Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064717.t1 | XP_013462187.1 | 93.1 | 262 | 0 | 1 | 1 | 244 | 1 | 262 | 8.00E-133 | 483 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064717.t1 | O94424 | 31.4 | 258 | 156 | 9 | 2 | 244 | 11 | 262 | 2.3e-19 | 97.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064717.t1 | B7FM96 | 93.1 | 262 | 0 | 1 | 1 | 244 | 1 | 262 | 5.8e-133 | 483.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene064717 | 0.835055 | 2.10E-56 | -1.69E-46 |
| MS.gene049786 | MS.gene064717 | 0.833621 | 4.80E-56 | -1.69E-46 |
| MS.gene050114 | MS.gene064717 | 0.813216 | 2.86E-51 | -1.69E-46 |
| MS.gene050288 | MS.gene064717 | 0.80256 | 5.29E-49 | -1.69E-46 |
| MS.gene050317 | MS.gene064717 | 0.839609 | 1.43E-57 | -1.69E-46 |
| MS.gene050320 | MS.gene064717 | 0.810266 | 1.26E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene064717 | 0.816506 | 5.34E-52 | -1.69E-46 |
| MS.gene051245 | MS.gene064717 | 0.814463 | 1.52E-51 | -1.69E-46 |
| MS.gene051452 | MS.gene064717 | 0.807105 | 5.95E-50 | -1.69E-46 |
| MS.gene051756 | MS.gene064717 | 0.835453 | 1.66E-56 | -1.69E-46 |
| MS.gene051757 | MS.gene064717 | 0.823407 | 1.41E-53 | -1.69E-46 |
| MS.gene051903 | MS.gene064717 | 0.813516 | 2.46E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene064717 | 0.826859 | 2.15E-54 | -1.69E-46 |
| MS.gene052434 | MS.gene064717 | 0.837031 | 6.61E-57 | -1.69E-46 |
| MS.gene053109 | MS.gene064717 | 0.804376 | 2.23E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene064717 | 0.842583 | 2.37E-58 | -1.69E-46 |
| MS.gene055603 | MS.gene064717 | 0.814103 | 1.83E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene064717 | 0.801377 | 9.27E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene064717 | 0.837087 | 6.39E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene064717 | 0.850685 | 1.45E-60 | -1.69E-46 |
| MS.gene057094 | MS.gene064717 | 0.814122 | 1.81E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene064717 | 0.816734 | 4.75E-52 | -1.69E-46 |
| MS.gene057234 | MS.gene064717 | 0.81475 | 1.31E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene064717 | 0.831756 | 1.39E-55 | -1.69E-46 |
| MS.gene058238 | MS.gene064717 | 0.804137 | 2.50E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene064717 | 0.829808 | 4.18E-55 | -1.69E-46 |
| MS.gene058906 | MS.gene064717 | 0.812554 | 4.00E-51 | -1.69E-46 |
| MS.gene059050 | MS.gene064717 | 0.831411 | 1.70E-55 | -1.69E-46 |
| MS.gene059360 | MS.gene064717 | 0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene064717 | 0.812941 | 3.29E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene064717 | 0.858703 | 6.87E-63 | -1.69E-46 |
| MS.gene060869 | MS.gene064717 | 0.801339 | 9.43E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene064717 | 0.805608 | 1.23E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene00720 | MS.gene064717 | PPI |
| MS.gene003049 | MS.gene064717 | PPI |
| MS.gene048168 | MS.gene064717 | PPI |
| MS.gene048169 | MS.gene064717 | PPI |
| MS.gene00718 | MS.gene064717 | PPI |
| MS.gene00719 | MS.gene064717 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064717.t1 | MTR_3g112490 | 93.130 | 262 | 0 | 1 | 1 | 244 | 1 | 262 | 0.0 | 502 |
| MS.gene064717.t1 | MTR_6g033365 | 57.447 | 188 | 77 | 3 | 52 | 237 | 1 | 187 | 2.80e-76 | 229 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064717.t1 | AT1G75510 | 63.492 | 252 | 65 | 4 | 15 | 240 | 6 | 256 | 4.35e-111 | 320 |
| MS.gene064717.t1 | AT3G52270 | 49.801 | 251 | 96 | 5 | 16 | 240 | 23 | 269 | 4.75e-84 | 251 |
| MS.gene064717.t1 | AT3G52270 | 43.056 | 144 | 55 | 3 | 16 | 133 | 23 | 165 | 1.14e-32 | 118 |
Find 53 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATAAATACCTTAAAAT+TGG | 0.220511 | 3.4:+97477823 | None:intergenic |
| TCGACAGATTTCTTGTATTC+AGG | 0.238269 | 3.4:+97477137 | None:intergenic |
| CATGAAAACATGGATGATTA+TGG | 0.267501 | 3.4:-97478068 | MS.gene064717:CDS |
| CAGCTCTCCCCGATCTCTTC+TGG | 0.310704 | 3.4:+97477453 | None:intergenic |
| TATTTGAAAGACAGCCTAAC+TGG | 0.312463 | 3.4:-97477411 | MS.gene064717:CDS |
| TTTGTATCAGTTTGTTTGAC+TGG | 0.345873 | 3.4:+97477481 | None:intergenic |
| CTCTTGAACAAGTTGCTTCA+AGG | 0.372812 | 3.4:+97477387 | None:intergenic |
