Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009304.t1 | XP_003598073.1 | 98 | 344 | 7 | 0 | 1 | 344 | 39 | 382 | 2.70E-190 | 674.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009304.t1 | A1RYE4 | 34.5 | 264 | 148 | 5 | 68 | 323 | 58 | 304 | 4.3e-32 | 140.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009304.t1 | G7J081 | 98.0 | 344 | 7 | 0 | 1 | 344 | 39 | 382 | 1.9e-190 | 674.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene009304 | MS.gene073336 | PPI |
MS.gene009304 | MS.gene012318 | PPI |
MS.gene009304 | MS.gene96326 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009304.t1 | MTR_3g005970 | 97.965 | 344 | 7 | 0 | 1 | 344 | 39 | 382 | 0.0 | 699 |
MS.gene009304.t1 | MTR_4g005880 | 31.890 | 254 | 153 | 5 | 79 | 329 | 151 | 387 | 2.65e-30 | 121 |
MS.gene009304.t1 | MTR_1g107480 | 32.016 | 253 | 154 | 5 | 79 | 329 | 118 | 354 | 1.45e-29 | 119 |
MS.gene009304.t1 | MTR_8g033410 | 26.571 | 350 | 209 | 12 | 7 | 337 | 1 | 321 | 2.05e-27 | 110 |
MS.gene009304.t1 | MTR_8g033390 | 27.536 | 276 | 173 | 6 | 68 | 337 | 64 | 318 | 8.14e-27 | 108 |
MS.gene009304.t1 | MTR_8g033400 | 28.626 | 262 | 159 | 7 | 69 | 324 | 76 | 315 | 6.54e-26 | 106 |
MS.gene009304.t1 | MTR_4g012960 | 26.493 | 268 | 177 | 3 | 70 | 337 | 58 | 305 | 6.83e-25 | 102 |
MS.gene009304.t1 | MTR_4g013100 | 28.044 | 271 | 172 | 6 | 70 | 337 | 59 | 309 | 3.01e-24 | 101 |
MS.gene009304.t1 | MTR_4g013090 | 27.306 | 271 | 174 | 5 | 70 | 337 | 58 | 308 | 8.59e-24 | 100 |
MS.gene009304.t1 | MTR_6g007170 | 29.811 | 265 | 156 | 6 | 74 | 328 | 116 | 360 | 8.17e-21 | 92.8 |
MS.gene009304.t1 | MTR_2g101840 | 25.758 | 264 | 179 | 3 | 61 | 324 | 50 | 296 | 1.61e-20 | 90.9 |
MS.gene009304.t1 | MTR_7g075830 | 25.352 | 284 | 167 | 8 | 80 | 342 | 57 | 316 | 3.38e-17 | 81.6 |
MS.gene009304.t1 | MTR_6g007175 | 27.891 | 294 | 160 | 9 | 48 | 328 | 56 | 310 | 5.66e-17 | 81.3 |
MS.gene009304.t1 | MTR_4g013135 | 28.044 | 271 | 172 | 5 | 70 | 337 | 58 | 308 | 3.66e-15 | 75.5 |
MS.gene009304.t1 | MTR_1g112510 | 26.038 | 265 | 185 | 5 | 81 | 337 | 88 | 349 | 8.50e-15 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009304.t1 | AT1G72190 | 69.605 | 329 | 93 | 1 | 16 | 344 | 52 | 373 | 4.21e-171 | 481 |
MS.gene009304.t1 | AT1G17745 | 32.056 | 287 | 173 | 8 | 47 | 328 | 111 | 380 | 6.49e-32 | 126 |
MS.gene009304.t1 | AT4G34200 | 31.496 | 254 | 154 | 6 | 79 | 329 | 124 | 360 | 1.65e-29 | 119 |
MS.gene009304.t1 | AT1G17745 | 29.618 | 314 | 172 | 9 | 47 | 328 | 111 | 407 | 2.24e-29 | 119 |
MS.gene009304.t1 | AT2G45630 | 28.897 | 263 | 162 | 5 | 80 | 337 | 91 | 333 | 4.58e-27 | 109 |
MS.gene009304.t1 | AT3G19480 | 31.102 | 254 | 155 | 5 | 79 | 329 | 109 | 345 | 5.14e-27 | 112 |
MS.gene009304.t1 | AT1G12550 | 27.376 | 263 | 163 | 7 | 67 | 323 | 62 | 302 | 6.26e-23 | 97.8 |
MS.gene009304.t1 | AT5G14780 | 32.068 | 237 | 131 | 6 | 87 | 313 | 101 | 317 | 1.62e-21 | 94.4 |
MS.gene009304.t1 | AT5G14780 | 32.068 | 237 | 131 | 6 | 87 | 313 | 113 | 329 | 1.78e-21 | 94.4 |
MS.gene009304.t1 | AT5G14780 | 32.068 | 237 | 131 | 6 | 87 | 313 | 127 | 343 | 2.29e-21 | 94.4 |
MS.gene009304.t1 | AT1G79870 | 27.636 | 275 | 175 | 7 | 70 | 340 | 58 | 312 | 5.93e-20 | 89.4 |
MS.gene009304.t1 | AT1G79870 | 25.000 | 272 | 167 | 6 | 70 | 340 | 58 | 293 | 2.22e-15 | 75.9 |
MS.gene009304.t1 | AT1G68010 | 26.792 | 265 | 183 | 5 | 81 | 337 | 88 | 349 | 8.34e-15 | 75.1 |
MS.gene009304.t1 | AT1G68010 | 26.848 | 257 | 177 | 5 | 81 | 329 | 88 | 341 | 4.13e-14 | 72.8 |
MS.gene009304.t1 | AT1G68010 | 26.692 | 266 | 183 | 6 | 81 | 337 | 88 | 350 | 2.59e-13 | 70.9 |
Find 74 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTATCGGTGATACTTTATT+TGG | 0.071786 | 3.2:-762002 | MS.gene009304:CDS |
GATAATGTAGATATTCATTT+TGG | 0.088675 | 3.2:-761007 | MS.gene009304:intron |
CTTCATTTCTTCCATGAAAA+AGG | 0.182361 | 3.2:-760448 | MS.gene009304:intron |
GCACGGCGATTGAAACTATT+TGG | 0.212324 | 3.2:-760958 | MS.gene009304:CDS |
TTTATTTCAGGGTGCCCTTC+TGG | 0.268864 | 3.2:-759556 | MS.gene009304:intron |
TCCAAGCTTCCTTTGCTGTA+TGG | 0.363828 | 3.2:+762028 | None:intergenic |
AAGACCCAACATTAGATATA+TGG | 0.364315 | 3.2:+762836 | None:intergenic |
CTATCGGTGATACTTTATTT+GGG | 0.376577 | 3.2:-762001 | MS.gene009304:CDS |
ATCATGACTCCTCATATTGC+AGG | 0.397820 | 3.2:-759390 | MS.gene009304:CDS |
CTCCTAAGTGTCCGGATTCA+AGG | 0.399021 | 3.2:+759484 | None:intergenic |
TACTACACAAACATGATAGT+TGG | 0.402501 | 3.2:+763122 | None:intergenic |
AGGATCCCCAGTGGTGCTAC+TGG | 0.419307 | 3.2:-762885 | MS.gene009304:CDS |
TAGAGATGTACCTTGATAGA+TGG | 0.426362 | 3.2:+764968 | None:intergenic |
ATCTGATCATCGGGATCAAA+TGG | 0.430970 | 3.2:+759432 | None:intergenic |
AATTTCAATATCTGATCATC+GGG | 0.437385 | 3.2:+759423 | None:intergenic |
TTCAGTTGCATGTGCTGAAA+TGG | 0.438602 | 3.2:-762859 | MS.gene009304:CDS |
CTTATAATGCAGTATGGTGT+TGG | 0.439984 | 3.2:-763048 | MS.gene009304:CDS |
AACCTTAGCCATGGATCTAT+AGG | 0.450234 | 3.2:+759353 | None:intergenic |
TATTGCTACAAAGCGGAGTT+GGG | 0.456275 | 3.2:-760926 | MS.gene009304:CDS |
ATGAAGCTTATAATGCAGTA+TGG | 0.460758 | 3.2:-763054 | MS.gene009304:CDS |
CCTTGGGAATTTCTTCCAAC+GGG | 0.461257 | 3.2:+763151 | None:intergenic |
TCCATACAGCAAAGGAAGCT+TGG | 0.462894 | 3.2:-762029 | MS.gene009304:CDS |
ATGATAGTTGGCAATAGCCT+TGG | 0.466311 | 3.2:+763134 | None:intergenic |
TCCTAGCCCTCCTAAGTGTC+CGG | 0.468903 | 3.2:+759476 | None:intergenic |
AAAATCTGATGGAGAGAAAT+GGG | 0.472016 | 3.2:-765093 | None:intergenic |
CATGCTGGAAATCCTTTGAC+AGG | 0.473055 | 3.2:-759127 | MS.gene009304:CDS |
TTATTGCTACAAAGCGGAGT+TGG | 0.473922 | 3.2:-760927 | MS.gene009304:CDS |
AAATTTCAATATCTGATCAT+CGG | 0.488385 | 3.2:+759422 | None:intergenic |
AATGGCCATATATCTAATGT+TGG | 0.489549 | 3.2:-762841 | MS.gene009304:CDS |
TGAATTTCCAGTAGCACCAC+TGG | 0.503475 | 3.2:+762878 | None:intergenic |
