:intron | 30.0% | |
| ATGATGAAAGCAGCAAATAA+TGG | + | 14604:14558-14577 | MS.gene00718:CDS | 30.0% | |
| ATGGTTATGAAGCATAAACA+TGG | + | 14604:13894-13913 | MS.gene00718:intron | 30.0% | |
| CAAAGTGAATATTTGCATGT+GGG | + | 14604:14110-14129 | MS.gene00718:intron | 30.0% | |
| CAGTAAGTAATAGACTGATA+AGG | + | 14604:14988-15007 | MS.gene00718:intron | 30.0% | |
| CATTAAGTAAAAGGAAAGGA+AGG | - | 14604:16121-16140 | MS.gene00718:intergenic | 30.0% | |
| CGATGATTATGATGTTGAAA+AGG | + | 14604:14786-14805 | MS.gene00718:intron | 30.0% | |
| CTCACAAGTATAAGAATTTG+AGG | - | 14604:15481-15500 | MS.gene00718:intergenic | 30.0% | |
| GATAAACAAGAGTAACTGAT+AGG | - | 14604:15722-15741 | MS.gene00718:intergenic | 30.0% | |
| GTCATAGCTAATTCTACAAT+TGG | + | 14604:15533-15552 | MS.gene00718:intron | 30.0% | |
| TAATAGAAAAAGACTGCTGA+TGG | + | 14604:14522-14541 | MS.gene00718:intron | 30.0% | |
| TACATATTACCTGCTTATGA+AGG | + | 14604:14280-14299 | MS.gene00718:CDS | 30.0% | |
| TATCTGTAGCACATCATAAA+GGG | - | 14604:16223-16242 | MS.gene00718:intergenic | 30.0% | |
| TCGACATTAAGTAAAAGGAA+AGG | - | 14604:16125-16144 | MS.gene00718:intergenic | 30.0% | |
| TGTACTTGTATATCTGTTAC+AGG | + | 14604:15287-15306 | MS.gene00718:CDS | 30.0% | |
| TGTTTATGCTTCATAACCAT+AGG | - | 14604:13894-13913 | MS.gene00718:intergenic | 30.0% | |
| TTATCCACTTAGTAAAATGC+AGG | - | 14604:13956-13975 | MS.gene00718:intergenic | 30.0% | |
| TTCAATAAGAATTTGTGCAC+TGG | - | 14604:15437-15456 | MS.gene00718:intergenic | 30.0% | |
| TTGTACCTAAAAAACAGCAT+GGG | - | 14604:14442-14461 | MS.gene00718:intergenic | 30.0% | |
| TTGTAGAATTAGCTATGACA+CGG | - | 14604:15532-15551 | MS.gene00718:intergenic | 30.0% | |
| TTTCTGTAACTACTCTATCA+AGG | + | 14604:16253-16272 | MS.gene00718:intron | 30.0% | |
| ! | AAAATTGGTAACCTTCAACA+TGG | - | 14604:14850-14869 | MS.gene00718:intergenic | 30.0% |
| ! | AAATAAGTGGTCTTTGAAGA+AGG | + | 14604:13763-13782 | MS.gene00718:CDS | 30.0% |
| ! | ACATGGACTGAATAAAAAAG+TGG | + | 14604:14716-14735 | MS.gene00718:intron | 30.0% |
| ! | CATTTTACTAAGTGGATAAG+TGG | + | 14604:13957-13976 | MS.gene00718:intron | 30.0% |
| ! | TCTTTCATCTAGTCAACTTT+TGG | - | 14604:15623-15642 | MS.gene00718:intergenic | 30.0% |
| ! | TTTTATGGATTTCTTGTGAC+AGG | + | 14604:13643-13662 | MS.gene00718:intron | 30.0% |
| !! | GATTTGTTGTTGTATTACGT+AGG | + | 14604:14172-14191 | MS.gene00718:intron | 30.0% |
| !! | GGGTATTGAATATTTGTTCT+TGG | + | 14604:13822-13841 | MS.gene00718:intron | 30.0% |
| !! | TGTTTAGTTGATGATTGTTG+TGG | + | 14604:14057-14076 | MS.gene00718:intron | 30.0% |
| AAACTATAGGCCAAACCATT+GGG | + | 14604:15671-15690 | MS.gene00718:intron | 35.0% | |
