Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007960.t1 | XP_003601058.1 | 94.6 | 354 | 19 | 0 | 1 | 354 | 10 | 363 | 7.20E-183 | 649.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007960.t1 | Q9SUF1 | 57.3 | 354 | 140 | 4 | 1 | 351 | 8 | 353 | 1.3e-108 | 394.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007960.t1 | G7J316 | 94.6 | 354 | 19 | 0 | 1 | 354 | 10 | 363 | 5.2e-183 | 649.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene018547 | MS.gene007960 | PPI |
MS.gene061906 | MS.gene007960 | PPI |
MS.gene64506 | MS.gene007960 | PPI |
MS.gene007960 | MS.gene09837 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007960.t1 | MTR_3g072530 | 94.633 | 354 | 19 | 0 | 1 | 354 | 10 | 363 | 0.0 | 688 |
MS.gene007960.t1 | MTR_3g072530 | 83.624 | 287 | 13 | 1 | 1 | 253 | 10 | 296 | 5.59e-170 | 476 |
MS.gene007960.t1 | MTR_3g072560 | 63.920 | 352 | 121 | 4 | 2 | 353 | 15 | 360 | 1.27e-163 | 463 |
MS.gene007960.t1 | MTR_3g072500 | 50.142 | 351 | 166 | 3 | 3 | 351 | 18 | 361 | 8.63e-128 | 372 |
MS.gene007960.t1 | MTR_1g030580 | 51.541 | 357 | 159 | 4 | 3 | 354 | 14 | 361 | 9.40e-126 | 366 |
MS.gene007960.t1 | MTR_1g030600 | 52.890 | 346 | 159 | 3 | 7 | 350 | 20 | 363 | 5.15e-124 | 362 |
MS.gene007960.t1 | MTR_3g072520 | 52.355 | 361 | 153 | 5 | 3 | 351 | 7 | 360 | 4.64e-123 | 360 |
MS.gene007960.t1 | MTR_0096s0100 | 50.578 | 346 | 156 | 4 | 7 | 349 | 20 | 353 | 5.73e-118 | 346 |
MS.gene007960.t1 | MTR_1g068630 | 48.071 | 337 | 170 | 3 | 3 | 338 | 13 | 345 | 2.31e-117 | 344 |
MS.gene007960.t1 | MTR_7g100050 | 46.491 | 342 | 174 | 3 | 6 | 343 | 14 | 350 | 2.22e-115 | 340 |
MS.gene007960.t1 | MTR_8g041390 | 44.345 | 336 | 177 | 4 | 7 | 334 | 15 | 348 | 1.56e-104 | 313 |
MS.gene007960.t1 | MTR_3g012420 | 45.133 | 339 | 177 | 4 | 3 | 334 | 15 | 351 | 4.01e-103 | 309 |
MS.gene007960.t1 | MTR_3g072500 | 49.811 | 265 | 124 | 3 | 89 | 351 | 1 | 258 | 7.51e-92 | 276 |
MS.gene007960.t1 | MTR_3g072500 | 47.826 | 253 | 128 | 2 | 3 | 253 | 18 | 268 | 2.62e-84 | 257 |
MS.gene007960.t1 | MTR_1g074070 | 39.514 | 329 | 192 | 3 | 3 | 329 | 14 | 337 | 4.02e-82 | 254 |
MS.gene007960.t1 | MTR_1g074160 | 39.506 | 324 | 193 | 2 | 6 | 329 | 14 | 334 | 5.21e-82 | 253 |
MS.gene007960.t1 | MTR_1g051120 | 38.226 | 327 | 201 | 1 | 3 | 329 | 14 | 339 | 2.39e-79 | 247 |
MS.gene007960.t1 | MTR_1g074120 | 37.463 | 339 | 209 | 2 | 6 | 344 | 17 | 352 | 1.29e-78 | 245 |
MS.gene007960.t1 | MTR_3g112480 | 40.361 | 332 | 175 | 4 | 11 | 325 | 26 | 351 | 5.34e-77 | 242 |
MS.gene007960.t1 | MTR_1g074020 | 38.344 | 326 | 194 | 3 | 6 | 329 | 14 | 334 | 1.63e-76 | 239 |
MS.gene007960.t1 | MTR_1g070175 | 36.565 | 361 | 203 | 6 | 3 | 353 | 14 | 358 | 2.08e-76 | 239 |
MS.gene007960.t1 | MTR_1g073990 | 38.838 | 327 | 192 | 3 | 6 | 329 | 17 | 338 | 4.01e-76 | 239 |
MS.gene007960.t1 | MTR_1g023180 | 37.941 | 340 | 185 | 4 | 7 | 325 | 23 | 357 | 2.48e-75 | 238 |
MS.gene007960.t1 | MTR_3g095420 | 34.593 | 344 | 209 | 5 | 1 | 334 | 3 | 340 | 8.63e-72 | 228 |
MS.gene007960.t1 | MTR_6g081840 | 35.072 | 345 | 218 | 3 | 14 | 354 | 19 | 361 | 1.35e-70 | 224 |
MS.gene007960.t1 | MTR_3g095460 | 35.045 | 331 | 206 | 3 | 6 | 331 | 6 | 332 | 6.37e-70 | 222 |
MS.gene007960.t1 | MTR_3g095450 | 35.650 | 331 | 205 | 4 | 1 | 325 | 1 | 329 | 5.50e-67 | 215 |
MS.gene007960.t1 | MTR_4g094340 | 36.364 | 352 | 210 | 6 | 6 | 351 | 10 | 353 | 1.58e-66 | 214 |
MS.gene007960.t1 | MTR_4g094340 | 36.364 | 352 | 210 | 6 | 6 | 351 | 28 | 371 | 2.41e-66 | 214 |
MS.gene007960.t1 | MTR_6g036450 | 32.822 | 326 | 213 | 3 | 3 | 325 | 14 | 336 | 2.79e-66 | 213 |
MS.gene007960.t1 | MTR_2g016710 | 35.652 | 345 | 212 | 3 | 6 | 347 | 9 | 346 | 1.61e-65 | 211 |
MS.gene007960.t1 | MTR_8g092650 | 34.770 | 348 | 213 | 4 | 1 | 342 | 1 | 340 | 1.11e-64 | 209 |
MS.gene007960.t1 | MTR_5g021160 | 34.795 | 342 | 210 | 4 | 3 | 336 | 5 | 341 | 2.85e-64 | 208 |
MS.gene007960.t1 | MTR_3g072500 | 46.970 | 198 | 103 | 1 | 3 | 198 | 18 | 215 | 2.23e-63 | 201 |
MS.gene007960.t1 | MTR_1g038560 | 33.642 | 324 | 204 | 4 | 6 | 325 | 4 | 320 | 4.18e-62 | 202 |
MS.gene007960.t1 | MTR_7g111830 | 31.118 | 331 | 219 | 2 | 6 | 329 | 8 | 336 | 4.90e-59 | 195 |
MS.gene007960.t1 | MTR_2g007990 | 32.578 | 353 | 223 | 5 | 6 | 346 | 16 | 365 | 5.60e-59 | 195 |
MS.gene007960.t1 | MTR_3g095440 | 35.241 | 332 | 205 | 6 | 1 | 325 | 1 | 329 | 8.06e-59 | 194 |
MS.gene007960.t1 | MTR_3g112480 | 38.246 | 285 | 153 | 4 | 58 | 325 | 18 | 296 | 1.11e-58 | 193 |
MS.gene007960.t1 | MTR_1g114210 | 32.317 | 328 | 203 | 5 | 6 | 325 | 12 | 328 | 9.23e-58 | 191 |
MS.gene007960.t1 | MTR_2g027030 | 34.242 | 330 | 211 | 3 | 6 | 332 | 13 | 339 | 1.18e-57 | 191 |
MS.gene007960.t1 | MTR_3g090550 | 34.421 | 337 | 203 | 5 | 22 | 354 | 23 | 345 | 1.44e-57 | 190 |
MS.gene007960.t1 | MTR_4g129650 | 32.295 | 353 | 219 | 9 | 6 | 349 | 9 | 350 | 1.59e-56 | 188 |
MS.gene007960.t1 | MTR_2g007970 | 33.523 | 352 | 224 | 5 | 6 | 354 | 13 | 357 | 5.64e-56 | 187 |
MS.gene007960.t1 | MTR_1g074160 | 37.247 | 247 | 152 | 2 | 6 | 252 | 14 | 257 | 4.74e-55 | 181 |
MS.gene007960.t1 | MTR_2g007960 | 32.362 | 343 | 210 | 6 | 6 | 334 | 13 | 347 | 7.10e-55 | 185 |
MS.gene007960.t1 | MTR_2g016710 | 36.877 | 301 | 180 | 3 | 6 | 303 | 9 | 302 | 2.87e-54 | 181 |
MS.gene007960.t1 | MTR_8g006010 | 31.412 | 347 | 230 | 3 | 6 | 349 | 11 | 352 | 3.05e-54 | 183 |
MS.gene007960.t1 | MTR_1g052205 | 41.909 | 241 | 109 | 7 | 118 | 349 | 13 | 231 | 3.41e-54 | 179 |
MS.gene007960.t1 | MTR_4g094340 | 34.694 | 294 | 179 | 5 | 64 | 351 | 1 | 287 | 5.96e-54 | 179 |
MS.gene007960.t1 | MTR_5g034910 | 33.841 | 328 | 210 | 6 | 11 | 335 | 13 | 336 | 6.31e-54 | 181 |
MS.gene007960.t1 | MTR_8g006120 | 34.012 | 344 | 218 | 3 | 6 | 345 | 11 | 349 | 1.22e-53 | 181 |
MS.gene007960.t1 | MTR_2g102340 | 31.288 | 326 | 204 | 3 | 9 | 325 | 16 | 330 | 3.22e-53 | 180 |
MS.gene007960.t1 | MTR_4g106720 | 32.770 | 296 | 195 | 3 | 31 | 325 | 38 | 330 | 4.69e-53 | 179 |
MS.gene007960.t1 | MTR_2g065550 | 33.230 | 322 | 210 | 3 | 6 | 325 | 11 | 329 | 2.87e-52 | 177 |
MS.gene007960.t1 | MTR_2g007260 | 31.858 | 339 | 222 | 4 | 6 | 337 | 15 | 351 | 9.76e-52 | 177 |
MS.gene007960.t1 | MTR_5g034990 | 34.675 | 323 | 199 | 4 | 6 | 325 | 15 | 328 | 1.92e-51 | 174 |
MS.gene007960.t1 | MTR_1g030400 | 28.775 | 351 | 225 | 6 | 14 | 346 | 16 | 359 | 3.78e-50 | 172 |
MS.gene007960.t1 | MTR_5g034980 | 33.030 | 330 | 211 | 6 | 1 | 325 | 1 | 325 | 5.74e-50 | 171 |
MS.gene007960.t1 | MTR_4g094342 | 32.500 | 320 | 209 | 3 | 6 | 320 | 14 | 331 | 6.51e-50 | 171 |
MS.gene007960.t1 | MTR_8g092650 | 35.102 | 245 | 145 | 4 | 104 | 342 | 26 | 262 | 4.36e-48 | 163 |
MS.gene007960.t1 | MTR_1g014510 | 31.003 | 329 | 218 | 5 | 6 | 329 | 12 | 336 | 3.54e-47 | 166 |
