Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009396.t1 | XP_003598140.2 | 100 | 440 | 0 | 0 | 1 | 440 | 1 | 440 | 1.60E-261 | 911.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009396.t1 | Q9FLF7 | 85.0 | 434 | 61 | 2 | 7 | 440 | 16 | 445 | 1.7e-219 | 763.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009396.t1 | G7IVB8 | 100.0 | 440 | 0 | 0 | 1 | 440 | 1 | 440 | 1.2e-261 | 911.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009397 | MS.gene009396 | PPI |
| MS.gene009396 | MS.gene058355 | PPI |
| MS.gene009396 | MS.gene56191 | PPI |
| MS.gene009396 | MS.gene51535 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009396.t1 | MTR_3g007710 | 100.000 | 440 | 0 | 0 | 1 | 440 | 1 | 440 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009396.t1 | AT5G64610 | 83.669 | 447 | 64 | 3 | 1 | 440 | 1 | 445 | 0.0 | 768 |
| MS.gene009396.t1 | AT5G09740 | 83.036 | 448 | 65 | 3 | 1 | 440 | 1 | 445 | 0.0 | 768 |
| MS.gene009396.t1 | AT5G09740 | 85.714 | 231 | 31 | 2 | 212 | 440 | 137 | 367 | 4.35e-136 | 395 |
| MS.gene009396.t1 | AT5G09740 | 64.773 | 176 | 51 | 3 | 1 | 168 | 1 | 173 | 1.24e-69 | 225 |
Find 123 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGCAGAATCTTTGTTATT+TGG | 0.168973 | 3.1:-3488839 | MS.gene009396:CDS |
| CAATATATCTTCAGCTTTAA+TGG | 0.187495 | 3.1:+3487695 | None:intergenic |
| GATCAACTTTGTTCTTTATA+AGG | 0.197305 | 3.1:+3487531 | None:intergenic |
| GGCAAGAAGAACAAGGTTTA+TGG | 0.235453 | 3.1:-3488859 | MS.gene009396:CDS |
| AGGTCTGAAAGGGGCCTTTC+AGG | 0.239360 | 3.1:+3488092 | None:intergenic |
| AGATGGCGATCCAAAACTTT+TGG | 0.251790 | 3.1:+3487609 | None:intergenic |
| TTCTGAGGAATCCTACAATT+TGG | 0.272691 | 3.1:-3488309 | MS.gene009396:CDS |
| TCCTGTATTGAATCAGTTCT+AGG | 0.273115 | 3.1:+3487658 | None:intergenic |
| CTGTGCTTCCGTTGGAGGTT+GGG | 0.316088 | 3.1:-3493783 | MS.gene009396:CDS |
| TCTCATCGATCTTCCTCTTC+TGG | 0.332710 | 3.1:+3491501 | None:intergenic |
| TTGATGTTAGCAAATTGATT+TGG | 0.345668 | 3.1:-3487557 | MS.gene009396:CDS |
| TTGTGCGGATCCAAAAGTTT+TGG | 0.348879 | 3.1:-3487619 | MS.gene009396:CDS |
| TCATTGTATTCTGATGGAAA+TGG | 0.388643 | 3.1:+3490916 | None:intergenic |
| ACCGCTCCGGCCGCCGGTCA+CGG | 0.391865 | 3.1:-3493892 | MS.gene009396:CDS |
| GGTTCATACACTCAGTATAA+TGG | 0.398788 | 3.1:+3493656 | None:intergenic |
| CATTGTATTCTGATGGAAAT+GGG | 0.401991 | 3.1:+3490917 | None:intergenic |
| GCGCCCTCCGCCGTCAGATT+CGG | 0.404420 | 3.1:-3493842 | MS.gene009396:CDS |
| GAAACTTGACCAGCTTGATC+TGG | 0.410348 | 3.1:-3492365 | MS.gene009396:CDS |
| ATCTTCTGTGCTTCCGTTGG+AGG | 0.411645 | 3.1:-3493788 | MS.gene009396:CDS |
| CCATAGCCTTTCCTTTGGTA+AGG | 0.412700 | 3.1:+3488266 | None:intergenic |
| CTTCGTTCGATGACTTTGAC+AGG | 0.414188 | 3.1:+3493721 | None:intergenic |
| TTCGGTACCGGAGTACGAAT+TGG | 0.415710 | 3.1:-3493824 | MS.gene009396:CDS |
| TCTGTGCTTCCGTTGGAGGT+TGG | 0.423441 | 3.1:-3493784 | MS.gene009396:CDS |
| GCAAGAAGAACAAGGTTTAT+GGG | 0.425430 | 3.1:-3488858 | MS.gene009396:CDS |
| CGCATGCCGCCATCGGTTAA+CGG | 0.430462 | 3.1:+3493862 | None:intergenic |
| TTTGGTAAGGTGGGAGGGTG+AGG | 0.431925 | 3.1:+3488279 | None:intergenic |
| ACAAAACATAGAACAGAAAC+AGG | 0.434714 | 3.1:+3488773 | None:intergenic |
| ATCGAACGAAGGAGAGTTCA+TGG | 0.434993 | 3.1:-3493709 | MS.gene009396:CDS |
| TGCTAAGCTACAGAGGATAT+TGG | 0.435547 | 3.1:-3488064 | MS.gene009396:CDS |
| CGCGGAAAACGGCACCGCTC+CGG | 0.438216 | 3.1:-3493905 | MS.gene009396:CDS |
| CTTTGCGCTTCATGAAATTG+AGG | 0.443193 | 3.1:+3490863 | None:intergenic |
| CATCTCAAAGCGGCTGGCAG+AGG | 0.448744 | 3.1:-3487591 | MS.gene009396:CDS |
| CTCTGCCAGCCGCTTTGAGA+TGG | 0.450706 | 3.1:+3487592 | None:intergenic |
| AGCCTTTCCTTTGGTAAGGT+GGG | 0.455889 | 3.1:+3488270 | None:intergenic |
| GCCTAGAACTGATTCAATAC+AGG | 0.461707 | 3.1:-3487659 | MS.gene009396:CDS |
| TATGTCTGAAAACAGGTTGA+TGG | 0.461817 | 3.1:-3488880 | MS.gene009396:intron |
| TAGCCTTTCCTTTGGTAAGG+TGG | 0.462887 | 3.1:+3488269 | None:intergenic |
| AAACAGTCATTGTATTCTGA+TGG | 0.463429 | 3.1:+3490910 | None:intergenic |
| CTCAAAGCGGCTGGCAGAGG+GGG | 0.465660 | 3.1:-3487588 | MS.gene009396:CDS |
| TGGTACATTGTCAATGTTTG+AGG | 0.468141 | 3.1:-3489538 | MS.gene009396:intron |
| CGCGCGTGATGTGCCGTTGG+AGG | 0.469935 | 3.1:-3493759 | MS.gene009396:CDS |
| ATCTCAAAGCGGCTGGCAGA+GGG | 0.470129 | 3.1:-3487590 | MS.gene009396:CDS |
| TAGCAGTCCAAGGTCTGAAA+GGG | 0.474333 | 3.1:+3488082 | None:intergenic |
| TAACGGTGATTTGCCGTGAC+CGG | 0.475273 | 3.1:+3493879 | None:intergenic |
| GCCGTGACCGGCGGCCGGAG+CGG | 0.475980 | 3.1:+3493891 | None:intergenic |
