Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009041.t1 | AET03213.1 | 83.7 | 289 | 32 | 1 | 23 | 311 | 45 | 318 | 2.00E-136 | 495.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009041.t1 | Q9M1V2 | 53.3 | 289 | 135 | 0 | 23 | 311 | 35 | 323 | 4.6e-89 | 329.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009041.t1 | G7LG99 | 83.7 | 289 | 32 | 1 | 23 | 311 | 45 | 318 | 1.4e-136 | 495.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene55382 | MS.gene009041 | PPI |
MS.gene53169 | MS.gene009041 | PPI |
MS.gene99693 | MS.gene009041 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009041.t1 | MTR_8g066210 | 83.737 | 289 | 32 | 1 | 23 | 311 | 45 | 318 | 3.48e-177 | 492 |
MS.gene009041.t1 | MTR_3g435130 | 77.931 | 290 | 63 | 1 | 23 | 311 | 45 | 334 | 2.28e-171 | 478 |
MS.gene009041.t1 | MTR_8g066220 | 77.509 | 289 | 65 | 0 | 23 | 311 | 45 | 333 | 4.63e-171 | 478 |
MS.gene009041.t1 | MTR_0071s0010 | 71.724 | 290 | 81 | 1 | 23 | 311 | 44 | 333 | 2.21e-157 | 443 |
MS.gene009041.t1 | MTR_3g046670 | 71.724 | 290 | 81 | 1 | 23 | 311 | 44 | 333 | 2.21e-157 | 443 |
MS.gene009041.t1 | MTR_8g066280 | 80.319 | 188 | 37 | 0 | 124 | 311 | 22 | 209 | 8.87e-110 | 317 |
MS.gene009041.t1 | MTR_7g007710 | 48.544 | 309 | 153 | 4 | 8 | 311 | 25 | 332 | 7.90e-108 | 317 |
MS.gene009041.t1 | MTR_3g013500 | 50.000 | 296 | 146 | 1 | 18 | 311 | 42 | 337 | 1.24e-107 | 317 |
MS.gene009041.t1 | MTR_8g040820 | 46.416 | 293 | 153 | 3 | 23 | 311 | 52 | 344 | 1.27e-102 | 304 |
MS.gene009041.t1 | MTR_7g007680 | 47.078 | 308 | 154 | 5 | 8 | 311 | 31 | 333 | 1.06e-101 | 303 |
MS.gene009041.t1 | MTR_3g434790 | 71.875 | 192 | 54 | 0 | 120 | 311 | 43 | 234 | 4.61e-99 | 291 |
MS.gene009041.t1 | MTR_8g040430 | 46.758 | 293 | 152 | 2 | 23 | 311 | 53 | 345 | 3.13e-98 | 293 |
MS.gene009041.t1 | MTR_8g035720 | 46.599 | 294 | 152 | 3 | 23 | 311 | 113 | 406 | 2.38e-97 | 293 |
MS.gene009041.t1 | MTR_8g040490 | 44.863 | 292 | 158 | 2 | 23 | 311 | 52 | 343 | 1.99e-96 | 290 |
MS.gene009041.t1 | MTR_8g040520 | 48.958 | 288 | 140 | 4 | 23 | 306 | 52 | 336 | 7.61e-93 | 280 |
MS.gene009041.t1 | MTR_8g041790 | 47.584 | 269 | 136 | 4 | 47 | 311 | 58 | 325 | 3.73e-90 | 272 |
MS.gene009041.t1 | MTR_8g040250 | 49.012 | 253 | 121 | 5 | 63 | 311 | 45 | 293 | 2.88e-84 | 256 |
MS.gene009041.t1 | MTR_8g014380 | 43.494 | 269 | 113 | 4 | 22 | 289 | 51 | 281 | 5.25e-77 | 237 |
MS.gene009041.t1 | MTR_8g040820 | 45.662 | 219 | 115 | 3 | 97 | 311 | 27 | 245 | 9.25e-72 | 222 |