| AACAGCATGATTTCAATTGC+AGG | - | 14604:13423-13442 | MS.gene00718:intergenic | 35.0% | |
| AGATAGACGAAGGAAACTAT+AGG | + | 14604:15658-15677 | MS.gene00718:intron | 35.0% | |
| ATCTGTTACAGGTGATGATT+GGG | + | 14604:15298-15317 | MS.gene00718:CDS | 35.0% | |
| ATGAAGACGAAGAAGTAGAT+AGG | + | 14604:14685-14704 | MS.gene00718:CDS | 35.0% | |
| ATGAAGCATAAACATGGACA+CGG | + | 14604:13900-13919 | MS.gene00718:intron | 35.0% | |
| CAATTGAAATCATGCTGTTG+CGG | + | 14604:13424-13443 | MS.gene00718:CDS | 35.0% | |
| CAGCATCTTTCATTAATCAG+CGG | + | 14604:16366-16385 | MS.gene00718:intron | 35.0% | |
| CATCATAATCATCGTCATCA+AGG | - | 14604:14780-14799 | MS.gene00718:intergenic | 35.0% | |
| CTATCTGTAGCACATCATAA+AGG | - | 14604:16224-16243 | MS.gene00718:intergenic | 35.0% | |
| GAGGATGAAGATAATGAAGA+AGG | + | 14604:15961-15980 | MS.gene00718:intron | 35.0% | |
| GATGAAGATAATGAAGAAGG+GGG | + | 14604:15964-15983 | MS.gene00718:intron | 35.0% | |
| GATGTGGACAATTCCATATT+TGG | + | 14604:15861-15880 | MS.gene00718:intron | 35.0% | |
| GGATGAAGATAATGAAGAAG+GGG | + | 14604:15963-15982 | MS.gene00718:intron | 35.0% | |
| GTACAATGTTCATGCAAGTT+CGG | + | 14604:13667-13686 | MS.gene00718:CDS | 35.0% | |
| GTTGTACCTAAAAAACAGCA+TGG | - | 14604:14443-14462 | MS.gene00718:intergenic | 35.0% | |
| TAACTACTCTATCAAGGAAG+TGG | + | 14604:16259-16278 | MS.gene00718:intron | 35.0% | |
| TAAGTGGATAAGTGGATAAG+TGG | + | 14604:13965-13984 | MS.gene00718:intron | 35.0% | |
| TACTTAGATGCCATAACTCA+CGG | - | 14604:15050-15069 | MS.gene00718:intergenic | 35.0% | |
| TATCTGTTACAGGTGATGAT+TGG | + | 14604:15297-15316 | MS.gene00718:CDS | 35.0% | |
| TGTACCTAAAAAACAGCATG+GGG | - | 14604:14441-14460 | MS.gene00718:intergenic | 35.0% | |
| TTATCGGGAAGTTTATGACT+GGG | + | 14604:13708-13727 | MS.gene00718:CDS | 35.0% | |
| TTCTAGATGACCCTGAAATT+GGG | - | 14604:14246-14265 | MS.gene00718:intergenic | 35.0% | |
| TTGTCAATAGGTTCTTCCTT+AGG | - | 14604:16462-16481 | MS.gene00718:intergenic | 35.0% | |
| TTGTTGTGGACATGAAAAGA+TGG | + | 14604:14071-14090 | MS.gene00718:intron | 35.0% | |
| TTTATCGGGAAGTTTATGAC+TGG | + | 14604:13707-13726 | MS.gene00718:CDS | 35.0% | |
| TTTGAAGGACTGTTGTCAAT+AGG | - | 14604:16474-16493 | MS.gene00718:intergenic | 35.0% | |
| ! | AAAACTGGTGATGATGATGA+AGG | + | 14604:14636-14655 | MS.gene00718:CDS | 35.0% |
| ! | AACTAACCTGCTTGATTTTC+AGG | - | 14604:15413-15432 | MS.gene00718:intergenic | 35.0% |
| ! | ACTGATGATGATGAAAACTC+TGG | + | 14604:15338-15357 | MS.gene00718:CDS | 35.0% |
| ! | ATGATGATGATGACGATGTA+TGG | + | 14604:16064-16083 | MS.gene00718:intron | 35.0% |