| TAAGGGAAACATTTCTATCA+AGG | 0.476254 | 3.1:-3488009 | MS.gene009396:intron |
| GAGGATACATGCCAAATTGT+AGG | 0.479474 | 3.1:+3488298 | None:intergenic |
| GAAAGGCCCCTTTCAGACCT+TGG | 0.481558 | 3.1:-3488089 | MS.gene009396:CDS |
| GCACCAATCAGCGCGGAAAA+CGG | 0.482626 | 3.1:-3493916 | MS.gene009396:CDS |
| CTTTCCTTTGGTAAGGTGGG+AGG | 0.482746 | 3.1:+3488273 | None:intergenic |
| AATATAGCTACTATTGAACT+TGG | 0.484396 | 3.1:-3490970 | MS.gene009396:CDS |
| TTTCCTTTGGTAAGGTGGGA+GGG | 0.485022 | 3.1:+3488274 | None:intergenic |
| GAGATCTTCTGTGCTTCCGT+TGG | 0.489681 | 3.1:-3493791 | MS.gene009396:CDS |
| AACGGCACCGCTCCGGCCGC+CGG | 0.498845 | 3.1:-3493898 | MS.gene009396:CDS |
| CTTGTGATCAAGAAATAACT+TGG | 0.501570 | 3.1:+3488816 | None:intergenic |
| GGCAGTTGTTGATGAGAAAG+TGG | 0.502028 | 3.1:-3492332 | MS.gene009396:CDS |
| TCGAAGAAGGAGGGAAAAGT+TGG | 0.503931 | 3.1:-3488119 | MS.gene009396:CDS |
| CGGAGGGCGCATGCCGCCAT+CGG | 0.503974 | 3.1:+3493855 | None:intergenic |
| CGAAGGAGAGTTCATGGATG+TGG | 0.504143 | 3.1:-3493703 | MS.gene009396:CDS |
| ACATAATACTCATAATCGTT+AGG | 0.515470 | 3.1:+3493679 | None:intergenic |
| TAGCAGCATCAAGCTCTTCG+TGG | 0.517803 | 3.1:+3491028 | None:intergenic |
| GATTTGCCGTGACCGGCGGC+CGG | 0.521552 | 3.1:+3493886 | None:intergenic |
| CAATAGGAGGCTTGATGAGT+GGG | 0.526847 | 3.1:-3492389 | MS.gene009396:CDS |
| GGTACCGAATCTGACGGCGG+AGG | 0.528098 | 3.1:+3493838 | None:intergenic |
| GCGCGTGATGTGCCGTTGGA+GGG | 0.530602 | 3.1:-3493758 | MS.gene009396:CDS |
| AGCATATGAACTTTCGAAGA+AGG | 0.533468 | 3.1:-3488132 | MS.gene009396:CDS |
| TGATGAGAAAGTGGAAGAGA+AGG | 0.537014 | 3.1:-3492323 | MS.gene009396:intron |
| CTTCTGTATATCTCATCACC+AGG | 0.541478 | 3.1:+3489561 | None:intergenic |
| CGCTTCACCAATTCGTACTC+CGG | 0.542801 | 3.1:+3493817 | None:intergenic |
| AGAGCAGCTTCAGAGGCATA+TGG | 0.542808 | 3.1:-3490842 | MS.gene009396:intron |
| GCTACAGAGGATATTGGACC+AGG | 0.545227 | 3.1:-3488058 | MS.gene009396:CDS |
| TTAGCAGTCCAAGGTCTGAA+AGG | 0.547238 | 3.1:+3488081 | None:intergenic |
| CCTTACCAAAGGAAAGGCTA+TGG | 0.547648 | 3.1:-3488266 | MS.gene009396:CDS |
| GATCGCCATCTCAAAGCGGC+TGG | 0.549312 | 3.1:-3487597 | MS.gene009396:CDS |
| TTGTGTGAATGTGATGAAAG+AGG | 0.553539 | 3.1:-3488754 | MS.gene009396:CDS |
| CTCTGTAGCTTAGCAGTCCA+AGG | 0.556626 | 3.1:+3488072 | None:intergenic |
| AGATGACACGCCACCAGAAG+AGG | 0.561058 | 3.1:-3491514 | MS.gene009396:CDS |
| CCAGCTTGATCTGGAATCTG+TGG | 0.561253 | 3.1:-3492356 | MS.gene009396:CDS |
| CGGTGATTTGCCGTGACCGG+CGG | 0.564092 | 3.1:+3493882 | None:intergenic |
| TCCGCCGTCAGATTCGGTAC+CGG | 0.569901 | 3.1:-3493836 | MS.gene009396:CDS |
| AGCGCAAAGAGCAGCTTCAG+AGG | 0.577676 | 3.1:-3490849 | MS.gene009396:CDS |
| GTGATGTGCCGTTGGAGGGA+TGG | 0.583575 | 3.1:-3493754 | MS.gene009396:CDS |
| GAAAAGTTGGTACACCTGAA+AGG | 0.588501 | 3.1:-3488106 | MS.gene009396:CDS |
| GAAAGAGGATGCCACATGGT+TGG | 0.592800 | 3.1:-3488739 | MS.gene009396:CDS |
| ACGCGCGTCCCAACCTCCAA+CGG | 0.594515 | 3.1:+3493775 | None:intergenic |
| TCAATAGGAGGCTTGATGAG+TGG | 0.598163 | 3.1:-3492390 | MS.gene009396:CDS |
| CATCGATCTTCCTCTTCTGG+TGG | 0.599237 | 3.1:+3491504 | None:intergenic |
| CTCCCACCTTACCAAAGGAA+AGG | 0.601922 | 3.1:-3488272 | MS.gene009396:CDS |
| GGACGCGCGTGATGTGCCGT+TGG | 0.602198 | 3.1:-3493762 | MS.gene009396:CDS |
| GTACCGAATCTGACGGCGGA+GGG | 0.606344 | 3.1:+3493839 | None:intergenic |
| CAGAATGTCTAAAAGAACCC+TGG | 0.606443 | 3.1:+3488040 | None:intergenic |
| ACAGGTCAACATCATAGTAG+AGG | 0.608876 | 3.1:+3488791 | None:intergenic |
| ATATGAACTTTCGAAGAAGG+AGG | 0.609381 | 3.1:-3488129 | MS.gene009396:CDS |
| GGTTGATGGCAAGAAGAACA+AGG | 0.611054 | 3.1:-3488866 | MS.gene009396:CDS |
| TATGAACTTTCGAAGAAGGA+GGG | 0.614244 | 3.1:-3488128 | MS.gene009396:CDS |
| GAACTGATTCAATACAGGAA+AGG | 0.617862 | 3.1:-3487654 | MS.gene009396:CDS |
| CTTGGACTGCTAAGCTACAG+AGG | 0.618666 | 3.1:-3488071 | MS.gene009396:CDS |
| GATACTTTCCATCCCTCCAA+CGG | 0.620693 | 3.1:+3493746 | None:intergenic |
| GCTTGATCTGGAATCTGTGG+AGG | 0.620847 | 3.1:-3492353 | MS.gene009396:CDS |
| CCACAGATTCCAGATCAAGC+TGG | 0.624499 | 3.1:+3492356 | None:intergenic |
| TCTCAAAGCGGCTGGCAGAG+GGG | 0.626973 | 3.1:-3487589 | MS.gene009396:CDS |
| GATCGATGAGACACATGTTG+AGG | 0.627249 | 3.1:-3491489 | MS.gene009396:intron |
| TTCTGTATATCTCATCACCA+GGG | 0.627558 | 3.1:+3489562 | None:intergenic |
| CAGGTCAACATCATAGTAGA+GGG | 0.630927 | 3.1:+3488792 | None:intergenic |
| GGCAAATCACCGTTAACCGA+TGG | 0.632584 | 3.1:-3493871 | MS.gene009396:CDS |