MS.gene007960.t1 | MTR_5g034930 | 31.232 | 349 | 228 | 7 | 3 | 345 | 4 | 346 | 5.36e-47 | 163 |
MS.gene007960.t1 | MTR_5g021160 | 34.221 | 263 | 160 | 4 | 82 | 336 | 1 | 258 | 7.78e-47 | 160 |
MS.gene007960.t1 | MTR_8g006090 | 31.534 | 352 | 231 | 6 | 6 | 353 | 12 | 357 | 5.08e-46 | 160 |
MS.gene007960.t1 | MTR_5g025340 | 31.790 | 324 | 201 | 5 | 18 | 325 | 23 | 342 | 5.94e-46 | 161 |
MS.gene007960.t1 | MTR_0103s0090 | 34.551 | 301 | 182 | 5 | 31 | 325 | 37 | 328 | 1.06e-45 | 160 |
MS.gene007960.t1 | MTR_5g021160 | 34.766 | 256 | 157 | 3 | 3 | 253 | 5 | 255 | 1.46e-45 | 157 |
MS.gene007960.t1 | MTR_3g019050 | 29.630 | 324 | 210 | 4 | 19 | 337 | 32 | 342 | 2.01e-45 | 160 |
MS.gene007960.t1 | MTR_4g094360 | 28.307 | 378 | 232 | 6 | 6 | 354 | 15 | 382 | 4.06e-45 | 159 |
MS.gene007960.t1 | MTR_5g025290 | 31.231 | 333 | 209 | 5 | 18 | 334 | 24 | 352 | 1.12e-44 | 157 |
MS.gene007960.t1 | MTR_4g094362 | 29.012 | 324 | 226 | 2 | 4 | 325 | 13 | 334 | 2.09e-44 | 157 |
MS.gene007960.t1 | MTR_5g025290 | 31.231 | 333 | 209 | 5 | 18 | 334 | 52 | 380 | 2.54e-44 | 157 |
MS.gene007960.t1 | MTR_5g089390 | 29.360 | 344 | 222 | 6 | 13 | 353 | 22 | 347 | 1.20e-43 | 154 |
MS.gene007960.t1 | MTR_4g094352 | 31.657 | 338 | 211 | 7 | 6 | 330 | 13 | 343 | 2.56e-42 | 151 |
MS.gene007960.t1 | MTR_5g025370 | 31.627 | 332 | 207 | 6 | 11 | 325 | 16 | 344 | 2.76e-42 | 151 |
MS.gene007960.t1 | MTR_8g006050 | 33.106 | 293 | 178 | 4 | 36 | 325 | 25 | 302 | 2.86e-42 | 150 |
MS.gene007960.t1 | MTR_4g129650 | 33.755 | 237 | 144 | 6 | 104 | 336 | 3 | 230 | 5.34e-42 | 147 |
MS.gene007960.t1 | MTR_6g007743 | 30.960 | 323 | 203 | 7 | 22 | 337 | 30 | 339 | 1.01e-41 | 149 |
MS.gene007960.t1 | MTR_3g095440 | 34.363 | 259 | 160 | 6 | 1 | 252 | 1 | 256 | 1.13e-41 | 146 |
MS.gene007960.t1 | MTR_5g068790 | 27.988 | 343 | 230 | 5 | 19 | 354 | 32 | 364 | 1.57e-41 | 149 |
MS.gene007960.t1 | MTR_5g025400 | 30.606 | 330 | 209 | 5 | 13 | 325 | 19 | 345 | 2.06e-41 | 149 |
MS.gene007960.t1 | MTR_0103s0090 | 36.214 | 243 | 142 | 3 | 88 | 325 | 3 | 237 | 4.11e-41 | 145 |
MS.gene007960.t1 | MTR_3g112480 | 36.957 | 230 | 122 | 4 | 113 | 325 | 1 | 224 | 6.16e-41 | 145 |
MS.gene007960.t1 | MTR_5g034970 | 33.028 | 327 | 190 | 7 | 11 | 330 | 13 | 317 | 1.53e-40 | 145 |
MS.gene007960.t1 | MTR_4g094340 | 36.694 | 248 | 145 | 4 | 6 | 247 | 10 | 251 | 5.36e-40 | 142 |
MS.gene007960.t1 | MTR_5g069040 | 27.273 | 352 | 235 | 4 | 19 | 353 | 32 | 379 | 7.24e-40 | 145 |
MS.gene007960.t1 | MTR_4g094340 | 36.694 | 248 | 145 | 4 | 6 | 247 | 28 | 269 | 7.59e-40 | 142 |
MS.gene007960.t1 | MTR_5g025330 | 29.429 | 333 | 207 | 4 | 13 | 325 | 17 | 341 | 1.44e-39 | 147 |
MS.gene007960.t1 | MTR_8g072350 | 29.254 | 335 | 216 | 6 | 17 | 334 | 20 | 350 | 4.19e-39 | 143 |
MS.gene007960.t1 | MTR_6g007747 | 32.278 | 316 | 206 | 5 | 22 | 337 | 30 | 337 | 7.22e-39 | 142 |
MS.gene007960.t1 | MTR_6g007750 | 31.546 | 317 | 205 | 6 | 26 | 337 | 33 | 342 | 2.00e-38 | 140 |
MS.gene007960.t1 | MTR_8g006090 | 32.727 | 275 | 176 | 5 | 82 | 353 | 9 | 277 | 6.08e-38 | 137 |
MS.gene007960.t1 | MTR_1g051120 | 33.838 | 198 | 131 | 0 | 3 | 200 | 14 | 211 | 1.29e-37 | 136 |
MS.gene007960.t1 | MTR_4g094360 | 29.066 | 289 | 166 | 6 | 95 | 354 | 57 | 335 | 1.82e-37 | 138 |
MS.gene007960.t1 | MTR_1g051120 | 34.184 | 196 | 129 | 0 | 3 | 198 | 14 | 209 | 1.86e-37 | 134 |
MS.gene007960.t1 | MTR_6g007760 | 28.808 | 302 | 209 | 5 | 6 | 305 | 12 | 309 | 3.96e-36 | 133 |
MS.gene007960.t1 | MTR_8g006090 | 31.229 | 301 | 200 | 4 | 6 | 303 | 12 | 308 | 2.41e-35 | 131 |
MS.gene007960.t1 | MTR_4g094360 | 28.155 | 309 | 201 | 4 | 6 | 303 | 15 | 313 | 6.77e-34 | 127 |
MS.gene007960.t1 | MTR_6g007753 | 30.420 | 286 | 191 | 3 | 55 | 337 | 343 | 623 | 1.41e-33 | 131 |
MS.gene007960.t1 | MTR_6g007753 | 29.279 | 222 | 152 | 2 | 116 | 337 | 83 | 299 | 2.47e-23 | 101 |
MS.gene007960.t1 | MTR_6g007740 | 29.377 | 337 | 223 | 7 | 6 | 337 | 13 | 339 | 3.90e-33 | 128 |
MS.gene007960.t1 | MTR_6g007757 | 32.573 | 307 | 196 | 6 | 22 | 325 | 30 | 328 | 7.07e-33 | 125 |
MS.gene007960.t1 | MTR_5g034980 | 31.229 | 301 | 179 | 7 | 1 | 278 | 1 | 296 | 1.49e-31 | 121 |
MS.gene007960.t1 | MTR_1g068720 | 41.304 | 138 | 78 | 3 | 196 | 331 | 93 | 229 | 5.71e-30 | 115 |
MS.gene007960.t1 | MTR_4g100840 | 28.483 | 323 | 218 | 8 | 11 | 325 | 20 | 337 | 2.92e-29 | 115 |
MS.gene007960.t1 | MTR_4g094340 | 36.139 | 202 | 119 | 3 | 6 | 201 | 28 | 225 | 7.82e-29 | 111 |
MS.gene007960.t1 | MTR_2g102340 | 27.559 | 254 | 164 | 3 | 9 | 253 | 42 | 284 | 4.93e-28 | 112 |
MS.gene007960.t1 | MTR_5g012650 | 28.000 | 325 | 222 | 7 | 11 | 329 | 14 | 332 | 8.37e-28 | 112 |
MS.gene007960.t1 | MTR_8g006090 | 32.314 | 229 | 150 | 3 | 6 | 231 | 12 | 238 | 3.81e-24 | 100 |
MS.gene007960.t1 | MTR_8g076800 | 36.765 | 136 | 70 | 4 | 160 | 288 | 137 | 263 | 8.75e-22 | 94.0 |
MS.gene007960.t1 | MTR_4g094342 | 34.416 | 154 | 101 | 0 | 6 | 159 | 14 | 167 | 1.47e-20 | 90.1 |
MS.gene007960.t1 | MTR_6g007757 | 29.694 | 229 | 150 | 6 | 22 | 247 | 30 | 250 | 4.17e-20 | 89.4 |
MS.gene007960.t1 | MTR_6g007470 | 49.398 | 83 | 40 | 1 | 194 | 276 | 104 | 184 | 9.03e-20 | 87.0 |
MS.gene007960.t1 | MTR_1g014790 | 36.290 | 124 | 75 | 2 | 78 | 198 | 36 | 158 | 3.01e-17 | 79.7 |
MS.gene007960.t1 | MTR_8g006090 | 34.868 | 152 | 95 | 2 | 82 | 231 | 9 | 158 | 1.99e-16 | 77.8 |
MS.gene007960.t1 | MTR_4g094348 | 30.952 | 126 | 78 | 2 | 90 | 206 | 7 | 132 | 3.53e-12 | 64.7 |
MS.gene007960.t1 | MTR_3g093450 | 25.000 | 196 | 96 | 6 | 138 | 324 | 25 | 178 | 2.34e-11 | 62.8 |
MS.gene007960.t1 | MTR_1g092700 | 46.296 | 54 | 26 | 1 | 272 | 325 | 4 | 54 | 8.00e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007960.t1 | AT4G08290 | 57.465 | 355 | 140 | 5 | 1 | 352 | 8 | 354 | 1.09e-146 | 419 |
MS.gene007960.t1 | AT1G44800 | 50.282 | 354 | 162 | 5 | 1 | 351 | 6 | 348 | 3.88e-123 | 359 |
MS.gene007960.t1 | AT4G08300 | 49.861 | 359 | 161 | 4 | 1 | 353 | 6 | 351 | 1.89e-122 | 357 |
MS.gene007960.t1 | AT1G21890 | 49.860 | 357 | 162 | 4 | 6 | 347 | 11 | 365 | 4.82e-121 | 355 |
MS.gene007960.t1 | AT2G37460 | 46.957 | 345 | 178 | 3 | 1 | 344 | 10 | 350 | 1.57e-115 | 340 |
MS.gene007960.t1 | AT2G39510 | 44.000 | 350 | 184 | 4 | 6 | 354 | 8 | 346 | 5.24e-107 | 318 |
MS.gene007960.t1 | AT1G21890 | 50.163 | 307 | 142 | 2 | 6 | 303 | 11 | 315 | 1.34e-106 | 316 |
MS.gene007960.t1 | AT4G08290 | 59.766 | 256 | 97 | 4 | 1 | 253 | 8 | 260 | 1.82e-106 | 313 |
MS.gene007960.t1 | AT5G07050 | 44.545 | 330 | 173 | 3 | 4 | 325 | 16 | 343 | 8.96e-102 | 306 |
MS.gene007960.t1 | AT2G40900 | 43.787 | 338 | 183 | 2 | 4 | 341 | 9 | 339 | 7.60e-101 | 303 |
MS.gene007960.t1 | AT2G37450 | 44.380 | 347 | 167 | 4 | 1 | 346 | 4 | 325 | 4.49e-93 | 281 |
MS.gene007960.t1 | AT3G56620 | 43.260 | 319 | 175 | 2 | 4 | 322 | 9 | 321 | 1.41e-91 | 279 |