| GAAACTAAGCCAACCATTCC+AGG | 0.403360 | 3.4:+97477848 | None:intergenic |
| CATGATTTGGCAACAGCAAC+AGG | 0.419759 | 3.4:+97481497 | None:intergenic |
| CAGAAGAGATCGGGGAGAGC+TGG | 0.423650 | 3.4:-97477452 | MS.gene064717:CDS |
| CAGCTCATAAGTTCCTTGAT+TGG | 0.425122 | 3.4:+97477163 | None:intergenic |
| AAAGAGAACCAGAAGAGATC+GGG | 0.447938 | 3.4:-97477461 | MS.gene064717:CDS |
| TGGATGGTTCTGCCATGATT+TGG | 0.454021 | 3.4:+97481484 | None:intergenic |
| AGTTGCTTCAAGGCCCAGTT+AGG | 0.465380 | 3.4:+97477397 | None:intergenic |
| TAGATTTCTTTGTCCTCTCC+CGG | 0.471186 | 3.4:+97478036 | None:intergenic |
| TTGGAAAGAGGTTGAGAAGG+TGG | 0.479012 | 3.4:+97481464 | None:intergenic |
| AATAAAAGAGGCGCCAATCA+AGG | 0.487240 | 3.4:-97477176 | MS.gene064717:CDS |
| ACGCACATGAGGCCAATGCC+TGG | 0.492472 | 3.4:-97477866 | MS.gene064717:CDS |
| CAGTTTACAATGGAGATGTC+TGG | 0.505356 | 3.4:-97479966 | MS.gene064717:CDS |
| AAGTAGCGGTGGTTCAAACT+TGG | 0.506657 | 3.4:-97481561 | MS.gene064717:CDS |
| GGTGACAAGGTTGCAATGGA+AGG | 0.512352 | 3.4:-97478125 | MS.gene064717:CDS |
| CAAAGAGAACCAGAAGAGAT+CGG | 0.521004 | 3.4:-97477462 | MS.gene064717:CDS |
| ATGGAAAATTGTGCCGGGAG+AGG | 0.527049 | 3.4:-97478049 | MS.gene064717:CDS |
| ATGGAAGATGAAAACAGTTA+CGG | 0.527896 | 3.4:-97481587 | MS.gene064717:CDS |
| CTGTTGCTGTTGCCAAATCA+TGG | 0.528694 | 3.4:-97481496 | MS.gene064717:CDS |
| GACATCGAAGGCAGAGAGAT+CGG | 0.529923 | 3.4:-97481537 | MS.gene064717:CDS |
| AAGCCAACCATTCCAGGCAT+TGG | 0.534227 | 3.4:+97477854 | None:intergenic |
| TTTAGGTGACAAGGTTGCAA+TGG | 0.535468 | 3.4:-97478129 | MS.gene064717:intron |
| TTGTGTGTATACAATAAAAG+AGG | 0.555378 | 3.4:-97477188 | MS.gene064717:CDS |
| AAAGAGGTTGAGAAGGTGGA+TGG | 0.557605 | 3.4:+97481468 | None:intergenic |
| TTGGCCTCATGTGCGTTCCA+CGG | 0.560162 | 3.4:+97477873 | None:intergenic |
| ATAATTATGTCAGTTTACAA+TGG | 0.563019 | 3.4:-97479976 | MS.gene064717:intron |
| AACAGTTACGGTGGAAGTAG+CGG | 0.579345 | 3.4:-97481575 | MS.gene064717:CDS |
| AGGCCAATGCCTGGAATGGT+TGG | 0.582117 | 3.4:-97477857 | MS.gene064717:CDS |
| AAGAGATCGGGGAGAGCTGG+AGG | 0.583017 | 3.4:-97477449 | MS.gene064717:CDS |
| ATGATTATGGAAAATTGTGC+CGG | 0.587668 | 3.4:-97478055 | MS.gene064717:CDS |
| CATGAGGCCAATGCCTGGAA+TGG | 0.600183 | 3.4:-97477861 | MS.gene064717:CDS |
| ATTTGAAAGACAGCCTAACT+GGG | 0.604731 | 3.4:-97477410 | MS.gene064717:CDS |
| ATGACCGTGGAACGCACATG+AGG | 0.615692 | 3.4:-97477877 | MS.gene064717:CDS |
| GTGACAAGGTTGCAATGGAA+GGG | 0.623466 | 3.4:-97478124 | MS.gene064717:CDS |
| ACTTTGGAAAGAGGTTGAGA+AGG | 0.626635 | 3.4:+97481461 | None:intergenic |
| AACTCTTGTAGGATAAGAAG+AGG | 0.627476 | 3.4:-97477510 | MS.gene064717:intron |
| TGATTATGGAAAATTGTGCC+GGG | 0.629025 | 3.4:-97478054 | MS.gene064717:CDS |
| TTCAAACTTGGAGACATCGA+AGG | 0.637014 | 3.4:-97481549 | MS.gene064717:CDS |
| AAGAGAACCAGAAGAGATCG+GGG | 0.640560 | 3.4:-97477460 | MS.gene064717:CDS |
| GAAGCCACGTCATGAAAACA+TGG | 0.640897 | 3.4:-97478078 | MS.gene064717:CDS |
| AAGATTATTGCTGATGACCG+TGG | 0.649545 | 3.4:-97477890 | MS.gene064717:CDS |
| ATCTTCTCTGAGACAAGCGA+AGG | 0.651215 | 3.4:-97479876 | MS.gene064717:intron |
| AGTTACGGTGGAAGTAGCGG+TGG | 0.667128 | 3.4:-97481572 | MS.gene064717:CDS |
| GAAGATGAAAACAGTTACGG+TGG | 0.674861 | 3.4:-97481584 | MS.gene064717:CDS |
| GTCTCAGAGAAGATGCACAT+AGG | 0.676365 | 3.4:+97479885 | None:intergenic |
| TCAAGAGACTGATCAACCTG+CGG | 0.732985 | 3.4:-97477371 | MS.gene064717:intron |
| CGAAGGCAGAGAGATCGGTG+TGG | 0.763887 | 3.4:-97481532 | MS.gene064717:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr3.4:97477747-97477766 | MS.gene064717:intron | 0.0% |
| !! | AATTAATTAATTAATCATTC+AGG | - | chr3.4:97477469-97477488 | MS.gene064717:CDS | 10.0% |
| !! | ATGATTAAAATAAGAAATTA+AGG | - | chr3.4:97480074-97480093 | MS.gene064717:intron | 10.0% |
| !! | GAATGATTAATTAATTAATT+AGG | + | chr3.4:97477469-97477488 | None:intergenic | 10.0% |
| !! | TAAAAATTATTAATTACTTG+GGG | + | chr3.4:97479593-97479612 | None:intergenic | 10.0% |
| !!! | TTAATTTCTTATTTTAATCA+TGG | + | chr3.4:97480075-97480094 | None:intergenic | 10.0% |
| !! | AATGCGAAAATAAAATAAAA+TGG | + | chr3.4:97481377-97481396 | None:intergenic | 15.0% |
| !! | ATCAATTACAATTTCATAAT+TGG | - | chr3.4:97478903-97478922 | MS.gene064717:intron | 15.0% |