MS.gene009041.t1 | MTR_8g040430 | 46.575 | 219 | 113 | 2 | 97 | 311 | 27 | 245 | 2.00e-68 | 214 |
MS.gene009041.t1 | MTR_8g040710 | 49.660 | 147 | 72 | 1 | 155 | 299 | 134 | 280 | 2.49e-45 | 155 |
MS.gene009041.t1 | MTR_8g040730 | 49.721 | 179 | 82 | 5 | 56 | 229 | 39 | 214 | 1.06e-44 | 159 |
MS.gene009041.t1 | MTR_8g040730 | 48.507 | 134 | 64 | 3 | 23 | 154 | 366 | 496 | 1.83e-33 | 129 |
MS.gene009041.t1 | MTR_8g066190 | 66.972 | 109 | 18 | 1 | 203 | 311 | 2 | 92 | 8.45e-42 | 140 |
MS.gene009041.t1 | MTR_8g040315 | 45.238 | 126 | 68 | 1 | 186 | 311 | 8 | 132 | 5.83e-29 | 108 |
MS.gene009041.t1 | MTR_8g066200 | 83.333 | 36 | 6 | 0 | 129 | 164 | 25 | 60 | 7.67e-16 | 71.2 |
MS.gene009041.t1 | MTR_8g040410 | 34.831 | 89 | 40 | 1 | 195 | 283 | 75 | 145 | 8.70e-13 | 65.1 |
MS.gene009041.t1 | MTR_8g040410 | 45.000 | 60 | 31 | 1 | 44 | 101 | 21 | 80 | 1.35e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009041.t1 | AT3G45070 | 53.793 | 290 | 132 | 2 | 23 | 311 | 40 | 328 | 5.48e-110 | 322 |
MS.gene009041.t1 | AT3G45070 | 53.793 | 290 | 132 | 2 | 23 | 311 | 35 | 323 | 6.03e-110 | 322 |
MS.gene009041.t1 | AT3G45070 | 53.793 | 290 | 132 | 2 | 23 | 311 | 67 | 355 | 1.20e-109 | 323 |
MS.gene009041.t1 | AT5G07010 | 48.973 | 292 | 146 | 2 | 22 | 311 | 66 | 356 | 1.51e-105 | 312 |
MS.gene009041.t1 | AT3G45080 | 52.577 | 291 | 135 | 3 | 23 | 311 | 40 | 329 | 1.45e-102 | 303 |
MS.gene009041.t1 | AT2G03770 | 50.709 | 282 | 131 | 1 | 23 | 304 | 42 | 315 | 2.39e-100 | 298 |
MS.gene009041.t1 | AT2G03760 | 51.034 | 290 | 135 | 3 | 23 | 311 | 41 | 324 | 7.66e-100 | 296 |
MS.gene009041.t1 | AT5G07000 | 48.299 | 294 | 147 | 3 | 22 | 311 | 52 | 344 | 9.05e-100 | 297 |
MS.gene009041.t1 | AT1G13420 | 51.546 | 291 | 134 | 4 | 23 | 311 | 46 | 331 | 8.77e-99 | 294 |
MS.gene009041.t1 | AT5G43690 | 48.805 | 293 | 145 | 3 | 23 | 311 | 40 | 331 | 1.47e-95 | 286 |
MS.gene009041.t1 | AT4G26280 | 49.485 | 291 | 127 | 2 | 16 | 304 | 30 | 302 | 2.21e-92 | 277 |
MS.gene009041.t1 | AT1G28170 | 50.515 | 291 | 140 | 4 | 23 | 311 | 38 | 326 | 7.75e-92 | 276 |
MS.gene009041.t1 | AT2G14920 | 46.259 | 294 | 151 | 3 | 23 | 311 | 42 | 333 | 1.11e-91 | 276 |
MS.gene009041.t1 | AT2G03750 | 48.097 | 289 | 148 | 2 | 23 | 311 | 64 | 350 | 2.07e-90 | 273 |
MS.gene009041.t1 | AT1G18590 | 44.027 | 293 | 152 | 5 | 23 | 309 | 55 | 341 | 6.19e-85 | 259 |
MS.gene009041.t1 | AT1G13430 | 44.951 | 307 | 150 | 3 | 23 | 311 | 46 | 351 | 7.66e-84 | 256 |