| ! | ATTTGCATGTGGGTTGTAAT+AGG | + | 14604:14120-14139 | MS.gene00718:intron | 35.0% |
| ! | TATGATGATGACGATGATGA+AGG | + | 14604:14740-14759 | MS.gene00718:intron | 35.0% |
| ! | TGATGATGATGACGATGTAT+GGG | + | 14604:16065-16084 | MS.gene00718:intron | 35.0% |
| ! | TTCATCTAGTCAACTTTTGG+AGG | - | 14604:15620-15639 | MS.gene00718:intergenic | 35.0% |
| ! | TTTTTCTGTTAAGGTTTGCG+AGG | + | 14604:13613-13632 | MS.gene00718:intron | 35.0% |
| !! | CATCATCACCAGTTTTATGA+CGG | - | 14604:14632-14651 | MS.gene00718:intergenic | 35.0% |
| !! | CGGATCAATTTTATTTGTCC+AGG | + | 14604:16386-16405 | MS.gene00718:intron | 35.0% |
| !! | TCAAGTTACTGATTCCACAA+GGG | + | 14604:13802-13821 | MS.gene00718:CDS | 35.0% |
| !! | TTGAAGAAGGATGGATTGAA+GGG | + | 14604:13776-13795 | MS.gene00718:CDS | 35.0% |
| !! | TTTGAAGAAGGATGGATTGA+AGG | + | 14604:13775-13794 | MS.gene00718:CDS | 35.0% |
| !!! | TTGCGAGGTGCATTTTTTTA+TGG | + | 14604:13628-13647 | MS.gene00718:intron | 35.0% |
| !!! | TTTCTTTTCCCCTTTGAAGT+AGG | - | 14604:16527-16546 | MS.gene00718:intergenic | 35.0% |
| AAAGAGCTGAAGAAGTTGCT+TGG | + | 14604:16006-16025 | MS.gene00718:CDS | 40.0% | |
| AAGAGAAGCCGTCATAAAAC+TGG | + | 14604:14621-14640 | MS.gene00718:CDS | 40.0% | |
| AAGAGCTGAAGAAGTTGCTT+GGG | + | 14604:16007-16026 | MS.gene00718:CDS | 40.0% | |
| AAGGGAGAAGTTAAAAGCGA+AGG | - | 14604:16102-16121 | MS.gene00718:intergenic | 40.0% | |
| ACATGGGAAGTTAGATGACA+AGG | + | 14604:14593-14612 | MS.gene00718:CDS | 40.0% | |
| ACTTAGATGCCATAACTCAC+GGG | - | 14604:15049-15068 | MS.gene00718:intergenic | 40.0% | |
| ACTTGAGTAGAGCTTGGATA+AGG | + | 14604:15019-15038 | MS.gene00718:intron | 40.0% | |
| AGAGAGAGAGAGAGTTAACT+CGG | + | 14604:15207-15226 | MS.gene00718:intron | 40.0% | |
| AGTATAACATGGAGTGGATG+TGG | + | 14604:15845-15864 | MS.gene00718:intron | 40.0% | |
| ATACTGAATACACCGTGTCT+TGG | + | 14604:14010-14029 | MS.gene00718:intron | 40.0% | |
| ATCCAAATCTTCCCTTTCCT+CGG | - | 14604:15372-15391 | MS.gene00718:intergenic | 40.0% | |
| CAATCCTTAACAAGCATACC+AGG | - | 14604:14339-14358 | MS.gene00718:intergenic | 40.0% | |
| CAATTTCAGGGTCATCTAGA+AGG | + | 14604:14245-14264 | MS.gene00718:CDS | 40.0% | |
| CCACTTAGTAAAATGCAGGT+TGG | - | 14604:13952-13971 | MS.gene00718:intergenic | 40.0% | |
| CTTCTAGATGACCCTGAAAT+TGG | - | 14604:14247-14266 | MS.gene00718:intergenic | 40.0% | |
| GAAACTATAGGCCAAACCAT+TGG | + | 14604:15670-15689 | MS.gene00718:intron | 40.0% | |
| GAGTTTATTGCCATTCCTGT+TGG | + | 14604:14311-14330 | MS.gene00718:intron | 40.0% | |
| GATATCCAAATCTCTCCCAA+TGG | - | 14604:15689-15708 | MS.gene00718:intergenic | 40.0% | |