| !! | CAAAATAAATACCTTAAAAT+TGG | + | chr3.4:97480885-97480904 | None:intergenic | 15.0% |
| !! | TAAAAAAGAAAAAGAAATGA+AGG | + | chr3.4:97479710-97479729 | None:intergenic | 15.0% |
| !! | TAAGATAATTATTGAATCTT+TGG | - | chr3.4:97480774-97480793 | MS.gene064717:intron | 15.0% |
| !!! | AATATAGATTTTCAACTATT+TGG | - | chr3.4:97477492-97477511 | MS.gene064717:CDS | 15.0% |
| !!! | ATTTTATTTTATTTTCGCAT+TGG | - | chr3.4:97481376-97481395 | MS.gene064717:intron | 15.0% |
| !!! | CACAATTTTTCATATTAATT+GGG | + | chr3.4:97478130-97478149 | None:intergenic | 15.0% |
| !! | AATAAGCAATCCTTTAAATA+TGG | + | chr3.4:97478546-97478565 | None:intergenic | 20.0% |
| !! | ATAACATAATATTTGAACCA+TGG | + | chr3.4:97479469-97479488 | None:intergenic | 20.0% |
| !! | ATAATTATGTCAGTTTACAA+TGG | - | chr3.4:97478729-97478748 | MS.gene064717:intron | 20.0% |
| !! | ATTCCATTAAGTTTCAATTA+TGG | + | chr3.4:97479858-97479877 | None:intergenic | 20.0% |
| !! | CAAAACATTTCCATATTTAA+AGG | - | chr3.4:97478533-97478552 | MS.gene064717:intron | 20.0% |
| !! | CATAATATTTGAACAAACAT+CGG | + | chr3.4:97479531-97479550 | None:intergenic | 20.0% |
| !! | CATTAGAAATAAAAGAACAT+TGG | + | chr3.4:97480379-97480398 | None:intergenic | 20.0% |
| !! | CTCAAATATACAATACAATA+TGG | + | chr3.4:97479887-97479906 | None:intergenic | 20.0% |
| !! | TACATATATAAATGCATTGA+AGG | - | chr3.4:97481437-97481456 | MS.gene064717:intron | 20.0% |
| !! | TATAAATCAATTCTCATGTT+TGG | + | chr3.4:97477943-97477962 | None:intergenic | 20.0% |
| !! | TATTATGACATTCATATTTG+TGG | - | chr3.4:97478588-97478607 | MS.gene064717:intron | 20.0% |
| !! | TGCAATGTATTTATTATCTT+CGG | - | chr3.4:97479972-97479991 | MS.gene064717:intron | 20.0% |
| !! | TTTATAAACCTAGTTATTCA+TGG | - | chr3.4:97477957-97477976 | MS.gene064717:intron | 20.0% |
| !!! | AAACAAATGAAAGTAGATTT+TGG | + | chr3.4:97479635-97479654 | None:intergenic | 20.0% |
| !!! | AACAGTTTTACCTTTATTTT+AGG | - | chr3.4:97480559-97480578 | MS.gene064717:intron | 20.0% |
| !!! | ATATTCAAAGAATACGTTTT+TGG | + | chr3.4:97478784-97478803 | None:intergenic | 20.0% |
| !!! | CAGTTTTATGGTTTAAATTA+TGG | - | chr3.4:97479041-97479060 | MS.gene064717:intron | 20.0% |
| !!! | GCACAATTTTTCATATTAAT+TGG | + | chr3.4:97478131-97478150 | None:intergenic | 20.0% |
| !!! | TCAAAAAGTATTGAAAAAGT+AGG | + | chr3.4:97479938-97479957 | None:intergenic | 20.0% |
| !!! | TGAAATTGTAATTGATGATT+AGG | + | chr3.4:97478899-97478918 | None:intergenic | 20.0% |
| !!! | TTTTACTTATATTAAGTACC+TGG | - | chr3.4:97480937-97480956 | MS.gene064717:intron | 20.0% |
| ! | AAAGAAAAGGTCAAAAATTC+GGG | + | chr3.4:97480166-97480185 | None:intergenic | 25.0% |
| ! | AAAGTGATTAAACCAAAATC+AGG | + | chr3.4:97477359-97477378 | None:intergenic | 25.0% |
| ! | AAATCACAATAAGAGTTCAT+TGG | - | chr3.4:97481084-97481103 | MS.gene064717:intron | 25.0% |
| ! | AAGTAAATTGTCGAGTTAAT+TGG | - | chr3.4:97477832-97477851 | MS.gene064717:intron | 25.0% |
| ! | AAGTGATTAAACCAAAATCA+GGG | + | chr3.4:97477358-97477377 | None:intergenic | 25.0% |
| ! | AAGTTTATGTAGTGATTCAT+TGG | - | chr3.4:97479275-97479294 | MS.gene064717:intron | 25.0% |
| ! | ACAAATTGACAAGTAAAAAG+TGG | - | chr3.4:97479241-97479260 | MS.gene064717:intron | 25.0% |
| ! | ACAATTTACTTTATTACCCT+TGG | + | chr3.4:97477823-97477842 | None:intergenic | 25.0% |
| ! | AGAATAATTCTACAATTCAG+AGG | + | chr3.4:97480235-97480254 | None:intergenic | 25.0% |
| ! | ATCAAATGACAAAAGAAAAG+TGG | - | chr3.4:97479210-97479229 | MS.gene064717:intron | 25.0% |
| ! | ATCAATAGAAAAAACGACTT+TGG | + | chr3.4:97477263-97477282 | None:intergenic | 25.0% |
| ! | GAAAGAAAAGGTCAAAAATT+CGG | + | chr3.4:97480167-97480186 | None:intergenic | 25.0% |
| ! | GTAAACTGACATAATTATGA+AGG | + | chr3.4:97478727-97478746 | None:intergenic | 25.0% |
| ! | TCTAGATTCAAATTGTGAAT+TGG | - | chr3.4:97479072-97479091 | MS.gene064717:intron | 25.0% |
| ! | TGAATAATGATTTGAAGAGT+AGG | - | chr3.4:97478338-97478357 | MS.gene064717:intron | 25.0% |
| ! | TTATGCAGTTCAAAAAACAA+AGG | - | chr3.4:97479758-97479777 | MS.gene064717:intron | 25.0% |
| ! | TTGCCATAATTGAAACTTAA+TGG | - | chr3.4:97479852-97479871 | MS.gene064717:intron | 25.0% |
| ! | TTGTGTGTATACAATAAAAG+AGG | - | chr3.4:97481517-97481536 | MS.gene064717:CDS | 25.0% |