ATGGCCATATATCTAATGTT+GGG | 0.506294 | 3.2:-762840 | MS.gene009304:CDS |
TGATAGTTGGCAATAGCCTT+GGG | 0.519273 | 3.2:+763135 | None:intergenic |
CTTAAACTTAAACAGTGAAA+CGG | 0.520932 | 3.2:-760689 | MS.gene009304:intron |
GCCTTGGGAATTTCTTCCAA+CGG | 0.523993 | 3.2:+763150 | None:intergenic |
ACTATAGGTTGTTGGTGATG+TGG | 0.525653 | 3.2:-759161 | MS.gene009304:intron |
GTGGTTCTTCAACTTCATGC+TGG | 0.529637 | 3.2:-759142 | MS.gene009304:CDS |
ATCGATGCTGCAACAAAGCA+TGG | 0.530276 | 3.2:-762921 | MS.gene009304:CDS |
AACCTTGAATCCGGACACTT+AGG | 0.536199 | 3.2:-759486 | MS.gene009304:CDS |
GCAGAATCATCCATCTATCA+AGG | 0.542084 | 3.2:-764978 | MS.gene009304:intron |
GGCTAGGAACCGATGTTGCA+TGG | 0.544266 | 3.2:-759461 | MS.gene009304:CDS |
ACTAACTCAATTCCTGTCAA+AGG | 0.547459 | 3.2:+759115 | None:intergenic |
AGGAACCGATGTTGCATGGA+CGG | 0.557674 | 3.2:-759457 | MS.gene009304:CDS |
TTATAATGCAGTATGGTGTT+GGG | 0.558492 | 3.2:-763047 | MS.gene009304:CDS |
ACAGCCTCATAGTCTAAAAG+AGG | 0.560341 | 3.2:+759516 | None:intergenic |
CTCCTATAGATCCATGGCTA+AGG | 0.568330 | 3.2:-759355 | MS.gene009304:intron |
CTTGAATCCGGACACTTAGG+AGG | 0.570448 | 3.2:-759483 | MS.gene009304:CDS |
ACATTGGAATTGATTTAGCA+CGG | 0.573732 | 3.2:-760975 | MS.gene009304:CDS |
CCAAATAAAGTATCACCGAT+AGG | 0.575385 | 3.2:+762002 | None:intergenic |
AATGCAGTATGGTGTTGGGC+TGG | 0.576747 | 3.2:-763043 | MS.gene009304:CDS |
CAGTATGGTGTTGGGCTGGA+AGG | 0.577929 | 3.2:-763039 | MS.gene009304:intron |
GAATTTCCAGTAGCACCACT+GGG | 0.581979 | 3.2:+762879 | None:intergenic |
TCCGGACACTTAGGAGGGCT+AGG | 0.583295 | 3.2:-759477 | MS.gene009304:CDS |
GTAGGTTGATGTTCTCCCGT+TGG | 0.587056 | 3.2:-763166 | MS.gene009304:intron |
CTTCTGGTTAATGTTGCTAG+AGG | 0.594373 | 3.2:-759540 | MS.gene009304:CDS |
CTCTAGCAACATTAACCAGA+AGG | 0.595259 | 3.2:+759541 | None:intergenic |
TGCAGATTTCCATACAGCAA+AGG | 0.595617 | 3.2:-762037 | MS.gene009304:CDS |
GAAGATACTATACTTGCTTG+CGG | 0.595687 | 3.2:+762811 | None:intergenic |
AGCCACACAAACCTTAGCCA+TGG | 0.596880 | 3.2:+759344 | None:intergenic |
TGATGATCTTGTTGATGTGA+AGG | 0.599066 | 3.2:-760767 | MS.gene009304:CDS |
AGGAAGCTTGGAGAGCCTAT+CGG | 0.606938 | 3.2:-762017 | MS.gene009304:CDS |
AGCATGGAATCAAAGTTGCT+AGG | 0.608422 | 3.2:-762905 | MS.gene009304:CDS |
AGAACACTCCTATAGATCCA+TGG | 0.614020 | 3.2:-759361 | MS.gene009304:CDS |
CCCGTTGGAAGAAATTCCCA+AGG | 0.614180 | 3.2:-763151 | MS.gene009304:CDS |
GTTGTATATAGATGAGAACA+TGG | 0.621208 | 3.2:+765010 | None:intergenic |
TCTGTAACGCCTGCAATATG+AGG | 0.621540 | 3.2:+759381 | None:intergenic |
GATGATCTTGTTGATGTGAA+GGG | 0.630775 | 3.2:-760766 | MS.gene009304:CDS |
TGGCTCCGTCCATGCAACAT+CGG | 0.631902 | 3.2:+759452 | None:intergenic |
AGATGAGAACATGGGAACTG+AGG | 0.641093 | 3.2:+765019 | None:intergenic |
TTGAATCCGGACACTTAGGA+GGG | 0.659810 | 3.2:-759482 | MS.gene009304:CDS |
TCTAGCAACATTAACCAGAA+GGG | 0.669159 | 3.2:+759542 | None:intergenic |
TAAAAGTTATTGCTACAAAG+CGG | 0.687855 | 3.2:-760933 | MS.gene009304:CDS |
TTGTATATAGATGAGAACAT+GGG | 0.718125 | 3.2:+765011 | None:intergenic |
AAAGTTGCTAGGATCCCCAG+TGG | 0.758524 | 3.2:-762894 | MS.gene009304:CDS |
AATTTCCAGTAGCACCACTG+GGG | 0.785993 | 3.2:+762880 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATGAAATAAGTAAATTTA+AGG | + | chr3.2:763793-763812 | None:intergenic | 10.0% |
!! | AATGAAATAAGTAAATTTAA+GGG | + | chr3.2:763792-763811 | None:intergenic | 10.0% |
!! | ATATTTCATTATATCTAAAT+TGG | - | chr3.2:760040-760059 | MS.gene009304:intron | 10.0% |
!! | ATTTCAGTAAATATAAATAT+GGG | + | chr3.2:762889-762908 | None:intergenic | 10.0% |
!! | TATTTCAGTAAATATAAATA+TGG | + | chr3.2:762890-762909 | None:intergenic | 10.0% |
!!! | ATTTACTTATTTCATTTTTT+AGG | - | chr3.2:763796-763815 | MS.gene009304:intron | 10.0% |
!!! | TAGAAATATAGATTTTATTT+CGG | + | chr3.2:762370-762389 | None:intergenic | 10.0% |
!!! | TTTACTTATTTCATTTTTTA+GGG | - | chr3.2:763797-763816 | MS.gene009304:intron | 10.0% |
!!! | TTTGATATTTTTTTTTATCA+AGG | - | chr3.2:762711-762730 | MS.gene009304:intron | 10.0% |
!! | AAAACGAATAAATAAATGAT+TGG | + | chr3.2:763541-763560 | None:intergenic | 15.0% |
!! | AATAGAAATAGAGAAAATAA+TGG | - | chr3.2:763950-763969 | MS.gene009304:intron | 15.0% |
!! | AATATTTGTCAATAAAAATG+TGG | + | chr3.2:761472-761491 | None:intergenic | 15.0% |
!! | ATAGATACCAATTTAAATTA+AGG | + | chr3.2:760799-760818 | None:intergenic | 15.0% |
!! | ATCAAATTTCTGTTATATTT+AGG | + | chr3.2:759680-759699 | None:intergenic | 15.0% |
!! | ATGAAATAAGTAAATTTAAG+GGG | + | chr3.2:763791-763810 | None:intergenic | 15.0% |
!! | GAAAAATAATAAATAATCAG+AGG | + | chr3.2:761237-761256 | None:intergenic | 15.0% |
!! | GAAAATATCAAAATGAAAAA+AGG | + | chr3.2:759285-759304 | None:intergenic | 15.0% |
!! | TATATTGTCAAAATATGAAT+TGG | + | chr3.2:759822-759841 | None:intergenic | 15.0% |
!! | TTATATTTACTGAAATAGAT+CGG | - | chr3.2:762893-762912 | MS.gene009304:CDS | 15.0% |
!! | TTATCTAACCTAAAATTAAT+TGG | + | chr3.2:760987-761006 | None:intergenic | 15.0% |
!!! | AATTTGAAATGAAGAAAAAT+AGG | + | chr3.2:759998-760017 | None:intergenic | 15.0% |
!!! | ATAATGTAGATATTCATTTT+GGG | - | chr3.2:763187-763206 | MS.gene009304:intron | 15.0% |
!!! | ATATATAGATAGTTTACTTT+TGG | - | chr3.2:762487-762506 | MS.gene009304:intron | 15.0% |
!!! | GATTTTATTTTTTTATCAGT+AGG | - | chr3.2:764409-764428 | MS.gene009304:intron | 15.0% |
!!! | TATTTATTATTTTTCCTCTT+AGG | - | chr3.2:761242-761261 | MS.gene009304:intron | 15.0% |
!! | AAAATATGATCTTTAACGAT+TGG | + | chr3.2:763071-763090 | None:intergenic | 20.0% |
!! | AAATTAAAATTAGTAGCCTA+AGG | - | chr3.2:764200-764219 | MS.gene009304:intron | 20.0% |
!! | AAATTTCAATATCTGATCAT+CGG | + | chr3.2:764774-764793 | None:intergenic | 20.0% |
!! | AACAAGATTAAAAATGCAAA+AGG | + | chr3.2:759431-759450 | None:intergenic | 20.0% |