| GCAGCAAATAATGGTGCATT+TGG | + | 14604:14567-14586 | MS.gene00718:CDS | 40.0% | |
| GGATTATTGCTCTGTCTTTG+TGG | + | 14604:13843-13862 | MS.gene00718:intron | 40.0% | |
| GGGGAAAAGAAAAGAAAACG+AGG | + | 14604:16535-16554 | MS.gene00718:CDS | 40.0% | |
| GTAGATAGGAAGAGTAGACA+TGG | + | 14604:14699-14718 | MS.gene00718:CDS | 40.0% | |
| TAAGGATAACCCGTGAGTTA+TGG | + | 14604:15037-15056 | MS.gene00718:intron | 40.0% | |
| TACAAAGCAGAAGGAACCTA+AGG | + | 14604:16443-16462 | MS.gene00718:CDS | 40.0% | |
| TACTCGAATCAAACGAGTGA+GGG | - | 14604:13563-13582 | MS.gene00718:intergenic | 40.0% | |
| TCCTCTTCATCAGATTCACT+CGG | - | 14604:16045-16064 | MS.gene00718:intergenic | 40.0% | |
| TGTAACTGCTACAAAGCAGA+AGG | + | 14604:16434-16453 | MS.gene00718:CDS | 40.0% | |
| ! | AAGTGGTCTTTGAAGAAGGA+TGG | + | 14604:13767-13786 | MS.gene00718:CDS | 40.0% |
| ! | AATGGTGCATTTGGTGAACA+TGG | + | 14604:14576-14595 | MS.gene00718:CDS | 40.0% |
| ! | ATGGTGCATTTGGTGAACAT+GGG | + | 14604:14577-14596 | MS.gene00718:CDS | 40.0% |
| ! | ATTGCAGGATGATGATGATG+AGG | + | 14604:15939-15958 | MS.gene00718:intron | 40.0% |
| ! | CCAACCTGCATTTTACTAAG+TGG | + | 14604:13949-13968 | MS.gene00718:intron | 40.0% |
| ! | CTGCTGATGGATATCAAAGA+TGG | + | 14604:14535-14554 | MS.gene00718:CDS | 40.0% |
| !! | ATTTGTCCAGGTTGATGATG+AGG | + | 14604:16398-16417 | MS.gene00718:intron | 40.0% |
| !! | GTCAAGTTACTGATTCCACA+AGG | + | 14604:13801-13820 | MS.gene00718:CDS | 40.0% |
| !! | TAACCTGCTTGATTTTCAGG+TGG | - | 14604:15410-15429 | MS.gene00718:intergenic | 40.0% |
| !! | TTACGTTTTGACCCAGCTTT+AGG | + | 14604:15753-15772 | MS.gene00718:intron | 40.0% |
| !!! | AGTTCCCCATGCTGTTTTTT+AGG | + | 14604:14434-14453 | MS.gene00718:intron | 40.0% |
| AAATCATGCTGTTGCGGATG+CGG | + | 14604:13430-13449 | MS.gene00718:CDS | 45.0% | |
| AACAGGTCAGTCCCAATTTC+AGG | + | 14604:14232-14251 | MS.gene00718:CDS | 45.0% | |
| AACTTCTTCAGCTCTTTCCC+AGG | - | 14604:16003-16022 | MS.gene00718:intergenic | 45.0% | |
| ACAGGTCAGTCCCAATTTCA+GGG | + | 14604:14233-14252 | MS.gene00718:CDS | 45.0% | |
| ATACCAGGATCCAACAGGAA+TGG | - | 14604:14324-14343 | MS.gene00718:intergenic | 45.0% | |
| ATCATCCTACTGTCGTTGAG+CGG | - | 14604:14410-14429 | MS.gene00718:intergenic | 45.0% | |
| ATCTTCCTCTCCGTTATCAG+AGG | - | 14604:14667-14686 | MS.gene00718:intergenic | 45.0% | |
| ATGACGATGATGAAGGTCCA+AGG | + | 14604:14747-14766 | MS.gene00718:intron | 45.0% | |
| CCAAACCATTGGGAGAGATT+TGG | + | 14604:15681-15700 | MS.gene00718:intron | 45.0% | |
| CCAAATCTCTCCCAATGGTT+TGG | - | 14604:15684-15703 | MS.gene00718:intergenic | 45.0% | |
| CCTGCTTATGAAGGGAAAGA+AGG | + | 14604:14289-14308 | MS.gene00718:CDS | 45.0% | |