| TGCTAGTTTACGAGAACATG+AGG | 0.636420 | 3.1:-3491010 | MS.gene009396:CDS |
| AAATCACCGTTAACCGATGG+CGG | 0.636790 | 3.1:-3493868 | MS.gene009396:CDS |
| TCACCCTCCCACCTTACCAA+AGG | 0.640713 | 3.1:-3488277 | MS.gene009396:CDS |
| ATTGTATTCTGATGGAAATG+GGG | 0.647441 | 3.1:+3490918 | None:intergenic |
| AGTACGAATTGGTGAAGCGA+CGG | 0.649004 | 3.1:-3493813 | MS.gene009396:CDS |
| TACTCCGGTACCGAATCTGA+CGG | 0.663083 | 3.1:+3493832 | None:intergenic |
| GGTGATGAGATATACAGAAG+TGG | 0.664409 | 3.1:-3489558 | MS.gene009396:CDS |
| CTGTCAAAGTCATCGAACGA+AGG | 0.668378 | 3.1:-3493720 | MS.gene009396:CDS |
| AGGACAGCATGTCATTTGTG+CGG | 0.673789 | 3.1:-3487634 | MS.gene009396:CDS |
| GAAGATATGAGATCGAGACA+TGG | 0.675108 | 3.1:-3490948 | MS.gene009396:CDS |
| AGCAGTCCAAGGTCTGAAAG+GGG | 0.678912 | 3.1:+3488083 | None:intergenic |
| TCTGTATATCTCATCACCAG+GGG | 0.682304 | 3.1:+3489563 | None:intergenic |
| CTACAGAGGATATTGGACCA+GGG | 0.692391 | 3.1:-3488057 | MS.gene009396:CDS |
| TCCGGTACCGAATCTGACGG+CGG | 0.699572 | 3.1:+3493835 | None:intergenic |
| TTTGGATCGCCATCTCAAAG+CGG | 0.719564 | 3.1:-3487601 | MS.gene009396:CDS |
| CTGTATATCTCATCACCAGG+GGG | 0.726804 | 3.1:+3489564 | None:intergenic |
| TGATGAAAGAGGATGCCACA+TGG | 0.748395 | 3.1:-3488743 | MS.gene009396:CDS |
| GCTCGACGCACCAATCAGCG+CGG | 0.754918 | 3.1:-3493923 | MS.gene009396:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAATATTTTACTTG+CGG | - | chr3.1:3493606-3493625 | MS.gene009396:intron | 10.0% |
| !!! | TTTTTTTGATCTTTTTTTTT+TGG | - | chr3.1:3489048-3489067 | MS.gene009396:intron | 10.0% |
| !! | AAAAAAAACTTGAATTATTG+TGG | + | chr3.1:3489596-3489615 | None:intergenic | 15.0% |
| !! | AAAAATTACAAATATCTAAC+AGG | + | chr3.1:3492795-3492814 | None:intergenic | 15.0% |
| !! | AAAAGTAATCAATATCAATA+AGG | + | chr3.1:3493116-3493135 | None:intergenic | 15.0% |
| !! | AAAATTACAAATATCTAACA+GGG | + | chr3.1:3492794-3492813 | None:intergenic | 15.0% |
| !! | AACATATCAATATCAATATA+TGG | - | chr3.1:3488910-3488929 | MS.gene009396:intron | 15.0% |
| !! | AATATGAAAGTTTATGTATT+AGG | - | chr3.1:3493673-3493692 | MS.gene009396:CDS | 15.0% |
| !! | AATTATATAATAACAAACCT+AGG | - | chr3.1:3490017-3490036 | MS.gene009396:intron | 15.0% |
| !! | AATTGTGATATTATTTAGTT+GGG | - | chr3.1:3490286-3490305 | MS.gene009396:intron | 15.0% |
| !! | ACTTCAATTTAATGAAATTT+AGG | - | chr3.1:3487858-3487877 | MS.gene009396:intron | 15.0% |
| !! | AGTTTAAGTAAAATTCATAA+TGG | - | chr3.1:3493294-3493313 | MS.gene009396:intron | 15.0% |
| !! | ATATAAATATTCTTTCTACT+GGG | - | chr3.1:3492278-3492297 | MS.gene009396:intron | 15.0% |
| !! | ATATAATAACTCAATCATAT+AGG | + | chr3.1:3491485-3491504 | None:intergenic | 15.0% |
| !! | ATTAAAAAAAAATGTGGAAT+TGG | + | chr3.1:3488807-3488826 | None:intergenic | 15.0% |
| !! | CTTCAATTTAATGAAATTTA+GGG | - | chr3.1:3487859-3487878 | MS.gene009396:intron | 15.0% |
| !! | TAATTGTGATATTATTTAGT+TGG | - | chr3.1:3490285-3490304 | MS.gene009396:intron | 15.0% |
| !! | TATAATAACTCAATCATATA+GGG | + | chr3.1:3491484-3491503 | None:intergenic | 15.0% |
| !! | TGTTATTATTATAAACACTA+AGG | - | chr3.1:3491375-3491394 | MS.gene009396:intron | 15.0% |
| !! | TTAACTATTGAAAAAGTTTA+GGG | + | chr3.1:3488518-3488537 | None:intergenic | 15.0% |
| !!! | AAATAAATGTTTTTAACTTG+AGG | - | chr3.1:3490153-3490172 | MS.gene009396:intron | 15.0% |
| !!! | AAGATATTTTTTAGTCTTTT+AGG | + | chr3.1:3491790-3491809 | None:intergenic | 15.0% |
| !!! | AGATATTTTTTAGTCTTTTA+GGG | + | chr3.1:3491789-3491808 | None:intergenic | 15.0% |
| !!! | ATTTTTAATATTTTACTTGC+GGG | - | chr3.1:3493607-3493626 | MS.gene009396:intron | 15.0% |
| !!! | TAATCAAATTCATTATTTTC+TGG | - | chr3.1:3491676-3491695 | MS.gene009396:intron | 15.0% |
| !!! | TTATTTGAAAATGAACTTTT+CGG | - | chr3.1:3491652-3491671 | MS.gene009396:intron | 15.0% |
| !!! | TTGACAAATTTTAAAGAAAA+TGG | + | chr3.1:3493491-3493510 | None:intergenic | 15.0% |
| !!! | TTTTCTTTAAAATTTGTCAA+TGG | - | chr3.1:3493491-3493510 | MS.gene009396:intron | 15.0% |
| !! | AAAAACATCTTTCAATACTT+AGG | + | chr3.1:3492431-3492450 | None:intergenic | 20.0% |
| !! | AAAATATCCAAAACATTAAG+AGG | - | chr3.1:3491097-3491116 | MS.gene009396:intron | 20.0% |
| !! | AAAATGAAACAGATAATGAA+AGG | + | chr3.1:3489567-3489586 | None:intergenic | 20.0% |
| !! | AACTTTCAATGAATGAAATT+AGG | - | chr3.1:3488050-3488069 | MS.gene009396:CDS | 20.0% |
| !! | ACTGTTAAAAATGATGTAAT+CGG | - | chr3.1:3488309-3488328 | MS.gene009396:CDS | 20.0% |
| !! | ATCTCCAAAATTAAACATAA+TGG | + | chr3.1:3492039-3492058 | None:intergenic | 20.0% |