MS.gene007960.t1 | AT5G13670 | 36.620 | 355 | 219 | 5 | 3 | 353 | 5 | 357 | 2.96e-82 | 255 |
MS.gene007960.t1 | AT2G37450 | 47.471 | 257 | 130 | 3 | 91 | 346 | 1 | 253 | 4.32e-76 | 235 |
MS.gene007960.t1 | AT1G75500 | 38.037 | 326 | 193 | 3 | 7 | 325 | 21 | 344 | 4.56e-74 | 234 |
MS.gene007960.t1 | AT1G75500 | 38.037 | 326 | 193 | 3 | 7 | 325 | 21 | 344 | 4.56e-74 | 234 |
MS.gene007960.t1 | AT3G18200 | 35.429 | 350 | 216 | 6 | 8 | 353 | 37 | 380 | 2.84e-71 | 227 |
MS.gene007960.t1 | AT5G64700 | 34.226 | 336 | 212 | 2 | 1 | 329 | 3 | 336 | 2.97e-65 | 211 |
MS.gene007960.t1 | AT3G53210 | 37.309 | 327 | 192 | 4 | 3 | 323 | 7 | 326 | 7.20e-65 | 210 |
MS.gene007960.t1 | AT3G30340 | 35.161 | 310 | 196 | 4 | 28 | 335 | 33 | 339 | 7.23e-63 | 205 |
MS.gene007960.t1 | AT2G37450 | 45.217 | 230 | 121 | 3 | 118 | 346 | 61 | 286 | 1.04e-61 | 199 |
MS.gene007960.t1 | AT1G09380 | 32.308 | 325 | 206 | 4 | 6 | 322 | 8 | 326 | 7.44e-58 | 192 |
MS.gene007960.t1 | AT4G30420 | 34.365 | 323 | 207 | 2 | 6 | 325 | 9 | 329 | 1.61e-57 | 191 |
MS.gene007960.t1 | AT4G30420 | 34.810 | 316 | 201 | 2 | 13 | 325 | 6 | 319 | 1.93e-57 | 191 |
MS.gene007960.t1 | AT1G43650 | 34.921 | 315 | 200 | 2 | 11 | 325 | 12 | 321 | 1.61e-56 | 187 |
MS.gene007960.t1 | AT1G25270 | 34.104 | 346 | 212 | 7 | 11 | 349 | 8 | 344 | 1.91e-54 | 182 |
MS.gene007960.t1 | AT1G68170 | 34.286 | 350 | 222 | 3 | 11 | 354 | 8 | 355 | 1.21e-52 | 178 |
MS.gene007960.t1 | AT1G68170 | 34.286 | 350 | 222 | 3 | 11 | 354 | 18 | 365 | 1.68e-52 | 178 |
MS.gene007960.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 3.12e-51 | 174 |
MS.gene007960.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 3.12e-51 | 174 |
MS.gene007960.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 3.12e-51 | 174 |
MS.gene007960.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 3.12e-51 | 174 |
MS.gene007960.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 3.12e-51 | 174 |
MS.gene007960.t1 | AT1G01070 | 32.530 | 332 | 216 | 4 | 3 | 330 | 13 | 340 | 2.59e-50 | 172 |
MS.gene007960.t1 | AT3G53210 | 39.592 | 245 | 141 | 3 | 82 | 323 | 29 | 269 | 1.69e-48 | 166 |
MS.gene007960.t1 | AT5G40230 | 32.081 | 346 | 212 | 6 | 6 | 336 | 21 | 358 | 2.98e-48 | 167 |
MS.gene007960.t1 | AT4G01440 | 27.457 | 346 | 236 | 2 | 3 | 348 | 7 | 337 | 4.79e-48 | 166 |
MS.gene007960.t1 | AT3G53210 | 37.354 | 257 | 148 | 4 | 3 | 253 | 7 | 256 | 7.63e-48 | 162 |
MS.gene007960.t1 | AT1G11450 | 31.420 | 331 | 219 | 4 | 6 | 333 | 16 | 341 | 5.49e-47 | 163 |
MS.gene007960.t1 | AT4G01430 | 33.115 | 305 | 194 | 7 | 27 | 325 | 30 | 330 | 1.01e-45 | 160 |
MS.gene007960.t1 | AT5G40240 | 31.003 | 329 | 220 | 4 | 6 | 330 | 20 | 345 | 6.07e-45 | 158 |
MS.gene007960.t1 | AT5G40240 | 31.003 | 329 | 220 | 4 | 6 | 330 | 20 | 345 | 6.07e-45 | 158 |
MS.gene007960.t1 | AT5G40240 | 31.003 | 329 | 220 | 4 | 6 | 330 | 34 | 359 | 1.04e-44 | 158 |
MS.gene007960.t1 | AT3G28130 | 30.818 | 318 | 206 | 7 | 26 | 333 | 33 | 346 | 2.88e-44 | 156 |
MS.gene007960.t1 | AT1G11450 | 32.997 | 297 | 191 | 4 | 40 | 333 | 6 | 297 | 4.43e-44 | 154 |
MS.gene007960.t1 | AT3G28130 | 32.677 | 254 | 161 | 4 | 88 | 333 | 9 | 260 | 1.71e-43 | 151 |
MS.gene007960.t1 | AT3G28130 | 32.677 | 254 | 161 | 4 | 88 | 333 | 9 | 260 | 1.71e-43 | 151 |
MS.gene007960.t1 | AT1G11460 | 31.902 | 326 | 209 | 6 | 6 | 325 | 16 | 334 | 2.69e-43 | 153 |
MS.gene007960.t1 | AT3G18200 | 32.812 | 256 | 162 | 6 | 102 | 353 | 1 | 250 | 4.96e-43 | 150 |
MS.gene007960.t1 | AT1G11450 | 32.765 | 293 | 189 | 4 | 44 | 333 | 3 | 290 | 6.93e-43 | 151 |
MS.gene007960.t1 | AT1G01070 | 33.099 | 284 | 182 | 4 | 51 | 330 | 14 | 293 | 9.06e-43 | 151 |
MS.gene007960.t1 | AT3G28080 | 32.836 | 268 | 171 | 5 | 62 | 325 | 71 | 333 | 1.00e-42 | 152 |
MS.gene007960.t1 | AT3G28080 | 33.473 | 239 | 155 | 3 | 89 | 325 | 8 | 244 | 1.04e-42 | 149 |
MS.gene007960.t1 | AT3G28080 | 33.473 | 239 | 155 | 3 | 89 | 325 | 8 | 244 | 1.04e-42 | 149 |
MS.gene007960.t1 | AT3G28080 | 33.473 | 239 | 155 | 3 | 89 | 325 | 8 | 244 | 1.04e-42 | 149 |
MS.gene007960.t1 | AT3G28080 | 33.473 | 239 | 155 | 3 | 89 | 325 | 8 | 244 | 1.04e-42 | 149 |
MS.gene007960.t1 | AT4G01440 | 27.907 | 301 | 215 | 1 | 3 | 303 | 7 | 305 | 1.82e-42 | 150 |
MS.gene007960.t1 | AT3G28070 | 31.111 | 270 | 168 | 5 | 88 | 347 | 7 | 268 | 2.47e-42 | 148 |
MS.gene007960.t1 | AT3G28080 | 33.473 | 239 | 155 | 3 | 89 | 325 | 89 | 325 | 8.08e-42 | 149 |
MS.gene007960.t1 | AT3G28100 | 30.408 | 319 | 214 | 6 | 11 | 325 | 19 | 333 | 1.21e-41 | 149 |
MS.gene007960.t1 | AT3G28070 | 31.111 | 270 | 168 | 5 | 88 | 347 | 99 | 360 | 1.75e-41 | 149 |
MS.gene007960.t1 | AT5G64700 | 32.046 | 259 | 167 | 2 | 1 | 252 | 3 | 259 | 2.34e-41 | 145 |
MS.gene007960.t1 | AT3G45870 | 29.538 | 325 | 215 | 3 | 7 | 320 | 13 | 334 | 6.65e-41 | 148 |
MS.gene007960.t1 | AT1G70260 | 29.747 | 316 | 204 | 4 | 22 | 325 | 28 | 337 | 1.32e-40 | 147 |
MS.gene007960.t1 | AT3G28050 | 32.353 | 306 | 197 | 6 | 22 | 325 | 29 | 326 | 1.80e-40 | 146 |
MS.gene007960.t1 | AT3G30340 | 32.365 | 241 | 157 | 3 | 28 | 267 | 33 | 268 | 1.87e-39 | 141 |
MS.gene007960.t1 | AT5G45370 | 28.571 | 315 | 209 | 4 | 18 | 330 | 32 | 332 | 2.22e-39 | 143 |
MS.gene007960.t1 | AT5G40210 | 28.660 | 321 | 207 | 8 | 11 | 329 | 18 | 318 | 3.10e-39 | 142 |
MS.gene007960.t1 | AT4G15540 | 28.655 | 342 | 230 | 4 | 6 | 346 | 17 | 345 | 6.14e-39 | 142 |
MS.gene007960.t1 | AT4G15540 | 28.655 | 342 | 230 | 4 | 6 | 346 | 17 | 345 | 6.14e-39 | 142 |
MS.gene007960.t1 | AT5G45370 | 27.928 | 333 | 212 | 5 | 18 | 330 | 32 | 356 | 1.97e-38 | 141 |
MS.gene007960.t1 | AT5G45370 | 27.928 | 333 | 212 | 5 | 18 | 330 | 32 | 356 | 1.97e-38 | 141 |
MS.gene007960.t1 | AT4G01430 | 32.862 | 283 | 180 | 7 | 27 | 303 | 30 | 308 | 2.26e-38 | 139 |
MS.gene007960.t1 | AT4G19185 | 28.324 | 346 | 222 | 4 | 18 | 344 | 33 | 371 | 6.34e-38 | 140 |
MS.gene007960.t1 | AT1G11450 | 30.565 | 301 | 201 | 4 | 6 | 303 | 16 | 311 | 1.87e-37 | 137 |
MS.gene007960.t1 | AT4G01450 | 30.872 | 298 | 200 | 3 | 28 | 325 | 32 | 323 | 4.76e-37 | 137 |
MS.gene007960.t1 | AT4G01450 | 32.906 | 234 | 151 | 3 | 28 | 261 | 32 | 259 | 7.74e-37 | 136 |
MS.gene007960.t1 | AT4G01450 | 35.377 | 212 | 131 | 3 | 28 | 239 | 32 | 237 | 7.91e-37 | 134 |
MS.gene007960.t1 | AT1G11450 | 32.806 | 253 | 162 | 4 | 84 | 333 | 2 | 249 | 9.69e-37 | 134 |
MS.gene007960.t1 | AT5G47470 | 28.483 | 323 | 218 | 4 | 11 | 329 | 35 | 348 | 1.14e-35 | 133 |
MS.gene007960.t1 | AT5G47470 | 28.483 | 323 | 218 | 4 | 11 | 329 | 63 | 376 | 1.69e-35 | 133 |
MS.gene007960.t1 | AT4G01440 | 29.870 | 231 | 162 | 0 | 3 | 233 | 7 | 237 | 1.96e-35 | 130 |
MS.gene007960.t1 | AT5G47470 | 28.483 | 323 | 218 | 4 | 11 | 329 | 63 | 376 | 2.15e-35 | 133 |