| CCTTCTTTCCCTTCATAAGC+AGG | - | 14604:14292-14311 | MS.gene00718:intergenic | 45.0% | |
| CGTGGAACACCTACTTCAAA+GGG | + | 14604:16515-16534 | MS.gene00718:CDS | 45.0% | |
| GAAGATAATGAAGAAGGGGG+TGG | + | 14604:15967-15986 | MS.gene00718:intron | 45.0% | |
| GAAGGTCCTTCCTCTGATAA+CGG | + | 14604:14654-14673 | MS.gene00718:CDS | 45.0% | |
| GAATACACCGTGTCTTGGTA+AGG | + | 14604:14015-14034 | MS.gene00718:intron | 45.0% | |
| GACCTAACCTTACCAAGACA+CGG | - | 14604:14025-14044 | MS.gene00718:intergenic | 45.0% | |
| GTACTCGAATCAAACGAGTG+AGG | - | 14604:13564-13583 | MS.gene00718:intergenic | 45.0% | |
| GTGGAACACCTACTTCAAAG+GGG | + | 14604:16516-16535 | MS.gene00718:CDS | 45.0% | |
| GTTTCATCTTCCAAGAGCCA+AGG | - | 14604:14215-14234 | MS.gene00718:intergenic | 45.0% | |
| TATTACCGCTCAACGACAGT+AGG | + | 14604:14402-14421 | MS.gene00718:intron | 45.0% | |
| TCCAAATCTTCCCTTTCCTC+GGG | - | 14604:15371-15390 | MS.gene00718:intergenic | 45.0% | |
| TCCGAGTGAATCTGATGAAG+AGG | + | 14604:16041-16060 | MS.gene00718:CDS | 45.0% | |
| TCCTTCAAAACCTACAGCAC+AGG | + | 14604:16485-16504 | MS.gene00718:CDS | 45.0% | |
| TCGTGGAACACCTACTTCAA+AGG | + | 14604:16514-16533 | MS.gene00718:CDS | 45.0% | |
| TGACGATGATGAAGGTCCAA+GGG | + | 14604:14748-14767 | MS.gene00718:intron | 45.0% | |
| TGCTTTGTAGCAGTTACAGC+AGG | - | 14604:16432-16451 | MS.gene00718:intergenic | 45.0% | |
| TGGCTCTTGGAAGATGAAAC+AGG | + | 14604:14215-14234 | MS.gene00718:CDS | 45.0% | |
| TTCAACCTGTGCCAAAACCA+TGG | + | 14604:13501-13520 | MS.gene00718:CDS | 45.0% | |
| ! | AGAAGTACAAGAACAGGCCT+TGG | + | 14604:14195-14214 | MS.gene00718:CDS | 45.0% |
| ! | CGTAGGAGAAGTACAAGAAC+AGG | + | 14604:14189-14208 | MS.gene00718:intron | 45.0% |
| ! | CTTTAGGAACCTAACCCATG+AGG | + | 14604:15769-15788 | MS.gene00718:intron | 45.0% |
| ! | GGATCCTGGTATGCTTGTTA+AGG | + | 14604:14332-14351 | MS.gene00718:intron | 45.0% |
| ! | TGATGATTGGGAGCATGAAG+AGG | + | 14604:15310-15329 | MS.gene00718:CDS | 45.0% |
| ! | TGGGTTAGGTTCCTAAAGCT+GGG | - | 14604:15767-15786 | MS.gene00718:intergenic | 45.0% |
| !! | ATGGGTTAGGTTCCTAAAGC+TGG | - | 14604:15768-15787 | MS.gene00718:intergenic | 45.0% |
| !! | TCCTGTGCTGTAGGTTTTGA+AGG | - | 14604:16489-16508 | MS.gene00718:intergenic | 45.0% |
| !!! | TGCTTGATTTTCAGGTGGAG+CGG | - | 14604:15405-15424 | MS.gene00718:intergenic | 45.0% |
| AAACTCTGGCAATGATCCCG+AGG | + | 14604:15352-15371 | MS.gene00718:CDS | 50.0% | |
| AACCCATGAGGACTGATGAC+TGG | + | 14604:15781-15800 | MS.gene00718:intron | 50.0% | |
| AAGAAGTTGCTTGGGCGAAC+TGG | + | 14604:16015-16034 | MS.gene00718:CDS | 50.0% | |