| !! | ATGAACAAAGAATGAAAATT+AGG | + | chr3.1:3487832-3487851 | None:intergenic | 20.0% |
| !! | ATTGTGATATTATTTAGTTG+GGG | - | chr3.1:3490287-3490306 | MS.gene009396:intron | 20.0% |
| !! | CATATAAATATTCTTTCTAC+TGG | - | chr3.1:3492277-3492296 | MS.gene009396:intron | 20.0% |
| !! | CATTGTATTAAAATGAAGAA+CGG | + | chr3.1:3489747-3489766 | None:intergenic | 20.0% |
| !! | CTTAACTATTGAAAAAGTTT+AGG | + | chr3.1:3488519-3488538 | None:intergenic | 20.0% |
| !! | GGCTAAAATTATATATTGAT+GGG | - | chr3.1:3489698-3489717 | MS.gene009396:intron | 20.0% |
| !! | TAAAGATATACTTAGTTTCA+TGG | + | chr3.1:3489272-3489291 | None:intergenic | 20.0% |
| !! | TCATTATTTGTTTGACATTA+TGG | - | chr3.1:3493086-3493105 | MS.gene009396:intron | 20.0% |
| !! | TTCAATTTCCATAATTCTAT+TGG | - | chr3.1:3493046-3493065 | MS.gene009396:intron | 20.0% |
| !! | TTCATAAAACATAAAAGAGT+AGG | - | chr3.1:3489331-3489350 | MS.gene009396:intron | 20.0% |
| !!! | AAAAATACAGTCTAAAGTAA+AGG | + | chr3.1:3489198-3489217 | None:intergenic | 20.0% |
| !!! | AAATTAAACATAATGGAAGA+CGG | + | chr3.1:3492032-3492051 | None:intergenic | 20.0% |
| !!! | AATTTTAAAGAAAATGGAAG+AGG | + | chr3.1:3493485-3493504 | None:intergenic | 20.0% |
| !!! | AATTTTGTAGTTTTGAGAAT+TGG | - | chr3.1:3488088-3488107 | MS.gene009396:CDS | 20.0% |
| !!! | ATTGTTTAATTTAATACACG+AGG | + | chr3.1:3492096-3492115 | None:intergenic | 20.0% |
| !!! | ATTTAGGGTTTTCAATTTTT+AGG | - | chr3.1:3487874-3487893 | MS.gene009396:intron | 20.0% |
| !!! | CTAAACTTTTTCAATAGTTA+AGG | - | chr3.1:3488517-3488536 | MS.gene009396:intron | 20.0% |
| !!! | GTATTTTGTTTCAAAGAAAT+GGG | - | chr3.1:3491055-3491074 | MS.gene009396:intron | 20.0% |
| !!! | GTTTTTTTTATGAGTTTCAA+GGG | - | chr3.1:3488190-3488209 | MS.gene009396:intron | 20.0% |
| !!! | TCTTCCATTATGTTTAATTT+TGG | - | chr3.1:3492032-3492051 | MS.gene009396:intron | 20.0% |
| !!! | TGATTACTTTTTTATCGTAA+AGG | - | chr3.1:3493125-3493144 | MS.gene009396:intron | 20.0% |
| !!! | TGTTTTTTTTATGAGTTTCA+AGG | - | chr3.1:3488189-3488208 | MS.gene009396:intron | 20.0% |
| !!! | TTTAGGGTTTTCAATTTTTA+GGG | - | chr3.1:3487875-3487894 | MS.gene009396:intron | 20.0% |
| !!! | TTTCAGAATACTTGTTTTAT+GGG | - | chr3.1:3489676-3489695 | MS.gene009396:intron | 20.0% |
| !!! | TTTTTAATATTTTACTTGCG+GGG | - | chr3.1:3493608-3493627 | MS.gene009396:intron | 20.0% |
| !!! | TTTTTTTTATGAGTTTCAAG+GGG | - | chr3.1:3488191-3488210 | MS.gene009396:intron | 20.0% |
| ! | AAAAAACTAAAGCTAAAGCA+TGG | + | chr3.1:3491192-3491211 | None:intergenic | 25.0% |
| ! | AAAAACTAAAGCTAAAGCAT+GGG | + | chr3.1:3491191-3491210 | None:intergenic | 25.0% |
| ! | AAAACTTCAAGTATGAAAAC+AGG | + | chr3.1:3490235-3490254 | None:intergenic | 25.0% |
| ! | AACTGCAGTAAAATTGATAA+TGG | + | chr3.1:3491447-3491466 | None:intergenic | 25.0% |
| ! | AATATAGCTACTATTGAACT+TGG | - | chr3.1:3490494-3490513 | MS.gene009396:intron | 25.0% |
| ! | AATGAAATTAACATGACTGA+TGG | - | chr3.1:3488233-3488252 | MS.gene009396:intron | 25.0% |
| ! | ACATAATACTCATAATCGTT+AGG | + | chr3.1:3487788-3487807 | None:intergenic | 25.0% |
| ! | ATACAAAAAGAACAGTTCAA+TGG | + | chr3.1:3492843-3492862 | None:intergenic | 25.0% |
| ! | ATCAGTGCCTAATATATATT+GGG | - | chr3.1:3488704-3488723 | MS.gene009396:intron | 25.0% |
| ! | ATGAAATTAACATGACTGAT+GGG | - | chr3.1:3488234-3488253 | MS.gene009396:intron | 25.0% |
| ! | ATGTAAATCATCTTCAAACA+AGG | + | chr3.1:3490726-3490745 | None:intergenic | 25.0% |
| ! | ATTACTATATGTCTGAAAAC+AGG | - | chr3.1:3492577-3492596 | MS.gene009396:intron | 25.0% |
| ! | CATGTAGGAAAAAAACTTAA+AGG | + | chr3.1:3490089-3490108 | None:intergenic | 25.0% |
| ! | CTCTATCATCATATTTACTT+TGG | - | chr3.1:3492216-3492235 | MS.gene009396:intron | 25.0% |
| ! | CTTGTTTATTGATGAAGTAA+TGG | - | chr3.1:3492128-3492147 | MS.gene009396:intron | 25.0% |
| ! | GAATGAAATTAGGATTGTTT+GGG | - | chr3.1:3488060-3488079 | MS.gene009396:CDS | 25.0% |
| ! | GGGCTAAAATTATATATTGA+TGG | - | chr3.1:3489697-3489716 | MS.gene009396:intron | 25.0% |
| ! | GTCATATGACATTAAAACTT+TGG | - | chr3.1:3489648-3489667 | MS.gene009396:intron | 25.0% |
| ! | TACAAAAAGAACAGTTCAAT+GGG | + | chr3.1:3492842-3492861 | None:intergenic | 25.0% |
| ! | TACTGTAACCAATAGAATTA+TGG | + | chr3.1:3493057-3493076 | None:intergenic | 25.0% |
| ! | TAGGTTTCCCAATATATATT+AGG | + | chr3.1:3488714-3488733 | None:intergenic | 25.0% |
| ! | TATCAGTGCCTAATATATAT+TGG | - | chr3.1:3488703-3488722 | MS.gene009396:intron | 25.0% |
| ! | TGAATGAAATTAGGATTGTT+TGG | - | chr3.1:3488059-3488078 | MS.gene009396:CDS | 25.0% |