MS.gene007960.t1 | AT3G45870 | 27.922 | 308 | 208 | 3 | 7 | 303 | 13 | 317 | 1.16e-33 | 127 |
MS.gene007960.t1 | AT1G60050 | 27.401 | 354 | 245 | 5 | 6 | 349 | 13 | 364 | 1.28e-33 | 128 |
MS.gene007960.t1 | AT4G01450 | 35.176 | 199 | 125 | 2 | 28 | 226 | 32 | 226 | 1.61e-32 | 122 |
MS.gene007960.t1 | AT3G28070 | 32.110 | 218 | 144 | 3 | 88 | 303 | 99 | 314 | 3.21e-32 | 123 |
MS.gene007960.t1 | AT4G24980 | 29.052 | 327 | 160 | 7 | 27 | 352 | 8 | 263 | 3.53e-32 | 122 |
MS.gene007960.t1 | AT1G43650 | 32.677 | 254 | 165 | 3 | 11 | 263 | 12 | 260 | 4.41e-31 | 119 |
MS.gene007960.t1 | AT3G45870 | 30.126 | 239 | 156 | 1 | 7 | 234 | 13 | 251 | 1.81e-30 | 117 |
MS.gene007960.t1 | AT3G28130 | 30.493 | 223 | 145 | 4 | 119 | 333 | 1 | 221 | 2.28e-30 | 115 |
MS.gene007960.t1 | AT3G28080 | 30.622 | 209 | 141 | 3 | 119 | 325 | 1 | 207 | 8.40e-30 | 114 |
MS.gene007960.t1 | AT3G28070 | 28.870 | 239 | 152 | 5 | 119 | 347 | 1 | 231 | 1.90e-29 | 113 |
MS.gene007960.t1 | AT4G01440 | 25.620 | 242 | 165 | 2 | 107 | 348 | 3 | 229 | 3.16e-29 | 113 |
MS.gene007960.t1 | AT4G01440 | 25.620 | 242 | 165 | 2 | 107 | 348 | 3 | 229 | 3.16e-29 | 113 |
MS.gene007960.t1 | AT4G19185 | 27.046 | 281 | 179 | 4 | 83 | 344 | 20 | 293 | 1.82e-27 | 110 |
MS.gene007960.t1 | AT3G28130 | 30.973 | 226 | 149 | 5 | 26 | 247 | 33 | 255 | 1.48e-26 | 106 |
MS.gene007960.t1 | AT3G28080 | 29.851 | 268 | 125 | 7 | 62 | 325 | 71 | 279 | 3.81e-25 | 103 |
MS.gene007960.t1 | AT3G28080 | 30.126 | 239 | 109 | 5 | 89 | 325 | 8 | 190 | 6.02e-25 | 101 |
MS.gene007960.t1 | AT3G28100 | 29.876 | 241 | 162 | 5 | 11 | 247 | 19 | 256 | 2.02e-24 | 100 |
MS.gene007960.t1 | AT4G16620 | 25.072 | 347 | 250 | 4 | 1 | 346 | 7 | 344 | 3.07e-24 | 102 |
MS.gene007960.t1 | AT5G45370 | 26.848 | 257 | 160 | 5 | 89 | 325 | 1 | 249 | 9.21e-24 | 99.4 |
MS.gene007960.t1 | AT5G45370 | 26.848 | 257 | 160 | 5 | 89 | 325 | 1 | 249 | 9.21e-24 | 99.4 |
MS.gene007960.t1 | AT3G45870 | 29.461 | 241 | 153 | 5 | 91 | 320 | 25 | 259 | 7.72e-21 | 92.0 |
MS.gene007960.t1 | AT4G01430 | 29.442 | 197 | 130 | 6 | 134 | 325 | 1 | 193 | 2.71e-18 | 83.2 |
MS.gene007960.t1 | AT3G28130 | 35.036 | 137 | 85 | 3 | 26 | 160 | 33 | 167 | 3.14e-18 | 82.8 |
MS.gene007960.t1 | AT4G16620 | 26.953 | 256 | 178 | 3 | 91 | 346 | 1 | 247 | 9.64e-18 | 82.4 |
MS.gene007960.t1 | AT4G16620 | 26.953 | 256 | 178 | 3 | 91 | 346 | 1 | 247 | 9.64e-18 | 82.4 |
MS.gene007960.t1 | AT3G28100 | 30.729 | 192 | 127 | 4 | 11 | 198 | 19 | 208 | 2.31e-17 | 81.3 |
MS.gene007960.t1 | AT4G16620 | 27.014 | 211 | 151 | 3 | 14 | 223 | 20 | 228 | 2.45e-15 | 75.5 |
MS.gene007960.t1 | AT5G45370 | 25.108 | 231 | 145 | 5 | 120 | 330 | 74 | 296 | 2.76e-15 | 76.3 |
MS.gene007960.t1 | AT3G45870 | 28.431 | 204 | 129 | 5 | 91 | 283 | 25 | 222 | 3.04e-14 | 72.0 |
MS.gene007960.t1 | AT3G45870 | 28.431 | 204 | 129 | 5 | 91 | 283 | 25 | 222 | 3.04e-14 | 72.0 |
MS.gene007960.t1 | AT3G45870 | 26.882 | 186 | 122 | 3 | 146 | 320 | 1 | 183 | 2.81e-12 | 66.2 |
MS.gene007960.t1 | AT3G45870 | 30.323 | 155 | 94 | 3 | 91 | 234 | 25 | 176 | 4.30e-11 | 62.0 |
Find 89 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTCTTGAGGTTTGGGCTAT+TGG | 0.175402 | 3.3:-62876350 | MS.gene007960:CDS |
TCAACCTTAATATGCTTAAT+TGG | 0.206118 | 3.3:-62876419 | MS.gene007960:CDS |
GATCAAGGATTTACTTTCTT+GGG | 0.226580 | 3.3:-62877055 | MS.gene007960:CDS |
ATGATCATCACTTGTGCTTT+AGG | 0.227026 | 3.3:-62875340 | MS.gene007960:CDS |
GTCACTCTGGTCTTGAGGTT+TGG | 0.255637 | 3.3:-62876358 | MS.gene007960:CDS |
GCACTTCAATTTGGGTTTGC+AGG | 0.256620 | 3.3:-62879246 | MS.gene007960:CDS |
TACAACTTTGCAGGAAAATT+AGG | 0.260312 | 3.3:-62878685 | MS.gene007960:intron |
GGCACCAATTAAGCATATTA+AGG | 0.276307 | 3.3:+62876415 | None:intergenic |
GGTTGGGACTTTAGACTATA+TGG | 0.302017 | 3.3:-62876329 | MS.gene007960:CDS |
TTAACGGTGGCACTTCAATT+TGG | 0.325006 | 3.3:-62879255 | MS.gene007960:CDS |
GGGACATTAGTAACCTTTGC+AGG | 0.325264 | 3.3:-62876754 | MS.gene007960:CDS |
AAGACACCCATTGTCATCTT+TGG | 0.325604 | 3.3:+62878662 | None:intergenic |
TCACTCTGGTCTTGAGGTTT+GGG | 0.326320 | 3.3:-62876357 | MS.gene007960:CDS |
TAGACATCAGATGAAGTAAT+TGG | 0.329648 | 3.3:+62874929 | None:intergenic |
TTTGTTGATTACAGTATCAT+TGG | 0.334370 | 3.3:-62875073 | MS.gene007960:intron |
TTGAGGTTTGGGCTATTGGT+TGG | 0.342298 | 3.3:-62876346 | MS.gene007960:CDS |
AGATCAAGGATTTACTTTCT+TGG | 0.355086 | 3.3:-62877056 | MS.gene007960:CDS |
TCAGTTTGCTTCATTGCAAC+TGG | 0.357064 | 3.3:+62874962 | None:intergenic |
ATAGACCCACTGCAATAATC+AGG | 0.361308 | 3.3:+62875047 | None:intergenic |
TAACGGTGGCACTTCAATTT+GGG | 0.361637 | 3.3:-62879254 | MS.gene007960:CDS |
TGAGGTTTGGGCTATTGGTT+GGG | 0.366132 | 3.3:-62876345 | MS.gene007960:CDS |
AGTGGAGTTGCTCTGCAAAA+AGG | 0.371654 | 3.3:+62875311 | None:intergenic |
ATTTGGTTACCTGAAAATTA+CGG | 0.378910 | 3.3:+62876961 | None:intergenic |
TTAAATGCTGTATAAAATAC+TGG | 0.379245 | 3.3:+62875373 | None:intergenic |
AGGAACACTCTTTCTAATGA+TGG | 0.410004 | 3.3:-62876620 | MS.gene007960:CDS |
ACTCTCAAACATTGGGTCTC+AGG | 0.410947 | 3.3:-62876640 | MS.gene007960:CDS |
GGTAATAAAATGATTAAGGC+AGG | 0.414390 | 3.3:-62879288 | None:intergenic |
GGGTCTATATTCTGTGGTGT+GGG | 0.434106 | 3.3:-62875032 | MS.gene007960:CDS |
GGCAGGGCCTTATGTGTTAA+CGG | 0.445853 | 3.3:-62879271 | MS.gene007960:CDS |
CGAAGCATAGCAAAAGTGAT+TGG | 0.452310 | 3.3:-62876775 | MS.gene007960:CDS |
TTTAGGCCAGTGATAGATCA+AGG | 0.452691 | 3.3:-62877070 | MS.gene007960:intron |
ACACGCAAACTCTCAAACAT+TGG | 0.463592 | 3.3:-62876648 | MS.gene007960:CDS |
GGGTGTCTTTGTGCGGATAA+TGG | 0.463680 | 3.3:-62878648 | MS.gene007960:CDS |
GTTGATAGTGACATTTCTGC+TGG | 0.464929 | 3.3:+62876437 | None:intergenic |
TAATGATGGGTTGTGTGGCT+TGG | 0.467472 | 3.3:-62876606 | MS.gene007960:CDS |
TGGGTCTATATTCTGTGGTG+TGG | 0.473719 | 3.3:-62875033 | MS.gene007960:CDS |
TGCTTCATTGCAACTGGTGA+TGG | 0.475348 | 3.3:+62874968 | None:intergenic |
CACGCAAACTCTCAAACATT+GGG | 0.482922 | 3.3:-62876647 | MS.gene007960:CDS |
ATTCATTCCCATGTTGAGAC+TGG | 0.492222 | 3.3:+62879203 | None:intergenic |
ATTAGGCCAAAGATGACAAT+GGG | 0.506829 | 3.3:-62878668 | MS.gene007960:CDS |
CTCCATGGCCAGTCTCAACA+TGG | 0.517219 | 3.3:-62879211 | MS.gene007960:CDS |
TTTCAGGGAATAATTACCTC+AGG | 0.519170 | 3.3:-62875439 | MS.gene007960:intron |
GGAACACTCTTTCTAATGAT+GGG | 0.519597 | 3.3:-62876619 | MS.gene007960:CDS |
TGGAGCCCTGATTATTGCAG+TGG | 0.520137 | 3.3:-62875053 | MS.gene007960:CDS |
GAAGCATAGCAAAAGTGATT+GGG | 0.521865 | 3.3:-62876774 | MS.gene007960:CDS |
GTAAATCCTTGATCTATCAC+TGG | 0.527191 | 3.3:+62877064 | None:intergenic |
ACAAGTGATGATCATACAAA+GGG | 0.529299 | 3.3:+62875348 | None:intergenic |
TCCCATGTTGAGACTGGCCA+TGG | 0.532428 | 3.3:+62879209 | None:intergenic |
TTCATTGCTGAGCGTCACTC+TGG | 0.533655 | 3.3:-62876371 | MS.gene007960:CDS |