MS.gene009041.t1 | AT1G74100 | 41.980 | 293 | 158 | 4 | 23 | 309 | 47 | 333 | 2.00e-83 | 255 |
MS.gene009041.t1 | AT1G74090 | 45.578 | 294 | 146 | 7 | 23 | 309 | 59 | 345 | 1.83e-77 | 240 |
MS.gene009041.t1 | AT2G27570 | 42.321 | 293 | 114 | 3 | 19 | 311 | 36 | 273 | 8.95e-77 | 236 |
Find 63 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGATTCTTTCACAGATTT+TGG | 0.131075 | 8.2:-36344610 | None:intergenic |
CATCAATATATCAAGGATTT+TGG | 0.142172 | 8.2:+36344281 | MS.gene009041:CDS |
TCATGCTCTTATTCCCTTCT+TGG | 0.189716 | 8.2:+36344492 | MS.gene009041:CDS |
GGATGGTTATGATCAATATT+TGG | 0.245340 | 8.2:-36344451 | None:intergenic |
CTTGATATATTGATGGGTTT+TGG | 0.254367 | 8.2:-36344273 | None:intergenic |
TGAGTTCTTATGGACCATTT+TGG | 0.270531 | 8.2:+36344767 | MS.gene009041:CDS |
TGTAGAGGAGTGAGTTCTTA+TGG | 0.275090 | 8.2:+36344757 | MS.gene009041:CDS |
GAGCCATGTGGTACCTGATT+TGG | 0.289760 | 8.2:-36344389 | None:intergenic |
AGTGACAAAGATTATGTTCC+TGG | 0.319344 | 8.2:+36344529 | MS.gene009041:CDS |
GGGAGCATGTATTAGGATAT+TGG | 0.331818 | 8.2:+36344788 | MS.gene009041:CDS |
AGCCATGTGGTACCTGATTT+GGG | 0.337859 | 8.2:-36344388 | None:intergenic |
CTCTCAAAAGCCTCTTCTAA+TGG | 0.341934 | 8.2:-36344730 | None:intergenic |
CTAAGATGATATCTGAATCT+AGG | 0.344853 | 8.2:-36344357 | None:intergenic |
TTTATAAACATCACCTTCTC+TGG | 0.349912 | 8.2:-36344829 | None:intergenic |
AGTGAAACAAACATGTCTTT+AGG | 0.355827 | 8.2:-36344661 | None:intergenic |
CATAATCTTTGTCACTATAA+AGG | 0.357838 | 8.2:-36344522 | None:intergenic |
CAAAATCCTTGATATATTGA+TGG | 0.392458 | 8.2:-36344280 | None:intergenic |
CCTAATACATGCTCCCAAAA+TGG | 0.396613 | 8.2:-36344781 | None:intergenic |
TTAGTTACTGCTCCCAAATC+AGG | 0.404570 | 8.2:+36344376 | MS.gene009041:CDS |
GATTCTTCTTCATGAGAGAA+TGG | 0.406545 | 8.2:-36344916 | None:intergenic |
GCCGTGGCAAAGTCGGAGAT+TGG | 0.412622 | 8.2:+36345052 | MS.gene009041:CDS |
GGGAATAAGAGCATGAGGAT+TGG | 0.413282 | 8.2:-36344485 | None:intergenic |
CAATATTTGGATATTTCTTA+CGG | 0.418013 | 8.2:-36344438 | None:intergenic |
AACACCTGTTGCTACTCTTC+CGG | 0.418445 | 8.2:-36345010 | None:intergenic |
AGGATATTGGAAGGAAAGCT+TGG | 0.445940 | 8.2:+36344801 | MS.gene009041:CDS |
AAGACATGTTTGTTTCACTT+TGG | 0.453802 | 8.2:+36344665 | MS.gene009041:CDS |
TAAGATGATATCTGAATCTA+GGG | 0.463673 | 8.2:-36344356 | None:intergenic |
GTTGATTTCCACCTTGCCAT+TGG | 0.463950 | 8.2:+36344232 | MS.gene009041:CDS |
TATGTGGAGAAGAGTCTTGG+AGG | 0.474226 | 8.2:-36344568 | None:intergenic |
TATATCATCAACCATGCCCT+TGG | 0.479593 | 8.2:-36344938 | None:intergenic |