| ! | TGAGGAAAAACAAAAGATAA+GGG | + | chr3.1:3490782-3490801 | None:intergenic | 25.0% |
| ! | TGTAAGTTATCCTGAAAAAT+AGG | - | chr3.1:3493240-3493259 | MS.gene009396:intron | 25.0% |
| ! | TTAATTTCATTTCTGTTTCG+TGG | + | chr3.1:3488224-3488243 | None:intergenic | 25.0% |
| ! | TTACATTTGATTGATGTCTT+TGG | - | chr3.1:3490740-3490759 | MS.gene009396:intron | 25.0% |
| ! | TTATATGTATATGTGTGTGT+GGG | + | chr3.1:3492264-3492283 | None:intergenic | 25.0% |
| ! | TTGATGTTAGCAAATTGATT+TGG | - | chr3.1:3493907-3493926 | MS.gene009396:CDS | 25.0% |
| ! | TTTATATGTATATGTGTGTG+TGG | + | chr3.1:3492265-3492284 | None:intergenic | 25.0% |
| !! | AAAACTACCTCTTAATGTTT+TGG | + | chr3.1:3491107-3491126 | None:intergenic | 25.0% |
| !! | CAATATATCTTCAGCTTTAA+TGG | + | chr3.1:3493772-3493791 | None:intergenic | 25.0% |
| !! | CATTTTGCAGTTTTTCTAAT+TGG | - | chr3.1:3490804-3490823 | MS.gene009396:intron | 25.0% |
| !! | CTAAAAGATGCTAATTGTTT+TGG | - | chr3.1:3489022-3489041 | MS.gene009396:intron | 25.0% |
| !! | TAATTGAATAACTTGTCAGT+TGG | - | chr3.1:3490202-3490221 | MS.gene009396:intron | 25.0% |
| !! | TATTGAAAAAGTTTAGGGTT+GGG | + | chr3.1:3488513-3488532 | None:intergenic | 25.0% |
| !! | TGGTTCTATTATCTTACTTT+AGG | - | chr3.1:3490961-3490980 | MS.gene009396:CDS | 25.0% |
| !!! | AAAACAAGTATTCTGAAACT+TGG | + | chr3.1:3489674-3489693 | None:intergenic | 25.0% |
| !!! | ATGTTTATTTGCTGTATGTA+GGG | - | chr3.1:3488996-3489015 | MS.gene009396:intron | 25.0% |
| !!! | ATTTCCACTGTTGATTTTAT+AGG | - | chr3.1:3490412-3490431 | MS.gene009396:intron | 25.0% |
| !!! | ATTTTTTAGTCTTTTAGGGA+GGG | + | chr3.1:3491785-3491804 | None:intergenic | 25.0% |
| !!! | GGTATTTTGTTTCAAAGAAA+TGG | - | chr3.1:3491054-3491073 | MS.gene009396:intron | 25.0% |
| !!! | GTAAAGTTCATTTGAGATTT+TGG | - | chr3.1:3493539-3493558 | MS.gene009396:intron | 25.0% |
| !!! | GTTTCAGAATACTTGTTTTA+TGG | - | chr3.1:3489675-3489694 | MS.gene009396:intron | 25.0% |
| !!! | GTTTTCAATTTTTAGGGTTA+GGG | - | chr3.1:3487881-3487900 | MS.gene009396:intron | 25.0% |
| !!! | TATGTTTATTTGCTGTATGT+AGG | - | chr3.1:3488995-3489014 | MS.gene009396:intron | 25.0% |
| !!! | TATTTAGGAGTGTTTACTTT+AGG | - | chr3.1:3492923-3492942 | MS.gene009396:intron | 25.0% |
| !!! | TATTTTTTAGTCTTTTAGGG+AGG | + | chr3.1:3491786-3491805 | None:intergenic | 25.0% |
| !!! | TTCAGAATACTTGTTTTATG+GGG | - | chr3.1:3489677-3489696 | MS.gene009396:intron | 25.0% |
| !!! | TTGTTTTGAGTCATTAATGA+TGG | - | chr3.1:3492982-3493001 | MS.gene009396:intron | 25.0% |
| !!! | TTTCCACTGTTGATTTTATA+GGG | - | chr3.1:3490413-3490432 | MS.gene009396:intron | 25.0% |
| !!! | TTTTTAGTGAAATGAGTTTC+AGG | - | chr3.1:3492446-3492465 | MS.gene009396:intron | 25.0% |
| !!! | TTTTTTTTTTGGCAGTCAAT+AGG | - | chr3.1:3489059-3489078 | MS.gene009396:intron | 25.0% |
| AAACAAAATACCAGATTCTG+TGG | + | chr3.1:3491046-3491065 | None:intergenic | 30.0% | |
| AAACAGTCATTGTATTCTGA+TGG | + | chr3.1:3490557-3490576 | None:intergenic | 30.0% | |
| AACAAAATACCAGATTCTGT+GGG | + | chr3.1:3491045-3491064 | None:intergenic | 30.0% | |
| AACACTTGGAGTTAATAGAA+GGG | - | chr3.1:3491699-3491718 | MS.gene009396:intron | 30.0% | |
| AAGACTCAGCCATTTAAATT+TGG | + | chr3.1:3492401-3492420 | None:intergenic | 30.0% | |
| AAGTAACCAGATATATTGGA+AGG | + | chr3.1:3488973-3488992 | None:intergenic | 30.0% | |
| AAGTATAGAAAACTGCAACA+TGG | + | chr3.1:3491584-3491603 | None:intergenic | 30.0% | |
| AATACAGTACAGTTTGAGAA+AGG | + | chr3.1:3490372-3490391 | None:intergenic | 30.0% | |
| AATCGTTATATGCAATACCA+AGG | + | chr3.1:3491252-3491271 | None:intergenic | 30.0% | |
| ACAAAACATAGAACAGAAAC+AGG | + | chr3.1:3492694-3492713 | None:intergenic | 30.0% | |
| AGCCATTTAAATTTGGAAGA+CGG | + | chr3.1:3492394-3492413 | None:intergenic | 30.0% | |
| ATCGTTATATGCAATACCAA+GGG | + | chr3.1:3491251-3491270 | None:intergenic | 30.0% | |
| ATTGTATTCTGATGGAAATG+GGG | + | chr3.1:3490549-3490568 | None:intergenic | 30.0% | |
| CACCAATAATGTCATTCAAA+AGG | + | chr3.1:3491753-3491772 | None:intergenic | 30.0% | |
| CATTGTATTCTGATGGAAAT+GGG | + | chr3.1:3490550-3490569 | None:intergenic | 30.0% | |
| CTGAGGAAAAACAAAAGATA+AGG | + | chr3.1:3490783-3490802 | None:intergenic | 30.0% | |
| CTTGTGATCAAGAAATAACT+TGG | + | chr3.1:3492651-3492670 | None:intergenic | 30.0% | |
| GTAATCTTTAGGTACTTTCA+GGG | - | chr3.1:3488459-3488478 | MS.gene009396:intron | 30.0% | |
| GTATTGCATATAACGATTGT+GGG | - | chr3.1:3491254-3491273 | MS.gene009396:intron | 30.0% | |
| GTGTTTGGATATCTAATGAT+GGG | + | chr3.1:3491165-3491184 | None:intergenic | 30.0% | |