CTTTCTAATGATGGGTTGTG+TGG | 0.538049 | 3.3:-62876611 | MS.gene007960:CDS |
AGTGCCACCGTTAACACATA+AGG | 0.539701 | 3.3:+62879264 | None:intergenic |
GAATAGAAAAGGTGAATTTG+TGG | 0.542285 | 3.3:+62876703 | None:intergenic |
ATCAAGGATTTACTTTCTTG+GGG | 0.542739 | 3.3:-62877054 | MS.gene007960:CDS |
AGCGTATTATGTGCAAGGAT+TGG | 0.543440 | 3.3:-62875413 | MS.gene007960:CDS |
AATAGAAAAGGTGAATTTGT+GGG | 0.544421 | 3.3:+62876704 | None:intergenic |
CTTGGGGATGCAATATACAT+CGG | 0.549174 | 3.3:-62877038 | MS.gene007960:CDS |
TGCCACCACACTAGTTTGCA+TGG | 0.549697 | 3.3:+62876394 | None:intergenic |
TGAGCGTCACTCTGGTCTTG+AGG | 0.557312 | 3.3:-62876363 | MS.gene007960:CDS |
CAGAGCAACTCCACTTGGGA+AGG | 0.561936 | 3.3:-62875303 | MS.gene007960:intron |
GGACATTAGTAACCTTTGCA+GGG | 0.563644 | 3.3:-62876753 | MS.gene007960:CDS |
TTCATTGCAACTGGTGATGG+TGG | 0.573404 | 3.3:+62874971 | None:intergenic |
GGAGCCCTGATTATTGCAGT+GGG | 0.579920 | 3.3:-62875052 | MS.gene007960:CDS |
GTAATAAAATGATTAAGGCA+GGG | 0.587073 | 3.3:-62879287 | None:intergenic |
GGTCTATATTCTGTGGTGTG+GGG | 0.589276 | 3.3:-62875031 | MS.gene007960:CDS |
GCAACTGGTGATGGTGGCAT+AGG | 0.594061 | 3.3:+62874977 | None:intergenic |
CACAAGTGATGATCATACAA+AGG | 0.594526 | 3.3:+62875347 | None:intergenic |
TTTGCAGAGCAACTCCACTT+GGG | 0.594536 | 3.3:-62875307 | MS.gene007960:CDS |
GGAATAGCGTATTATGTGCA+AGG | 0.597413 | 3.3:-62875418 | MS.gene007960:CDS |
AATTAGGCCAAAGATGACAA+TGG | 0.598592 | 3.3:-62878669 | MS.gene007960:CDS |
CATCATCAATGCCCCTGCAA+AGG | 0.600667 | 3.3:+62876741 | None:intergenic |
GAAAATTACGGCTAGCACAA+AGG | 0.618070 | 3.3:+62876973 | None:intergenic |
TTAGAAGTTACCTTCCCAAG+TGG | 0.619720 | 3.3:+62875293 | None:intergenic |
TAGACCCACTGCAATAATCA+GGG | 0.620855 | 3.3:+62875048 | None:intergenic |
TGCAGTGGGTCTATATTCTG+TGG | 0.631521 | 3.3:-62875038 | MS.gene007960:CDS |
GGATTGGTATTTCAAAGCAG+AGG | 0.631848 | 3.3:-62875397 | MS.gene007960:CDS |
AGGAGCATACATATTCTCCA+TGG | 0.632777 | 3.3:-62879226 | MS.gene007960:CDS |
GCTAGCACAAAGGTAACAGA+AGG | 0.636570 | 3.3:+62876983 | None:intergenic |
GACATTAGTAACCTTTGCAG+GGG | 0.641806 | 3.3:-62876752 | MS.gene007960:CDS |
ACTATATGGTCCTCTCTACA+CGG | 0.654238 | 3.3:-62876315 | MS.gene007960:intron |
ATAGAGGGTACCGTGTAGAG+AGG | 0.656220 | 3.3:+62876305 | None:intergenic |
TCCATGGCCAGTCTCAACAT+GGG | 0.656868 | 3.3:-62879210 | MS.gene007960:CDS |
TTGATGATGATACTTTACAA+AGG | 0.659362 | 3.3:-62876727 | MS.gene007960:CDS |
CACATAATACGCTATTCCTG+AGG | 0.664509 | 3.3:+62875423 | None:intergenic |
TGCCATGCAAACTAGTGTGG+TGG | 0.675189 | 3.3:-62876396 | MS.gene007960:CDS |
TGGTGCCATGCAAACTAGTG+TGG | 0.679552 | 3.3:-62876399 | MS.gene007960:CDS |
TGACAATGGGTGTCTTTGTG+CGG | 0.682941 | 3.3:-62878655 | MS.gene007960:CDS |
AAGTGATGATCATACAAAGG+GGG | 0.720906 | 3.3:+62875350 | None:intergenic |
CAAGTGATGATCATACAAAG+GGG | 0.746307 | 3.3:+62875349 | None:intergenic |
AGGGCCTTATGTGTTAACGG+TGG | 0.764572 | 3.3:-62879268 | MS.gene007960:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAAAATAATTTTTTATT+AGG | - | chr3.3:62876741-62876760 | MS.gene007960:CDS | 0.0% |
!! | AAAAACAATTAAATATAATG+TGG | + | chr3.3:62876971-62876990 | None:intergenic | 10.0% |
!! | AAAACAATTAAATATAATGT+GGG | + | chr3.3:62876970-62876989 | None:intergenic | 10.0% |
!! | ATATATATATGAAAAAAGTT+AGG | + | chr3.3:62877941-62877960 | None:intergenic | 10.0% |
!! | TATATATATGAAAAAAGTTA+GGG | + | chr3.3:62877940-62877959 | None:intergenic | 10.0% |
!! | TCCTAATATATTAAAATTAA+AGG | - | chr3.3:62877278-62877297 | MS.gene007960:intron | 10.0% |
!! | TGTAATTAAGATTATAAATT+TGG | + | chr3.3:62878564-62878583 | None:intergenic | 10.0% |
!!! | ACCTTTAATTTTAATATATT+AGG | + | chr3.3:62877282-62877301 | None:intergenic | 10.0% |
!!! | TATGCTTTATTTTAATATAT+GGG | - | chr3.3:62878518-62878537 | MS.gene007960:intron | 10.0% |
!!! | TCATTTTCTTTATAAAATTT+TGG | - | chr3.3:62876638-62876657 | MS.gene007960:CDS | 10.0% |
!!! | TTATGCTTTATTTTAATATA+TGG | - | chr3.3:62878517-62878536 | MS.gene007960:intron | 10.0% |
!!! | TTTTCTTTAAAGATATTTAA+AGG | - | chr3.3:62875458-62875477 | MS.gene007960:intron | 10.0% |
!! | AAAACACTTTCATAAAAAAA+AGG | + | chr3.3:62877662-62877681 | None:intergenic | 15.0% |
!! | AAACACTTTCATAAAAAAAA+GGG | + | chr3.3:62877661-62877680 | None:intergenic | 15.0% |
!! | AATTGTAAAAAAATGTTGTT+TGG | + | chr3.3:62876537-62876556 | None:intergenic | 15.0% |
!! | ATGCAAAAATAGTAAATAAT+TGG | - | chr3.3:62876709-62876728 | MS.gene007960:CDS | 15.0% |
!! | CAATGAATTTAAAAATTTCA+GGG | - | chr3.3:62878753-62878772 | MS.gene007960:intron | 15.0% |
!! | GTATGGAATTAAAATATTTA+CGG | - | chr3.3:62875202-62875221 | MS.gene007960:intron | 15.0% |
!! | GTCATTTATCAAATTATTAT+TGG | + | chr3.3:62879081-62879100 | None:intergenic | 15.0% |
!! | TATATTAAAATTAAAGGTCT+TGG | - | chr3.3:62877284-62877303 | MS.gene007960:intron | 15.0% |
!! | TCAATGAATTTAAAAATTTC+AGG | - | chr3.3:62878752-62878771 | MS.gene007960:intron | 15.0% |
!! | TGAATTACTAACAAAAATTA+GGG | - | chr3.3:62875986-62876005 | MS.gene007960:intron | 15.0% |
!! | TGCAAAAATAGTAAATAATT+GGG | - | chr3.3:62876710-62876729 | MS.gene007960:CDS | 15.0% |
!! | TTATACATTTAAATAAGTGT+AGG | + | chr3.3:62876940-62876959 | None:intergenic | 15.0% |
!! | TTGAATTACTAACAAAAATT+AGG | - | chr3.3:62875985-62876004 | MS.gene007960:intron | 15.0% |
!!! | AAATAAAGCATAATTTTGAT+TGG | + | chr3.3:62878510-62878529 | None:intergenic | 15.0% |
!!! | ATGCTTTATTTTAATATATG+GGG | - | chr3.3:62878519-62878538 | MS.gene007960:intron | 15.0% |
!!! | GATAAATAATTGTTGATTTT+TGG | - | chr3.3:62878143-62878162 | MS.gene007960:intron | 15.0% |
!!! | TACTATCCATATTTTTTTTA+GGG | + | chr3.3:62875808-62875827 | None:intergenic | 15.0% |
!! | AACACTTTCATAAAAAAAAG+GGG | + | chr3.3:62877660-62877679 | None:intergenic | 20.0% |
!! | AAGAGAAATAAGTATTTCAA+GGG | - | chr3.3:62875855-62875874 | MS.gene007960:intron | 20.0% |
!! | ACATAATTAAATGTAATCAG+AGG | - | chr3.3:62879099-62879118 | MS.gene007960:intron | 20.0% |
!! | AGTTTACAAAAATATGGTTT+GGG | + | chr3.3:62878431-62878450 | None:intergenic | 20.0% |
!! | ATCATTCGATTAAGATTTAA+TGG | + | chr3.3:62875355-62875374 | None:intergenic | 20.0% |
!! | ATGTTAGAAATCACAAAATT+AGG | - | chr3.3:62876213-62876232 | MS.gene007960:intron | 20.0% |
!! | ATTGTAAAACAGAATAAGTA+AGG | + | chr3.3:62875114-62875133 | None:intergenic | 20.0% |
!! | TAAGAGAAATAAGTATTTCA+AGG | - | chr3.3:62875854-62875873 | MS.gene007960:intron | 20.0% |
!! | TAGTTTACAAAAATATGGTT+TGG | + | chr3.3:62878432-62878451 | None:intergenic | 20.0% |
!! | TGTAGGTCTATTATTAAAAA+GGG | + | chr3.3:62876893-62876912 | None:intergenic | 20.0% |
!! | TTAAATGCTGTATAAAATAC+TGG | + | chr3.3:62878837-62878856 | None:intergenic | 20.0% |