!! | AATAATGTATAACTGGAATT+TGG | - | chr3.2:764366-764385 | MS.gene009304:intron | 20.0% |
!! | ACATAGAAATAATGTATAAC+TGG | - | chr3.2:764359-764378 | MS.gene009304:intron | 20.0% |
!! | AGTTAAAACAAAAGGAATTA+TGG | - | chr3.2:759626-759645 | MS.gene009304:intron | 20.0% |
!! | ATAATCAAAGAATAGTTCAT+AGG | + | chr3.2:764110-764129 | None:intergenic | 20.0% |
!! | ATTTAAATTGGTATCTATCA+TGG | - | chr3.2:760801-760820 | MS.gene009304:intron | 20.0% |
!! | CCAATTTAAATTAAGGAAAT+AGG | + | chr3.2:760792-760811 | None:intergenic | 20.0% |
!! | CCTATTTCCTTAATTTAAAT+TGG | - | chr3.2:760789-760808 | MS.gene009304:intron | 20.0% |
!! | GTTAAAACAAAAGGAATTAT+GGG | - | chr3.2:759627-759646 | MS.gene009304:intron | 20.0% |
!! | TAATCAAAGAATAGTTCATA+GGG | + | chr3.2:764109-764128 | None:intergenic | 20.0% |
!! | TAGATTGAATTAAGTTTCTT+CGG | - | chr3.2:759900-759919 | MS.gene009304:intron | 20.0% |
!! | TATAAAACAATAGTGATGAA+TGG | - | chr3.2:759394-759413 | MS.gene009304:CDS | 20.0% |
!! | TTCAGAGAAACAATTAAAAT+TGG | - | chr3.2:760551-760570 | MS.gene009304:intron | 20.0% |
!! | TTTAAATTGGTATCTATCAT+GGG | - | chr3.2:760802-760821 | MS.gene009304:intron | 20.0% |
!!! | ACTACTAGAAACTTTTTTAA+AGG | - | chr3.2:761632-761651 | MS.gene009304:intron | 20.0% |
!!! | ATTTTAATTTCGTAGAGAAT+AGG | + | chr3.2:764190-764209 | None:intergenic | 20.0% |
!!! | CATTTCTTGTTGTTTTATAT+AGG | - | chr3.2:764517-764536 | MS.gene009304:intron | 20.0% |
!!! | CTACTAGAAACTTTTTTAAA+GGG | - | chr3.2:761633-761652 | MS.gene009304:intron | 20.0% |
!!! | CTTCTTATTTCATAATTCTA+CGG | + | chr3.2:759773-759792 | None:intergenic | 20.0% |
!!! | GATAATGTAGATATTCATTT+TGG | - | chr3.2:763186-763205 | MS.gene009304:intron | 20.0% |
!!! | GTTTCATTCCAATTAATTTT+AGG | - | chr3.2:760976-760995 | MS.gene009304:CDS | 20.0% |
!!! | GTTTTAACTTATAAATGTCA+TGG | - | chr3.2:759326-759345 | MS.gene009304:intron | 20.0% |
!!! | TAATGTAGATATTCATTTTG+GGG | - | chr3.2:763188-763207 | MS.gene009304:intron | 20.0% |
!!! | TACTAGAAACTTTTTTAAAG+GGG | - | chr3.2:761634-761653 | MS.gene009304:intron | 20.0% |
!!! | TCTATATTTCTACCTTAAAA+AGG | - | chr3.2:762378-762397 | MS.gene009304:intron | 20.0% |
!!! | TTTGCATTTTTAATCTTGTT+GGG | - | chr3.2:759431-759450 | MS.gene009304:CDS | 20.0% |
!!! | TTTTCATTACAATTTGCTTT+TGG | - | chr3.2:763619-763638 | MS.gene009304:intron | 20.0% |
!!! | TTTTGCATTTTTAATCTTGT+TGG | - | chr3.2:759430-759449 | MS.gene009304:CDS | 20.0% |
! | AATTTCAATATCTGATCATC+GGG | + | chr3.2:764773-764792 | None:intergenic | 25.0% |
! | ACTTTACTATAAGTCCAAAT+AGG | + | chr3.2:759737-759756 | None:intergenic | 25.0% |
! | AGTAGCAAGTACATATAAAA+TGG | + | chr3.2:760847-760866 | None:intergenic | 25.0% |
! | ATCTCTAATAACAAGCAATT+AGG | - | chr3.2:762763-762782 | MS.gene009304:intron | 25.0% |
! | ATTTGCAAAAACTAAAACAG+TGG | - | chr3.2:763144-763163 | MS.gene009304:CDS | 25.0% |
! | CGTAGAATTATGAAATAAGA+AGG | - | chr3.2:759771-759790 | MS.gene009304:intron | 25.0% |
! | CTTAAACTTAAACAGTGAAA+CGG | - | chr3.2:763504-763523 | MS.gene009304:intron | 25.0% |
! | GCAATCTCATTTAGAAATAA+TGG | + | chr3.2:761428-761447 | None:intergenic | 25.0% |
! | GCTTGAAATAAAAAACTAAG+AGG | + | chr3.2:759658-759677 | None:intergenic | 25.0% |
! | GTTATTGTTTAATATGCCAT+GGG | - | chr3.2:762269-762288 | MS.gene009304:intron | 25.0% |
! | TAAAAGTTATTGCTACAAAG+CGG | - | chr3.2:763260-763279 | MS.gene009304:intron | 25.0% |
! | TAAATTTAAGGGGTTAATCT+TGG | + | chr3.2:763781-763800 | None:intergenic | 25.0% |
! | TAATGTACAATTAAACTGCT+TGG | - | chr3.2:760303-760322 | MS.gene009304:intron | 25.0% |
! | TCATTAAGTAAACATAACCA+CGG | + | chr3.2:764056-764075 | None:intergenic | 25.0% |
! | TCGTGAAAATTGATTGAATT+AGG | - | chr3.2:762521-762540 | MS.gene009304:intron | 25.0% |
! | TCTCTAATAACAAGCAATTA+GGG | - | chr3.2:762764-762783 | MS.gene009304:intron | 25.0% |
! | TCTGTAAGAAACTATGTTAA+GGG | - | chr3.2:760126-760145 | MS.gene009304:intron | 25.0% |
! | TGACAAATATTTGAAAGCAA+GGG | - | chr3.2:761481-761500 | MS.gene009304:intron | 25.0% |
! | TGATTAATGAGCTTCAATTT+AGG | - | chr3.2:759498-759517 | MS.gene009304:CDS | 25.0% |
! | TGTTATTGTTTAATATGCCA+TGG | - | chr3.2:762268-762287 | MS.gene009304:intron | 25.0% |
! | TTAAATTGGTATCTATCATG+GGG | - | chr3.2:760803-760822 | MS.gene009304:intron | 25.0% |
! | TTCTGTAAGAAACTATGTTA+AGG | - | chr3.2:760125-760144 | MS.gene009304:intron | 25.0% |
! | TTGACAAATATTTGAAAGCA+AGG | - | chr3.2:761480-761499 | MS.gene009304:intron | 25.0% |
! | TTGTATATAGATGAGAACAT+GGG | + | chr3.2:759185-759204 | None:intergenic | 25.0% |
! | TTTACAGATCCATATAATTC+TGG | + | chr3.2:764894-764913 | None:intergenic | 25.0% |
! | TTTCAGTAGTAGTTATCTTT+AGG | - | chr3.2:760688-760707 | MS.gene009304:intron | 25.0% |
!! | AAATTGGTGTTCTATCATTT+GGG | - | chr3.2:760056-760075 | MS.gene009304:intron | 25.0% |
!! | ACAATTAAAATTGGTGATCT+TGG | - | chr3.2:760560-760579 | MS.gene009304:intron | 25.0% |
!! | ATAGACTTTTGATCAAGATA+AGG | - | chr3.2:764316-764335 | MS.gene009304:intron | 25.0% |
!! | CAATTAAAATTGGTGATCTT+GGG | - | chr3.2:760561-760580 | MS.gene009304:intron | 25.0% |
!! | GTTGCATACATTGATTAAAA+TGG | - | chr3.2:762328-762347 | MS.gene009304:intron | 25.0% |
!! | TAAATTGGTGTTCTATCATT+TGG | - | chr3.2:760055-760074 | MS.gene009304:intron | 25.0% |
!! | TAGACTTTTGATCAAGATAA+GGG | - | chr3.2:764317-764336 | MS.gene009304:intron | 25.0% |
!! | TCAATCAATTTTCACGAAAA+GGG | + | chr3.2:762518-762537 | None:intergenic | 25.0% |
!! | TGTTTTATATAGGCTAGATT+GGG | - | chr3.2:764527-764546 | MS.gene009304:intron | 25.0% |
!! | TTCAATCAATTTTCACGAAA+AGG | + | chr3.2:762519-762538 | None:intergenic | 25.0% |
!!! | ATCCAGGCAATAATTTTTTT+AGG | - | chr3.2:762420-762439 | MS.gene009304:intron | 25.0% |
