AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09837

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09837.t1 MTR_7g100050 96.570 379 13 0 1 379 1 379 0.0 749
MS.gene09837.t1 MTR_1g068630 67.218 363 105 5 10 366 8 362 5.57e-180 504
MS.gene09837.t1 MTR_1g030580 53.846 364 158 5 6 364 9 367 3.68e-131 381
MS.gene09837.t1 MTR_3g072500 52.825 354 152 5 13 356 20 368 9.87e-130 378
MS.gene09837.t1 MTR_3g072530 46.334 341 182 1 13 352 14 354 1.15e-117 346
MS.gene09837.t1 MTR_3g072560 49.425 348 152 6 9 343 14 350 4.14e-117 346
MS.gene09837.t1 MTR_3g012420 49.713 348 160 5 9 344 13 357 1.70e-111 331
MS.gene09837.t1 MTR_8g041390 46.579 380 190 5 1 369 1 378 2.25e-111 331
MS.gene09837.t1 MTR_1g030600 46.588 337 174 3 1 332 4 339 3.81e-108 323
MS.gene09837.t1 MTR_0096s0100 43.252 326 174 2 12 332 17 336 1.62e-97 295
MS.gene09837.t1 MTR_3g072520 43.968 373 189 5 11 363 7 379 6.35e-97 294
MS.gene09837.t1 MTR_1g074070 41.994 331 180 2 9 334 12 335 1.14e-92 282
MS.gene09837.t1 MTR_1g051120 40.282 355 206 1 3 357 6 354 3.74e-92 281
MS.gene09837.t1 MTR_3g072500 51.481 270 116 5 97 356 1 265 3.14e-89 271
MS.gene09837.t1 MTR_1g074160 40.557 323 190 1 10 332 10 330 1.65e-88 271
MS.gene09837.t1 MTR_1g074120 38.920 352 199 4 9 357 12 350 2.38e-87 268
MS.gene09837.t1 MTR_3g072500 52.174 253 112 3 13 260 20 268 2.60e-87 266
MS.gene09837.t1 MTR_1g073990 43.939 330 176 5 9 334 12 336 5.31e-87 267
MS.gene09837.t1 MTR_1g074020 39.714 350 193 5 13 357 13 349 3.03e-82 255
MS.gene09837.t1 MTR_1g070175 35.211 355 215 5 5 355 4 347 4.62e-78 244
MS.gene09837.t1 MTR_6g036450 37.216 352 204 5 13 357 16 357 2.78e-77 243
MS.gene09837.t1 MTR_3g112480 37.912 364 207 5 17 367 24 381 8.38e-73 232
MS.gene09837.t1 MTR_3g072530 39.929 283 135 2 13 260 14 296 1.27e-72 229
MS.gene09837.t1 MTR_2g007960 33.248 391 234 5 10 379 9 393 1.84e-71 229
MS.gene09837.t1 MTR_2g007990 34.031 382 228 5 13 378 15 388 8.81e-69 222
MS.gene09837.t1 MTR_2g027030 35.714 350 215 4 13 356 12 357 1.97e-68 220
MS.gene09837.t1 MTR_1g023180 33.246 382 232 3 16 379 24 400 5.26e-68 220
MS.gene09837.t1 MTR_2g007970 36.364 330 205 3 6 332 5 332 9.10e-67 216
MS.gene09837.t1 MTR_6g081840 36.257 342 205 3 22 355 19 355 6.67e-66 213
MS.gene09837.t1 MTR_5g021160 33.803 355 226 4 13 365 7 354 3.27e-65 211
MS.gene09837.t1 MTR_3g095460 35.168 327 200 3 13 332 5 326 4.07e-64 208
MS.gene09837.t1 MTR_7g111830 35.866 329 203 3 14 335 8 335 4.65e-64 209
MS.gene09837.t1 MTR_4g106720 34.783 322 208 2 14 334 12 332 4.97e-63 206
MS.gene09837.t1 MTR_3g095420 33.436 326 208 4 14 332 8 331 7.18e-63 206
MS.gene09837.t1 MTR_1g038560 33.143 350 221 4 12 360 2 339 1.66e-62 204
MS.gene09837.t1 MTR_2g016710 30.769 364 241 4 7 369 2 355 2.10e-61 202
MS.gene09837.t1 MTR_2g102340 31.653 357 231 2 18 362 17 372 3.23e-61 201
MS.gene09837.t1 MTR_3g072500 49.246 199 93 2 13 206 20 215 1.10e-60 195
MS.gene09837.t1 MTR_3g095450 34.024 338 212 5 14 342 6 341 1.96e-60 199
MS.gene09837.t1 MTR_8g092650 33.811 349 221 4 13 355 5 349 1.30e-59 196
MS.gene09837.t1 MTR_4g094340 33.628 339 215 5 13 343 9 345 1.49e-59 196
MS.gene09837.t1 MTR_2g007260 32.895 380 241 4 1 372 1 374 2.09e-59 198
MS.gene09837.t1 MTR_4g094340 33.333 342 218 5 10 343 24 363 3.91e-59 196
MS.gene09837.t1 MTR_1g074160 37.200 250 155 1 10 259 10 257 8.00e-59 192
MS.gene09837.t1 MTR_4g129650 33.239 355 221 8 14 363 9 352 1.90e-58 194
MS.gene09837.t1 MTR_8g006120 33.041 342 227 2 14 354 11 351 2.04e-57 192
MS.gene09837.t1 MTR_4g094342 33.131 329 212 4 4 327 6 331 4.95e-57 190
MS.gene09837.t1 MTR_8g006010 31.830 377 235 8 12 373 9 378 3.00e-56 189
MS.gene09837.t1 MTR_1g114210 31.897 348 215 6 13 352 11 344 5.74e-56 187
MS.gene09837.t1 MTR_4g094360 31.180 356 235 5 5 355 6 356 6.93e-56 188
MS.gene09837.t1 MTR_1g030400 30.939 362 222 6 22 363 16 369 9.30e-56 187
MS.gene09837.t1 MTR_4g094352 32.708 373 239 5 7 368 6 377 3.12e-55 186
MS.gene09837.t1 MTR_4g094362 30.303 363 236 5 5 357 6 361 6.79e-55 185
MS.gene09837.t1 MTR_3g095440 33.333 345 219 5 14 349 6 348 1.04e-53 181
MS.gene09837.t1 MTR_3g112480 35.556 315 184 5 66 367 18 326 4.44e-53 179
MS.gene09837.t1 MTR_2g065550 32.609 322 211 5 14 332 11 329 5.66e-53 180
MS.gene09837.t1 MTR_3g090550 30.994 342 232 4 14 355 7 344 2.86e-52 177
MS.gene09837.t1 MTR_8g006090 31.534 352 233 5 14 363 12 357 2.62e-51 175
MS.gene09837.t1 MTR_2g016710 30.892 314 214 2 7 320 2 312 7.38e-51 173
MS.gene09837.t1 MTR_5g025290 31.285 358 219 6 12 344 10 365 2.35e-49 171
MS.gene09837.t1 MTR_5g025290 31.285 358 219 6 12 344 38 393 2.58e-49 171
MS.gene09837.t1 MTR_5g034930 32.653 343 219 7 22 360 15 349 3.63e-49 169
MS.gene09837.t1 MTR_1g052205 36.471 255 140 6 117 361 4 246 8.48e-49 166
MS.gene09837.t1 MTR_5g034990 31.288 326 205 7 14 332 15 328 1.25e-48 168
MS.gene09837.t1 MTR_5g034910 33.846 325 200 6 18 335 12 328 3.67e-48 166
MS.gene09837.t1 MTR_5g034980 33.227 313 200 6 27 335 21 328 9.78e-48 166
MS.gene09837.t1 MTR_5g025330 31.362 389 226 9 12 363 8 392 1.20e-47 170
MS.gene09837.t1 MTR_0103s0090 31.503 346 228 5 9 353 7 344 1.21e-47 166
MS.gene09837.t1 MTR_5g021160 32.374 278 179 4 90 365 1 271 8.84e-47 161
MS.gene09837.t1 MTR_4g094340 32.500 280 180 4 72 343 1 279 9.63e-47 161
MS.gene09837.t1 MTR_4g094360 31.090 312 207 4 5 311 6 314 1.89e-46 161
MS.gene09837.t1 MTR_5g025340 31.065 338 212 5 12 332 9 342 5.69e-46 162