AAAATCCTTGATATATTGAT+GGG | 0.490549 | 8.2:-36344279 | None:intergenic |
GGAGATAAAGAGTTAAGGCC+AGG | 0.506986 | 8.2:-36344547 | None:intergenic |
CAAAACCCATCAATATATCA+AGG | 0.511751 | 8.2:+36344274 | MS.gene009041:CDS |
TGAGAAGTTGAGCAACTTGG+AGG | 0.511813 | 8.2:+36344978 | MS.gene009041:CDS |
ATGTATGTGGAGAAGAGTCT+TGG | 0.512674 | 8.2:-36344571 | None:intergenic |
AACTTGGAGGTCAACAAGAC+CGG | 0.513880 | 8.2:+36344991 | MS.gene009041:CDS |
CAATCATTTCAGTTGTGAGA+AGG | 0.515174 | 8.2:-36345080 | None:intergenic |
TTGGAGGAGATAAAGAGTTA+AGG | 0.518296 | 8.2:-36344552 | None:intergenic |
ATGAGGATTGGAAGTGAGCA+AGG | 0.524088 | 8.2:-36344473 | None:intergenic |
ATAAAGGTCAATCTCCAAGA+AGG | 0.527045 | 8.2:-36344506 | None:intergenic |
TCCAATCTCCGACTTTGCCA+CGG | 0.534051 | 8.2:-36345053 | None:intergenic |
AAGACCGGAAGAGTAGCAAC+AGG | 0.551206 | 8.2:+36345006 | MS.gene009041:CDS |
AAAGCCTCTTCTAATGGAAG+TGG | 0.551607 | 8.2:-36344724 | None:intergenic |
CTCTCATGAAGAAGAATCCA+AGG | 0.552901 | 8.2:+36344921 | MS.gene009041:CDS |
TAAAGGTCAATCTCCAAGAA+GGG | 0.581441 | 8.2:-36344505 | None:intergenic |
CAAAACACAAGGAATGTATG+TGG | 0.587267 | 8.2:-36344584 | None:intergenic |
TGTGAAAGAATCAACTTGCA+AGG | 0.588731 | 8.2:+36344618 | MS.gene009041:CDS |
GATTGGAAGTGAGCAAGGGA+TGG | 0.591628 | 8.2:-36344468 | None:intergenic |
AAGCTTGGAAAGGCCAGAGA+AGG | 0.595580 | 8.2:+36344816 | MS.gene009041:CDS |
TGACTTAAGCCAAGAATGCA+AGG | 0.597377 | 8.2:+36344208 | None:intergenic |
AGGACCACTTCCATTAGAAG+AGG | 0.602220 | 8.2:+36344720 | MS.gene009041:CDS |
TGAAGAAGAATCCAAGGGCA+TGG | 0.605476 | 8.2:+36344927 | MS.gene009041:CDS |
ACTTTGGCATTTCTCAAACA+AGG | 0.607779 | 8.2:+36344681 | MS.gene009041:CDS |
AAGAAGGGAATAAGAGCATG+AGG | 0.620170 | 8.2:-36344490 | None:intergenic |
GCATGTATTAGGATATTGGA+AGG | 0.624163 | 8.2:+36344792 | MS.gene009041:CDS |
AAAATAAATTGCCTATACAT+GGG | 0.624421 | 8.2:+36345124 | MS.gene009041:CDS |
AAGGTAAGAGCACAGAGTAG+AGG | 0.625492 | 8.2:+36344700 | MS.gene009041:CDS |
TCTGACAAGATAAAACACCT+TGG | 0.628186 | 8.2:-36344321 | None:intergenic |
CTCCCAAATCAGGTACCACA+TGG | 0.632823 | 8.2:+36344386 | MS.gene009041:CDS |
TGAGGATTGGAAGTGAGCAA+GGG | 0.659064 | 8.2:-36344472 | None:intergenic |
ATTGGAAGGAAAGCTTGGAA+AGG | 0.672349 | 8.2:+36344806 | MS.gene009041:CDS |
TCTCATGAAGAAGAATCCAA+GGG | 0.676573 | 8.2:+36344922 | MS.gene009041:CDS |
AGTCAATGCTTTGAGCCATG+TGG | 0.682609 | 8.2:-36344401 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATCTTTTTCAAATAAAAACT+AGG | - | chr8.2:36344877-36344896 | None:intergenic | 15.0% |