!!! | TAATTTTTTTAGGTGTCTGA+TGG | - | chr3.2:762430-762449 | MS.gene009304:intron | 25.0% |
!!! | TTCCTTTTGTTTTAACTCTT+CGG | + | chr3.2:759623-759642 | None:intergenic | 25.0% |
!!! | TTGTTTTATATAGGCTAGAT+TGG | - | chr3.2:764526-764545 | MS.gene009304:intron | 25.0% |
AAAATTAAAGCAATGCTCAG+AGG | + | chr3.2:762694-762713 | None:intergenic | 30.0% | |
AACATTGTTTCCTATGTTGT+TGG | + | chr3.2:760670-760689 | None:intergenic | 30.0% | |
AACCGAAGAGTTAAAACAAA+AGG | - | chr3.2:759618-759637 | MS.gene009304:intron | 30.0% | |
AAGACCCAACATTAGATATA+TGG | + | chr3.2:761360-761379 | None:intergenic | 30.0% | |
AATGGCCATATATCTAATGT+TGG | - | chr3.2:761352-761371 | MS.gene009304:intron | 30.0% | |
ACAAATATTTGAAAGCAAGG+GGG | - | chr3.2:761483-761502 | MS.gene009304:intron | 30.0% | |
ACAACCTATAGTAAAACAAC+AGG | + | chr3.2:765024-765043 | None:intergenic | 30.0% | |
ATCAAGGTACATCTCTATTA+GGG | - | chr3.2:759231-759250 | MS.gene009304:intron | 30.0% | |
ATGAAGCTTATAATGCAGTA+TGG | - | chr3.2:761139-761158 | MS.gene009304:intron | 30.0% | |
ATGGCCATATATCTAATGTT+GGG | - | chr3.2:761353-761372 | MS.gene009304:intron | 30.0% | |
ATTTCATAATTCTACGGTGT+GGG | + | chr3.2:759767-759786 | None:intergenic | 30.0% | |
CAAATTGAATAGTACAGTCA+TGG | + | chr3.2:759866-759885 | None:intergenic | 30.0% | |
CACCTAAAAAAATTATTGCC+TGG | + | chr3.2:762425-762444 | None:intergenic | 30.0% | |
CATGACTGTACTATTCAATT+TGG | - | chr3.2:759864-759883 | MS.gene009304:intron | 30.0% | |
CCACTTATTCCAGAATTATA+TGG | - | chr3.2:764882-764901 | MS.gene009304:intron | 30.0% | |
CTTCATTTCTTCCATGAAAA+AGG | - | chr3.2:763745-763764 | MS.gene009304:intron | 30.0% | |
GACAAATATTTGAAAGCAAG+GGG | - | chr3.2:761482-761501 | MS.gene009304:intron | 30.0% | |
GACATGTTAGATAATGTTAG+AGG | + | chr3.2:761834-761853 | None:intergenic | 30.0% | |
GAGTCAAACAAAACATTTGA+AGG | - | chr3.2:762844-762863 | MS.gene009304:CDS | 30.0% | |
GTGTCTATGTCTTTATTCTT+TGG | - | chr3.2:763859-763878 | MS.gene009304:intron | 30.0% | |
GTTGTATATAGATGAGAACA+TGG | + | chr3.2:759186-759205 | None:intergenic | 30.0% | |
TAAGCTCATAATGTATGTTC+AGG | - | chr3.2:763824-763843 | MS.gene009304:intron | 30.0% | |
TAATGTATGTTCAGGATGAT+AGG | - | chr3.2:763832-763851 | MS.gene009304:intron | 30.0% | |
TACTACACAAACATGATAGT+TGG | + | chr3.2:761074-761093 | None:intergenic | 30.0% | |
TATCAAGGTACATCTCTATT+AGG | - | chr3.2:759230-759249 | MS.gene009304:intron | 30.0% | |
TATTTCATAATTCTACGGTG+TGG | + | chr3.2:759768-759787 | None:intergenic | 30.0% | |
TCTTAGTTACTGAATCAACT+AGG | + | chr3.2:762978-762997 | None:intergenic | 30.0% | |
TGAGAAAAAAATACTTAGCC+TGG | - | chr3.2:761513-761532 | MS.gene009304:intron | 30.0% | |
TGGTTACCAGAAAATTGTAT+TGG | + | chr3.2:761782-761801 | None:intergenic | 30.0% | |
TGTATGAGTGCTTAAAACTA+CGG | + | chr3.2:764451-764470 | None:intergenic | 30.0% | |
TTAAAGGAAGGGAATTTAAG+TGG | - | chr3.2:760093-760112 | MS.gene009304:intron | 30.0% | |
TTATAATGCAGTATGGTGTT+GGG | - | chr3.2:761146-761165 | MS.gene009304:intron | 30.0% | |
TTTAACTGAAGAATGAGTTG+TGG | - | chr3.2:763986-764005 | MS.gene009304:intron | 30.0% | |
! | AAATTTAACGTCTGGTTTGA+AGG | - | chr3.2:760435-760454 | MS.gene009304:intron | 30.0% |
! | ACATTGGAATTGATTTAGCA+CGG | - | chr3.2:763218-763237 | MS.gene009304:intron | 30.0% |
! | AGTTACGATTCCTTTATTTC+AGG | - | chr3.2:764625-764644 | MS.gene009304:intron | 30.0% |
! | ATCTTTAACGATTGGTTCAA+CGG | + | chr3.2:763063-763082 | None:intergenic | 30.0% |
! | CGATACAATTATGGTTAGTT+GGG | - | chr3.2:762808-762827 | MS.gene009304:intron | 30.0% |
! | CTATCGGTGATACTTTATTT+GGG | - | chr3.2:762192-762211 | MS.gene009304:intron | 30.0% |
! | GTTACGATTCCTTTATTTCA+GGG | - | chr3.2:764626-764645 | MS.gene009304:intron | 30.0% |
! | GTTGATTCAGTAACTAAGAT+CGG | - | chr3.2:762979-762998 | MS.gene009304:intron | 30.0% |
! | GTTTTATATAGGCTAGATTG+GGG | - | chr3.2:764528-764547 | MS.gene009304:intron | 30.0% |
! | TTCTCTGAACATTGATTAGA+GGG | + | chr3.2:760540-760559 | None:intergenic | 30.0% |
! | TTTCTCTGAACATTGATTAG+AGG | + | chr3.2:760541-760560 | None:intergenic | 30.0% |
!! | ACAAAAGCACTTTAAGCATA+GGG | + | chr3.2:764933-764952 | None:intergenic | 30.0% |
!! | ACATAGTTTGTTACGTTAAG+TGG | - | chr3.2:759708-759727 | MS.gene009304:intron | 30.0% |
!! | CCATATAATTCTGGAATAAG+TGG | + | chr3.2:764885-764904 | None:intergenic | 30.0% |
!! | GAAACCATGTTCAGTTTTAA+AGG | - | chr3.2:761739-761758 | MS.gene009304:intron | 30.0% |
!! | GTTGTTTTACTATAGGTTGT+TGG | - | chr3.2:765024-765043 | MS.gene009304:CDS | 30.0% |
!! | TACAAAAGCACTTTAAGCAT+AGG | + | chr3.2:764934-764953 | None:intergenic | 30.0% |
!! | TATCTTTAGGACGTAATAAG+TGG | - | chr3.2:760701-760720 | MS.gene009304:CDS | 30.0% |
!! | TTAACATGTAACTTGTTCCT+AGG | - | chr3.2:762663-762682 | MS.gene009304:intron | 30.0% |
!!! | CTTGGATATGATGTTTTTTC+AGG | - | chr3.2:763703-763722 | MS.gene009304:intron | 30.0% |
!!! | TAGATATTCATTTTGGGGTT+CGG | - | chr3.2:763193-763212 | MS.gene009304:intron | 30.0% |
AAAAGCAATGGCATATGCTT+TGG | - | chr3.2:760495-760514 | MS.gene009304:intron | 35.0% | |
AAAATCTGCATGACAAAACC+AGG | - | chr3.2:761672-761691 | MS.gene009304:intron | 35.0% | |
AAAGCAATGGCATATGCTTT+GGG | - | chr3.2:760496-760515 | MS.gene009304:intron | 35.0% | |
AAATGAAGAGAGGGTAATAG+TGG | - | chr3.2:760599-760618 | MS.gene009304:intron | 35.0% | |
AACTTCCTGGATTTAAAGGA+AGG | - | chr3.2:760081-760100 | MS.gene009304:intron | 35.0% | |
AAGCTGTCTATTGCATTTGT+AGG | - | chr3.2:761009-761028 | MS.gene009304:intron | 35.0% | |
AAGTGTAATACGAAAGTGGT+GGG | + | chr3.2:760949-760968 | None:intergenic | 35.0% | |
AATATGAATTGGATTGCCTC+TGG | + | chr3.2:759811-759830 | None:intergenic | 35.0% | |
AATTCCCTTCCTTTAAATCC+AGG | + | chr3.2:760089-760108 | None:intergenic | 35.0% | |
AATTGCTTTGGCATAAGCTT+GGG | - | chr3.2:761880-761899 | MS.gene009304:intron | 35.0% | |