MS.gene09837.t1 MTR_1g051120 38.835 206 126 0 3 208 6 211 1.63e-45 157
MS.gene09837.t1 MTR_1g051120 38.725 204 125 0 3 206 6 209 5.23e-45 154
MS.gene09837.t1 MTR_5g025400 33.235 340 202 7 13 332 11 345 6.06e-45 159
MS.gene09837.t1 MTR_4g094360 32.841 271 172 5 90 355 44 309 2.44e-44 157
MS.gene09837.t1 MTR_1g068720 54.545 132 58 2 204 333 93 224 3.39e-44 153
MS.gene09837.t1 MTR_1g068720 49.412 85 43 0 5 89 6 90 3.15e-21 92.0
MS.gene09837.t1 MTR_3g019050 27.761 335 228 4 7 332 8 337 4.35e-44 157
MS.gene09837.t1 MTR_5g025370 32.353 340 205 7 13 332 10 344 7.08e-44 156
MS.gene09837.t1 MTR_5g021160 32.946 258 168 3 13 268 7 261 2.88e-43 152
MS.gene09837.t1 MTR_5g068790 25.606 371 255 5 6 368 11 368 9.01e-43 153
MS.gene09837.t1 MTR_5g069040 25.543 368 254 4 6 363 11 368 1.48e-42 153
MS.gene09837.t1 MTR_1g014510 29.738 343 233 5 14 351 12 351 1.94e-42 154
MS.gene09837.t1 MTR_4g129650 34.118 255 157 6 110 363 1 245 6.97e-42 147
MS.gene09837.t1 MTR_8g072350 29.539 369 229 7 12 359 8 366 8.98e-42 150
MS.gene09837.t1 MTR_8g006050 28.460 383 196 10 1 363 1 325 9.10e-42 150
MS.gene09837.t1 MTR_8g006090 31.667 300 201 4 14 311 12 309 2.73e-41 147
MS.gene09837.t1 MTR_8g006090 32.364 275 179 4 90 363 9 277 3.07e-41 146
MS.gene09837.t1 MTR_5g034970 32.727 330 190 8 17 337 11 317 6.60e-41 147
MS.gene09837.t1 MTR_8g092650 33.597 253 152 5 112 355 26 271 7.55e-41 145
MS.gene09837.t1 MTR_5g089390 25.602 332 240 3 17 347 18 343 1.47e-40 147
MS.gene09837.t1 MTR_6g007743 32.131 305 197 6 31 332 30 327 1.81e-39 144
MS.gene09837.t1 MTR_6g007750 31.699 306 200 5 31 332 30 330 7.40e-39 142
MS.gene09837.t1 MTR_0103s0090 31.783 258 169 3 96 353 3 253 4.93e-38 138
MS.gene09837.t1 MTR_6g007747 31.138 334 216 7 31 357 30 356 5.35e-38 140
MS.gene09837.t1 MTR_3g112480 35.000 260 150 5 121 367 1 254 2.73e-37 135
MS.gene09837.t1 MTR_4g094340 32.669 251 164 4 13 260 9 257 1.65e-35 131
MS.gene09837.t1 MTR_6g007740 28.378 370 245 8 9 364 8 371 2.40e-35 135
MS.gene09837.t1 MTR_2g102340 31.276 243 166 1 18 260 43 284 2.69e-35 132
MS.gene09837.t1 MTR_4g094340 32.669 251 164 4 13 260 27 275 2.93e-35 131
MS.gene09837.t1 MTR_3g095440 30.830 253 166 4 14 259 6 256 2.05e-34 128
MS.gene09837.t1 MTR_6g007757 30.973 339 219 7 31 366 30 356 1.19e-33 128
MS.gene09837.t1 MTR_6g007753 30.033 303 193 7 65 358 349 641 2.14e-32 129
MS.gene09837.t1 MTR_6g007753 28.906 256 164 6 124 370 83 329 3.48e-23 101
MS.gene09837.t1 MTR_6g007760 27.922 308 213 6 9 312 7 309 4.72e-32 123
MS.gene09837.t1 MTR_5g034980 32.773 238 151 6 27 260 21 253 2.18e-29 115
MS.gene09837.t1 MTR_4g100840 25.444 338 226 11 22 341 23 352 3.49e-29 116
MS.gene09837.t1 MTR_8g006090 33.043 230 147 4 14 239 12 238 1.46e-28 113
MS.gene09837.t1 MTR_5g012650 26.087 322 217 7 22 332 17 328 2.36e-25 105
MS.gene09837.t1 MTR_4g094342 30.049 203 138 2 4 204 6 206 3.61e-25 103
MS.gene09837.t1 MTR_4g094340 30.542 203 137 3 10 209 24 225 3.82e-24 99.8
MS.gene09837.t1 MTR_6g007757 32.189 233 149 6 31 260 30 256 1.99e-23 99.0
MS.gene09837.t1 MTR_6g007470 49.495 99 48 2 187 284 88 185 9.80e-23 95.9
MS.gene09837.t1 MTR_8g076800 44.545 110 59 2 175 284 138 245 5.64e-22 94.7
MS.gene09837.t1 MTR_8g006090 34.591 159 98 3 84 239 3 158 7.58e-19 84.7
MS.gene09837.t1 MTR_4g094348 40.816 98 52 2 93 185 2 98 1.99e-16 77.0
MS.gene09837.t1 MTR_1g014790 41.558 77 45 0 86 162 36 112 2.64e-14 71.6
MS.gene09837.t1 MTR_1g067780 65.909 44 15 0 13 56 14 57 8.42e-14 66.6
MS.gene09837.t1 MTR_1g068710 55.769 52 23 0 5 56 6 57 2.64e-13 65.1
MS.gene09837.t1 MTR_1g092700 40.964 83 42 2 276 358 1 76 3.43e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09837.t1 AT2G37460 62.299 374 131 5 4 375 9 374 1.84e-167 473
MS.gene09837.t1 AT2G39510 58.430 344 133 3 8 346 2 340 1.63e-141 407
MS.gene09837.t1 AT2G37450 55.710 359 128 5 4 361 3 331 3.97e-135 389
MS.gene09837.t1 AT4G08300 48.919 370 180 4 13 379 10 373 1.86e-118 348
MS.gene09837.t1 AT4G08290 48.333 360 177 4 8 361 7 363 4.27e-118 348
MS.gene09837.t1 AT1G44800 47.283 368 189 3 8 374 5 368 4.75e-118 347
MS.gene09837.t1 AT1G21890 48.248 371 182 2 10 371 7 376 1.25e-116 344
MS.gene09837.t1 AT5G13670 51.070 327 156 2 9 332 3 328 1.32e-115 341
MS.gene09837.t1 AT5G07050 52.134 328 148 4 13 332 17 343 1.41e-114 340
MS.gene09837.t1 AT2G37450 58.712 264 103 3 99 361 1 259 1.24e-107 317
MS.gene09837.t1 AT1G21890 50.482 311 144 2 10 311 7 316 4.57e-105 313
MS.gene09837.t1 AT2G40900 44.152 342 185 2 13 354 10 345 7.33e-104 312
MS.gene09837.t1 AT2G37450 47.632 359 118 7 4 361 3 292 7.58e-101 301
MS.gene09837.t1 AT3G56620 42.902 317 176 2 13 329 10 321 3.10e-91 279
MS.gene09837.t1 AT4G08290 45.914 257 132 3 8 260 7 260 2.40e-77 240
MS.gene09837.t1 AT1G75500 38.889 324 190 2 16 332 22 344 3.30e-71 228
MS.gene09837.t1 AT1G75500 38.889 324 190 2 16 332 22 344 3.30e-71 228
MS.gene09837.t1 AT3G18200 36.517 356 208 5 13 357 34 382 3.42e-71 228
MS.gene09837.t1 AT1G09380 37.500 320 195 3 14 329 8 326 5.75e-68 219
MS.gene09837.t1 AT4G30420 34.127 378 217 9 10 376 5 361 5.05e-64 209
MS.gene09837.t1 AT3G53210 35.196 358 216 6 13 363 9 357 1.38e-63 207
MS.gene09837.t1 AT4G30420 34.140 372 213 9 16 376 1 351 4.43e-62 204
MS.gene09837.t1 AT3G30340 34.328 335 216 3 12 345 9 340 2.57e-61 201
MS.gene09837.t1 AT1G43650 35.494 324 201 5 13 334 6 323 1.59e-60 199
MS.gene09837.t1 AT4G28040 33.151 365 219 6 11 365 5 354 1.23e-58 194
MS.gene09837.t1 AT4G28040 33.151 365 219 6 11 365 5 354 1.23e-58 194