| !! | ATTTTTGACCTTTTCTTTCA+TGG | - | chr3.4:97480168-97480187 | MS.gene064717:intron | 25.0% |
| !! | CACTGTGATTTAACAATTTT+GGG | - | chr3.4:97478459-97478478 | MS.gene064717:intron | 25.0% |
| !! | CTTAGTTTCATCCAATTTTA+AGG | - | chr3.4:97480871-97480890 | MS.gene064717:intron | 25.0% |
| !! | TACTTGTTAGATTAGATTGT+AGG | - | chr3.4:97477380-97477399 | MS.gene064717:CDS | 25.0% |
| !! | TCACTGTGATTTAACAATTT+TGG | - | chr3.4:97478458-97478477 | MS.gene064717:intron | 25.0% |
| !! | TGATGATTTCATCAGTTTTA+TGG | - | chr3.4:97479029-97479048 | MS.gene064717:intron | 25.0% |
| !! | TTGAATCTTGAATTAGTTTG+AGG | + | chr3.4:97479183-97479202 | None:intergenic | 25.0% |
| !! | TTTTATATTACATGTCTGCA+TGG | + | chr3.4:97479005-97479024 | None:intergenic | 25.0% |
| !!! | ACTTTGATTTTATGCTGTTT+AGG | - | chr3.4:97477428-97477447 | MS.gene064717:CDS | 25.0% |
| !!! | TTATGTTTTGCTATGTCAAA+AGG | + | chr3.4:97479126-97479145 | None:intergenic | 25.0% |
| AAAAGTAGATCTGACATAGA+AGG | - | chr3.4:97480296-97480315 | MS.gene064717:intron | 30.0% | |
| AACCAAAATTGCAATTGCAT+AGG | + | chr3.4:97477560-97477579 | None:intergenic | 30.0% | |
| AACCTTGTCACCTAAAATAA+AGG | + | chr3.4:97480572-97480591 | None:intergenic | 30.0% | |
| AAGAAAAGGTCAAAAATTCG+GGG | + | chr3.4:97480165-97480184 | None:intergenic | 30.0% | |
| AATGACAAAAGAAAAGTGGT+TGG | - | chr3.4:97479214-97479233 | MS.gene064717:intron | 30.0% | |
| ACAATTAAGCGATAGTTCAA+TGG | + | chr3.4:97480735-97480754 | None:intergenic | 30.0% | |
| ATAATCTTCCAGTTGAATCA+AGG | + | chr3.4:97480803-97480822 | None:intergenic | 30.0% | |
| ATATGCAAAAAAACACCAGT+TGG | + | chr3.4:97478308-97478327 | None:intergenic | 30.0% | |
| ATATTTGAACCATGGTTAAC+TGG | + | chr3.4:97479461-97479480 | None:intergenic | 30.0% | |
| ATGATTATGGAAAATTGTGC+CGG | - | chr3.4:97480650-97480669 | MS.gene064717:intron | 30.0% | |
| ATGGAAGATGAAAACAGTTA+CGG | - | chr3.4:97477118-97477137 | MS.gene064717:CDS | 30.0% | |
| ATTGACAAGTAAAAAGTGGT+TGG | - | chr3.4:97479245-97479264 | MS.gene064717:intron | 30.0% | |
| CAAAAAAAAAAACATACCGC+AGG | + | chr3.4:97481353-97481372 | None:intergenic | 30.0% | |
| CATGAAAACATGGATGATTA+TGG | - | chr3.4:97480637-97480656 | MS.gene064717:intron | 30.0% | |
| CTACACAACGATATTATTGT+TGG | - | chr3.4:97480019-97480038 | MS.gene064717:intron | 30.0% | |
| GATTAAAAATCGTCAAGTAC+AGG | - | chr3.4:97480693-97480712 | MS.gene064717:intron | 30.0% | |
| GTAAAAGTTAACATGAGCAA+TGG | + | chr3.4:97480923-97480942 | None:intergenic | 30.0% | |
| GTAATTGAAATCCAAATGAG+CGG | + | chr3.4:97478025-97478044 | None:intergenic | 30.0% | |
| TAAAACTGTTACCAAACTCA+AGG | + | chr3.4:97480549-97480568 | None:intergenic | 30.0% | |
| TACAATTAAAACGTGTCATG+AGG | + | chr3.4:97480206-97480225 | None:intergenic | 30.0% | |
| TACTTATATTAAGTACCTGG+CGG | - | chr3.4:97480940-97480959 | MS.gene064717:intron | 30.0% | |
| TAGTAATCAATCCTGGAAAA+TGG | + | chr3.4:97478503-97478522 | None:intergenic | 30.0% | |
| TATATTCGATTTCTGACCAA+GGG | - | chr3.4:97477804-97477823 | MS.gene064717:intron | 30.0% | |
| TCCATGTATAATATACCAAC+TGG | - | chr3.4:97478290-97478309 | MS.gene064717:intron | 30.0% | |
| TCGATTCATGAATGGAAAAA+AGG | + | chr3.4:97479102-97479121 | None:intergenic | 30.0% | |
| TGCAAATCAAATTCCATGTT+TGG | + | chr3.4:97477885-97477904 | None:intergenic | 30.0% | |
| TGCGATTCATCATAATGAAT+TGG | - | chr3.4:97479330-97479349 | MS.gene064717:intron | 30.0% | |
| ! | ACCAGTTGGTATATTATACA+TGG | + | chr3.4:97478294-97478313 | None:intergenic | 30.0% |
| ! | ATCCTATGCAATTGCAATTT+TGG | - | chr3.4:97477555-97477574 | MS.gene064717:intron | 30.0% |
| ! | ATTTTCCAGGATTGATTACT+AGG | - | chr3.4:97478502-97478521 | MS.gene064717:intron | 30.0% |
| ! | GAGACTATGCTTTTATATCT+GGG | - | chr3.4:97480041-97480060 | MS.gene064717:intron | 30.0% |
| ! | TATTGCTGATTATGTTGAGT+TGG | - | chr3.4:97479486-97479505 | MS.gene064717:intron | 30.0% |
| ! | TTTGTATCAGTTTGTTTGAC+TGG | + | chr3.4:97481227-97481246 | None:intergenic | 30.0% |
| !!! | AATTGGTTTTCCGGATTAAT+CGG | - | chr3.4:97477701-97477720 | MS.gene064717:intron | 30.0% |
| !!! | CTGCGGTATGTTTTTTTTTT+TGG | - | chr3.4:97481351-97481370 | MS.gene064717:intron | 30.0% |
| !!! | TACCTTTATTTTAGGTGACA+AGG | - | chr3.4:97480567-97480586 | MS.gene064717:intron | 30.0% |