ACACATTCTTATACATCACC+AGG | + | chr3.2:761534-761553 | None:intergenic | 35.0% | |
ACTAACTCAATTCCTGTCAA+AGG | + | chr3.2:765081-765100 | None:intergenic | 35.0% | |
ACTTCCTGGATTTAAAGGAA+GGG | - | chr3.2:760082-760101 | MS.gene009304:intron | 35.0% | |
AGCTTATGCCAAAGCAATTA+TGG | + | chr3.2:761879-761898 | None:intergenic | 35.0% | |
ATAGTACAGTCATGGAACTT+TGG | + | chr3.2:759858-759877 | None:intergenic | 35.0% | |
ATCTAACATGTCCTCATGTT+TGG | - | chr3.2:761842-761861 | MS.gene009304:intron | 35.0% | |
ATGATAAAAATCTGTCCTCC+TGG | - | chr3.2:764010-764029 | MS.gene009304:intron | 35.0% | |
ATTAACTAAGCCTAGTATGC+TGG | - | chr3.2:763655-763674 | MS.gene009304:intron | 35.0% | |
CAATTTAGGCTGAATCGATT+CGG | - | chr3.2:759512-759531 | MS.gene009304:CDS | 35.0% | |
CACAGAAGTAAATGAAGAGA+GGG | - | chr3.2:760590-760609 | MS.gene009304:intron | 35.0% | |
CCTATCGGTGATACTTTATT+TGG | - | chr3.2:762191-762210 | MS.gene009304:intron | 35.0% | |
CGTTAAATTTCTTGCACAAC+AGG | + | chr3.2:760425-760444 | None:intergenic | 35.0% | |
CTGAACATGGTTTCTACAAT+TGG | + | chr3.2:761733-761752 | None:intergenic | 35.0% | |
CTTATAATGCAGTATGGTGT+TGG | - | chr3.2:761145-761164 | MS.gene009304:intron | 35.0% | |
CTTGGTCAAAGATAAACAGA+CGG | - | chr3.2:760268-760287 | MS.gene009304:intron | 35.0% | |
GAAGATACTATACTTGCTTG+CGG | + | chr3.2:761385-761404 | None:intergenic | 35.0% | |
GAATACCCAAATTTGATTCC+TGG | - | chr3.2:759534-759553 | MS.gene009304:CDS | 35.0% | |
GATGATCTTGTTGATGTGAA+GGG | - | chr3.2:763427-763446 | MS.gene009304:intron | 35.0% | |
GCGATACAATTATGGTTAGT+TGG | - | chr3.2:762807-762826 | MS.gene009304:intron | 35.0% | |
GGTTAACTTCCTGGATTTAA+AGG | - | chr3.2:760077-760096 | MS.gene009304:intron | 35.0% | |
GTATGAGTGCTTAAAACTAC+GGG | + | chr3.2:764450-764469 | None:intergenic | 35.0% | |
TAATTGCTTTGGCATAAGCT+TGG | - | chr3.2:761879-761898 | MS.gene009304:intron | 35.0% | |
TAGAGATGTACCTTGATAGA+TGG | + | chr3.2:759228-759247 | None:intergenic | 35.0% | |
TCCTTTGAACTGCTTTATGA+CGG | - | chr3.2:759928-759947 | MS.gene009304:intron | 35.0% | |
TCGGTTCATGATACGTTAAA+TGG | + | chr3.2:760467-760486 | None:intergenic | 35.0% | |
TCTAACATGTCCTCATGTTT+GGG | - | chr3.2:761843-761862 | MS.gene009304:intron | 35.0% | |
TCTAGCAACATTAACCAGAA+GGG | + | chr3.2:764654-764673 | None:intergenic | 35.0% | |
TGATAAAAATCTGTCCTCCT+GGG | - | chr3.2:764011-764030 | MS.gene009304:intron | 35.0% | |
TGATGATCTTGTTGATGTGA+AGG | - | chr3.2:763426-763445 | MS.gene009304:intron | 35.0% | |
TGTACTATTCATGTGCTTCT+AGG | - | chr3.2:762590-762609 | MS.gene009304:intron | 35.0% | |
TGTGCAAGAAATTTAACGTC+TGG | - | chr3.2:760427-760446 | MS.gene009304:intron | 35.0% | |
TGTGTTCCTAAAACACAGAA+TGG | + | chr3.2:763931-763950 | None:intergenic | 35.0% | |
TTCCAAGTGTAATACGAAAG+TGG | + | chr3.2:760953-760972 | None:intergenic | 35.0% | |
TTCTTATGTGCAGGAAATGA+TGG | - | chr3.2:760638-760657 | MS.gene009304:intron | 35.0% | |
TTGGTCAAAGATAAACAGAC+GGG | - | chr3.2:760269-760288 | MS.gene009304:intron | 35.0% | |
TTTAACGTATCATGAACCGA+TGG | - | chr3.2:760467-760486 | MS.gene009304:CDS | 35.0% | |
TTTAAGGGGTTAATCTTGGA+TGG | + | chr3.2:763777-763796 | None:intergenic | 35.0% | |
TTTCATAATTCTACGGTGTG+GGG | + | chr3.2:759766-759785 | None:intergenic | 35.0% | |
! | CCAAATAAAGTATCACCGAT+AGG | + | chr3.2:762194-762213 | None:intergenic | 35.0% |
! | TAATCTGAAATTCGGCTAGA+AGG | + | chr3.2:759585-759604 | None:intergenic | 35.0% |
! | TATCATTTGGGTTAACTTCC+TGG | - | chr3.2:760068-760087 | MS.gene009304:intron | 35.0% |
! | TCATCGCCAATACAATTTTC+TGG | - | chr3.2:761773-761792 | MS.gene009304:intron | 35.0% |
! | TGGTTAGTTGGGTTGTAAAT+AGG | - | chr3.2:762819-762838 | MS.gene009304:intron | 35.0% |
! | TTAAAATTGGTGATCTTGGG+TGG | - | chr3.2:760564-760583 | MS.gene009304:intron | 35.0% |
!! | GATGGTACAAACCTTTTTCA+TGG | + | chr3.2:763759-763778 | None:intergenic | 35.0% |
!! | GTTAAGGGTATCCAATCTAA+TGG | - | chr3.2:760141-760160 | MS.gene009304:intron | 35.0% |
!! | TTTTAACTCTTCGGTTCACA+GGG | + | chr3.2:759614-759633 | None:intergenic | 35.0% |
!!! | ACCATGTTCAGTTTTAAAGG+CGG | - | chr3.2:761742-761761 | MS.gene009304:intron | 35.0% |
!!! | AGATATTCATTTTGGGGTTC+GGG | - | chr3.2:763194-763213 | MS.gene009304:intron | 35.0% |
!!! | CTTGCCTGTTGTTTTACTAT+AGG | - | chr3.2:765017-765036 | MS.gene009304:CDS | 35.0% |
!!! | GATATGATGTTTTTTCAGGC+TGG | - | chr3.2:763707-763726 | MS.gene009304:intron | 35.0% |
!!! | TGGTTTTGTCATGCAGATTT+TGG | + | chr3.2:761673-761692 | None:intergenic | 35.0% |
AAATGTCTGCGATCACTACT+GGG | + | chr3.2:764502-764521 | None:intergenic | 40.0% | |
AACCTTAGCCATGGATCTAT+AGG | + | chr3.2:764843-764862 | None:intergenic | 40.0% | |
AAGTAGCAGAAGTAGAAGCT+TGG | + | chr3.2:763574-763593 | None:intergenic | 40.0% | |
AATCTGACAATCACTGGAAC+TGG | - | chr3.2:759961-759980 | MS.gene009304:intron | 40.0% | |
ACAATTGAGTCATCTCCATC+AGG | + | chr3.2:761571-761590 | None:intergenic | 40.0% | |
ACAGCCTCATAGTCTAAAAG+AGG | + | chr3.2:764680-764699 | None:intergenic | 40.0% | |
ACGTTAAGTGGCTTCCTATT+TGG | - | chr3.2:759720-759739 | MS.gene009304:intron | 40.0% | |
AGAACACTCCTATAGATCCA+TGG | - | chr3.2:764832-764851 | MS.gene009304:intron | 40.0% | |
AGAGAGGGTAATAGTGGTTA+TGG | - | chr3.2:760605-760624 | MS.gene009304:intron | 40.0% | |
AGCATGGAATCAAAGTTGCT+AGG | - | chr3.2:761288-761307 | MS.gene009304:intron | 40.0% | |
AGCCGAATTTCAGATTACCA+AGG | - | chr3.2:759588-759607 | MS.gene009304:intron | 40.0% | |
AGCTCGACTGACAATAATCA+CGG | + | chr3.2:761182-761201 | None:intergenic | 40.0% | |
AGTTCCAGTGATTGTCAGAT+TGG | + | chr3.2:759962-759981 | None:intergenic | 40.0% | |
AGTTTCTTACAGAATACCGC+TGG | + | chr3.2:760119-760138 | None:intergenic | 40.0% | |
ATAACCACGGCTCAATTGTA+AGG | + | chr3.2:764043-764062 | None:intergenic | 40.0% | |