MS.gene09837.t1 AT4G28040 33.151 365 219 6 11 365 5 354 1.23e-58 194
MS.gene09837.t1 AT4G28040 33.151 365 219 6 11 365 5 354 1.23e-58 194
MS.gene09837.t1 AT4G28040 33.151 365 219 6 11 365 5 354 1.23e-58 194
MS.gene09837.t1 AT5G64700 34.451 328 205 4 13 332 7 332 3.41e-58 193
MS.gene09837.t1 AT1G25270 32.791 369 226 6 13 376 2 353 6.44e-54 182
MS.gene09837.t1 AT4G01440 29.909 331 227 2 1 331 1 326 2.80e-51 175
MS.gene09837.t1 AT5G45370 31.302 361 219 6 17 377 23 354 1.96e-47 165
MS.gene09837.t1 AT5G45370 30.688 378 223 7 17 377 23 378 2.80e-47 165
MS.gene09837.t1 AT5G45370 30.688 378 223 7 17 377 23 378 2.80e-47 165
MS.gene09837.t1 AT4G01440 29.073 313 217 2 1 313 1 308 1.94e-46 161
MS.gene09837.t1 AT1G01070 28.205 351 249 3 10 358 12 361 1.96e-46 162
MS.gene09837.t1 AT1G68170 28.977 352 232 5 13 358 2 341 5.65e-45 159
MS.gene09837.t1 AT1G68170 28.977 352 232 5 13 358 12 351 6.87e-45 159
MS.gene09837.t1 AT5G40210 30.337 356 214 11 3 355 6 330 1.58e-44 157
MS.gene09837.t1 AT3G45870 31.818 330 206 7 12 327 10 334 2.15e-44 158
MS.gene09837.t1 AT3G53210 33.452 281 171 6 90 363 29 300 2.73e-44 155
MS.gene09837.t1 AT3G18200 34.363 259 152 5 110 357 1 252 2.82e-44 154
MS.gene09837.t1 AT4G01430 28.652 356 239 6 10 358 5 352 3.10e-44 157
MS.gene09837.t1 AT1G11460 29.358 327 225 3 11 334 13 336 6.99e-44 155
MS.gene09837.t1 AT5G40240 28.342 374 227 7 4 346 4 367 2.49e-43 155
MS.gene09837.t1 AT5G40240 29.651 344 221 6 14 346 20 353 3.20e-43 154
MS.gene09837.t1 AT5G40240 29.651 344 221 6 14 346 20 353 3.20e-43 154
MS.gene09837.t1 AT3G28050 27.577 359 235 4 14 352 12 365 5.23e-42 151
MS.gene09837.t1 AT5G47470 30.029 343 211 6 17 341 33 364 7.21e-42 150
MS.gene09837.t1 AT5G47470 30.029 343 211 6 17 341 61 392 9.87e-42 151
MS.gene09837.t1 AT5G47470 31.269 323 204 5 17 332 61 372 1.42e-41 150
MS.gene09837.t1 AT1G11450 28.485 330 231 4 7 334 9 335 1.49e-41 149
MS.gene09837.t1 AT3G53210 35.156 256 152 5 16 264 12 260 5.10e-41 145
MS.gene09837.t1 AT5G40230 31.481 324 214 6 14 332 21 341 6.77e-41 148
MS.gene09837.t1 AT4G19185 30.178 338 211 6 17 335 24 355 2.59e-40 147
MS.gene09837.t1 AT4G24980 29.870 308 149 5 28 335 1 241 9.50e-40 142
MS.gene09837.t1 AT3G45870 31.210 314 197 7 12 311 10 318 2.08e-39 143
MS.gene09837.t1 AT3G28100 30.000 330 213 7 22 345 22 339 6.83e-38 140
MS.gene09837.t1 AT3G28130 29.560 318 213 5 24 335 23 335 1.05e-37 139
MS.gene09837.t1 AT4G15540 29.545 352 219 8 14 358 17 346 1.02e-36 136
MS.gene09837.t1 AT4G15540 29.545 352 219 8 14 358 17 346 1.02e-36 136
MS.gene09837.t1 AT1G01070 27.575 301 215 3 60 358 15 314 2.31e-36 135
MS.gene09837.t1 AT3G28070 31.687 243 155 4 96 332 7 244 2.58e-36 133
MS.gene09837.t1 AT1G43650 33.212 274 168 7 13 284 6 266 3.07e-36 133
MS.gene09837.t1 AT3G28130 32.377 244 158 3 96 335 9 249 7.65e-36 132
MS.gene09837.t1 AT3G28130 32.377 244 158 3 96 335 9 249 7.65e-36 132
MS.gene09837.t1 AT1G11450 28.720 289 201 4 48 334 6 291 1.09e-35 132
MS.gene09837.t1 AT5G64700 32.157 255 163 4 13 259 7 259 1.25e-35 131
MS.gene09837.t1 AT3G30340 29.600 250 174 2 12 260 9 257 2.08e-35 131
MS.gene09837.t1 AT3G28070 31.687 243 155 4 96 332 99 336 2.77e-35 133
MS.gene09837.t1 AT4G01430 29.126 309 208 5 10 311 5 309 3.74e-35 131
MS.gene09837.t1 AT4G01440 28.846 260 180 2 1 260 1 255 4.78e-35 130
MS.gene09837.t1 AT1G70260 23.529 357 256 5 14 359 12 362 3.42e-34 130
MS.gene09837.t1 AT1G11450 28.322 286 200 4 51 334 2 284 3.97e-34 128
MS.gene09837.t1 AT3G28080 30.579 242 157 5 97 332 8 244 9.43e-34 126
MS.gene09837.t1 AT3G28080 30.579 242 157 5 97 332 8 244 9.43e-34 126
MS.gene09837.t1 AT3G28080 30.579 242 157 5 97 332 8 244 9.43e-34 126
MS.gene09837.t1 AT3G28080 30.579 242 157 5 97 332 8 244 9.43e-34 126
MS.gene09837.t1 AT1G11450 27.362 307 218 4 7 311 9 312 1.81e-33 127
MS.gene09837.t1 AT3G28080 30.579 242 157 5 97 332 97 333 7.45e-33 126
MS.gene09837.t1 AT3G28080 30.579 242 157 5 97 332 89 325 8.13e-33 126
MS.gene09837.t1 AT5G45370 30.537 298 168 7 97 377 1 276 9.04e-33 124
MS.gene09837.t1 AT5G45370 30.537 298 168 7 97 377 1 276 9.04e-33 124
MS.gene09837.t1 AT4G01450 28.529 333 227 5 1 332 1 323 9.32e-32 123
MS.gene09837.t1 AT4G19185 30.682 264 158 6 91 335 20 277 2.56e-31 121
MS.gene09837.t1 AT4G01450 27.564 312 215 5 1 311 1 302 6.94e-31 120
MS.gene09837.t1 AT3G45870 31.343 268 163 8 12 265 10 270 3.01e-30 117
MS.gene09837.t1 AT4G01440 29.954 217 151 1 115 331 3 218 1.09e-29 115
MS.gene09837.t1 AT4G01440 29.954 217 151 1 115 331 3 218 1.09e-29 115
MS.gene09837.t1 AT4G16620 29.118 340 220 7 22 354 20 345 4.67e-29 116
MS.gene09837.t1 AT1G60050 24.793 363 250 7 14 366 13 362 6.40e-29 115
MS.gene09837.t1 AT1G11450 28.571 245 170 4 92 334 2 243 8.10e-28 110
MS.gene09837.t1 AT3G28070 29.864 221 144 4 96 310 99 314 4.02e-27 110
MS.gene09837.t1 AT4G01450 27.801 241 164 4 1 240 1 232 4.36e-27 108
MS.gene09837.t1 AT3G28070 30.660 212 136 4 127 332 1 207 5.30e-26 104
MS.gene09837.t1 AT3G28130 30.516 213 141 3 127 335 1 210 2.92e-25 102
MS.gene09837.t1 AT5G45370 30.337 267 147 7 128 377 74 318 1.27e-24 103
MS.gene09837.t1 AT4G01450 27.511 229 156 4 1 228 1 220 1.91e-24 100
MS.gene09837.t1 AT3G45870 32.911 237 137 9 105 327 31 259 1.97e-24 102
MS.gene09837.t1 AT3G28080 29.245 212 139 5 127 332 1 207 6.14e-24 99.4
MS.gene09837.t1 AT4G16620 29.771 262 164 6 99 354 1 248 2.13e-21 92.8
MS.gene09837.t1 AT4G16620 29.771 262 164 6 99 354 1 248 2.13e-21 92.8