!! | TTATATAACCCGAAAAAAAT+AGG | + | chr3.3:62878233-62878252 | None:intergenic | 20.0% |
!! | TTCAAAAGTTGTCATATAAA+TGG | - | chr3.3:62876665-62876684 | MS.gene007960:CDS | 20.0% |
!! | TTGATTATAACACAAGTTAA+TGG | + | chr3.3:62877376-62877395 | None:intergenic | 20.0% |
!! | TTGTAAAACAGAATAAGTAA+GGG | + | chr3.3:62875113-62875132 | None:intergenic | 20.0% |
!! | TTTCTAACACTTTATAAGTA+TGG | - | chr3.3:62875776-62875795 | MS.gene007960:intron | 20.0% |
!!! | AAACCATATTTTTGTAAACT+AGG | - | chr3.3:62878431-62878450 | MS.gene007960:intron | 20.0% |
!!! | AAACTTTTATAAGAAAGAAG+AGG | + | chr3.3:62878944-62878963 | None:intergenic | 20.0% |
!!! | ACTATCCATATTTTTTTTAG+GGG | + | chr3.3:62875807-62875826 | None:intergenic | 20.0% |
!!! | CTACTATCCATATTTTTTTT+AGG | + | chr3.3:62875809-62875828 | None:intergenic | 20.0% |
!!! | TCTTTAAAGATATTTAAAGG+TGG | - | chr3.3:62875461-62875480 | MS.gene007960:intron | 20.0% |
!!! | TTTTTTTGGCATTAATTCTT+CGG | + | chr3.3:62877343-62877362 | None:intergenic | 20.0% |
! | AAAACACTTATCGATAGAAT+TGG | + | chr3.3:62876030-62876049 | None:intergenic | 25.0% |
! | AAAAGGGAAATGTTAAGAAA+AGG | + | chr3.3:62876877-62876896 | None:intergenic | 25.0% |
! | AATAGAAAAGGTGAATTTGT+GGG | + | chr3.3:62877506-62877525 | None:intergenic | 25.0% |
! | AATGAAGTAGCTGTTTAAAT+TGG | - | chr3.3:62878371-62878390 | MS.gene007960:intron | 25.0% |
! | AATGATTATCAATGTTTCCA+AGG | - | chr3.3:62875369-62875388 | MS.gene007960:CDS | 25.0% |
! | ATAGTCCCCTAAAAAAAATA+TGG | - | chr3.3:62875799-62875818 | MS.gene007960:intron | 25.0% |
! | ATGAAGTAGCTGTTTAAATT+GGG | - | chr3.3:62878372-62878391 | MS.gene007960:intron | 25.0% |
! | ATTATAACACAAGTTAATGG+TGG | + | chr3.3:62877373-62877392 | None:intergenic | 25.0% |
! | ATTTAAACAGCTACTTCATT+TGG | + | chr3.3:62878371-62878390 | None:intergenic | 25.0% |
! | ATTTGGTTACCTGAAAATTA+CGG | + | chr3.3:62877249-62877268 | None:intergenic | 25.0% |
! | CGTAAAAAATTTGTCTCAAT+TGG | - | chr3.3:62877068-62877087 | MS.gene007960:CDS | 25.0% |
! | GTGTAGGTCTATTATTAAAA+AGG | + | chr3.3:62876894-62876913 | None:intergenic | 25.0% |
! | TATTAGGAGAACCTATAATT+TGG | + | chr3.3:62877266-62877285 | None:intergenic | 25.0% |
! | TCAACCTTAATATGCTTAAT+TGG | - | chr3.3:62877788-62877807 | MS.gene007960:intron | 25.0% |
! | TGTGTTATAATCAATGTATC+AGG | - | chr3.3:62877382-62877401 | MS.gene007960:intron | 25.0% |
! | TTAAACACACAAAATTGAGT+CGG | - | chr3.3:62876311-62876330 | MS.gene007960:intron | 25.0% |
! | TTACATCTAAAGAGAATAAG+TGG | + | chr3.3:62876160-62876179 | None:intergenic | 25.0% |
! | TTTCTCTTTCTCTATTACTT+TGG | - | chr3.3:62876599-62876618 | MS.gene007960:CDS | 25.0% |
!! | ATATCATTTCTCTTTTGCAT+AGG | + | chr3.3:62876514-62876533 | None:intergenic | 25.0% |
!! | GTACCATTTGGTATTATTTT+AGG | - | chr3.3:62877120-62877139 | MS.gene007960:intron | 25.0% |
!! | TATCATTTCTCTTTTGCATA+GGG | + | chr3.3:62876513-62876532 | None:intergenic | 25.0% |
!! | TTAAGTTCGAAAAAAAGTGT+AGG | + | chr3.3:62876910-62876929 | None:intergenic | 25.0% |
!! | TTTGTTGATTACAGTATCAT+TGG | - | chr3.3:62879134-62879153 | MS.gene007960:CDS | 25.0% |
!! | TTTTTCATTGCATTTGCAAT+AGG | + | chr3.3:62878123-62878142 | None:intergenic | 25.0% |
!!! | ATGGTGGTATAAGATTTTTT+TGG | + | chr3.3:62877357-62877376 | None:intergenic | 25.0% |
!!! | CTATCGATAAGTGTTTTTTT+TGG | - | chr3.3:62876033-62876052 | MS.gene007960:intron | 25.0% |
!!! | TTGATGATGATACTTTACAA+AGG | - | chr3.3:62877480-62877499 | MS.gene007960:intron | 25.0% |
!!! | TTTTCAGGTAACCAAATTAT+AGG | - | chr3.3:62877252-62877271 | MS.gene007960:intron | 25.0% |
AAAGAATAGAATGTCTACCA+AGG | - | chr3.3:62877990-62878009 | MS.gene007960:intron | 30.0% | |
AAATGTTAACATGTAGCCTT+AGG | + | chr3.3:62877320-62877339 | None:intergenic | 30.0% | |
ACAAGTGATGATCATACAAA+GGG | + | chr3.3:62878862-62878881 | None:intergenic | 30.0% | |
ACATGTTTCATTCACTAACT+TGG | - | chr3.3:62875152-62875171 | MS.gene007960:intron | 30.0% | |
AGAAAAGTGGTAATTAGCAT+AGG | + | chr3.3:62875502-62875521 | None:intergenic | 30.0% | |
AGATCAAGGATTTACTTTCT+TGG | - | chr3.3:62877151-62877170 | MS.gene007960:intron | 30.0% | |
ATATCTGATACGTCTCAAAT+AGG | - | chr3.3:62878079-62878098 | MS.gene007960:intron | 30.0% | |
ATCAAGGATTTACTTTCTTG+GGG | - | chr3.3:62877153-62877172 | MS.gene007960:intron | 30.0% | |
ATGTATTGTAACGTACCATT+TGG | - | chr3.3:62877108-62877127 | MS.gene007960:intron | 30.0% | |
CAAAACACGTTAGAATGTTT+CGG | - | chr3.3:62878284-62878303 | MS.gene007960:intron | 30.0% | |
CGAGTTTGATAAAATCAAGA+TGG | - | chr3.3:62879017-62879036 | MS.gene007960:intron | 30.0% | |
CTTTCAAAAATGAGTGCAAA+GGG | + | chr3.3:62875081-62875100 | None:intergenic | 30.0% | |
GAATAGAAAAGGTGAATTTG+TGG | + | chr3.3:62877507-62877526 | None:intergenic | 30.0% | |
GATCAAGGATTTACTTTCTT+GGG | - | chr3.3:62877152-62877171 | MS.gene007960:intron | 30.0% | |
GTGCCTAGTTTACAAAAATA+TGG | + | chr3.3:62878437-62878456 | None:intergenic | 30.0% | |
TACAACTTTGCAGGAAAATT+AGG | - | chr3.3:62875522-62875541 | MS.gene007960:intron | 30.0% | |
TAGACATCAGATGAAGTAAT+TGG | + | chr3.3:62879281-62879300 | None:intergenic | 30.0% | |
TATTAGGTTTAAACCCACTT+GGG | - | chr3.3:62876757-62876776 | MS.gene007960:CDS | 30.0% | |
TCACGTTAATATAACTCAGT+TGG | - | chr3.3:62876087-62876106 | MS.gene007960:intron | 30.0% | |
TGGCCTAAAATAATACCAAA+TGG | + | chr3.3:62877126-62877145 | None:intergenic | 30.0% | |
TTATTAGGTTTAAACCCACT+TGG | - | chr3.3:62876756-62876775 | MS.gene007960:CDS | 30.0% | |
TTTCAAAAATGAGTGCAAAG+GGG | + | chr3.3:62875080-62875099 | None:intergenic | 30.0% | |
! | AGGGTATTTGAGATTAATAG+AGG | + | chr3.3:62877921-62877940 | None:intergenic | 30.0% |
! | GGGTATTTGAGATTAATAGA+GGG | + | chr3.3:62877920-62877939 | None:intergenic | 30.0% |
! | GTCATCTTTCTTCATTTTAC+AGG | - | chr3.3:62877623-62877642 | MS.gene007960:intron | 30.0% |
! | TGATTTTATCAAACTCGTGA+TGG | + | chr3.3:62879014-62879033 | None:intergenic | 30.0% |
! | TTCGGGTTATATAATTCGAA+CGG | - | chr3.3:62878239-62878258 | MS.gene007960:intron | 30.0% |
!! | ATTGATAACTAGCTCTACAT+AGG | + | chr3.3:62875617-62875636 | None:intergenic | 30.0% |
!!! | ATTGCGTGTCCTATTTTTTT+CGG | - | chr3.3:62878221-62878240 | MS.gene007960:intron | 30.0% |
!!! | CGGATTTTAGAATCTGAATA+GGG | - | chr3.3:62878304-62878323 | MS.gene007960:intron | 30.0% |
!!! | CTGTTTTTGGAGAATAGAAA+AGG | + | chr3.3:62877518-62877537 | None:intergenic | 30.0% |
!!! | TCGGATTTTAGAATCTGAAT+AGG | - | chr3.3:62878303-62878322 | MS.gene007960:intron | 30.0% |
AACTTGGATTCCATGTAGTT+GGG | - | chr3.3:62875168-62875187 | MS.gene007960:intron | 35.0% | |
AAGTCTAAACTCAATCTCCT+TGG | + | chr3.3:62878010-62878029 | None:intergenic | 35.0% | |
AAGTGATGATCATACAAAGG+GGG | + | chr3.3:62878860-62878879 | None:intergenic | 35.0% | |