| ATGATGAAGGTCCAAGGGAG+GGG | + | 14604:14753-14772 | MS.gene00718:intron | 50.0% | |
| ATGCCAGTCATCAGTCCTCA+TGG | - | 14604:15787-15806 | MS.gene00718:intergenic | 50.0% | |
| CAAGCATACCAGGATCCAAC+AGG | - | 14604:14329-14348 | MS.gene00718:intergenic | 50.0% | |
| CACCATCCTCATCATCAACC+TGG | - | 14604:16407-16426 | MS.gene00718:intergenic | 50.0% | |
| CACCGTGTCTTGGTAAGGTT+AGG | + | 14604:14020-14039 | MS.gene00718:intron | 50.0% | |
| CGCAAGACTTGAGTAGAGCT+TGG | + | 14604:15013-15032 | MS.gene00718:intron | 50.0% | |
| GATGATGAAGGTCCAAGGGA+GGG | + | 14604:14752-14771 | MS.gene00718:intron | 50.0% | |
| GCTCCACCTGAAAATCAAGC+AGG | + | 14604:15404-15423 | MS.gene00718:CDS | 50.0% | |
| GTCATCAGTCCTCATGGGTT+AGG | - | 14604:15781-15800 | MS.gene00718:intergenic | 50.0% | |
| TCCCGAGGAAAGGGAAGATT+TGG | + | 14604:15367-15386 | MS.gene00718:CDS | 50.0% | |
| TCCTCTCCGTTATCAGAGGA+AGG | - | 14604:14663-14682 | MS.gene00718:intergenic | 50.0% | |
| TCGAATCAAACGAGTGAGGG+TGG | - | 14604:13560-13579 | MS.gene00718:intergenic | 50.0% | |
| TGCCAGTCATCAGTCCTCAT+GGG | - | 14604:15786-15805 | MS.gene00718:intergenic | 50.0% | |
| TGGCAATGATCCCGAGGAAA+GGG | + | 14604:15358-15377 | MS.gene00718:CDS | 50.0% | |
| TTGCCATTCCTGTTGGATCC+TGG | + | 14604:14318-14337 | MS.gene00718:intron | 50.0% | |
| ! | GCAGGATGATGATGATGAGG+AGG | + | 14604:15942-15961 | MS.gene00718:intron | 50.0% |
| ! | GCGACTTTTCGCCATGGTTT+TGG | - | 14604:13515-13534 | MS.gene00718:intergenic | 50.0% |
| !! | GTCCAGGTTGATGATGAGGA+TGG | + | 14604:16402-16421 | MS.gene00718:intron | 50.0% |
| !! | TCCTTCCTCTGATAACGGAG+AGG | + | 14604:14659-14678 | MS.gene00718:CDS | 50.0% |
| !! | TTTGGAGCGACTTTTCGCCA+TGG | - | 14604:13521-13540 | MS.gene00718:intergenic | 50.0% |
| !!! | CTTGATTTTCAGGTGGAGCG+GGG | - | 14604:15403-15422 | MS.gene00718:intergenic | 50.0% |
| !!! | GCTTGATTTTCAGGTGGAGC+GGG | - | 14604:15404-15423 | MS.gene00718:intergenic | 50.0% |
| !!! | TTTCGCCATGGTTTTGGCAC+AGG | - | 14604:13509-13528 | MS.gene00718:intergenic | 50.0% |
| AAGTTGCTTGGGCGAACTGG+TGG | + | 14604:16018-16037 | MS.gene00718:CDS | 55.0% | |
| CGATGATGAAGGTCCAAGGG+AGG | + | 14604:14751-14770 | MS.gene00718:intron | 55.0% | |
| CTGGCAATGATCCCGAGGAA+AGG | + | 14604:15357-15376 | MS.gene00718:CDS | 55.0% | |
| GAAGTAGGTGTTCCACGAGC+AGG | - | 14604:16512-16531 | MS.gene00718:intergenic | 55.0% | |
| GCAGTTGCTTCCGTAGAGAC+CGG | - | 14604:13464-13483 | MS.gene00718:intergenic | 55.0% | |
| GGGGTGGTCTGAGTAAACCT+GGG | + | 14604:15983-16002 | MS.gene00718:CDS | 55.0% | |
| GGTGAAACCACCGGTCTCTA+CGG | + | 14604:13451-13470 | MS.gene00718:CDS | 55.0% | |