MS.gene09837.t1 AT3G28100 28.631 241 162 5 24 258 24 260 1.05e-19 88.2
MS.gene09837.t1 AT3G45870 32.127 221 128 9 105 311 31 243 1.18e-19 87.8
MS.gene09837.t1 AT3G45870 32.127 221 128 9 105 311 31 243 1.18e-19 87.8
MS.gene09837.t1 AT3G28130 26.141 241 168 4 24 258 23 259 1.81e-18 84.7
MS.gene09837.t1 AT4G01430 26.457 223 150 5 142 358 1 215 6.14e-18 82.4
MS.gene09837.t1 AT4G16620 29.060 234 155 4 22 248 20 249 1.32e-17 82.4
MS.gene09837.t1 AT3G45870 35.971 139 86 3 190 327 47 183 1.93e-16 78.6
MS.gene09837.t1 AT3G28130 30.822 146 97 2 17 160 16 159 1.51e-13 69.7
MS.gene09837.t1 AT3G28100 33.333 138 90 2 24 160 24 160 2.29e-13 69.7

Find 81 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCCAATACTTAATTTATT+TGG 0.079779 7.4:-10140194 MS.gene09837:CDS
AATATTTCATCTTTAATAAT+TGG 0.168330 7.4:+10137820 None:intergenic
TACAGCATGGATATGCTTAT+TGG 0.206605 7.4:-10139853 MS.gene09837:CDS
CCCCACCATTATGTTGGATT+TGG 0.223226 7.4:+10140153 None:intergenic
CATAGTCAAGCAAAGATTAT+TGG 0.266299 7.4:-10140263 MS.gene09837:CDS
TTGAAAGTTGTTACAAATAC+TGG 0.268521 7.4:+10138172 None:intergenic
CTCTCTGTAGTTTGCTTAGC+TGG 0.276190 7.4:+10137796 None:intergenic
AAAATTGACAATGTCATCTT+TGG 0.278598 7.4:+10140973 None:intergenic
GCTGTAGTGTTCTTGCAATT+TGG 0.291587 7.4:-10141213 MS.gene09837:CDS
TTCCAAATAAATTAAGTATT+GGG 0.297256 7.4:+10140192 None:intergenic
CCCACCATTATGTTGGATTT+GGG 0.302702 7.4:+10140154 None:intergenic
TATCATGAGTCCTTTCATTC+TGG 0.312772 7.4:-10138125 MS.gene09837:CDS
TTCTGTTTGGTCTTTGAGTT+GGG 0.319051 7.4:-10139781 MS.gene09837:CDS
TGGCATAGTAGCTTTGATTA+TGG 0.319169 7.4:-10139817 MS.gene09837:CDS
TATAAATTCTGATCAATAAC+TGG 0.339751 7.4:+10140834 None:intergenic
CTTCTGTTTGGTCTTTGAGT+TGG 0.357141 7.4:-10139782 MS.gene09837:CDS
TAGGACTATATTTAGTGGTA+TGG 0.367982 7.4:-10137873 MS.gene09837:CDS
ACAGCATGGATATGCTTATT+GGG 0.380272 7.4:-10139852 MS.gene09837:CDS
ATGGTTATGACATTAATAAA+AGG 0.394183 7.4:-10140215 MS.gene09837:CDS
ATTCCAAATAAATTAAGTAT+TGG 0.410095 7.4:+10140191 None:intergenic
ATAGTCAAGCAAAGATTATT+GGG 0.411157 7.4:-10140262 MS.gene09837:CDS
GGGACAATAGCCACTGTTGC+AGG 0.414076 7.4:-10140242 MS.gene09837:CDS
CACCACTCCTTGGATGTAAT+AGG 0.414142 7.4:+10138210 None:intergenic
AGGACTATATTTAGTGGTAT+GGG 0.420570 7.4:-10137872 MS.gene09837:CDS
TTCTTGCAATTTGGATATGC+TGG 0.425951 7.4:-10141204 MS.gene09837:CDS
CTATGAATGGTTTCCAATTG+TGG 0.427822 7.4:+10141235 None:intergenic
GGATCAATTATGATCACAAT+TGG 0.433877 7.4:-10140107 MS.gene09837:CDS
TGCTTATTGGGAACAGTTGA+AGG 0.435522 7.4:-10139840 MS.gene09837:CDS
AATTAATGAATTACCTTCCA+AGG 0.442387 7.4:+10138089 None:intergenic
TCCTTTGTTCAGTGCAGACT+TGG 0.453275 7.4:+10141167 None:intergenic
GTCATCACTAGCAGCAACTT+TGG 0.456508 7.4:-10137742 MS.gene09837:CDS
CTGAGAAAATTTACCTTGGA+AGG 0.459136 7.4:-10138102 MS.gene09837:intron
AGTAGCTTTGATTATGGAAA+GGG 0.461147 7.4:-10139811 MS.gene09837:CDS
AATCTACAACATGCAGTAAA+GGG 0.462846 7.4:-10140128 MS.gene09837:CDS
ATGCAGGGTATAGTTTGTTC+AGG 0.465326 7.4:-10138238 MS.gene09837:intron
AAATCTACAACATGCAGTAA+AGG 0.469820 7.4:-10140129 MS.gene09837:CDS
AAAGGGGTGAACCTTCTGTT+TGG 0.476797 7.4:-10139794 MS.gene09837:CDS
GATTTACCCCACCATTATGT+TGG 0.479531 7.4:+10140147 None:intergenic
AACCATGGCACCTGCAACAG+TGG 0.484459 7.4:+10140232 None:intergenic
AGTGCCCAAATCCAACATAA+TGG 0.486535 7.4:-10140158 MS.gene09837:CDS
TCATCTTTAATAATTGGACT+TGG 0.486929 7.4:+10137826 None:intergenic
TATATCTCATCACCACTCCT+TGG 0.493961 7.4:+10138200 None:intergenic
GAGTTGGGATACAAAACTCT+TGG 0.507421 7.4:-10139766 MS.gene09837:CDS
AAGTGAAAGCTCAGCAGGAT+AGG 0.515465 7.4:+10139875 None:intergenic
AGCGACGATGACCATGCAAA+GGG 0.522020 7.4:+10138147 None:intergenic
GGGTATAGTTTGTTCAGGAA+TGG 0.526428 7.4:-10138233 MS.gene09837:CDS
GCTGTAAGTGAAAGCTCAGC+AGG 0.529140 7.4:+10139870 None:intergenic
AAGAACACTACAGCTATGAA+TGG 0.530520 7.4:+10141222 None:intergenic
AACTTTCAATCCCCTTTGCA+TGG 0.531606 7.4:-10138158 MS.gene09837:CDS
TCCTGCCATTACCTTTGTCG+TGG 0.536154 7.4:-10140754 MS.gene09837:CDS
CCCAAATCCAACATAATGGT+GGG 0.537030 7.4:-10140154 MS.gene09837:CDS
GCAATTTGGATATGCTGGTA+TGG 0.539407 7.4:-10141199 MS.gene09837:CDS
CTGGCTGAGAAAATTTACCT+TGG 0.545436 7.4:-10138106 MS.gene09837:CDS
ACAAGCCACGACAAAGGTAA+TGG 0.547897 7.4:+10140749 None:intergenic
AGCCACTGTTGCAGGTGCCA+TGG 0.553643 7.4:-10140234 MS.gene09837:CDS
GGACTATATTTAGTGGTATG+GGG 0.570615 7.4:-10137871 MS.gene09837:CDS
GCCACGACAAAGGTAATGGC+AGG 0.571610 7.4:+10140753 None:intergenic
CTGAGCTTTCACTTACAGCA+TGG 0.572956 7.4:-10139866 MS.gene09837:CDS
TAGTAGCTTTGATTATGGAA+AGG 0.576756 7.4:-10139812 MS.gene09837:CDS
GGATACAAAACTCTTGGCTG+CGG 0.586266 7.4:-10139760 MS.gene09837:CDS
TGCTGCTAGTGATGACCTCA+TGG 0.586598 7.4:+10137749 None:intergenic
GCCCAAATCCAACATAATGG+TGG 0.596197 7.4:-10140155 MS.gene09837:CDS
AACGATGACGACGAAGGCAA+CGG 0.602535 7.4:+10141110 None:intergenic
TCCAAGTCTGCACTGAACAA+AGG 0.602707 7.4:-10141168 MS.gene09837:CDS
GGAATGGCCTATTACATCCA+AGG 0.602964 7.4:-10138217 MS.gene09837:CDS
GGAGTGGTGATGAGATATAG+AGG 0.614217 7.4:-10138196 MS.gene09837:CDS
GGCAGGAAGGACATTGAACA+TGG 0.615953 7.4:+10140770 None:intergenic
AAAAGGAACGATGACGACGA+AGG 0.616250 7.4:+10141104 None:intergenic
CGACAAAGGTAATGGCAGGA+AGG 0.624003 7.4:+10140757 None:intergenic
TAGCGACGATGACCATGCAA+AGG 0.630922 7.4:+10138146 None:intergenic
CCAAATCCAACATAATGGTG+GGG 0.635382 7.4:-10140153 MS.gene09837:CDS
GAGAATACAAGCCACGACAA+AGG 0.641879 7.4:+10140743 None:intergenic