| GTTGTTAACTTAGACTTTGA+TGG | + | chr3.1:3488268-3488287 | None:intergenic | 30.0% | |
| TAAATATTCTTTCTACTGGG+AGG | - | chr3.1:3492281-3492300 | MS.gene009396:intron | 30.0% | |
| TAACTCAAACAAACATGAAG+AGG | + | chr3.1:3493266-3493285 | None:intergenic | 30.0% | |
| TAAGGGAAACATTTCTATCA+AGG | - | chr3.1:3493455-3493474 | MS.gene009396:intron | 30.0% | |
| TAGCAAGTAACCAGATATAT+TGG | + | chr3.1:3488977-3488996 | None:intergenic | 30.0% | |
| TAGTAATACAGCATGATAAC+TGG | + | chr3.1:3492893-3492912 | None:intergenic | 30.0% | |
| TATATATTGGGAAACCTAAC+TGG | - | chr3.1:3488716-3488735 | MS.gene009396:intron | 30.0% | |
| TCAAAATAAAGGGATGTGAA+GGG | + | chr3.1:3490677-3490696 | None:intergenic | 30.0% | |
| TCATTGTATTCTGATGGAAA+TGG | + | chr3.1:3490551-3490570 | None:intergenic | 30.0% | |
| TCTAAGTTAACAACATCCAA+AGG | - | chr3.1:3488274-3488293 | MS.gene009396:CDS | 30.0% | |
| TGTGTTTGGATATCTAATGA+TGG | + | chr3.1:3491166-3491185 | None:intergenic | 30.0% | |
| TTCAAAATAAAGGGATGTGA+AGG | + | chr3.1:3490678-3490697 | None:intergenic | 30.0% | |
| TTCATAATGGTGTGAAACAT+TGG | - | chr3.1:3493307-3493326 | MS.gene009396:intron | 30.0% | |
| ! | AAAACGCACTTTAGATTTTC+CGG | - | chr3.1:3489499-3489518 | MS.gene009396:intron | 30.0% |
| ! | AGACATTCTGAAAAAGCATA+AGG | - | chr3.1:3493437-3493456 | MS.gene009396:intron | 30.0% |
| ! | CTATTGAAAAAGTTTAGGGT+TGG | + | chr3.1:3488514-3488533 | None:intergenic | 30.0% |
| ! | CTTTCTTTTTGTCAATGCTA+TGG | - | chr3.1:3493704-3493723 | MS.gene009396:CDS | 30.0% |
| ! | GACATTCTGAAAAAGCATAA+GGG | - | chr3.1:3493438-3493457 | MS.gene009396:intron | 30.0% |
| ! | GTTATTGGGATTTTCTTATG+TGG | - | chr3.1:3488645-3488664 | MS.gene009396:intron | 30.0% |
| ! | TGAACAAGGTTTTCTTTCTA+AGG | + | chr3.1:3489247-3489266 | None:intergenic | 30.0% |
| ! | TTAGTTTCATGGATTGAACA+AGG | + | chr3.1:3489261-3489280 | None:intergenic | 30.0% |
| !! | AAACAGTATGAGCTTGTTAT+TGG | - | chr3.1:3488630-3488649 | MS.gene009396:intron | 30.0% |
| !! | AACAGTATGAGCTTGTTATT+GGG | - | chr3.1:3488631-3488650 | MS.gene009396:intron | 30.0% |
| !! | GAAAATCTAAAGTGCGTTTT+TGG | + | chr3.1:3489499-3489518 | None:intergenic | 30.0% |
| !!! | AATTGAAGGTTTTGTTTTGC+AGG | - | chr3.1:3493728-3493747 | MS.gene009396:CDS | 30.0% |
| !!! | ACAGCCACTTTTCAAAATAA+AGG | + | chr3.1:3490688-3490707 | None:intergenic | 30.0% |
| !!! | CACATTTTTTCTGCATAAAC+AGG | + | chr3.1:3491869-3491888 | None:intergenic | 30.0% |
| !!! | CAGCCACTTTTCAAAATAAA+GGG | + | chr3.1:3490687-3490706 | None:intergenic | 30.0% |
| !!! | CATCCCTTTATTTTGAAAAG+TGG | - | chr3.1:3490681-3490700 | MS.gene009396:intron | 30.0% |
| !!! | GGTTTTCAATTTTTAGGGTT+AGG | - | chr3.1:3487880-3487899 | MS.gene009396:intron | 30.0% |
| !!! | GTGTTTGATTTTGAGTTTTG+TGG | - | chr3.1:3487929-3487948 | MS.gene009396:intron | 30.0% |
| !!! | TCATTATTTTCTGGAACACT+TGG | - | chr3.1:3491685-3491704 | MS.gene009396:intron | 30.0% |
| !!! | TCTAACCTTTTTGAGTCATT+GGG | - | chr3.1:3488486-3488505 | MS.gene009396:intron | 30.0% |
| !!! | TGTGATGTATGTGGTTTTTT+AGG | - | chr3.1:3492319-3492338 | MS.gene009396:intron | 30.0% |
| !!! | TTTTTTCTGCATAAACAGGT+AGG | + | chr3.1:3491865-3491884 | None:intergenic | 30.0% |
| AAAATAAAGGGATGTGAAGG+GGG | + | chr3.1:3490675-3490694 | None:intergenic | 35.0% | |
| AACTGAGTGTTCTCAAAACT+CGG | + | chr3.1:3492484-3492503 | None:intergenic | 35.0% | |
| ACAACATCCAAAGGAAAAGA+AGG | - | chr3.1:3488283-3488302 | MS.gene009396:CDS | 35.0% | |
| ACATAAAAGAGTAGGTGTCT+TGG | - | chr3.1:3489339-3489358 | MS.gene009396:intron | 35.0% | |
| ACATTGAACCAACATAGTGT+TGG | - | chr3.1:3488853-3488872 | MS.gene009396:CDS | 35.0% | |
| ACCCGTCTTCCAAATTTAAA+TGG | - | chr3.1:3492389-3492408 | MS.gene009396:CDS | 35.0% | |
| AGCATATGAACTTTCGAAGA+AGG | - | chr3.1:3493332-3493351 | MS.gene009396:intron | 35.0% | |
| ATATGAACTTTCGAAGAAGG+AGG | - | chr3.1:3493335-3493354 | MS.gene009396:intron | 35.0% | |
| CAAAATAAAGGGATGTGAAG+GGG | + | chr3.1:3490676-3490695 | None:intergenic | 35.0% | |
| CAACAAAATATGAGCATGAC+AGG | + | chr3.1:3491516-3491535 | None:intergenic | 35.0% | |
| CAGATATATTGGAAGGAGTT+AGG | + | chr3.1:3488966-3488985 | None:intergenic | 35.0% | |
| CGTAAAGGAAAAACATTCTG+AGG | - | chr3.1:3493140-3493159 | MS.gene009396:intron | 35.0% | |
| CGTAATCTTTAGGTACTTTC+AGG | - | chr3.1:3488458-3488477 | MS.gene009396:intron | 35.0% | |
| CTAACTCCTTCCAATATATC+TGG | - | chr3.1:3488964-3488983 | MS.gene009396:intron | 35.0% | |
| GAAAAACTGCAAAATGTCTG+AGG | + | chr3.1:3490800-3490819 | None:intergenic | 35.0% | |