!! | AAAAATAAATTGCCTATACA+TGG | + | chr8.2:36345123-36345142 | MS.gene009041:CDS | 20.0% |
!! | AAAATAAATTGCCTATACAT+GGG | + | chr8.2:36345124-36345143 | MS.gene009041:CDS | 20.0% |
!! | AAAATCCTTGATATATTGAT+GGG | - | chr8.2:36344282-36344301 | None:intergenic | 20.0% |
!! | CAATATTTGGATATTTCTTA+CGG | - | chr8.2:36344441-36344460 | None:intergenic | 20.0% |
!!! | ATGTATAGGCAATTTATTTT+TGG | - | chr8.2:36345124-36345143 | None:intergenic | 20.0% |
! | CAAAATCCTTGATATATTGA+TGG | - | chr8.2:36344283-36344302 | None:intergenic | 25.0% |
! | CATAATCTTTGTCACTATAA+AGG | - | chr8.2:36344525-36344544 | None:intergenic | 25.0% |
! | TAAGATGATATCTGAATCTA+GGG | - | chr8.2:36344359-36344378 | None:intergenic | 25.0% |
!! | CATCAATATATCAAGGATTT+TGG | + | chr8.2:36344281-36344300 | MS.gene009041:CDS | 25.0% |
AAGACATGTTTGTTTCACTT+TGG | + | chr8.2:36344665-36344684 | MS.gene009041:CDS | 30.0% | |
AGTGAAACAAACATGTCTTT+AGG | - | chr8.2:36344664-36344683 | None:intergenic | 30.0% | |
ATAGCCATAAAAATTCTCCA+AGG | + | chr8.2:36344304-36344323 | MS.gene009041:CDS | 30.0% | |
CAAAACCCATCAATATATCA+AGG | + | chr8.2:36344274-36344293 | MS.gene009041:CDS | 30.0% | |
CTAAGATGATATCTGAATCT+AGG | - | chr8.2:36344360-36344379 | None:intergenic | 30.0% | |
GGATGGTTATGATCAATATT+TGG | - | chr8.2:36344454-36344473 | None:intergenic | 30.0% | |
TAAAAACTCAACCCATGTAT+AGG | - | chr8.2:36345138-36345157 | None:intergenic | 30.0% | |
TTTATAAACATCACCTTCTC+TGG | - | chr8.2:36344832-36344851 | None:intergenic | 30.0% | |
! | AACACCTTGGAGAATTTTTA+TGG | - | chr8.2:36344311-36344330 | None:intergenic | 30.0% |
!! | GTTGATTCTTTCACAGATTT+TGG | - | chr8.2:36344613-36344632 | None:intergenic | 30.0% |
!!! | CTTGATATATTGATGGGTTT+TGG | - | chr8.2:36344276-36344295 | None:intergenic | 30.0% |
ACTTTGGCATTTCTCAAACA+AGG | + | chr8.2:36344681-36344700 | MS.gene009041:CDS | 35.0% | |
AGTGACAAAGATTATGTTCC+TGG | + | chr8.2:36344529-36344548 | MS.gene009041:CDS | 35.0% | |
ATAAAGGTCAATCTCCAAGA+AGG | - | chr8.2:36344509-36344528 | None:intergenic | 35.0% | |
CAAAACACAAGGAATGTATG+TGG | - | chr8.2:36344587-36344606 | None:intergenic | 35.0% | |
CAATCATTTCAGTTGTGAGA+AGG | - | chr8.2:36345083-36345102 | None:intergenic | 35.0% | |
GATTCTTCTTCATGAGAGAA+TGG | - | chr8.2:36344919-36344938 | None:intergenic | 35.0% | |
GCATGTATTAGGATATTGGA+AGG | + | chr8.2:36344792-36344811 | MS.gene009041:CDS | 35.0% | |