TAGTCCTAAAATAATCACAA+TGG 0.643656 7.4:+10137888 None:intergenic
CAACTCAAAGACCAAACAGA+AGG 0.646432 7.4:+10139783 None:intergenic
GTAGCTTTGATTATGGAAAG+GGG 0.650718 7.4:-10139810 MS.gene09837:CDS
GGCCTATTACATCCAAGGAG+TGG 0.668386 7.4:-10138212 MS.gene09837:CDS
TTATTGGGAACAGTTGAAGG+TGG 0.681487 7.4:-10139837 MS.gene09837:CDS
ACTCGAGATGAACAAGTGTG+AGG 0.692112 7.4:-10137712 None:intergenic
TGACGACGAAGGCAACGGCG+TGG 0.712715 7.4:+10141115 None:intergenic
AGAGAAATTTCATAGCCATG+AGG 0.722631 7.4:-10137764 MS.gene09837:CDS
GCGACGATGACCATGCAAAG+GGG 0.738168 7.4:+10138148 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAAAAATATTTTTTTAA+AGG - chr7.4:10139442-10139461 MS.gene09837:intron 0.0%
!! AAAAAAAAAATTGTCAAATT+AGG + chr7.4:10139773-10139792 None:intergenic 10.0%
!! AATATTTCATCTTTAATAAT+TGG + chr7.4:10141158-10141177 None:intergenic 10.0%
!!! AGATTTTTTTTAAGAAAAAA+TGG + chr7.4:10139707-10139726 None:intergenic 10.0%
!!! TAATTTTTTGAAAGTTTAAA+AGG - chr7.4:10139474-10139493 MS.gene09837:intron 10.0%
!!! TTTTTTTTTTTTTTAACATC+TGG - chr7.4:10139873-10139892 MS.gene09837:CDS 10.0%
!! AACACAAAAAACAAAAAAAA+AGG + chr7.4:10140176-10140195 None:intergenic 15.0%
!! ATCTGTTAATTTATTTGTAT+AGG - chr7.4:10139014-10139033 MS.gene09837:intron 15.0%
!! ATTAAATAGTATCAAAATCA+AGG + chr7.4:10138108-10138127 None:intergenic 15.0%
!! ATTCCAAATAAATTAAGTAT+TGG + chr7.4:10138787-10138806 None:intergenic 15.0%
!! TAAAAATCCAATATATTAAG+TGG + chr7.4:10138275-10138294 None:intergenic 15.0%
!! TTCCAAATAAATTAAGTATT+GGG + chr7.4:10138786-10138805 None:intergenic 15.0%
!!! AAAAATCTTCATTTTCAAAT+TGG - chr7.4:10139719-10139738 MS.gene09837:intron 15.0%
!!! ATGATTTTGATTAAATTTTC+AGG - chr7.4:10141054-10141073 MS.gene09837:intron 15.0%
!!! CATAAAGTTTTATACTTATT+AGG - chr7.4:10140965-10140984 MS.gene09837:CDS 15.0%
!!! GATCAGAATTTATATTTTTT+GGG - chr7.4:10138150-10138169 MS.gene09837:CDS 15.0%
!!! TGATCAGAATTTATATTTTT+TGG - chr7.4:10138149-10138168 MS.gene09837:CDS 15.0%
!!! TGATTTTGATTAAATTTTCA+GGG - chr7.4:10141055-10141074 MS.gene09837:intron 15.0%
!! ATATTAGTTGTTAGTATGTT+AGG - chr7.4:10138302-10138321 MS.gene09837:intron 20.0%
!! ATGGTTATGACATTAATAAA+AGG - chr7.4:10138760-10138779 MS.gene09837:intron 20.0%
!! CATTGAATATACACATAATA+TGG - chr7.4:10140234-10140253 MS.gene09837:CDS 20.0%
!! GTAAAAACGTATGATATAAA+CGG + chr7.4:10140025-10140044 None:intergenic 20.0%
!! GTTACTGTATGATTTATTAA+TGG + chr7.4:10140646-10140665 None:intergenic 20.0%
!! TAACAGATTAAACTGTATTA+GGG + chr7.4:10139002-10139021 None:intergenic 20.0%
!! TATAAATTCTGATCAATAAC+TGG + chr7.4:10138144-10138163 None:intergenic 20.0%
!! TATATAGATAAATACTCACT+TGG + chr7.4:10138924-10138943 None:intergenic 20.0%
!! TTAACAGATTAAACTGTATT+AGG + chr7.4:10139003-10139022 None:intergenic 20.0%
!!! ACTATTTAATTTCTTATTGC+AGG - chr7.4:10138118-10138137 MS.gene09837:CDS 20.0%
!!! AGTTTAAAAGGTTTTTTTTG+AGG - chr7.4:10139486-10139505 MS.gene09837:intron 20.0%
!!! AGTTTTATACTTATTAGGAT+AGG - chr7.4:10140970-10140989 MS.gene09837:CDS 20.0%
!!! ATGCTACATTTTTTTTTAAC+AGG - chr7.4:10137970-10137989 MS.gene09837:intron 20.0%
!!! ATTTTTATCAACAGTTTTCA+AGG + chr7.4:10138413-10138432 None:intergenic 20.0%
!!! CTTTTGTCTCTAATTTTTAT+TGG + chr7.4:10138495-10138514 None:intergenic 20.0%
!!! GTTTAAAAGGTTTTTTTTGA+GGG - chr7.4:10139487-10139506 MS.gene09837:intron 20.0%
!!! TAAAAGTTGTTGTTTTGAAA+AGG - chr7.4:10139519-10139538 MS.gene09837:intron 20.0%
!!! TATTTTAGGACTATATTTAG+TGG - chr7.4:10141097-10141116 MS.gene09837:CDS 20.0%
!!! TGCTTGTAATTTTATTAGTA+GGG + chr7.4:10139647-10139666 None:intergenic 20.0%
!!! TTATTCATTTTTAGACAACA+TGG + chr7.4:10138455-10138474 None:intergenic 20.0%
!!! TTTTATTAATGTCATAACCA+TGG + chr7.4:10138761-10138780 None:intergenic 20.0%
!!! TTTTTAAGAAAAAATGGAGA+TGG + chr7.4:10139701-10139720 None:intergenic 20.0%
! AAAATTGACAATGTCATCTT+TGG + chr7.4:10138005-10138024 None:intergenic 25.0%
! AAACATATTCTTCAATTCCA+TGG - chr7.4:10138073-10138092 MS.gene09837:intron 25.0%
! AATTAATGAATTACCTTCCA+AGG + chr7.4:10140889-10140908 None:intergenic 25.0%
! ATACTCTTAAACTTTATCAG+TGG + chr7.4:10139295-10139314 None:intergenic 25.0%
! ATAGTCAAGCAAAGATTATT+GGG - chr7.4:10138713-10138732 MS.gene09837:intron 25.0%
! CTGATTAGTGTAATAATTGA+GGG - chr7.4:10139943-10139962 MS.gene09837:intron 25.0%
! TAGTCCTAAAATAATCACAA+TGG + chr7.4:10141090-10141109 None:intergenic 25.0%
! TCATCTTTAATAATTGGACT+TGG + chr7.4:10141152-10141171 None:intergenic 25.0%
! TCCAATATATTAAGTGGAAA+TGG + chr7.4:10138269-10138288 None:intergenic 25.0%
! TCCATTTCCACTTAATATAT+TGG - chr7.4:10138265-10138284 MS.gene09837:intron 25.0%
! TGATACTAGATTTCATTTGT+TGG - chr7.4:10140096-10140115 MS.gene09837:CDS 25.0%
! TTGAAAGTTGTTACAAATAC+TGG + chr7.4:10140806-10140825 None:intergenic 25.0%
!! ATATTTCTGTAGTTAAAACC+TGG + chr7.4:10140260-10140279 None:intergenic 25.0%
!! ATTGTCAATTTTTATGAAGC+TGG - chr7.4:10138013-10138032 MS.gene09837:intron 25.0%
!! CAATGAAACAATCTTTTAAC+AGG - chr7.4:10140454-10140473 MS.gene09837:intron 25.0%
!! CATTTTTATCTTCTCAATTC+TGG + chr7.4:10138683-10138702 None:intergenic 25.0%
!! GTGCTTGTAATTTTATTAGT+AGG + chr7.4:10139648-10139667 None:intergenic 25.0%
!!! TAATAATTGAGGGTATCATA+CGG - chr7.4:10139953-10139972 MS.gene09837:intron 25.0%
!!! TCAGTTATGTGTTTTGTTTT+GGG + chr7.4:10140929-10140948 None:intergenic 25.0%
!!! TGAGTTATTTTGGACAATTA+TGG + chr7.4:10140488-10140507 None:intergenic 25.0%