ATCATGACTCCTCATATTGC+AGG | - | chr3.2:764803-764822 | MS.gene009304:intron | 40.0% | |
ATCCAATCTAATGGAGTCGT+TGG | - | chr3.2:760150-760169 | MS.gene009304:intron | 40.0% | |
ATCTGATCATCGGGATCAAA+TGG | + | chr3.2:764764-764783 | None:intergenic | 40.0% | |
ATGATAGTTGGCAATAGCCT+TGG | + | chr3.2:761062-761081 | None:intergenic | 40.0% | |
ATGGAATCAGCCAACAACAT+AGG | - | chr3.2:760657-760676 | MS.gene009304:intron | 40.0% | |
ATGTCCTCATGTTTGGGTAT+GGG | - | chr3.2:761849-761868 | MS.gene009304:intron | 40.0% | |
CAAGTGTAATACGAAAGTGG+TGG | + | chr3.2:760950-760969 | None:intergenic | 40.0% | |
CACCACTTTCGTATTACACT+TGG | - | chr3.2:760948-760967 | MS.gene009304:CDS | 40.0% | |
CAGAATGGCAGTTAAGAAAC+AGG | - | chr3.2:760373-760392 | MS.gene009304:intron | 40.0% | |
CAGGAGTGATGAATACAGAA+TGG | - | chr3.2:760358-760377 | MS.gene009304:intron | 40.0% | |
CATCGATATCAACACCTAAG+AGG | + | chr3.2:761259-761278 | None:intergenic | 40.0% | |
CGAGAAGAGAAAAAGATGCA+GGG | + | chr3.2:761975-761994 | None:intergenic | 40.0% | |
CGTTGGAGAAGAATGTTGAA+GGG | - | chr3.2:760167-760186 | MS.gene009304:intron | 40.0% | |
CTCTAGCAACATTAACCAGA+AGG | + | chr3.2:764655-764674 | None:intergenic | 40.0% | |
GCACAGAAGTAAATGAAGAG+AGG | - | chr3.2:760589-760608 | MS.gene009304:intron | 40.0% | |
GCAGAATCATCCATCTATCA+AGG | - | chr3.2:759215-759234 | MS.gene009304:intron | 40.0% | |
GCAGGTCAACTAAAAGAAAC+TGG | - | chr3.2:761806-761825 | MS.gene009304:intron | 40.0% | |
GCCAAAAATTCCAGCATACT+AGG | + | chr3.2:763668-763687 | None:intergenic | 40.0% | |
GTAAAAGTTGCACCACATGA+GGG | + | chr3.2:763116-763135 | None:intergenic | 40.0% | |
GTGAAGATGCAAAAACTGCT+TGG | - | chr3.2:760250-760269 | MS.gene009304:intron | 40.0% | |
GTGGTCAAAAACCTTGAATC+CGG | - | chr3.2:764698-764717 | MS.gene009304:intron | 40.0% | |
TAACCACGGCTCAATTGTAA+GGG | + | chr3.2:764042-764061 | None:intergenic | 40.0% | |
TATTGCTACAAAGCGGAGTT+GGG | - | chr3.2:763267-763286 | MS.gene009304:intron | 40.0% | |
TCATCAAAAGCAATGTCCCA+TGG | + | chr3.2:762288-762307 | None:intergenic | 40.0% | |
TCCAGCCAGGAATCAAATTT+GGG | + | chr3.2:759542-759561 | None:intergenic | 40.0% | |
TCCGTCATAAAGCAGTTCAA+AGG | + | chr3.2:759932-759951 | None:intergenic | 40.0% | |
TCGTTGGAGAAGAATGTTGA+AGG | - | chr3.2:760166-760185 | MS.gene009304:intron | 40.0% | |
TGATAGTTGGCAATAGCCTT+GGG | + | chr3.2:761061-761080 | None:intergenic | 40.0% | |
TGCAGATTTCCATACAGCAA+AGG | - | chr3.2:762156-762175 | MS.gene009304:intron | 40.0% | |
TGGGAAAGCCATAATTGCTT+TGG | - | chr3.2:761868-761887 | MS.gene009304:intron | 40.0% | |
TGTAAAAGTTGCACCACATG+AGG | + | chr3.2:763117-763136 | None:intergenic | 40.0% | |
TTATTGCTACAAAGCGGAGT+TGG | - | chr3.2:763266-763285 | MS.gene009304:intron | 40.0% | |
TTCAGTTGCATGTGCTGAAA+TGG | - | chr3.2:761334-761353 | MS.gene009304:intron | 40.0% | |
TTCCAGCCAGGAATCAAATT+TGG | + | chr3.2:759543-759562 | None:intergenic | 40.0% | |
TTTCAGTTACGCTATCCTGA+TGG | - | chr3.2:761553-761572 | MS.gene009304:intron | 40.0% | |
! | AGGAGTTACCAGCTTTTGAT+GGG | - | chr3.2:760393-760412 | MS.gene009304:intron | 40.0% |
! | AGGTCCTCTTTTAGACTATG+AGG | - | chr3.2:764673-764692 | MS.gene009304:intron | 40.0% |
! | ATGAGTAGTGGAATGAATGG+AGG | - | chr3.2:760207-760226 | MS.gene009304:intron | 40.0% |
! | CAAGGTCCATTCTGTGTTTT+AGG | - | chr3.2:763922-763941 | MS.gene009304:intron | 40.0% |
! | CACTAATAGTCGCTCTGAAT+TGG | + | chr3.2:760233-760252 | None:intergenic | 40.0% |
! | CATTTGTTTCTTCCCTCATG+TGG | - | chr3.2:763101-763120 | MS.gene009304:CDS | 40.0% |
! | CTGAACATTGATTAGAGGGA+CGG | + | chr3.2:760536-760555 | None:intergenic | 40.0% |
! | CTTAAAAAGGAGCGTGAAGT+GGG | - | chr3.2:762391-762410 | MS.gene009304:intron | 40.0% |
! | CTTCTGGTTAATGTTGCTAG+AGG | - | chr3.2:764653-764672 | MS.gene009304:intron | 40.0% |
! | GCCTAGTATGCTGGAATTTT+TGG | - | chr3.2:763664-763683 | MS.gene009304:intron | 40.0% |
! | GGCATGCATACTTATTGACT+TGG | - | chr3.2:763685-763704 | MS.gene009304:intron | 40.0% |
! | GGCCTTGGTAATCTGAAATT+CGG | + | chr3.2:759593-759612 | None:intergenic | 40.0% |
! | TACTTCTGCTACTTCTAGCT+AGG | - | chr3.2:763580-763599 | MS.gene009304:intron | 40.0% |
! | TCTTTTAGACTATGAGGCTG+TGG | - | chr3.2:764679-764698 | MS.gene009304:intron | 40.0% |
! | TTTTGTCCAGGTGCACAAAA+GGG | + | chr3.2:762003-762022 | None:intergenic | 40.0% |
! | TTTTTGTCCAGGTGCACAAA+AGG | + | chr3.2:762004-762023 | None:intergenic | 40.0% |
!! | ACCGCCTTTAAAACTGAACA+TGG | + | chr3.2:761746-761765 | None:intergenic | 40.0% |
!! | ACTATAGGTTGTTGGTGATG+TGG | - | chr3.2:765032-765051 | MS.gene009304:CDS | 40.0% |
!! | ACTGAAATAGATCGGCTTGT+TGG | - | chr3.2:762901-762920 | MS.gene009304:CDS | 40.0% |
!! | CTGAAATAGATCGGCTTGTT+GGG | - | chr3.2:762902-762921 | MS.gene009304:CDS | 40.0% |
!! | GAGGCTCTGAAATTCATGTA+AGG | - | chr3.2:762624-762643 | MS.gene009304:intron | 40.0% |
!! | TGATGATGGTTAGTTGCATG+AGG | - | chr3.2:762302-762321 | MS.gene009304:intron | 40.0% |
!! | TGGGACATTGCTTTTGATGA+TGG | - | chr3.2:762288-762307 | MS.gene009304:intron | 40.0% |
!! | TGTCAGTCGAGCTTTATTGA+TGG | - | chr3.2:761189-761208 | MS.gene009304:intron | 40.0% |
!! | TTTAGGTGTCTGATGGACTT+TGG | - | chr3.2:762437-762456 | MS.gene009304:intron | 40.0% |
!! | TTTCTTTTAGTTGACCTGCG+AGG | + | chr3.2:761805-761824 | None:intergenic | 40.0% |
!! | TTTGATTTGTTCAGTGCTCC+TGG | + | chr3.2:761693-761712 | None:intergenic | 40.0% |
!!! | GCATGACAGATTTTTTGTCC+AGG | + | chr3.2:762015-762034 | None:intergenic | 40.0% |
!!! | GGATGTGTTTTTTGATCCAG+AGG | - | chr3.2:759792-759811 | MS.gene009304:intron | 40.0% |
!!! | GTTTTAACTCTTCGGTTCAC+AGG | + | chr3.2:759615-759634 | None:intergenic | 40.0% |
AACCTTGAATCCGGACACTT+AGG | - | chr3.2:764707-764726 | MS.gene009304:intron | 45.0% | |