TAAAGGTCAATCTCCAAGAA+GGG | - | chr8.2:36344508-36344527 | None:intergenic | 35.0% | |
TCTCATGAAGAAGAATCCAA+GGG | + | chr8.2:36344922-36344941 | MS.gene009041:CDS | 35.0% | |
TCTGACAAGATAAAACACCT+TGG | - | chr8.2:36344324-36344343 | None:intergenic | 35.0% | |
TGTGAAAGAATCAACTTGCA+AGG | + | chr8.2:36344618-36344637 | MS.gene009041:CDS | 35.0% | |
TTGGAGGAGATAAAGAGTTA+AGG | - | chr8.2:36344555-36344574 | None:intergenic | 35.0% | |
! | GAGTTCTTATGGACCATTTT+GGG | + | chr8.2:36344768-36344787 | MS.gene009041:CDS | 35.0% |
! | TGAGTTCTTATGGACCATTT+TGG | + | chr8.2:36344767-36344786 | MS.gene009041:CDS | 35.0% |
!! | AAAATCCAGGCTTTTTCCAA+TGG | - | chr8.2:36344251-36344270 | None:intergenic | 35.0% |
!! | GATTTTGGCAACAAAACACA+AGG | - | chr8.2:36344598-36344617 | None:intergenic | 35.0% |
!! | GCTTTTGAGAGTTTTTGTAG+AGG | + | chr8.2:36344742-36344761 | MS.gene009041:CDS | 35.0% |
!! | TTTTGAGAAGTTGAGCAACT+TGG | + | chr8.2:36344975-36344994 | MS.gene009041:CDS | 35.0% |
!!! | AATAAAGCTTTTTTTCGCCG+TGG | + | chr8.2:36345036-36345055 | MS.gene009041:CDS | 35.0% |
!!! | ATGGGTTTTGGTTAAAATCC+AGG | - | chr8.2:36344264-36344283 | None:intergenic | 35.0% |
AAAGCCTCTTCTAATGGAAG+TGG | - | chr8.2:36344727-36344746 | None:intergenic | 40.0% | |
AGGATATTGGAAGGAAAGCT+TGG | + | chr8.2:36344801-36344820 | MS.gene009041:CDS | 40.0% | |
ATGTATGTGGAGAAGAGTCT+TGG | - | chr8.2:36344574-36344593 | None:intergenic | 40.0% | |
ATTGGAAGGAAAGCTTGGAA+AGG | + | chr8.2:36344806-36344825 | MS.gene009041:CDS | 40.0% | |
CCTAATACATGCTCCCAAAA+TGG | - | chr8.2:36344784-36344803 | None:intergenic | 40.0% | |
CTCTCAAAAGCCTCTTCTAA+TGG | - | chr8.2:36344733-36344752 | None:intergenic | 40.0% | |
CTCTCATGAAGAAGAATCCA+AGG | + | chr8.2:36344921-36344940 | MS.gene009041:CDS | 40.0% | |
TATATCATCAACCATGCCCT+TGG | - | chr8.2:36344941-36344960 | None:intergenic | 40.0% | |
TCATGCTCTTATTCCCTTCT+TGG | + | chr8.2:36344492-36344511 | MS.gene009041:CDS | 40.0% | |
TGTAGAGGAGTGAGTTCTTA+TGG | + | chr8.2:36344757-36344776 | MS.gene009041:CDS | 40.0% | |
TTAGTTACTGCTCCCAAATC+AGG | + | chr8.2:36344376-36344395 | MS.gene009041:CDS | 40.0% | |
! | AAGAAGGGAATAAGAGCATG+AGG | - | chr8.2:36344493-36344512 | None:intergenic | 40.0% |
! | GGGAGCATGTATTAGGATAT+TGG | + | chr8.2:36344788-36344807 | MS.gene009041:CDS | 40.0% |
!! | CCATTTTGGGAGCATGTATT+AGG | + | chr8.2:36344781-36344800 | MS.gene009041:CDS | 40.0% |
AACACCTGTTGCTACTCTTC+CGG | - | chr8.2:36345013-36345032 | None:intergenic | 45.0% | |
AACTTGGAGGTCAACAAGAC+CGG | + | chr8.2:36344991-36345010 | MS.gene009041:CDS | 45.0% | |