!!! TTCAGTTATGTGTTTTGTTT+TGG + chr7.4:10140930-10140949 None:intergenic 25.0%
!!! TTTTTTTAACATCTGGTTCT+AGG - chr7.4:10139880-10139899 MS.gene09837:CDS 25.0%
AAATCTACAACATGCAGTAA+AGG - chr7.4:10138846-10138865 MS.gene09837:intron 30.0%
AATATACACATAATATGGCC+AGG - chr7.4:10140239-10140258 MS.gene09837:CDS 30.0%
AATCTACAACATGCAGTAAA+GGG - chr7.4:10138847-10138866 MS.gene09837:intron 30.0%
ACCAAAAAAGTTTCCACAAT+TGG - chr7.4:10137727-10137746 MS.gene09837:CDS 30.0%
AGGACTATATTTAGTGGTAT+GGG - chr7.4:10141103-10141122 MS.gene09837:CDS 30.0%
AGTCTATTCAATTCAGATGT+TGG + chr7.4:10140135-10140154 None:intergenic 30.0%
ATCTTTAATTGTTCACATGC+AGG - chr7.4:10140721-10140740 MS.gene09837:intron 30.0%
CAATTGAACCAAAGAAAACA+AGG + chr7.4:10140047-10140066 None:intergenic 30.0%
CATAGTCAAGCAAAGATTAT+TGG - chr7.4:10138712-10138731 MS.gene09837:intron 30.0%
CCTCAATTATTACACTAATC+AGG + chr7.4:10139945-10139964 None:intergenic 30.0%
CCTGATTAGTGTAATAATTG+AGG - chr7.4:10139942-10139961 MS.gene09837:intron 30.0%
CTTATTAGGATAGGATTGAT+TGG - chr7.4:10140979-10140998 MS.gene09837:CDS 30.0%
GGATCAATTATGATCACAAT+TGG - chr7.4:10138868-10138887 MS.gene09837:intron 30.0%
GGCCCAATACTTAATTTATT+TGG - chr7.4:10138781-10138800 MS.gene09837:intron 30.0%
TAGGACTATATTTAGTGGTA+TGG - chr7.4:10141102-10141121 MS.gene09837:CDS 30.0%
TATCATACGGTGAAGATTAA+CGG - chr7.4:10139966-10139985 MS.gene09837:intron 30.0%
TCATTGAGCACTAATAGAAA+CGG - chr7.4:10139670-10139689 MS.gene09837:intron 30.0%
TCTTTAATTGTTCACATGCA+GGG - chr7.4:10140722-10140741 MS.gene09837:intron 30.0%
TGTCTGTAATCATTACTGTA+TGG + chr7.4:10140289-10140308 None:intergenic 30.0%
TTATATGTTCGTGCTTCATA+AGG - chr7.4:10140570-10140589 MS.gene09837:intron 30.0%
TTCATGTATACACAAACAAG+AGG + chr7.4:10137930-10137949 None:intergenic 30.0%
! AATCAAGGTAAGTTTTTCCA+TGG + chr7.4:10138093-10138112 None:intergenic 30.0%
! CGGTAAAAGGTTTTTATTGA+CGG - chr7.4:10141002-10141021 MS.gene09837:intron 30.0%
! CGTCTCTAATTTTATCGATA+AGG + chr7.4:10138545-10138564 None:intergenic 30.0%
! TAGATGTATTGATCAAAAGG+TGG + chr7.4:10139272-10139291 None:intergenic 30.0%
! TGGTAGATGTATTGATCAAA+AGG + chr7.4:10139275-10139294 None:intergenic 30.0%
!! AGTAGCTTTGATTATGGAAA+GGG - chr7.4:10139164-10139183 MS.gene09837:intron 30.0%
!! GAGAGTCTTATGAGTTATTT+TGG + chr7.4:10140498-10140517 None:intergenic 30.0%
!! GATTAAATTTTCAGGGTGAT+TGG - chr7.4:10141062-10141081 MS.gene09837:intron 30.0%
!! TAGTAGCTTTGATTATGGAA+AGG - chr7.4:10139163-10139182 MS.gene09837:intron 30.0%
!! TTTCATTGATTCTAGACTTG+TGG + chr7.4:10140442-10140461 None:intergenic 30.0%
!!! CATTTTCAAATTGGCTTGTT+GGG - chr7.4:10139728-10139747 MS.gene09837:intron 30.0%
!!! CGTTTTTACCTTGTTTTCTT+TGG - chr7.4:10140036-10140055 MS.gene09837:intron 30.0%
!!! TCATTTTCAAATTGGCTTGT+TGG - chr7.4:10139727-10139746 MS.gene09837:intron 30.0%
!!! TCCAATTGTGGAAACTTTTT+TGG + chr7.4:10137731-10137750 None:intergenic 30.0%
!!! TTTTCTAAGATCACTGCAAA+AGG + chr7.4:10137891-10137910 None:intergenic 30.0%
AAGAACACTACAGCTATGAA+TGG + chr7.4:10137756-10137775 None:intergenic 35.0%
AATTGTCAAATTAGGTCGTC+CGG + chr7.4:10139765-10139784 None:intergenic 35.0%
ACAGCATGGATATGCTTATT+GGG - chr7.4:10139123-10139142 MS.gene09837:intron 35.0%
AGAGAAATTTCATAGCCATG+AGG - chr7.4:10141211-10141230 MS.gene09837:CDS 35.0%
ATAACACTTCTGTTTCCATG+AGG + chr7.4:10140554-10140573 None:intergenic 35.0%
ATTAGGATAGGATTGATTGG+CGG - chr7.4:10140982-10141001 MS.gene09837:CDS 35.0%
CTATGAATGGTTTCCAATTG+TGG + chr7.4:10137743-10137762 None:intergenic 35.0%
CTGAGAAAATTTACCTTGGA+AGG - chr7.4:10140873-10140892 MS.gene09837:intron 35.0%
GCATCAAGTGATGATACAAA+AGG + chr7.4:10139993-10140012 None:intergenic 35.0%
GGACTATATTTAGTGGTATG+GGG - chr7.4:10141104-10141123 MS.gene09837:CDS 35.0%
TACAGCATGGATATGCTTAT+TGG - chr7.4:10139122-10139141 MS.gene09837:intron 35.0%
TATCATGAGTCCTTTCATTC+TGG - chr7.4:10140850-10140869 MS.gene09837:intron 35.0%
TTACCAGTAGAGATTAGAGA+CGG + chr7.4:10138582-10138601 None:intergenic 35.0%
TTCTTGCAATTTGGATATGC+TGG - chr7.4:10137771-10137790 MS.gene09837:CDS 35.0%
! ATTGATTCTAGACTTGTGGT+AGG + chr7.4:10140438-10140457 None:intergenic 35.0%
! ATTTTCTCAGCCAGAATGAA+AGG + chr7.4:10140863-10140882 None:intergenic 35.0%
! GTCAATTTTTATGAAGCTGG+TGG - chr7.4:10138016-10138035 MS.gene09837:intron 35.0%
! TCAATTCAGATGTTGGTTGT+TGG + chr7.4:10140128-10140147 None:intergenic 35.0%
! TTCTGTTTGGTCTTTGAGTT+GGG - chr7.4:10139194-10139213 MS.gene09837:intron 35.0%
!! GTAACCTAAATTTTGACGAG+AGG - chr7.4:10139917-10139936 MS.gene09837:intron 35.0%
!! GTAGCTTTGATTATGGAAAG+GGG - chr7.4:10139165-10139184 MS.gene09837:intron 35.0%
!! TGGCATAGTAGCTTTGATTA+TGG - chr7.4:10139158-10139177 MS.gene09837:intron 35.0%
AACACTTGGACAAAACCTCA+TGG - chr7.4:10140536-10140555 MS.gene09837:intron 40.0%
AACTTTCAATCCCCTTTGCA+TGG - chr7.4:10140817-10140836 MS.gene09837:CDS 40.0%
ACTCATAAGACTCTCAGTGT+CGG - chr7.4:10140503-10140522 MS.gene09837:intron 40.0%
AGAGTTTGAGAAAGAGATCC+AGG + chr7.4:10138348-10138367 None:intergenic 40.0%
AGTGCCCAAATCCAACATAA+TGG - chr7.4:10138817-10138836 MS.gene09837:intron 40.0%
ATTGTCAAATTAGGTCGTCC+GGG + chr7.4:10139764-10139783 None:intergenic 40.0%
CAACTCAAAGACCAAACAGA+AGG + chr7.4:10139195-10139214 None:intergenic 40.0%
CCAAATCCAACATAATGGTG+GGG - chr7.4:10138822-10138841 MS.gene09837:intron 40.0%
CCCAAATCCAACATAATGGT+GGG - chr7.4:10138821-10138840 MS.gene09837:intron 40.0%