| AAAGGTGACCATGAAAGAAA+AGG | + | chr3.4:97480179-97480198 | None:intergenic | 35.0% | |
| AACGTGTCATGAGGAAAAAA+AGG | + | chr3.4:97480197-97480216 | None:intergenic | 35.0% | |
| AACTCTTGTAGGATAAGAAG+AGG | - | chr3.4:97481195-97481214 | MS.gene064717:intron | 35.0% | |
| AAGAACCTAGTAATCAATCC+TGG | + | chr3.4:97478510-97478529 | None:intergenic | 35.0% | |
| AATCAAATTCCATGTTTGGC+TGG | + | chr3.4:97477881-97477900 | None:intergenic | 35.0% | |
| ACAGTGAAACATTCAAATCG+AGG | + | chr3.4:97478445-97478464 | None:intergenic | 35.0% | |
| ACTTGTCCACTTCATATAGA+TGG | - | chr3.4:97478242-97478261 | MS.gene064717:intron | 35.0% | |
| AGAAAAGGTCAAAAATTCGG+GGG | + | chr3.4:97480164-97480183 | None:intergenic | 35.0% | |
| ATCTATATGAAGTGGACAAG+TGG | + | chr3.4:97478243-97478262 | None:intergenic | 35.0% | |
| ATTTGAAAGACAGCCTAACT+GGG | - | chr3.4:97481295-97481314 | MS.gene064717:intron | 35.0% | |
| CAAAAGGTTCGATTCATGAA+TGG | + | chr3.4:97479110-97479129 | None:intergenic | 35.0% | |
| CAGTGAAACATTCAAATCGA+GGG | + | chr3.4:97478444-97478463 | None:intergenic | 35.0% | |
| CAGTTATCACAGTAAAAGCT+TGG | - | chr3.4:97480520-97480539 | MS.gene064717:intron | 35.0% | |
| CAGTTCAAAAAACAAAGGTG+AGG | - | chr3.4:97479763-97479782 | MS.gene064717:intron | 35.0% | |
| GCATTAAATTACAGAAGTCG+CGG | - | chr3.4:97478083-97478102 | MS.gene064717:CDS | 35.0% | |
| GTATATTCGATTTCTGACCA+AGG | - | chr3.4:97477803-97477822 | MS.gene064717:intron | 35.0% | |
| GTATGATACAGTAGATTCTC+AGG | - | chr3.4:97481025-97481044 | MS.gene064717:intron | 35.0% | |
| GTGATTCATTGGAATGAATC+AGG | - | chr3.4:97479286-97479305 | MS.gene064717:intron | 35.0% | |
| TAAACTTGATATCCAACCCA+GGG | + | chr3.4:97477728-97477747 | None:intergenic | 35.0% | |
| TAGTTGCCATCTATATGAAG+TGG | + | chr3.4:97478251-97478270 | None:intergenic | 35.0% | |
| TATCGTTGTGTAGTAGATCA+AGG | + | chr3.4:97480012-97480031 | None:intergenic | 35.0% | |
| TATTTGAAAGACAGCCTAAC+TGG | - | chr3.4:97481294-97481313 | MS.gene064717:intron | 35.0% | |
| TCCTCATATAAAACTGCAAG+AGG | + | chr3.4:97480126-97480145 | None:intergenic | 35.0% | |
| TCGACAGATTTCTTGTATTC+AGG | + | chr3.4:97481571-97481590 | None:intergenic | 35.0% | |
| TGATTATGGAAAATTGTGCC+GGG | - | chr3.4:97480651-97480670 | MS.gene064717:intron | 35.0% | |
| TGTCATTCTGATGAATTGCA+TGG | - | chr3.4:97478184-97478203 | MS.gene064717:intron | 35.0% | |
| TTAAAAGTTTGTGGCAACCA+TGG | + | chr3.4:97478399-97478418 | None:intergenic | 35.0% | |
| TTAAACTTGATATCCAACCC+AGG | + | chr3.4:97477729-97477748 | None:intergenic | 35.0% | |
| TTGTAAGATCCAGTTAACCA+TGG | - | chr3.4:97479449-97479468 | MS.gene064717:intron | 35.0% | |
| ! | GAAAAAACGACTTTGGAAAG+AGG | + | chr3.4:97477256-97477275 | None:intergenic | 35.0% |
| ! | GAATCTCGATTTGATAACCA+TGG | - | chr3.4:97478379-97478398 | MS.gene064717:intron | 35.0% |
| ! | GGAGACTATGCTTTTATATC+TGG | - | chr3.4:97480040-97480059 | MS.gene064717:intron | 35.0% |
| ! | GGCAAAATGAGTTTTTGCAT+GGG | + | chr3.4:97478423-97478442 | None:intergenic | 35.0% |
| ! | TCTTTCACTATCCCTGATTT+TGG | - | chr3.4:97477344-97477363 | MS.gene064717:intron | 35.0% |
| ! | TTTGGTTTCCTTGATTCAAC+TGG | - | chr3.4:97480792-97480811 | MS.gene064717:intron | 35.0% |
| !! | ACCTCTTGCAGTTTTATATG+AGG | - | chr3.4:97480122-97480141 | MS.gene064717:intron | 35.0% |
| !! | TACTCTTCTGAAACTCTTGT+AGG | - | chr3.4:97481184-97481203 | MS.gene064717:intron | 35.0% |
| !!! | AGCACTCGTCACTTTTTTTT+AGG | + | chr3.4:97480473-97480492 | None:intergenic | 35.0% |
| !!! | GCACTCGTCACTTTTTTTTA+GGG | + | chr3.4:97480472-97480491 | None:intergenic | 35.0% |
| AAAAGAACCTGAAGATGAGC+AGG | + | chr3.4:97477307-97477326 | None:intergenic | 40.0% | |
| AAAAGGTCAAAAATTCGGGG+GGG | + | chr3.4:97480162-97480181 | None:intergenic | 40.0% | |
| AAAGAGAACCAGAAGAGATC+GGG | - | chr3.4:97481244-97481263 | MS.gene064717:intron | 40.0% | |
| AAGATTATTGCTGATGACCG+TGG | - | chr3.4:97480815-97480834 | MS.gene064717:intron | 40.0% | |
| AAGCTTGGTTTCCTTGAGTT+TGG | - | chr3.4:97480535-97480554 | MS.gene064717:intron | 40.0% | |
| AATTGCTGCAGCAGAAATAG+TGG | + | chr3.4:97481475-97481494 | None:intergenic | 40.0% | |
| ATCTCTAGCGTGTATCTACA+CGG | + | chr3.4:97479377-97479396 | None:intergenic | 40.0% | |
| ATGCATGGAGTAATTCTGTG+GGG | - | chr3.4:97481153-97481172 | MS.gene064717:intron | 40.0% | |