AGCCATGTGGTACCTGATTT+GGG | - | chr8.2:36344391-36344410 | None:intergenic | 45.0% | |
AGGACCACTTCCATTAGAAG+AGG | + | chr8.2:36344720-36344739 | MS.gene009041:CDS | 45.0% | |
ATGAGGATTGGAAGTGAGCA+AGG | - | chr8.2:36344476-36344495 | None:intergenic | 45.0% | |
GGAGATAAAGAGTTAAGGCC+AGG | - | chr8.2:36344550-36344569 | None:intergenic | 45.0% | |
TATGTGGAGAAGAGTCTTGG+AGG | - | chr8.2:36344571-36344590 | None:intergenic | 45.0% | |
TGAAGAAGAATCCAAGGGCA+TGG | + | chr8.2:36344927-36344946 | MS.gene009041:CDS | 45.0% | |
TGAGAAGTTGAGCAACTTGG+AGG | + | chr8.2:36344978-36344997 | MS.gene009041:CDS | 45.0% | |
TGAGGATTGGAAGTGAGCAA+GGG | - | chr8.2:36344475-36344494 | None:intergenic | 45.0% | |
! | AAGGTAAGAGCACAGAGTAG+AGG | + | chr8.2:36344700-36344719 | MS.gene009041:CDS | 45.0% |
! | AGTCAATGCTTTGAGCCATG+TGG | - | chr8.2:36344404-36344423 | None:intergenic | 45.0% |
! | GGGAATAAGAGCATGAGGAT+TGG | - | chr8.2:36344488-36344507 | None:intergenic | 45.0% |
! | GTTGATTTCCACCTTGCCAT+TGG | + | chr8.2:36344232-36344251 | MS.gene009041:CDS | 45.0% |
!!! | TTTTTTCGCCGTGGCAAAGT+CGG | + | chr8.2:36345045-36345064 | MS.gene009041:CDS | 45.0% |
AAGACCGGAAGAGTAGCAAC+AGG | + | chr8.2:36345006-36345025 | MS.gene009041:CDS | 50.0% | |
AAGCTTGGAAAGGCCAGAGA+AGG | + | chr8.2:36344816-36344835 | MS.gene009041:CDS | 50.0% | |
CCTTGCCATTGGAAAAAGCC+TGG | + | chr8.2:36344243-36344262 | MS.gene009041:CDS | 50.0% | |
CTCCCAAATCAGGTACCACA+TGG | + | chr8.2:36344386-36344405 | MS.gene009041:CDS | 50.0% | |
GAGCCATGTGGTACCTGATT+TGG | - | chr8.2:36344392-36344411 | None:intergenic | 50.0% | |
GATTGGAAGTGAGCAAGGGA+TGG | - | chr8.2:36344471-36344490 | None:intergenic | 50.0% | |
TCCAATCTCCGACTTTGCCA+CGG | - | chr8.2:36345056-36345075 | None:intergenic | 50.0% | |
!! | CCAGGCTTTTTCCAATGGCA+AGG | - | chr8.2:36344246-36344265 | None:intergenic | 50.0% |
!! | GGCTTTTTCCAATGGCAAGG+TGG | - | chr8.2:36344243-36344262 | None:intergenic | 50.0% |
GCCGTGGCAAAGTCGGAGAT+TGG | + | chr8.2:36345052-36345071 | MS.gene009041:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 36344223 | 36345158 | 36344223 | ID=MS.gene009041 |
chr8.2 | mRNA | 36344223 | 36345158 | 36344223 | ID=MS.gene009041.t1;Parent=MS.gene009041 |
chr8.2 | exon | 36344223 | 36345158 | 36344223 | ID=MS.gene009041.t1.exon1;Parent=MS.gene009041.t1 |
chr8.2 | CDS | 36344223 | 36345158 | 36344223 | ID=cds.MS.gene009041.t1;Parent=MS.gene009041.t1 |
Gene Sequence |
Protein sequence |