CCCACCATTATGTTGGATTT+GGG + chr7.4:10138824-10138843 None:intergenic 40.0%
CTGGCTGAGAAAATTTACCT+TGG - chr7.4:10140869-10140888 MS.gene09837:intron 40.0%
GAGTTGGGATACAAAACTCT+TGG - chr7.4:10139209-10139228 MS.gene09837:intron 40.0%
GAGTTTGAGAAAGAGATCCA+GGG + chr7.4:10138347-10138366 None:intergenic 40.0%
GATTTACCCCACCATTATGT+TGG + chr7.4:10138831-10138850 None:intergenic 40.0%
GCAATTTGGATATGCTGGTA+TGG - chr7.4:10137776-10137795 MS.gene09837:CDS 40.0%
GCTGTAGTGTTCTTGCAATT+TGG - chr7.4:10137762-10137781 MS.gene09837:CDS 40.0%
GGTACCTCTCGTCAAAATTT+AGG + chr7.4:10139924-10139943 None:intergenic 40.0%
GTAGGCATATTGGAATGGAT+TGG + chr7.4:10140420-10140439 None:intergenic 40.0%
TAGACTTGTGGTAGGCATAT+TGG + chr7.4:10140430-10140449 None:intergenic 40.0%
TAGGATTGATTGGCGGTAAA+AGG - chr7.4:10140989-10141008 MS.gene09837:intron 40.0%
TATATCTCATCACCACTCCT+TGG + chr7.4:10140778-10140797 None:intergenic 40.0%
TGCTAGAGTAATTCTCTGCA+TGG - chr7.4:10138048-10138067 MS.gene09837:intron 40.0%
TGCTTATTGGGAACAGTTGA+AGG - chr7.4:10139135-10139154 MS.gene09837:intron 40.0%
TTATTGGGAACAGTTGAAGG+TGG - chr7.4:10139138-10139157 MS.gene09837:intron 40.0%
TTCGTGCTTCATAAGGTTTC+AGG - chr7.4:10140577-10140596 MS.gene09837:intron 40.0%
TTGTGGTAGGCATATTGGAA+TGG + chr7.4:10140425-10140444 None:intergenic 40.0%
TTTCCGTCTCTAATCTCTAC+TGG - chr7.4:10138576-10138595 MS.gene09837:intron 40.0%
! CTTCTGTTTGGTCTTTGAGT+TGG - chr7.4:10139193-10139212 MS.gene09837:intron 40.0%
! GGCGCCATTGTGATTATTTT+AGG - chr7.4:10141083-10141102 MS.gene09837:intron 40.0%
!! ATGAGGTTTTGTCCAAGTGT+TGG + chr7.4:10140537-10140556 None:intergenic 40.0%
!! ATGCAGGGTATAGTTTGTTC+AGG - chr7.4:10140737-10140756 MS.gene09837:intron 40.0%
!! GGGTATAGTTTGTTCAGGAA+TGG - chr7.4:10140742-10140761 MS.gene09837:CDS 40.0%
AAAAGGAACGATGACGACGA+AGG + chr7.4:10137874-10137893 None:intergenic 45.0%
AAAGGGGTGAACCTTCTGTT+TGG - chr7.4:10139181-10139200 MS.gene09837:intron 45.0%
AAGTGAAAGCTCAGCAGGAT+AGG + chr7.4:10139103-10139122 None:intergenic 45.0%
ACAAGCCACGACAAAGGTAA+TGG + chr7.4:10138229-10138248 None:intergenic 45.0%
AGTAGTCACGATTTGAACCC+TGG - chr7.4:10138327-10138346 MS.gene09837:intron 45.0%
CACCACTCCTTGGATGTAAT+AGG + chr7.4:10140768-10140787 None:intergenic 45.0%
CCCCACCATTATGTTGGATT+TGG + chr7.4:10138825-10138844 None:intergenic 45.0%
CTGAGCTTTCACTTACAGCA+TGG - chr7.4:10139109-10139128 MS.gene09837:intron 45.0%
GACACAAGACAGAACAGACA+CGG + chr7.4:10140372-10140391 None:intergenic 45.0%
GAGAATACAAGCCACGACAA+AGG + chr7.4:10138235-10138254 None:intergenic 45.0%
GCCCAAATCCAACATAATGG+TGG - chr7.4:10138820-10138839 MS.gene09837:intron 45.0%
GGAATGGCCTATTACATCCA+AGG - chr7.4:10140758-10140777 MS.gene09837:CDS 45.0%
GGATACAAAACTCTTGGCTG+CGG - chr7.4:10139215-10139234 MS.gene09837:intron 45.0%
GTCATCACTAGCAGCAACTT+TGG - chr7.4:10141233-10141252 MS.gene09837:CDS 45.0%
TAACTCAACCACTTGAGCCA+CGG - chr7.4:10138379-10138398 MS.gene09837:intron 45.0%
TCCAAGTCTGCACTGAACAA+AGG - chr7.4:10137807-10137826 MS.gene09837:CDS 45.0%
TCCTTTGTTCAGTGCAGACT+TGG + chr7.4:10137811-10137830 None:intergenic 45.0%
TCGGAAATGCTTCCAACACT+TGG - chr7.4:10140522-10140541 MS.gene09837:intron 45.0%
! ACTTGCTTCCACCAGGTTTT+GGG + chr7.4:10139355-10139374 None:intergenic 45.0%
! CTTCAAAACTTGCTTCCACC+AGG + chr7.4:10139362-10139381 None:intergenic 45.0%
! GGAGTGGTGATGAGATATAG+AGG - chr7.4:10140779-10140798 MS.gene09837:CDS 45.0%
!! AACTTGCTTCCACCAGGTTT+TGG + chr7.4:10139356-10139375 None:intergenic 45.0%
!! CTCTCTGTAGTTTGCTTAGC+TGG + chr7.4:10141182-10141201 None:intergenic 45.0%
!! CTGGTGGAAGCAAGTTTTGA+AGG - chr7.4:10139360-10139379 MS.gene09837:intron 45.0%
!!! CAGGTTTTGGGTGTTAGTGT+GGG + chr7.4:10139343-10139362 None:intergenic 45.0%
AACGATGACGACGAAGGCAA+CGG + chr7.4:10137868-10137887 None:intergenic 50.0%
AGCGACGATGACCATGCAAA+GGG + chr7.4:10140831-10140850 None:intergenic 50.0%
CACTAACACCCAAAACCTGG+TGG - chr7.4:10139344-10139363 MS.gene09837:intron 50.0%
CCACACTAACACCCAAAACC+TGG - chr7.4:10139341-10139360 MS.gene09837:intron 50.0%
GCTGTAAGTGAAAGCTCAGC+AGG + chr7.4:10139108-10139127 None:intergenic 50.0%
GGCAGGAAGGACATTGAACA+TGG + chr7.4:10138208-10138227 None:intergenic 50.0%
GGCCTATTACATCCAAGGAG+TGG - chr7.4:10140763-10140782 MS.gene09837:CDS 50.0%
TAGCGACGATGACCATGCAA+AGG + chr7.4:10140832-10140851 None:intergenic 50.0%
TCCTGCCATTACCTTTGTCG+TGG - chr7.4:10138221-10138240 MS.gene09837:CDS 50.0%
TGCTGCTAGTGATGACCTCA+TGG + chr7.4:10141229-10141248 None:intergenic 50.0%
! CGACAAAGGTAATGGCAGGA+AGG + chr7.4:10138221-10138240 None:intergenic 50.0%
!!! CCAGGTTTTGGGTGTTAGTG+TGG + chr7.4:10139344-10139363 None:intergenic 50.0%
AACCATGGCACCTGCAACAG+TGG + chr7.4:10138746-10138765 None:intergenic 55.0%
GCGACGATGACCATGCAAAG+GGG + chr7.4:10140830-10140849 None:intergenic 55.0%
GGGACAATAGCCACTGTTGC+AGG - chr7.4:10138733-10138752 MS.gene09837:intron 55.0%
TTGTTGGGCCAAGTCATGCC+CGG - chr7.4:10139743-10139762 MS.gene09837:intron 55.0%
! GCCACGACAAAGGTAATGGC+AGG + chr7.4:10138225-10138244 None:intergenic 55.0%
!! TTTTCAAGGCGTAGCAGCCG+TGG + chr7.4:10138399-10138418 None:intergenic 55.0%
AGCCACTGTTGCAGGTGCCA+TGG - chr7.4:10138741-10138760 MS.gene09837:intron 60.0%
TAGGTCGTCCGGGCATGACT+TGG + chr7.4:10139754-10139773 None:intergenic 60.0%
CGTAGCAGCCGTGGCTCAAG+TGG + chr7.4:10138390-10138409 None:intergenic 65.0%
TGACGACGAAGGCAACGGCG+TGG + chr7.4:10137863-10137882 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 10137714 10141283 10137714 ID=MS.gene09837