| GAACACTTGGAGTTAATAGA+AGG | - | chr3.1:3491698-3491717 | MS.gene009396:intron | 35.0% | |
| GACTAGTGAGTCATATGAAA+TGG | - | chr3.1:3491727-3491746 | MS.gene009396:intron | 35.0% | |
| GCAAGAAGAACAAGGTTTAT+GGG | - | chr3.1:3492606-3492625 | MS.gene009396:intron | 35.0% | |
| GCCATTTAAATTTGGAAGAC+GGG | + | chr3.1:3492393-3492412 | None:intergenic | 35.0% | |
| GGTATTGCATATAACGATTG+TGG | - | chr3.1:3491253-3491272 | MS.gene009396:intron | 35.0% | |
| GGTTCATACACTCAGTATAA+TGG | + | chr3.1:3487811-3487830 | None:intergenic | 35.0% | |
| GTCAATGCTATGGTAATTGA+AGG | - | chr3.1:3493714-3493733 | MS.gene009396:CDS | 35.0% | |
| GTGAATTCATGAGTTGCTAA+AGG | + | chr3.1:3489307-3489326 | None:intergenic | 35.0% | |
| TAACAGAACCAACACTATGT+TGG | + | chr3.1:3488864-3488883 | None:intergenic | 35.0% | |
| TAAGGCAGTACACTTGTATA+TGG | - | chr3.1:3491393-3491412 | MS.gene009396:intron | 35.0% | |
| TATGAACTTTCGAAGAAGGA+GGG | - | chr3.1:3493336-3493355 | MS.gene009396:intron | 35.0% | |
| TCAATCATATAGGGACCATA+AGG | + | chr3.1:3491475-3491494 | None:intergenic | 35.0% | |
| TCCTGTATTGAATCAGTTCT+AGG | + | chr3.1:3493809-3493828 | None:intergenic | 35.0% | |
| TCGAAAAATATCCAACCATG+TGG | + | chr3.1:3492739-3492758 | None:intergenic | 35.0% | |
| TCTTTCTACTGTGATGTATG+TGG | - | chr3.1:3492310-3492329 | MS.gene009396:intron | 35.0% | |
| TGAAACAGATAATGAAAGGC+AGG | + | chr3.1:3489563-3489582 | None:intergenic | 35.0% | |
| TGATAAAGTCGAAGGATACA+TGG | + | chr3.1:3488688-3488707 | None:intergenic | 35.0% | |
| TGGTACATTGTCAATGTTTG+AGG | - | chr3.1:3491926-3491945 | MS.gene009396:intron | 35.0% | |
| TTAGGCTATGTTTGCTTTGA+AGG | - | chr3.1:3490979-3490998 | MS.gene009396:CDS | 35.0% | |
| TTATGTGGTAACCATGCTAT+TGG | - | chr3.1:3488660-3488679 | MS.gene009396:intron | 35.0% | |
| TTCTGTATATCTCATCACCA+GGG | + | chr3.1:3491905-3491924 | None:intergenic | 35.0% | |
| TTGTGTGAATGTGATGAAAG+AGG | - | chr3.1:3492710-3492729 | MS.gene009396:intron | 35.0% | |
| TTTGTGGTTTGAGAGTTTGT+TGG | - | chr3.1:3487945-3487964 | MS.gene009396:intron | 35.0% | |
| ! | AAACGCACTTTAGATTTTCC+GGG | - | chr3.1:3489500-3489519 | MS.gene009396:intron | 35.0% |
| ! | ACATTTTACATCCTCGCTTA+TGG | + | chr3.1:3488549-3488568 | None:intergenic | 35.0% |
| ! | AGCTGTACTTGTAATTTTCC+AGG | - | chr3.1:3489833-3489852 | MS.gene009396:intron | 35.0% |
| ! | ATTTTCCATAGCCTTTCCTT+TGG | + | chr3.1:3493206-3493225 | None:intergenic | 35.0% |
| ! | CATTTTACATCCTCGCTTAT+GGG | + | chr3.1:3488548-3488567 | None:intergenic | 35.0% |
| ! | CTGTACTTGTAATTTTCCAG+GGG | - | chr3.1:3489835-3489854 | MS.gene009396:intron | 35.0% |
| ! | GAACTGATTCAATACAGGAA+AGG | - | chr3.1:3493810-3493829 | MS.gene009396:CDS | 35.0% |
| ! | GCTGTACTTGTAATTTTCCA+GGG | - | chr3.1:3489834-3489853 | MS.gene009396:intron | 35.0% |
| ! | GGCCTTTTGAATGACATTAT+TGG | - | chr3.1:3491748-3491767 | MS.gene009396:intron | 35.0% |
| ! | TAACCAAGCTTTATCTGACT+AGG | + | chr3.1:3491346-3491365 | None:intergenic | 35.0% |
| ! | TATGTCTGAAAACAGGTTGA+TGG | - | chr3.1:3492584-3492603 | MS.gene009396:intron | 35.0% |
| ! | TGTACTTGTAATTTTCCAGG+GGG | - | chr3.1:3489836-3489855 | MS.gene009396:intron | 35.0% |
| ! | TTCTGAGGAATCCTACAATT+TGG | - | chr3.1:3493155-3493174 | MS.gene009396:intron | 35.0% |
| ! | TTTGGATATCTAATGATGGG+CGG | + | chr3.1:3491162-3491181 | None:intergenic | 35.0% |
| !! | AACACTATGTTGGTTCAATG+TGG | + | chr3.1:3488854-3488873 | None:intergenic | 35.0% |
| !! | CATGGTTGGATATTTTTCGA+AGG | - | chr3.1:3492739-3492758 | MS.gene009396:intron | 35.0% |
| !! | GAAAGTACCTAAAGATTACG+AGG | + | chr3.1:3488458-3488477 | None:intergenic | 35.0% |
| !! | TGGGCAGAATCTTTGTTATT+TGG | - | chr3.1:3492625-3492644 | MS.gene009396:intron | 35.0% |
| !! | TTATTTCTGTCTACTAGCCT+AGG | + | chr3.1:3490037-3490056 | None:intergenic | 35.0% |
| !!! | CTCTAACCTTTTTGAGTCAT+TGG | - | chr3.1:3488485-3488504 | MS.gene009396:intron | 35.0% |
| !!! | GTTTTTTTTCTTCTTCCCAC+TGG | - | chr3.1:3489607-3489626 | MS.gene009396:intron | 35.0% |
| !!! | TGTGGTTTTTTAGGTGCAAT+AGG | - | chr3.1:3492328-3492347 | MS.gene009396:CDS | 35.0% |
| !!! | TTTTTTTGGCAGTCAATAGG+AGG | - | chr3.1:3489062-3489081 | MS.gene009396:intron | 35.0% |
| AAACAGGTAGGCACAGAAAA+TGG | + | chr3.1:3491853-3491872 | None:intergenic | 40.0% | |
| ACAGGTCAACATCATAGTAG+AGG | + | chr3.1:3492676-3492695 | None:intergenic | 40.0% | |
| AGTTCAACTCATGCCCTTAA+AGG | + | chr3.1:3488416-3488435 | None:intergenic | 40.0% | |
| ATCATATAGGGACCATAAGG+AGG | + | chr3.1:3491472-3491491 | None:intergenic | 40.0% | |