| ATTCAAACTGAGACCTAGAG+AGG | + | chr3.4:97477608-97477627 | None:intergenic | 40.0% | |
| ATTGCTGCAGCAGAAATAGT+GGG | + | chr3.4:97481474-97481493 | None:intergenic | 40.0% | |
| CAAAGAGAACCAGAAGAGAT+CGG | - | chr3.4:97481243-97481262 | MS.gene064717:intron | 40.0% | |
| CAGCTCATAAGTTCCTTGAT+TGG | + | chr3.4:97481545-97481564 | None:intergenic | 40.0% | |
| CAGTTTACAATGGAGATGTC+TGG | - | chr3.4:97478739-97478758 | MS.gene064717:intron | 40.0% | |
| CATGCATGGAGTAATTCTGT+GGG | - | chr3.4:97481152-97481171 | MS.gene064717:intron | 40.0% | |
| CCATAGCACCATGAATAACT+AGG | + | chr3.4:97477968-97477987 | None:intergenic | 40.0% | |
| CTCTTGAACAAGTTGCTTCA+AGG | + | chr3.4:97481321-97481340 | None:intergenic | 40.0% | |
| CTGCCTCTAATCTAATATCG+TGG | - | chr3.4:97479683-97479702 | MS.gene064717:intron | 40.0% | |
| GAAAAGGTCAAAAATTCGGG+GGG | + | chr3.4:97480163-97480182 | None:intergenic | 40.0% | |
| GAAGATGAAAACAGTTACGG+TGG | - | chr3.4:97477121-97477140 | MS.gene064717:CDS | 40.0% | |
| GAAGATGCAAACGCTGAATA+AGG | - | chr3.4:97481589-97481608 | MS.gene064717:CDS | 40.0% | |
| GGACCACGATATTAGATTAG+AGG | + | chr3.4:97479689-97479708 | None:intergenic | 40.0% | |
| GTTGTGTAGTAGATCAAGGA+GGG | + | chr3.4:97480008-97480027 | None:intergenic | 40.0% | |
| TAGATTAGAGGCAGAGTTGA+AGG | + | chr3.4:97479677-97479696 | None:intergenic | 40.0% | |
| TAGATTTCTTTGTCCTCTCC+CGG | + | chr3.4:97480672-97480691 | None:intergenic | 40.0% | |
| TGACTGTCTTAAAGCAACAC+AGG | + | chr3.4:97478691-97478710 | None:intergenic | 40.0% | |
| TGCATGGGCTTAAAAGTTTG+TGG | + | chr3.4:97478408-97478427 | None:intergenic | 40.0% | |
| TGGCGTATATTCGAGGTTAA+TGG | + | chr3.4:97477861-97477880 | None:intergenic | 40.0% | |
| TTCAAACTTGGAGACATCGA+AGG | - | chr3.4:97477156-97477175 | MS.gene064717:CDS | 40.0% | |
| TTGTGTAGTAGATCAAGGAG+GGG | + | chr3.4:97480007-97480026 | None:intergenic | 40.0% | |
| TTTAGGTGACAAGGTTGCAA+TGG | - | chr3.4:97480576-97480595 | MS.gene064717:intron | 40.0% | |
| TTTCTTATCCTGTGCCCTTA+GGG | - | chr3.4:97480431-97480450 | MS.gene064717:intron | 40.0% | |
| ! | ACTTTGGAAAGAGGTTGAGA+AGG | + | chr3.4:97477247-97477266 | None:intergenic | 40.0% |
| ! | AGCTTTGCTATGCCTCAATT+GGG | - | chr3.4:97477671-97477690 | MS.gene064717:intron | 40.0% |
| ! | ATATTTGTGGACTGTGCACT+AGG | - | chr3.4:97478601-97478620 | MS.gene064717:intron | 40.0% |
| ! | CCTAGTTATTCATGGTGCTA+TGG | - | chr3.4:97477965-97477984 | MS.gene064717:intron | 40.0% |
| ! | CGCTAGAGATTTGTATCGAT+TGG | - | chr3.4:97479387-97479406 | MS.gene064717:intron | 40.0% |
| ! | GCATTGGAACACTCTGATTT+TGG | - | chr3.4:97481392-97481411 | MS.gene064717:intron | 40.0% |
| ! | GGGCAAAATGAGTTTTTGCA+TGG | + | chr3.4:97478424-97478443 | None:intergenic | 40.0% |
| ! | TCATCCATGTTTTCATGACG+TGG | + | chr3.4:97480634-97480653 | None:intergenic | 40.0% |
| !! | AATAAAAGAGGCGCCAATCA+AGG | - | chr3.4:97481529-97481548 | MS.gene064717:CDS | 40.0% |
| !! | TGCTGATTATGTTGAGTTGG+TGG | - | chr3.4:97479489-97479508 | MS.gene064717:intron | 40.0% |
| !!! | ATTTTGGTTTCTCACAGCTC+TGG | - | chr3.4:97481408-97481427 | MS.gene064717:intron | 40.0% |
| AAAGAGGTTGAGAAGGTGGA+TGG | + | chr3.4:97477240-97477259 | None:intergenic | 45.0% | |
| AAAGGTCAAAAATTCGGGGG+GGG | + | chr3.4:97480161-97480180 | None:intergenic | 45.0% | |
| AACAGTTACGGTGGAAGTAG+CGG | - | chr3.4:97477130-97477149 | MS.gene064717:CDS | 45.0% | |
| AAGAGAACCAGAAGAGATCG+GGG | - | chr3.4:97481245-97481264 | MS.gene064717:intron | 45.0% | |
| AAGTAGCGGTGGTTCAAACT+TGG | - | chr3.4:97477144-97477163 | MS.gene064717:CDS | 45.0% | |
| AATGCAACGAATGCTGCTGT+AGG | + | chr3.4:97478068-97478087 | None:intergenic | 45.0% | |
| AGGCATAGCAAAGCTCCATA+TGG | + | chr3.4:97477666-97477685 | None:intergenic | 45.0% | |
| ATATTAAGTACCTGGCGGTG+TGG | - | chr3.4:97480945-97480964 | MS.gene064717:intron | 45.0% | |
| ATGCACACACGCACATTTGA+AGG | + | chr3.4:97481135-97481154 | None:intergenic | 45.0% | |
| CAATCCTGGAAAATGGCACA+TGG | + | chr3.4:97478496-97478515 | None:intergenic | 45.0% | |
| CGTTGTGTAGTAGATCAAGG+AGG | + | chr3.4:97480009-97480028 | None:intergenic | 45.0% | |
| GAAACTAAGCCAACCATTCC+AGG | + | chr3.4:97480860-97480879 | None:intergenic | 45.0% | |
| GAAGCCACGTCATGAAAACA+TGG | - | chr3.4:97480627-97480646 | MS.gene064717:intron | 45.0% | |