AATAAGTATATCCCGTTGTC+GGG | + | chr3.3:62875411-62875430 | None:intergenic | 35.0% | |
AATTAGGCCAAAGATGACAA+TGG | - | chr3.3:62875538-62875557 | MS.gene007960:intron | 35.0% | |
ACAGCTACTTCATTTGGAAA+AGG | + | chr3.3:62878365-62878384 | None:intergenic | 35.0% | |
AGGAACACTCTTTCTAATGA+TGG | - | chr3.3:62877587-62877606 | MS.gene007960:intron | 35.0% | |
AGGACACGCAATAAATCAAT+AGG | + | chr3.3:62878213-62878232 | None:intergenic | 35.0% | |
ATGATCATCACTTGTGCTTT+AGG | - | chr3.3:62878867-62878886 | MS.gene007960:intron | 35.0% | |
ATTAGGCCAAAGATGACAAT+GGG | - | chr3.3:62875539-62875558 | MS.gene007960:intron | 35.0% | |
CAAGTGATGATCATACAAAG+GGG | + | chr3.3:62878861-62878880 | None:intergenic | 35.0% | |
CAATAAGTATATCCCGTTGT+CGG | + | chr3.3:62875412-62875431 | None:intergenic | 35.0% | |
CACAAGTGATGATCATACAA+AGG | + | chr3.3:62878863-62878882 | None:intergenic | 35.0% | |
CCAAAAACAGCACATAATTC+TGG | - | chr3.3:62877528-62877547 | MS.gene007960:intron | 35.0% | |
CCTTTCAAAAATGAGTGCAA+AGG | + | chr3.3:62875082-62875101 | None:intergenic | 35.0% | |
CTACTTCATTTGGAAAAGGT+TGG | + | chr3.3:62878361-62878380 | None:intergenic | 35.0% | |
CTGCAAAGTTGTAAGAAAAG+TGG | + | chr3.3:62875515-62875534 | None:intergenic | 35.0% | |
GAAGCATAGCAAAAGTGATT+GGG | - | chr3.3:62877433-62877452 | MS.gene007960:intron | 35.0% | |
GAATCAAATATGAGACCATG+AGG | + | chr3.3:62876825-62876844 | None:intergenic | 35.0% | |
GACGTATCAGATATTAACTG+TGG | + | chr3.3:62878073-62878092 | None:intergenic | 35.0% | |
GGAACACTCTTTCTAATGAT+GGG | - | chr3.3:62877588-62877607 | MS.gene007960:intron | 35.0% | |
GGACACGCAATAAATCAATA+GGG | + | chr3.3:62878212-62878231 | None:intergenic | 35.0% | |
GGCACCAATTAAGCATATTA+AGG | + | chr3.3:62877795-62877814 | None:intergenic | 35.0% | |
GTAAATCCTTGATCTATCAC+TGG | + | chr3.3:62877146-62877165 | None:intergenic | 35.0% | |
GTCTCATATTTGATTCTCTC+TGG | - | chr3.3:62876829-62876848 | MS.gene007960:intron | 35.0% | |
TAACTTGGATTCCATGTAGT+TGG | - | chr3.3:62875167-62875186 | MS.gene007960:intron | 35.0% | |
TAGTGATCATCACTTGTGTT+CGG | - | chr3.3:62878972-62878991 | MS.gene007960:intron | 35.0% | |
TTCAAAAATGAGTGCAAAGG+GGG | + | chr3.3:62875079-62875098 | None:intergenic | 35.0% | |
TTCACAACATGACAGACAAA+TGG | - | chr3.3:62878028-62878047 | MS.gene007960:intron | 35.0% | |
TTTCAGGGAATAATTACCTC+AGG | - | chr3.3:62878768-62878787 | MS.gene007960:intron | 35.0% | |
! | CACTTTTCTTACAACTTTGC+AGG | - | chr3.3:62875513-62875532 | MS.gene007960:intron | 35.0% |
! | CGAAACATTCTAACGTGTTT+TGG | + | chr3.3:62878286-62878305 | None:intergenic | 35.0% |
! | TTTTGCATAGGGTCATAAGA+GGG | + | chr3.3:62876502-62876521 | None:intergenic | 35.0% |
!! | AACATTCTAACGTGTTTTGG+AGG | + | chr3.3:62878283-62878302 | None:intergenic | 35.0% |
!! | CCTTTGCACTCATTTTTGAA+AGG | - | chr3.3:62875079-62875098 | MS.gene007960:intron | 35.0% |
!! | TTACTGATTCACTTTGTGTC+TGG | + | chr3.3:62877018-62877037 | None:intergenic | 35.0% |
!!! | CCAGAATTATGTGCTGTTTT+TGG | + | chr3.3:62877531-62877550 | None:intergenic | 35.0% |
!!! | CGTGTTTTGGAGGTTTTTAT+AGG | + | chr3.3:62878273-62878292 | None:intergenic | 35.0% |
!!! | TTGCGTGTCCTATTTTTTTC+GGG | - | chr3.3:62878222-62878241 | MS.gene007960:intron | 35.0% |
AAGACACCCATTGTCATCTT+TGG | + | chr3.3:62875548-62875567 | None:intergenic | 40.0% | |
ACACGCAAACTCTCAAACAT+TGG | - | chr3.3:62877559-62877578 | MS.gene007960:intron | 40.0% | |
ACTATATGGTCCTCTCTACA+CGG | - | chr3.3:62877892-62877911 | MS.gene007960:intron | 40.0% | |
AGCGTATTATGTGCAAGGAT+TGG | - | chr3.3:62878794-62878813 | MS.gene007960:intron | 40.0% | |
ATAGACCCACTGCAATAATC+AGG | + | chr3.3:62879163-62879182 | None:intergenic | 40.0% | |
ATTCATTCCCATGTTGAGAC+TGG | + | chr3.3:62875007-62875026 | None:intergenic | 40.0% | |
CAATGTTTCCAAGGAGTGAA+TGG | - | chr3.3:62875378-62875397 | MS.gene007960:CDS | 40.0% | |
CACATAATACGCTATTCCTG+AGG | + | chr3.3:62878787-62878806 | None:intergenic | 40.0% | |
CACGCAAACTCTCAAACATT+GGG | - | chr3.3:62877560-62877579 | MS.gene007960:intron | 40.0% | |
CACGCAATAAATCAATAGGG+TGG | + | chr3.3:62878209-62878228 | None:intergenic | 40.0% | |
CGAAGCATAGCAAAAGTGAT+TGG | - | chr3.3:62877432-62877451 | MS.gene007960:intron | 40.0% | |
CTTGGGGATGCAATATACAT+CGG | - | chr3.3:62877169-62877188 | MS.gene007960:intron | 40.0% | |
GAAAATTACGGCTAGCACAA+AGG | + | chr3.3:62877237-62877256 | None:intergenic | 40.0% | |
GAACACAAGTGATGATCACT+AGG | + | chr3.3:62878973-62878992 | None:intergenic | 40.0% | |
GACATTAGTAACCTTTGCAG+GGG | - | chr3.3:62877455-62877474 | MS.gene007960:intron | 40.0% | |
GGAATAGCGTATTATGTGCA+AGG | - | chr3.3:62878789-62878808 | MS.gene007960:intron | 40.0% | |
GGACATTAGTAACCTTTGCA+GGG | - | chr3.3:62877454-62877473 | MS.gene007960:intron | 40.0% | |
GGTTGGGACTTTAGACTATA+TGG | - | chr3.3:62877878-62877897 | MS.gene007960:intron | 40.0% | |
GTTGGGATACTCTACATGTA+TGG | - | chr3.3:62875185-62875204 | MS.gene007960:intron | 40.0% | |
TAACGGTGGCACTTCAATTT+GGG | - | chr3.3:62874953-62874972 | MS.gene007960:CDS | 40.0% | |
TAGACCCACTGCAATAATCA+GGG | + | chr3.3:62879162-62879181 | None:intergenic | 40.0% | |
TCAAATAGGATGACCTCCAA+CGG | - | chr3.3:62878093-62878112 | MS.gene007960:intron | 40.0% | |
TTAACGGTGGCACTTCAATT+TGG | - | chr3.3:62874952-62874971 | MS.gene007960:CDS | 40.0% | |
TTTAGGCCAGTGATAGATCA+AGG | - | chr3.3:62877137-62877156 | MS.gene007960:intron | 40.0% | |
TTTGAGTGTGTTCATCCTCA+TGG | - | chr3.3:62876807-62876826 | MS.gene007960:intron | 40.0% | |
! | AGGAGCATACATATTCTCCA+TGG | - | chr3.3:62874981-62875000 | MS.gene007960:CDS | 40.0% |
! | CTTTTGCATAGGGTCATAAG+AGG | + | chr3.3:62876503-62876522 | None:intergenic | 40.0% |
! | GGATTGGTATTTCAAAGCAG+AGG | - | chr3.3:62878810-62878829 | MS.gene007960:intron | 40.0% |
! | TCAGTTTGCTTCATTGCAAC+TGG | + | chr3.3:62879248-62879267 | None:intergenic | 40.0% |
! | TGTAGAGTATCCCAACTACA+TGG | + | chr3.3:62875181-62875200 | None:intergenic | 40.0% |
! | TTGTGCTAGCCGTAATTTTC+AGG | - | chr3.3:62877237-62877256 | MS.gene007960:intron | 40.0% |
!! | CTTTCTAATGATGGGTTGTG+TGG | - | chr3.3:62877596-62877615 | MS.gene007960:intron | 40.0% |
!! | GATAATGGCGCTTGCATTTT+TGG | - | chr3.3:62875574-62875593 | MS.gene007960:intron | 40.0% |
!! | GTTGATAGTGACATTTCTGC+TGG | + | chr3.3:62877773-62877792 | None:intergenic | 40.0% |
!!! | AGTTTTAAGTCAACACCACG+AGG | + | chr3.3:62876787-62876806 | None:intergenic | 40.0% |
AAATAGGATGACCTCCAACG+GGG | - | chr3.3:62878095-62878114 | MS.gene007960:intron | 45.0% | |
AATGGTGAGAATCCCGACAA+CGG | - | chr3.3:62875396-62875415 | MS.gene007960:CDS | 45.0% | |
ACCAGACAGTGACAGGATTT+AGG | - | chr3.3:62878405-62878424 | MS.gene007960:intron | 45.0% | |
ACTCTCAAACATTGGGTCTC+AGG | - | chr3.3:62877567-62877586 | MS.gene007960:intron | 45.0% | |