| ! | CAAGAACAGGCCTTGGCTCT+TGG | + | 14604:14202-14221 | MS.gene00718:CDS | 55.0% |
| ACGAGCAGGTCCTGTGCTGT+AGG | - | 14604:16498-16517 | MS.gene00718:intergenic | 60.0% | |
| CGCTCCAAATGCTCCACCTG+TGG | + | 14604:13532-13551 | MS.gene00718:CDS | 60.0% | |
| GGGGGTGGTCTGAGTAAACC+TGG | + | 14604:15982-16001 | MS.gene00718:CDS | 60.0% | |
| GTCATCAAGGTCCCCTCCCT+TGG | - | 14604:14767-14786 | MS.gene00718:intergenic | 60.0% | |
| GTTGCTTCCGTAGAGACCGG+TGG | - | 14604:13461-13480 | MS.gene00718:intergenic | 60.0% | |
| TACAGCACAGGACCTGCTCG+TGG | + | 14604:16497-16516 | MS.gene00718:CDS | 60.0% | |
| TGCGGATGCGGTGAAACCAC+CGG | + | 14604:13442-13461 | MS.gene00718:CDS | 60.0% | |
| TTCAGGTGGAGCGGGGACTT+CGG | - | 14604:15396-15415 | MS.gene00718:intergenic | 60.0% | |
| ! | GGTGCCACAGGTGGAGCATT+TGG | - | 14604:13539-13558 | MS.gene00718:intergenic | 60.0% |
| TCAGGTGGAGCGGGGACTTC+GGG | - | 14604:15395-15414 | MS.gene00718:intergenic | 65.0% | |
| !! | ACGAGTGAGGGTGGTGCCAC+AGG | - | 14604:13551-13570 | MS.gene00718:intergenic | 65.0% |
| !! | AGTGAGGGTGGTGCCACAGG+TGG | - | 14604:13548-13567 | MS.gene00718:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14604 | gene | 13415 | 16575 | 13415 | ID=MS.gene00718 |
| 14604 | mRNA | 13415 | 16575 | 13415 | ID=MS.gene00718.t1;Parent=MS.gene00718 |
| 14604 | exon | 13415 | 13579 | 13415 | ID=MS.gene00718.t1.exon1;Parent=MS.gene00718.t1 |
| 14604 | CDS | 13415 | 13579 | 13415 | ID=cds.MS.gene00718.t1;Parent=MS.gene00718.t1 |
| 14604 | exon | 13665 | 13823 | 13665 | ID=MS.gene00718.t1.exon2;Parent=MS.gene00718.t1 |
| 14604 | CDS | 13665 | 13823 | 13665 | ID=cds.MS.gene00718.t1;Parent=MS.gene00718.t1 |
| 14604 | exon | 14194 | 14328 | 14194 | ID=MS.gene00718.t1.exon3;Parent=MS.gene00718.t1 |
| 14604 | CDS | 14194 | 14328 | 14194 | ID=cds.MS.gene00718.t1;Parent=MS.gene00718.t1 |
| 14604 | exon | 14528 | 14734 | 14528 | ID=MS.gene00718.t1.exon4;Parent=MS.gene00718.t1 |
| 14604 | CDS | 14528 | 14734 | 14528 | ID=cds.MS.gene00718.t1;Parent=MS.gene00718.t1 |
| 14604 | exon | 15281 | 15425 | 15281 | ID=MS.gene00718.t1.exon5;Parent=MS.gene00718.t1 |
| 14604 | CDS | 15281 | 15425 | 15281 | ID=cds.MS.gene00718.t1;Parent=MS.gene00718.t1 |
| 14604 | exon | 15971 | 16080 | 15971 | ID=MS.gene00718.t1.exon6;Parent=MS.gene00718.t1 |
| 14604 | CDS | 15971 | 16080 | 15971 | ID=cds.MS.gene00718.t1;Parent=MS.gene00718.t1 |
| 14604 | exon | 16408 | 16575 | 16408 | ID=MS.gene00718.t1.exon7;Parent=MS.gene00718.t1 |
| 14604 | CDS | 16408 | 16575 | 16408 | ID=cds.MS.gene00718.t1;Parent=MS.gene00718.t1 |
| Gene Sequence |
| Protein sequence |