| GAATATACGCCAGCCAAACA+TGG | - | chr3.4:97477869-97477888 | MS.gene064717:CDS | 45.0% | |
| GAGGTTTCACTGCTACAAAG+TGG | + | chr3.4:97480107-97480126 | None:intergenic | 45.0% | |
| GCATGCATGGAGTAATTCTG+TGG | - | chr3.4:97481151-97481170 | MS.gene064717:intron | 45.0% | |
| GTCTCAGAGAAGATGCACAT+AGG | + | chr3.4:97478823-97478842 | None:intergenic | 45.0% | |
| GTGACAAGGTTGCAATGGAA+GGG | - | chr3.4:97480581-97480600 | MS.gene064717:intron | 45.0% | |
| GTTTCTTATCCTGTGCCCTT+AGG | - | chr3.4:97480430-97480449 | MS.gene064717:intron | 45.0% | |
| TAGCAAAGCTCCATATGGAC+TGG | + | chr3.4:97477661-97477680 | None:intergenic | 45.0% | |
| TCAAGAGACTGATCAACCTG+CGG | - | chr3.4:97481334-97481353 | MS.gene064717:intron | 45.0% | |
| TGGTCCAACACAAGAACTGT+TGG | + | chr3.4:97477641-97477660 | None:intergenic | 45.0% | |
| TTGCTATGCCTCAATTGGGA+CGG | - | chr3.4:97477675-97477694 | MS.gene064717:intron | 45.0% | |
| TTGGAAAGAGGTTGAGAAGG+TGG | + | chr3.4:97477244-97477263 | None:intergenic | 45.0% | |
| TTGTGTTGGACCAGTCCATA+TGG | - | chr3.4:97477648-97477667 | MS.gene064717:intron | 45.0% | |
| ! | CATGATTTGGCAACAGCAAC+AGG | + | chr3.4:97477211-97477230 | None:intergenic | 45.0% |
| ! | CTGTTGCTGTTGCCAAATCA+TGG | - | chr3.4:97477209-97477228 | MS.gene064717:CDS | 45.0% |
| ! | CTTGCTAACTTGTGCCCTAA+GGG | + | chr3.4:97480448-97480467 | None:intergenic | 45.0% |
| ! | GAGCTTTGCTATGCCTCAAT+TGG | - | chr3.4:97477670-97477689 | MS.gene064717:intron | 45.0% |
| ! | TCTTGCTAACTTGTGCCCTA+AGG | + | chr3.4:97480449-97480468 | None:intergenic | 45.0% |
| ! | TGGATGGTTCTGCCATGATT+TGG | + | chr3.4:97477224-97477243 | None:intergenic | 45.0% |
| !! | ATCTTCTCTGAGACAAGCGA+AGG | - | chr3.4:97478829-97478848 | MS.gene064717:intron | 45.0% |
| !! | AATAAAAATTATTAATTACT+TGG | + | chr3.4:97479595-97479614 | None:intergenic | 5.0% |
| !! | ATAAAAATTATTAATTACTT+GGG | + | chr3.4:97479594-97479613 | None:intergenic | 5.0% |
| AAATCCAAATGAGCGGCCGA+AGG | + | chr3.4:97478018-97478037 | None:intergenic | 50.0% | |
| AACCCAGGGACCGATTAATC+CGG | + | chr3.4:97477714-97477733 | None:intergenic | 50.0% | |
| AAGCCAACCATTCCAGGCAT+TGG | + | chr3.4:97480854-97480873 | None:intergenic | 50.0% | |
| AAGGTCAAAAATTCGGGGGG+GGG | + | chr3.4:97480160-97480179 | None:intergenic | 50.0% | |
| AATGTGCGTGTGTGCATGCA+TGG | - | chr3.4:97481138-97481157 | MS.gene064717:intron | 50.0% | |
| AGACGATCCTGCTCATCTTC+AGG | - | chr3.4:97477297-97477316 | MS.gene064717:intron | 50.0% | |
| AGATGAGCAGGATCGTCTTC+AGG | + | chr3.4:97477295-97477314 | None:intergenic | 50.0% | |
| AGTTGCTTCAAGGCCCAGTT+AGG | + | chr3.4:97481311-97481330 | None:intergenic | 50.0% | |
| ATGGAAAATTGTGCCGGGAG+AGG | - | chr3.4:97480656-97480675 | MS.gene064717:intron | 50.0% | |
| CAATTCCACCGTCCCAATTG+AGG | + | chr3.4:97477686-97477705 | None:intergenic | 50.0% | |
| CTCAATTGGGACGGTGGAAT+TGG | - | chr3.4:97477684-97477703 | MS.gene064717:intron | 50.0% | |
| GACATCGAAGGCAGAGAGAT+CGG | - | chr3.4:97477168-97477187 | MS.gene064717:CDS | 50.0% | |
| GCTGTGTGCACAAAGTTCAG+GGG | + | chr3.4:97478221-97478240 | None:intergenic | 50.0% | |
| GGAGCCAACAGTTCTTGTGT+TGG | - | chr3.4:97477634-97477653 | MS.gene064717:intron | 50.0% | |
| GGATCGTCTTCAGGAAGAAG+AGG | + | chr3.4:97477286-97477305 | None:intergenic | 50.0% | |
| GGCTGTGTGCACAAAGTTCA+GGG | + | chr3.4:97478222-97478241 | None:intergenic | 50.0% | |
| GGTCTCAGTTTGAATCCTCC+AGG | - | chr3.4:97477613-97477632 | MS.gene064717:intron | 50.0% | |
| GGTGACAAGGTTGCAATGGA+AGG | - | chr3.4:97480580-97480599 | MS.gene064717:intron | 50.0% | |
| GTTTGGCTGGCGTATATTCG+AGG | + | chr3.4:97477868-97477887 | None:intergenic | 50.0% | |
| TCCTGGAAAATGGCACATGG+TGG | + | chr3.4:97478493-97478512 | None:intergenic | 50.0% | |
| TGGCTGTGTGCACAAAGTTC+AGG | + | chr3.4:97478223-97478242 | None:intergenic | 50.0% | |
| TTCCGGATTAATCGGTCCCT+GGG | - | chr3.4:97477709-97477728 | MS.gene064717:intron | 50.0% | |
| TTTCCGGATTAATCGGTCCC+TGG | - | chr3.4:97477708-97477727 | MS.gene064717:intron | 50.0% | |
| ! | AAATGGCACATGGTGGTGAC+TGG | + | chr3.4:97478486-97478505 | None:intergenic | 50.0% |
| ! | CTAGAAGTGTGCTCCTCTCT+AGG | - | chr3.4:97477592-97477611 | MS.gene064717:intron | 50.0% |