AGGTTTAAACCCACTTGGGT+TGG | - | chr3.3:62876761-62876780 | MS.gene007960:CDS | 45.0% | |
AGTGCCACCGTTAACACATA+AGG | + | chr3.3:62874946-62874965 | None:intergenic | 45.0% | |
AGTGGAGTTGCTCTGCAAAA+AGG | + | chr3.3:62878899-62878918 | None:intergenic | 45.0% | |
CAAATAGGATGACCTCCAAC+GGG | - | chr3.3:62878094-62878113 | MS.gene007960:intron | 45.0% | |
GAGTTGCTCTGCAAAAAGGA+AGG | + | chr3.3:62878895-62878914 | None:intergenic | 45.0% | |
GATTCTCACCATTCACTCCT+TGG | + | chr3.3:62875389-62875408 | None:intergenic | 45.0% | |
GCTAGCACAAAGGTAACAGA+AGG | + | chr3.3:62877227-62877246 | None:intergenic | 45.0% | |
GGGACATTAGTAACCTTTGC+AGG | - | chr3.3:62877453-62877472 | MS.gene007960:intron | 45.0% | |
GGGTCTATATTCTGTGGTGT+GGG | - | chr3.3:62879175-62879194 | MS.gene007960:CDS | 45.0% | |
GGTCTATATTCTGTGGTGTG+GGG | - | chr3.3:62879176-62879195 | MS.gene007960:CDS | 45.0% | |
TGACAATGGGTGTCTTTGTG+CGG | - | chr3.3:62875552-62875571 | MS.gene007960:intron | 45.0% | |
TGCAGTGGGTCTATATTCTG+TGG | - | chr3.3:62879169-62879188 | MS.gene007960:CDS | 45.0% | |
TGCTTCATTGCAACTGGTGA+TGG | + | chr3.3:62879242-62879261 | None:intergenic | 45.0% | |
TGGGTCTATATTCTGTGGTG+TGG | - | chr3.3:62879174-62879193 | MS.gene007960:CDS | 45.0% | |
TTGAGGTTTGGGCTATTGGT+TGG | - | chr3.3:62877861-62877880 | MS.gene007960:intron | 45.0% | |
TTTGCAGAGCAACTCCACTT+GGG | - | chr3.3:62878900-62878919 | MS.gene007960:intron | 45.0% | |
! | GCACTTCAATTTGGGTTTGC+AGG | - | chr3.3:62874961-62874980 | MS.gene007960:CDS | 45.0% |
! | TGAGGTTTGGGCTATTGGTT+GGG | - | chr3.3:62877862-62877881 | MS.gene007960:intron | 45.0% |
! | TTTTGCAGAGCAACTCCACT+TGG | - | chr3.3:62878899-62878918 | MS.gene007960:intron | 45.0% |
!! | TAATGATGGGTTGTGTGGCT+TGG | - | chr3.3:62877601-62877620 | MS.gene007960:intron | 45.0% |
!! | TCACTCTGGTCTTGAGGTTT+GGG | - | chr3.3:62877850-62877869 | MS.gene007960:intron | 45.0% |
!! | TCTTGGTAACGTGTGTCCTA+AGG | - | chr3.3:62877301-62877320 | MS.gene007960:intron | 45.0% |
!! | TTCATTGCAACTGGTGATGG+TGG | + | chr3.3:62879239-62879258 | None:intergenic | 45.0% |
!! | AATATTACATTATATATATA+TGG | - | chr3.3:62876114-62876133 | MS.gene007960:intron | 5.0% |
AAATGAGTGCAAAGGGGGCA+AGG | + | chr3.3:62875074-62875093 | None:intergenic | 50.0% | |
AATGAGTGCAAAGGGGGCAA+GGG | + | chr3.3:62875073-62875092 | None:intergenic | 50.0% | |
AGATGGTCCTGTCACAGACA+CGG | - | chr3.3:62879034-62879053 | MS.gene007960:intron | 50.0% | |
ATCCTGTCACTGTCTGGTGT+TGG | + | chr3.3:62878403-62878422 | None:intergenic | 50.0% | |
ATGGTGAGAATCCCGACAAC+GGG | - | chr3.3:62875397-62875416 | MS.gene007960:CDS | 50.0% | |
ATTTGCAATAGGCTCCCCGT+TGG | + | chr3.3:62878112-62878131 | None:intergenic | 50.0% | |
CATCATCAATGCCCCTGCAA+AGG | + | chr3.3:62877469-62877488 | None:intergenic | 50.0% | |
GAGGGACTCAATTAGACGCT+TGG | + | chr3.3:62876484-62876503 | None:intergenic | 50.0% | |
GCCTAAATCCTGTCACTGTC+TGG | + | chr3.3:62878409-62878428 | None:intergenic | 50.0% | |
GGAGCCCTGATTATTGCAGT+GGG | - | chr3.3:62879155-62879174 | MS.gene007960:CDS | 50.0% | |
GGGTGTCTTTGTGCGGATAA+TGG | - | chr3.3:62875559-62875578 | MS.gene007960:intron | 50.0% | |
GGTCTTGAGGTTTGGGCTAT+TGG | - | chr3.3:62877857-62877876 | MS.gene007960:intron | 50.0% | |
TCAATGTCCGTGTCTGTGAC+AGG | + | chr3.3:62879044-62879063 | None:intergenic | 50.0% | |
TCCATGGCCAGTCTCAACAT+GGG | - | chr3.3:62874997-62875016 | MS.gene007960:CDS | 50.0% | |
TGCCATGCAAACTAGTGTGG+TGG | - | chr3.3:62877811-62877830 | MS.gene007960:intron | 50.0% | |
TGGAGCCCTGATTATTGCAG+TGG | - | chr3.3:62879154-62879173 | MS.gene007960:CDS | 50.0% | |
TTCATTGCTGAGCGTCACTC+TGG | - | chr3.3:62877836-62877855 | MS.gene007960:intron | 50.0% | |
! | AGGGCCTTATGTGTTAACGG+TGG | - | chr3.3:62874939-62874958 | MS.gene007960:CDS | 50.0% |
! | GGCAGGGCCTTATGTGTTAA+CGG | - | chr3.3:62874936-62874955 | MS.gene007960:CDS | 50.0% |
! | TGCCACCACACTAGTTTGCA+TGG | + | chr3.3:62877816-62877835 | None:intergenic | 50.0% |
!! | ATAGAGGGTACCGTGTAGAG+AGG | + | chr3.3:62877905-62877924 | None:intergenic | 50.0% |
!! | GTCACTCTGGTCTTGAGGTT+TGG | - | chr3.3:62877849-62877868 | MS.gene007960:intron | 50.0% |
!! | TGGTGCCATGCAAACTAGTG+TGG | - | chr3.3:62877808-62877827 | MS.gene007960:intron | 50.0% |
CACCAACACCAGACAGTGAC+AGG | - | chr3.3:62878398-62878417 | MS.gene007960:intron | 55.0% | |
CAGAGCAACTCCACTTGGGA+AGG | - | chr3.3:62878904-62878923 | MS.gene007960:intron | 55.0% | |
CTCCATGGCCAGTCTCAACA+TGG | - | chr3.3:62874996-62875015 | MS.gene007960:CDS | 55.0% | |
! | TCCCATGTTGAGACTGGCCA+TGG | + | chr3.3:62875001-62875020 | None:intergenic | 55.0% |
!! | GCAACTGGTGATGGTGGCAT+AGG | + | chr3.3:62879233-62879252 | None:intergenic | 55.0% |
!! | TGAGCGTCACTCTGGTCTTG+AGG | - | chr3.3:62877844-62877863 | MS.gene007960:intron | 55.0% |
ACCACGAGGCCAACCCAAGT+GGG | + | chr3.3:62876773-62876792 | None:intergenic | 60.0% | |
TGCAATAGGCTCCCCGTTGG+AGG | + | chr3.3:62878109-62878128 | None:intergenic | 60.0% | |
CACCACGAGGCCAACCCAAG+TGG | + | chr3.3:62876774-62876793 | None:intergenic | 65.0% | |
!! | ACCCACTTGGGTTGGCCTCG+TGG | - | chr3.3:62876769-62876788 | MS.gene007960:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 62874928 | 62879301 | 62874928 | ID=MS.gene007960 |
chr3.3 | mRNA | 62874928 | 62879301 | 62874928 | ID=MS.gene007960.t1;Parent=MS.gene007960 |
chr3.3 | exon | 62879129 | 62879301 | 62879129 | ID=MS.gene007960.t1.exon1;Parent=MS.gene007960.t1 |
chr3.3 | CDS | 62879129 | 62879301 | 62879129 | ID=cds.MS.gene007960.t1;Parent=MS.gene007960.t1 |
chr3.3 | exon | 62878632 | 62878694 | 62878632 | ID=MS.gene007960.t1.exon2;Parent=MS.gene007960.t1 |
chr3.3 | CDS | 62878632 | 62878694 | 62878632 | ID=cds.MS.gene007960.t1;Parent=MS.gene007960.t1 |
chr3.3 | exon | 62876971 | 62877087 | 62876971 | ID=MS.gene007960.t1.exon3;Parent=MS.gene007960.t1 |
chr3.3 | CDS | 62876971 | 62877087 | 62876971 | ID=cds.MS.gene007960.t1;Parent=MS.gene007960.t1 |
chr3.3 | exon | 62876585 | 62876825 | 62876585 | ID=MS.gene007960.t1.exon4;Parent=MS.gene007960.t1 |
chr3.3 | CDS | 62876585 | 62876825 | 62876585 | ID=cds.MS.gene007960.t1;Parent=MS.gene007960.t1 |
chr3.3 | exon | 62876316 | 62876480 | 62876316 | ID=MS.gene007960.t1.exon5;Parent=MS.gene007960.t1 |
chr3.3 | CDS | 62876316 | 62876480 | 62876316 | ID=cds.MS.gene007960.t1;Parent=MS.gene007960.t1 |
chr3.3 | exon | 62875304 | 62875455 | 62875304 | ID=MS.gene007960.t1.exon6;Parent=MS.gene007960.t1 |
chr3.3 | CDS | 62875304 | 62875455 | 62875304 | ID=cds.MS.gene007960.t1;Parent=MS.gene007960.t1 |
chr3.3 | exon | 62874928 | 62875081 | 62874928 | ID=MS.gene007960.t1.exon7;Parent=MS.gene007960.t1 |
chr3.3 | CDS | 62874928 | 62875081 | 62874928 | ID=cds.MS.gene007960.t1;Parent=MS.gene007960.t1 |
Gene Sequence |
Protein sequence |