AAGGGAATTTAAGTGGCCAG+CGG | - | chr3.2:760100-760119 | MS.gene009304:intron | 45.0% | |
AAGTAGCAATCCACGAGAAC+AGG | + | chr3.2:763341-763360 | None:intergenic | 45.0% | |
AATCACTGGAACTGGTGTGA+TGG | - | chr3.2:759969-759988 | MS.gene009304:intron | 45.0% | |
AATGCTCAGAGGAGATTCCT+AGG | + | chr3.2:762683-762702 | None:intergenic | 45.0% | |
AATTTCCAGTAGCACCACTG+GGG | + | chr3.2:761316-761335 | None:intergenic | 45.0% | |
ACACACACACACACACATGT+AGG | - | chr3.2:763897-763916 | MS.gene009304:intron | 45.0% | |
ACCCAAATTTGATTCCTGGC+TGG | - | chr3.2:759538-759557 | MS.gene009304:CDS | 45.0% | |
AGATGAGAACATGGGAACTG+AGG | + | chr3.2:759177-759196 | None:intergenic | 45.0% | |
AGGGATGCTACACATGAGTA+CGG | - | chr3.2:762783-762802 | MS.gene009304:intron | 45.0% | |
AGTACGGGGCGATACAATTA+TGG | - | chr3.2:762799-762818 | MS.gene009304:intron | 45.0% | |
AGTAGCAATCCACGAGAACA+GGG | + | chr3.2:763340-763359 | None:intergenic | 45.0% | |
AGTAGCCTAAGGCTGTAAGT+TGG | - | chr3.2:764211-764230 | MS.gene009304:intron | 45.0% | |
ATCCATGGCTAAGGTTTGTG+TGG | - | chr3.2:764847-764866 | MS.gene009304:intron | 45.0% | |
ATCGATGCTGCAACAAAGCA+TGG | - | chr3.2:761272-761291 | MS.gene009304:intron | 45.0% | |
CAAAGATAAACAGACGGGCA+CGG | - | chr3.2:760274-760293 | MS.gene009304:intron | 45.0% | |
CAATTGTAAGGGAACATCCC+AGG | + | chr3.2:764031-764050 | None:intergenic | 45.0% | |
CACACACACACACACATGTA+GGG | - | chr3.2:763898-763917 | MS.gene009304:intron | 45.0% | |
CATGCTGGAAATCCTTTGAC+AGG | - | chr3.2:765066-765085 | MS.gene009304:CDS | 45.0% | |
CATGTCCTCATGTTTGGGTA+TGG | - | chr3.2:761848-761867 | MS.gene009304:intron | 45.0% | |
CCTTGGGAATTTCTTCCAAC+GGG | + | chr3.2:761045-761064 | None:intergenic | 45.0% | |
CTCCAACGACTCCATTAGAT+TGG | + | chr3.2:760155-760174 | None:intergenic | 45.0% | |
CTCCTATAGATCCATGGCTA+AGG | - | chr3.2:764838-764857 | MS.gene009304:intron | 45.0% | |
CTTTCCCATACCCAAACATG+AGG | + | chr3.2:761856-761875 | None:intergenic | 45.0% | |
GAAATGTCTGCGATCACTAC+TGG | + | chr3.2:764503-764522 | None:intergenic | 45.0% | |
GAATTTCCAGTAGCACCACT+GGG | + | chr3.2:761317-761336 | None:intergenic | 45.0% | |
GAGATCATCCTCTAACCAAG+TGG | - | chr3.2:759464-759483 | MS.gene009304:CDS | 45.0% | |
GATGCCAATCTGACAATCAC+TGG | - | chr3.2:759955-759974 | MS.gene009304:intron | 45.0% | |
GCACGGCGATTGAAACTATT+TGG | - | chr3.2:763235-763254 | MS.gene009304:intron | 45.0% | |
GCCTTGGGAATTTCTTCCAA+CGG | + | chr3.2:761046-761065 | None:intergenic | 45.0% | |
GCGAGAAGAGAAAAAGATGC+AGG | + | chr3.2:761976-761995 | None:intergenic | 45.0% | |
GTGGTTCTTCAACTTCATGC+TGG | - | chr3.2:765051-765070 | MS.gene009304:CDS | 45.0% | |
TCATCCTCTAACCAAGTGGA+TGG | - | chr3.2:759468-759487 | MS.gene009304:CDS | 45.0% | |
TCCATACAGCAAAGGAAGCT+TGG | - | chr3.2:762164-762183 | MS.gene009304:intron | 45.0% | |
TCCTCAAGTCAGCATGTGAT+TGG | + | chr3.2:764253-764272 | None:intergenic | 45.0% | |
TCTGTAACGCCTGCAATATG+AGG | + | chr3.2:764815-764834 | None:intergenic | 45.0% | |
TGAATTTCCAGTAGCACCAC+TGG | + | chr3.2:761318-761337 | None:intergenic | 45.0% | |
TTGAATCCGGACACTTAGGA+GGG | - | chr3.2:764711-764730 | MS.gene009304:intron | 45.0% | |
TTGGTTCAACGGAACAGGTT+AGG | + | chr3.2:763052-763071 | None:intergenic | 45.0% | |
! | AACGATTGGTTCAACGGAAC+AGG | + | chr3.2:763057-763076 | None:intergenic | 45.0% |
! | AACTAAGATCGGCTCAAGCT+AGG | - | chr3.2:762990-763009 | MS.gene009304:intron | 45.0% |
! | AATGGCATATGCTTTGGGTG+CGG | - | chr3.2:760501-760520 | MS.gene009304:intron | 45.0% |
! | ATTTTCCTTCCCTGTTCTCG+TGG | - | chr3.2:763328-763347 | MS.gene009304:intron | 45.0% |
! | CAGAGCTGATTCTTATGTGC+AGG | - | chr3.2:760629-760648 | MS.gene009304:intron | 45.0% |
! | CAGGAGTTACCAGCTTTTGA+TGG | - | chr3.2:760392-760411 | MS.gene009304:intron | 45.0% |
! | CCACTTCACGCTCCTTTTTA+AGG | + | chr3.2:762393-762412 | None:intergenic | 45.0% |
! | CCTTAAAAAGGAGCGTGAAG+TGG | - | chr3.2:762390-762409 | MS.gene009304:intron | 45.0% |
! | CTAGAAGGTACGTCTGACTA+AGG | + | chr3.2:759570-759589 | None:intergenic | 45.0% |
! | GGAGTTACCAGCTTTTGATG+GGG | - | chr3.2:760394-760413 | MS.gene009304:intron | 45.0% |
! | GGCATGAGTAGTGGAATGAA+TGG | - | chr3.2:760204-760223 | MS.gene009304:intron | 45.0% |
! | GTAAGTTGGAGGACATAGTG+AGG | - | chr3.2:764225-764244 | MS.gene009304:intron | 45.0% |
! | TCCAAGCTTCCTTTGCTGTA+TGG | + | chr3.2:762168-762187 | None:intergenic | 45.0% |
! | TTTATTTCAGGGTGCCCTTC+TGG | - | chr3.2:764637-764656 | MS.gene009304:intron | 45.0% |
!! | AATGTTGAAGGGCTAGCTTC+TGG | - | chr3.2:760178-760197 | MS.gene009304:intron | 45.0% |
!! | AGAAGGGCACCCTGAAATAA+AGG | + | chr3.2:764638-764657 | None:intergenic | 45.0% |
!! | ATGTTGAAGGGCTAGCTTCT+GGG | - | chr3.2:760179-760198 | MS.gene009304:intron | 45.0% |
!! | CCATTGCTTTTCCTCTCCAT+CGG | + | chr3.2:760486-760505 | None:intergenic | 45.0% |
!! | TCCAATCACATGCTGACTTG+AGG | - | chr3.2:764249-764268 | MS.gene009304:intron | 45.0% |
!!! | ACGTCGCGTGTTTTGTTTTG+TGG | - | chr3.2:759150-759169 | MS.gene009304:CDS | 45.0% |
!!! | ATTTTGGGGTTCGGGAACAT+TGG | - | chr3.2:763202-763221 | MS.gene009304:intron | 45.0% |
AAAGTTGCTAGGATCCCCAG+TGG | - | chr3.2:761299-761318 | MS.gene009304:intron | 50.0% | |
AGCCACACAAACCTTAGCCA+TGG | + | chr3.2:764852-764871 | None:intergenic | 50.0% | |
AGCTAGGTCTGATGTAGGCT+AGG | - | chr3.2:763006-763025 | MS.gene009304:intron | 50.0% | |
AGGAACCGATGTTGCATGGA+CGG | - | chr3.2:764736-764755 | MS.gene009304:intron | 50.0% | |
AGGAAGCTTGGAGAGCCTAT+CGG | - | chr3.2:762176-762195 | MS.gene009304:intron | 50.0% | |
ATCACTCGAGACCATCCACT+TGG | + | chr3.2:759482-759501 | None:intergenic | 50.0% | |
ATGTGCTTCTAGGCTGTCTC+TGG | - | chr3.2:762600-762619 | MS.gene009304:intron | 50.0% | |
CAAAACTGAGCTGTAGCAGC+AGG | - | chr3.2:760339-760358 | MS.gene009304:intron | 50.0% | |