| ! | CTAGAGAGGAGCACACTTCT+AGG | + | chr3.4:97477594-97477613 | None:intergenic | 50.0% |
| ! | GTGCTATGGCTGTGCTATTG+CGG | - | chr3.4:97477979-97477998 | MS.gene064717:intron | 50.0% |
| !! | ACACAAGAACTGTTGGCTCC+TGG | + | chr3.4:97477634-97477653 | None:intergenic | 50.0% |
| !!! | ACCACCATGTGCCATTTTCC+AGG | - | chr3.4:97478489-97478508 | MS.gene064717:intron | 50.0% |
| !!! | GGACGGTGGAATTGGTTTTC+CGG | - | chr3.4:97477692-97477711 | MS.gene064717:intron | 50.0% |
| AGGCCAATGCCTGGAATGGT+TGG | - | chr3.4:97480848-97480867 | MS.gene064717:intron | 55.0% | |
| AGGTCAAAAATTCGGGGGGG+GGG | + | chr3.4:97480159-97480178 | None:intergenic | 55.0% | |
| AGTTACGGTGGAAGTAGCGG+TGG | - | chr3.4:97477133-97477152 | MS.gene064717:CDS | 55.0% | |
| ATGACCGTGGAACGCACATG+AGG | - | chr3.4:97480828-97480847 | MS.gene064717:intron | 55.0% | |
| CATGAGGCCAATGCCTGGAA+TGG | - | chr3.4:97480844-97480863 | MS.gene064717:intron | 55.0% | |
| CGGCTGAACATTGCAGCCTT+CGG | - | chr3.4:97477999-97478018 | MS.gene064717:intron | 55.0% | |
| CTATGCCTCAATTGGGACGG+TGG | - | chr3.4:97477678-97477697 | MS.gene064717:intron | 55.0% | |
| GGATTAATCGGTCCCTGGGT+TGG | - | chr3.4:97477713-97477732 | MS.gene064717:intron | 55.0% | |
| TGTGAAACTTCCACACCGCC+AGG | + | chr3.4:97480958-97480977 | None:intergenic | 55.0% | |
| TTGGCCTCATGTGCGTTCCA+CGG | + | chr3.4:97480835-97480854 | None:intergenic | 55.0% | |
| ! | AACTTGTGCCCTAAGGGCAC+AGG | + | chr3.4:97480442-97480461 | None:intergenic | 55.0% |
| !! | CAAGAACTGTTGGCTCCTGG+AGG | + | chr3.4:97477631-97477650 | None:intergenic | 55.0% |
| AAGAGATCGGGGAGAGCTGG+AGG | - | chr3.4:97481256-97481275 | MS.gene064717:intron | 60.0% | |
| ACGCACATGAGGCCAATGCC+TGG | - | chr3.4:97480839-97480858 | MS.gene064717:intron | 60.0% | |
| CAGAAGAGATCGGGGAGAGC+TGG | - | chr3.4:97481253-97481272 | MS.gene064717:intron | 60.0% | |
| CAGCTCTCCCCGATCTCTTC+TGG | + | chr3.4:97481255-97481274 | None:intergenic | 60.0% | |
| CGAAGGCAGAGAGATCGGTG+TGG | - | chr3.4:97477173-97477192 | MS.gene064717:CDS | 60.0% | |
| GGTCAAAAATTCGGGGGGGG+GGG | + | chr3.4:97480158-97480177 | None:intergenic | 60.0% | |
| GTCAAAAATTCGGGGGGGGG+GGG | + | chr3.4:97480157-97480176 | None:intergenic | 60.0% | |
| TCAAAAATTCGGGGGGGGGG+GGG | + | chr3.4:97480156-97480175 | None:intergenic | 60.0% | |
| AAAAATTCGGGGGGGGGGGG+GGG | + | chr3.4:97480154-97480173 | None:intergenic | 65.0% | |
| CAAAAATTCGGGGGGGGGGG+GGG | + | chr3.4:97480155-97480174 | None:intergenic | 65.0% | |
| GCAGCCTTCGGCCGCTCATT+TGG | - | chr3.4:97478011-97478030 | MS.gene064717:intron | 65.0% | |
| AAAATTCGGGGGGGGGGGGG+GGG | + | chr3.4:97480153-97480172 | None:intergenic | 70.0% | |
| AAATTCGGGGGGGGGGGGGG+GGG | + | chr3.4:97480152-97480171 | None:intergenic | 75.0% | |
| ! | AATTCGGGGGGGGGGGGGGG+GGG | + | chr3.4:97480151-97480170 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 97477118 | 97481609 | 97477118 | ID=MS.gene064717 |
| chr3.4 | mRNA | 97477118 | 97481609 | 97477118 | ID=MS.gene064717.t1;Parent=MS.gene064717 |
| chr3.4 | exon | 97481463 | 97481609 | 97481463 | ID=MS.gene064717.t1.exon1;Parent=MS.gene064717.t1 |
| chr3.4 | CDS | 97481463 | 97481609 | 97481463 | ID=cds.MS.gene064717.t1;Parent=MS.gene064717.t1 |
| chr3.4 | exon | 97479877 | 97479985 | 97479877 | ID=MS.gene064717.t1.exon2;Parent=MS.gene064717.t1 |
| chr3.4 | CDS | 97479877 | 97479985 | 97479877 | ID=cds.MS.gene064717.t1;Parent=MS.gene064717.t1 |
| chr3.4 | exon | 97478013 | 97478146 | 97478013 | ID=MS.gene064717.t1.exon3;Parent=MS.gene064717.t1 |
| chr3.4 | CDS | 97478013 | 97478146 | 97478013 | ID=cds.MS.gene064717.t1;Parent=MS.gene064717.t1 |
| chr3.4 | exon | 97477835 | 97477909 | 97477835 | ID=MS.gene064717.t1.exon4;Parent=MS.gene064717.t1 |
| chr3.4 | CDS | 97477835 | 97477909 | 97477835 | ID=cds.MS.gene064717.t1;Parent=MS.gene064717.t1 |
| chr3.4 | exon | 97477372 | 97477521 | 97477372 | ID=MS.gene064717.t1.exon5;Parent=MS.gene064717.t1 |
| chr3.4 | CDS | 97477372 | 97477521 | 97477372 | ID=cds.MS.gene064717.t1;Parent=MS.gene064717.t1 |
| chr3.4 | exon | 97477118 | 97477237 | 97477118 | ID=MS.gene064717.t1.exon6;Parent=MS.gene064717.t1 |
| chr3.4 | CDS | 97477118 | 97477237 | 97477118 | ID=cds.MS.gene064717.t1;Parent=MS.gene064717.t1 |
| Gene Sequence |
| Protein sequence |