chr7.4 mRNA 10137714 10141283 10137714 ID=MS.gene09837.t1;Parent=MS.gene09837
chr7.4 exon 10141087 10141283 10141087 ID=MS.gene09837.t1.exon1;Parent=MS.gene09837.t1
chr7.4 CDS 10141087 10141283 10141087 ID=cds.MS.gene09837.t1;Parent=MS.gene09837.t1
chr7.4 exon 10140943 10141005 10140943 ID=MS.gene09837.t1.exon2;Parent=MS.gene09837.t1
chr7.4 CDS 10140943 10141005 10140943 ID=cds.MS.gene09837.t1;Parent=MS.gene09837.t1
chr7.4 exon 10140741 10140857 10140741 ID=MS.gene09837.t1.exon3;Parent=MS.gene09837.t1
chr7.4 CDS 10140741 10140857 10140741 ID=cds.MS.gene09837.t1;Parent=MS.gene09837.t1
chr7.4 exon 10140073 10140313 10140073 ID=MS.gene09837.t1.exon4;Parent=MS.gene09837.t1
chr7.4 CDS 10140073 10140313 10140073 ID=cds.MS.gene09837.t1;Parent=MS.gene09837.t1
chr7.4 exon 10139752 10139913 10139752 ID=MS.gene09837.t1.exon5;Parent=MS.gene09837.t1
chr7.4 CDS 10139752 10139913 10139752 ID=cds.MS.gene09837.t1;Parent=MS.gene09837.t1
chr7.4 exon 10138103 10138254 10138103 ID=MS.gene09837.t1.exon6;Parent=MS.gene09837.t1
chr7.4 CDS 10138103 10138254 10138103 ID=cds.MS.gene09837.t1;Parent=MS.gene09837.t1
chr7.4 exon 10137714 10137921 10137714 ID=MS.gene09837.t1.exon7;Parent=MS.gene09837.t1
chr7.4 CDS 10137714 10137921 10137714 ID=cds.MS.gene09837.t1;Parent=MS.gene09837.t1
Gene Sequence

>MS.gene09837

ATGGCATTTTGTAACCAAAAAAGTTTCCACAATTGGAAACCATTCATAGCTGTAGTGTTCTTGCAATTTGGATATGCTGGTATGGATATTCTGTCCAAGTCTGCACTGAACAAAGGAATGAGCAATTATGTACTAGTCGTTTATCGCCACGCCGTTGCCTTCGTCGTCATCGTTCCTTTTGCAGTGATCTTAGAAAAGTATTGTTTACATTCTCCTCTTGTTTGTGTATACATGAATTTGAATTGAAGTAATTGATATGCTACATTTTTTTTTAACAGGAAAGTAAGACCAAAGATGACATTGTCAATTTTTATGAAGCTGGTGGCTCTCAGTGTGCTAGAGTAATTCTCTGCATGGTTAAACATATTCTTCAATTCCATGGAAAAACTTACCTTGATTTTGATACTATTTAATTTCTTATTGCAGGCCAGTTATTGATCAGAATTTATATTTTTTGGGAATGAAGTATACAACAGCTACTTTTGCAGTTGCCATGTTCAATGTCCTTCCTGCCATTACCTTTGTCGTGGCTTGTATTCTCAAGTAACATTTCCATTTCCACTTAATATATTGGATTTTTATATGCAAATATTAGTTGTTAGTATGTTAGGTTAGTAGTCACGATTTGAACCCTGGATCTCTTTCTCAAACTCTTTCGAGCGTTCTAACTCAACCACTTGAGCCACGGCTGCTACGCCTTGAAAACTGTTGATAAAAATTAAATAGACACATAGTACTCCATGTTGTCTAAAAATGAATAAGTTAGAAAGTTAAATTACCAATAAAAATTAGAGACAAAAGAATATCTATAAATTTAACATCTCTAATCCTTATCGATAAAATTAGAGACGAATATTATTCTTTTCCGTCTCTAATCTCTACTGGTAATTCATTATTACTTTTAGTAGTGAGAAATATTTGCTATTTTTTAGTACATTTAGTAATTTAACTAATTGCTAATTGTGTCCAGAATTGAGAAGATAAAAATGAAAAGTGTGCATAGTCAAGCAAAGATTATTGGGACAATAGCCACTGTTGCAGGTGCCATGGTTATGACATTAATAAAAGGCCCAATACTTAATTTATTTGGAATACATGAAAGCAGTGCCCAAATCCAACATAATGGTGGGGTAAATCTACAACATGCAGTAAAGGGATCAATTATGATCACAATTGGCTGTTTTAGTTGTGCTTGTTTCACAATTCTCCAAGTGAGTATTTATCTATATAAAATAATCTAATTTTTTTTTTCTTTTTCTTTCTTTCAATTTTGTGCATTTCTATTCCCTAATACAGTTTAATCTGTTAATTTATTTGTATAGGCATTTCTATTCCCTAATACAGTTTAATCTGTTAATTTATTTGTATAGGCTGTTACACTTGAAACCTATCCTGCTGAGCTTTCACTTACAGCATGGATATGCTTATTGGGAACAGTTGAAGGTGGCATAGTAGCTTTGATTATGGAAAGGGGTGAACCTTCTGTTTGGTCTTTGAGTTGGGATACAAAACTCTTGGCTGCGGTTTATAGTGTAAGTTATTGCGAACACAATCACCACCTTTTGATCAATACATCTACCACTGATAAAGTTTAAGAGTATTTAATTAAGTCATTAAAAGTTAAAGCCCACACTAACACCCAAAACCTGGTGGAAGCAAGTTTTGAAGGCTACATAATAAAAAGAGAAACGCTAATATGTGTTTTTATGAGACATGTTAAATAATCTAATATAAAAATATTTTTTTAAAGGTCACATATTTAATTTTTTGAAAGTTTAAAAGGTTTTTTTTGAGGGATCAAAGTTTAAAAGTTGTTGTTTTGAAAAGGTCACGTATTTAATTTTTTAAAAGTTTAAAAGTTGTTGTTTTGAATACAAAAAATTTACATTTAGATTTTTTAACACGTAGCTTGAGACACAAGTTAACGAAACCCTACTAATAAAATTACAAGCACATTCATTGAGCACTAATAGAAACGGACACACCATCTCCATTTTTTCTTAAAAAAAATCTTCATTTTCAAATTGGCTTGTTGGGCCAAGTCATGCCCGGACGACCTAATTTGACAATTTTTTTTTTTATTTTTTCTTAAAAAAAATCTTCATTTTCAAATTGGCTTGTTGGGCCAAGTCATGCCCGGACGACCTAATTTGACAATTTTTTTTTTTTTTTTAACATCTGGTTCTAGGAAAAATATGTTTACGTAACCTAAATTTTGACGAGAGGTACCTGATTAGTGTAATAATTGAGGGTATCATACGGTGAAGATTAACGGTCCTTTTGTATCATCACTTGATGCATCAATATACCGTTTATATCATACGTTTTTACCTTGTTTTCTTTGGTTCAATTGTTACTCATTGAATTAATTGAACAAATGAGTGATACTAGATTTCATTTGTTGGATTAATCCAACAACCAACATCTGAATTGAATAGACTTGCAAAGACATTTATTATCCTTTTTTTTTGTTTTTTGTGTTTTACACACTTATTCTTCTACGTAACAGACATGTGCATACATTGAATATACACATAATATGGCCAGGTTTTAACTACAGAAATATAAGTATCCATACAGTAATGATTACAGACAAATATCTAAAGCTATCTTTGTCAAAAGTTACTAATAAACAAACTGAAAATGTTTATTGAGCCGTGTCTGTTCTGTCTTGTGTCAACTTCACAAGTGTGATCTCAGTGTCCAATCCATTCCAATATGCCTACCACAAGTCTAGAATCAATGAAACAATCTTTTAACAGGACACTTGACCATAATTGTCCAAAATAACTCATAAGACTCTCAGTGTCGGAAATGCTTCCAACACTTGGACAAAACCTCATGGAAACAGAAGTGTTATATGTTCGTGCTTCATAAGGTTTCAGGTTTATAATAGAAAACGTATTAATAGATTGCTTGATCAACATTGCCATTAATAAATCATACAGTAACTGCAACATAATGTGATTATCTATCTTTGACAGAAAAAATTCAAATAATAACTACTATCTTTAATTGTTCACATGCAGGGTATAGTTTGTTCAGGAATGGCCTATTACATCCAAGGAGTGGTGATGAGATATAGAGGTCCAGTATTTGTAACAACTTTCAATCCCCTTTGCATGGTCATCGTCGCTATCATGAGTCCTTTCATTCTGGCTGAGAAAATTTACCTTGGAAGGTAATTCATTAATTAATCATGAAAATAAAGTCCCAAAACAAAACACATAACTGAATTATAAGTACTCACTCATAAAGTTTTATACTTATTAGGATAGGATTGATTGGCGGTAAAAGGTTTTTATTGACGGTGTATATAAATTAAATTCGTAAACTAACAATGATTTTGATTAAATTTTCAGGGTGATTGGCGCCATTGTGATTATTTTAGGACTATATTTAGTGGTATGGGGTAAAAGCAAAGATTATGACACACCAAGTCCAATTATTAAAGATGAAATATTACCAGCTAAGCAAACTACAGAGAGCAACGACAAAGAGAAATTTCATAGCCATGAGGTCATCACTAGCAGCAACTTTGGTGCAATAACTCGAGATGAACAAGTGTGA
Protein sequence

>MS.gene09837.t1

MAFCNQKSFHNWKPFIAVVFLQFGYAGMDILSKSALNKGMSNYVLVVYRHAVAFVVIVPFAVILEKKVRPKMTLSIFMKLVALSVLEPVIDQNLYFLGMKYTTATFAVAMFNVLPAITFVVACILKIEKIKMKSVHSQAKIIGTIATVAGAMVMTLIKGPILNLFGIHESSAQIQHNGGVNLQHAVKGSIMITIGCFSCACFTILQAVTLETYPAELSLTAWICLLGTVEGGIVALIMERGEPSVWSLSWDTKLLAAVYSGIVCSGMAYYIQGVVMRYRGPVFVTTFNPLCMVIVAIMSPFILAEKIYLGRVIGAIVIILGLYLVVWGKSKDYDTPSPIIKDEILPAKQTTESNDKEKFHSHEVITSSNFGAITRDEQV