CACACACACATGTAGGGTCA+AGG | - | chr3.2:763904-763923 | MS.gene009304:intron | 50.0% | |
CCCGTTGGAAGAAATTCCCA+AGG | - | chr3.2:761042-761061 | MS.gene009304:intron | 50.0% | |
CCGATGGAGAGGAAAAGCAA+TGG | - | chr3.2:760483-760502 | MS.gene009304:intron | 50.0% | |
CGTATCATGAACCGATGGAG+AGG | - | chr3.2:760472-760491 | MS.gene009304:intron | 50.0% | |
CTCCTAAGTGTCCGGATTCA+AGG | + | chr3.2:764712-764731 | None:intergenic | 50.0% | |
CTTGAATCCGGACACTTAGG+AGG | - | chr3.2:764710-764729 | MS.gene009304:intron | 50.0% | |
GACTAAGGATTGTTCCAGCC+AGG | + | chr3.2:759555-759574 | None:intergenic | 50.0% | |
GAGACCATCCACTTGGTTAG+AGG | + | chr3.2:759475-759494 | None:intergenic | 50.0% | |
GCTCAAGCTAGGTCTGATGT+AGG | - | chr3.2:763001-763020 | MS.gene009304:intron | 50.0% | |
GGATGCTACACATGAGTACG+GGG | - | chr3.2:762785-762804 | MS.gene009304:intron | 50.0% | |
GGATTTGCCCCATCAAAAGC+TGG | + | chr3.2:760404-760423 | None:intergenic | 50.0% | |
GGGATGCTACACATGAGTAC+GGG | - | chr3.2:762784-762803 | MS.gene009304:intron | 50.0% | |
GGTATCTATCATGGGGCTTG+TGG | - | chr3.2:760810-760829 | MS.gene009304:intron | 50.0% | |
GTCCTCCAACTTACAGCCTT+AGG | + | chr3.2:764219-764238 | None:intergenic | 50.0% | |
GTGAAGTGGGTAGATGATCC+AGG | - | chr3.2:762404-762423 | MS.gene009304:intron | 50.0% | |
GTTCCCTTACAATTGAGCCG+TGG | - | chr3.2:764036-764055 | MS.gene009304:intron | 50.0% | |
TCCAGGTGCACAAAAGGGAA+TGG | + | chr3.2:761998-762017 | None:intergenic | 50.0% | |
TCTGATGTAGGCTAGGCCAT+AGG | - | chr3.2:763013-763032 | MS.gene009304:intron | 50.0% | |
TTCAACGGAACAGGTTAGGC+CGG | + | chr3.2:763048-763067 | None:intergenic | 50.0% | |
TTGTAAGGGAACATCCCAGG+AGG | + | chr3.2:764028-764047 | None:intergenic | 50.0% | |
! | AATGCAGTATGGTGTTGGGC+TGG | - | chr3.2:761150-761169 | MS.gene009304:intron | 50.0% |
! | AGCCTAAGGCTGTAAGTTGG+AGG | - | chr3.2:764214-764233 | MS.gene009304:intron | 50.0% |
! | CTGCTGCTACAGCTCAGTTT+TGG | + | chr3.2:760341-760360 | None:intergenic | 50.0% |
! | TATGCTTTGGGTGCGGAGAA+AGG | - | chr3.2:760508-760527 | MS.gene009304:intron | 50.0% |
!! | CTTTTAGTTGACCTGCGAGG+TGG | + | chr3.2:761802-761821 | None:intergenic | 50.0% |
!! | GTAGGTTGATGTTCTCCCGT+TGG | - | chr3.2:761027-761046 | MS.gene009304:intron | 50.0% |
!! | TTCTGGGTTGGCATGAGTAG+TGG | - | chr3.2:760195-760214 | MS.gene009304:intron | 50.0% |
!! | TTTTCTGGTAACCACCTCGC+AGG | - | chr3.2:761788-761807 | MS.gene009304:intron | 50.0% |
AGGCCATAGGCTCCAATGAC+CGG | - | chr3.2:763026-763045 | MS.gene009304:intron | 55.0% | |
CTACTGGGTTCAAGCGCAAG+AGG | + | chr3.2:764487-764506 | None:intergenic | 55.0% | |
GAACAGGTTAGGCCGGTCAT+TGG | + | chr3.2:763041-763060 | None:intergenic | 55.0% | |
GCAATCCACGAGAACAGGGA+AGG | + | chr3.2:763336-763355 | None:intergenic | 55.0% | |
GGCTAGGAACCGATGTTGCA+TGG | - | chr3.2:764732-764751 | MS.gene009304:intron | 55.0% | |
TCCTAGCCCTCCTAAGTGTC+CGG | + | chr3.2:764720-764739 | None:intergenic | 55.0% | |
TGGCTCCGTCCATGCAACAT+CGG | + | chr3.2:764744-764763 | None:intergenic | 55.0% | |
TGGGTTCAAGCGCAAGAGGT+TGG | + | chr3.2:764483-764502 | None:intergenic | 55.0% | |
! | CAGTATGGTGTTGGGCTGGA+AGG | - | chr3.2:761154-761173 | MS.gene009304:intron | 55.0% |
! | CTTCTAGGCTGTCTCTGGAG+AGG | - | chr3.2:762605-762624 | MS.gene009304:intron | 55.0% |
! | GCCATTCCCTTTTGTGCACC+TGG | - | chr3.2:761994-762013 | MS.gene009304:intron | 55.0% |
!! | TGAAGGGCTAGCTTCTGGGT+TGG | - | chr3.2:760183-760202 | MS.gene009304:intron | 55.0% |
AGGCCGGTCATTGGAGCCTA+TGG | + | chr3.2:763032-763051 | None:intergenic | 60.0% | |
CTCTTCGGTTCACAGGGCCT+TGG | + | chr3.2:759608-759627 | None:intergenic | 60.0% | |
TCCGGACACTTAGGAGGGCT+AGG | - | chr3.2:764716-764735 | MS.gene009304:intron | 60.0% | |
!! | AGGATCCCCAGTGGTGCTAC+TGG | - | chr3.2:761308-761327 | MS.gene009304:intron | 60.0% |
!! | AGCGCAAGAGGTTGGTGCGC+AGG | + | chr3.2:764475-764494 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 759108 | 765107 | 759108 | ID=MS.gene009304 |
chr3.2 | mRNA | 759108 | 765107 | 759108 | ID=MS.gene009304.t1;Parent=MS.gene009304 |
chr3.2 | exon | 764979 | 765107 | 764979 | ID=MS.gene009304.t1.exon1;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 764979 | 765107 | 764979 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 763040 | 763184 | 763040 | ID=MS.gene009304.t1.exon2;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 763040 | 763184 | 763040 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 762824 | 762951 | 762824 | ID=MS.gene009304.t1.exon3;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 762824 | 762951 | 762824 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 761995 | 762066 | 761995 | ID=MS.gene009304.t1.exon4;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 761995 | 762066 | 761995 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 760890 | 761019 | 760890 | ID=MS.gene009304.t1.exon5;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 760890 | 761019 | 760890 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 760690 | 760796 | 760690 | ID=MS.gene009304.t1.exon6;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 760690 | 760796 | 760690 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 760449 | 760490 | 760449 | ID=MS.gene009304.t1.exon7;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 760449 | 760490 | 760449 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 759356 | 759568 | 759356 | ID=MS.gene009304.t1.exon8;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 759356 | 759568 | 759356 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
chr3.2 | exon | 759108 | 759176 | 759108 | ID=MS.gene009304.t1.exon9;Parent=MS.gene009304.t1 |
chr3.2 | CDS | 759108 | 759176 | 759108 | ID=cds.MS.gene009304.t1;Parent=MS.gene009304.t1 |
Gene Sequence |
Protein sequence |