| ATGGACAAGCTTGATAAAGC+TGG | + | chr3.1:3488349-3488368 | None:intergenic | 40.0% | |
| ATTGTTGAGTGCAAGAGAGT+CGG | - | chr3.1:3492516-3492535 | MS.gene009396:intron | 40.0% | |
| CAAGCTGCATTCAACTAGAT+TGG | - | chr3.1:3490937-3490956 | MS.gene009396:CDS | 40.0% | |
| CAATCTAGTTGAATGCAGCT+TGG | + | chr3.1:3490939-3490958 | None:intergenic | 40.0% | |
| CAGAATGTCTAAAAGAACCC+TGG | + | chr3.1:3493427-3493446 | None:intergenic | 40.0% | |
| CAGGTCAACATCATAGTAGA+GGG | + | chr3.1:3492675-3492694 | None:intergenic | 40.0% | |
| CTGCATTCAACTAGATTGGT+TGG | - | chr3.1:3490941-3490960 | MS.gene009396:CDS | 40.0% | |
| CTTCTGTATATCTCATCACC+AGG | + | chr3.1:3491906-3491925 | None:intergenic | 40.0% | |
| CTTGTGTGATGATACACCAA+TGG | - | chr3.1:3490910-3490929 | MS.gene009396:CDS | 40.0% | |
| CTTTGCGCTTCATGAAATTG+AGG | + | chr3.1:3490604-3490623 | None:intergenic | 40.0% | |
| GAAGATATGAGATCGAGACA+TGG | - | chr3.1:3490516-3490535 | MS.gene009396:intron | 40.0% | |
| GAGGATACATGCCAAATTGT+AGG | + | chr3.1:3493169-3493188 | None:intergenic | 40.0% | |
| GAGTAGGTGTCTTGGTTAAT+TGG | - | chr3.1:3489347-3489366 | MS.gene009396:intron | 40.0% | |
| GCAAGAACCTCGTAATCTTT+AGG | - | chr3.1:3488448-3488467 | MS.gene009396:intron | 40.0% | |
| GGCAAGAAGAACAAGGTTTA+TGG | - | chr3.1:3492605-3492624 | MS.gene009396:intron | 40.0% | |
| GGTGATGAGATATACAGAAG+TGG | - | chr3.1:3491906-3491925 | MS.gene009396:intron | 40.0% | |
| GTGAAACCAGTGTACTCTAT+GGG | - | chr3.1:3490338-3490357 | MS.gene009396:intron | 40.0% | |
| GTTCAACTCATGCCCTTAAA+GGG | + | chr3.1:3488415-3488434 | None:intergenic | 40.0% | |
| TCATGAGTTGCTAAAGGAAC+TGG | + | chr3.1:3489301-3489320 | None:intergenic | 40.0% | |
| TCCTACATGTGCTTAAGTGT+GGG | - | chr3.1:3490100-3490119 | MS.gene009396:intron | 40.0% | |
| TCTGTATATCTCATCACCAG+GGG | + | chr3.1:3491904-3491923 | None:intergenic | 40.0% | |
| TGAATTTCTCCCACAGAATC+TGG | - | chr3.1:3491033-3491052 | MS.gene009396:CDS | 40.0% | |
| TGATAGAGACGATGAGCATT+TGG | + | chr3.1:3492204-3492223 | None:intergenic | 40.0% | |
| TGATGAGAAAGTGGAAGAGA+AGG | - | chr3.1:3489141-3489160 | MS.gene009396:intron | 40.0% | |
| TGCTAAGCTACAGAGGATAT+TGG | - | chr3.1:3493400-3493419 | MS.gene009396:intron | 40.0% | |
| TGCTCATTTGCAAAAGCAGT+AGG | - | chr3.1:3489411-3489430 | MS.gene009396:intron | 40.0% | |
| TGGCCCTATAAAATCAACAG+TGG | + | chr3.1:3490419-3490438 | None:intergenic | 40.0% | |
| TGTGAAACCAGTGTACTCTA+TGG | - | chr3.1:3490337-3490356 | MS.gene009396:intron | 40.0% | |
| TTCCTACATGTGCTTAAGTG+TGG | - | chr3.1:3490099-3490118 | MS.gene009396:intron | 40.0% | |
| TTTGAGAACACTCAGTTGTC+TGG | - | chr3.1:3492487-3492506 | MS.gene009396:intron | 40.0% | |
| ! | AACGCACTTTAGATTTTCCG+GGG | - | chr3.1:3489501-3489520 | MS.gene009396:intron | 40.0% |
| ! | AGATGGCGATCCAAAACTTT+TGG | + | chr3.1:3493858-3493877 | None:intergenic | 40.0% |
| ! | AGTTGACTCACACCCTTTAA+GGG | - | chr3.1:3488400-3488419 | MS.gene009396:intron | 40.0% |
| ! | CAGTCTTCCTTCTTTTCCTT+TGG | + | chr3.1:3488293-3488312 | None:intergenic | 40.0% |
| ! | CATATTTTGTCAGCAACCCT+TGG | - | chr3.1:3491232-3491251 | MS.gene009396:intron | 40.0% |
| ! | GCCTAGAACTGATTCAATAC+AGG | - | chr3.1:3493805-3493824 | MS.gene009396:CDS | 40.0% |
| ! | TGCTAGTTTACGAGAACATG+AGG | - | chr3.1:3490454-3490473 | MS.gene009396:intron | 40.0% |
| ! | TGGAGTTAATAGAAGGGTAC+TGG | - | chr3.1:3491705-3491724 | MS.gene009396:intron | 40.0% |
| ! | TTGTGCGGATCCAAAAGTTT+TGG | - | chr3.1:3493845-3493864 | MS.gene009396:CDS | 40.0% |
| ! | TTTTTCTTCTTCCCACTGGA+TGG | - | chr3.1:3489611-3489630 | MS.gene009396:intron | 40.0% |
| !! | ACACAGTCTTTGAAGTAGCA+GGG | - | chr3.1:3492867-3492886 | MS.gene009396:intron | 40.0% |
| !! | ATATCTAATGATGGGCGGAA+TGG | + | chr3.1:3491157-3491176 | None:intergenic | 40.0% |
| !! | CATGAAGAGGCCTATTTTTC+AGG | + | chr3.1:3493253-3493272 | None:intergenic | 40.0% |
| !! | GAAAAGTTGGTACACCTGAA+AGG | - | chr3.1:3493358-3493377 | MS.gene009396:intron | 40.0% |
| !! | GCTATGTTTGCTTTGAAGGA+TGG | - | chr3.1:3490983-3491002 | MS.gene009396:CDS | 40.0% |
| !! | TACACAGTCTTTGAAGTAGC+AGG | - | chr3.1:3492866-3492885 | MS.gene009396:intron | 40.0% |
| !! | TTAGGCACTGATAAAGTCGA+AGG | + | chr3.1:3488696-3488715 | None:intergenic | 40.0% |
| !! | TTTTAGTCTTTTAGGGAGGG+TGG | + | chr3.1:3491782-3491801 | None:intergenic | 40.0% |
| AAACCAGAGACCTTACTAGG+GGG | - | chr3.1:3488773-3488792 | MS.gene009396:CDS | 45.0% | |
| AAATCACCGTTAACCGATGG+CGG | - | chr3.1:3487596-3487615 | MS.gene009396:CDS | 45.0% | |
| AATGAGCAGTGCTTGCTCTT+TGG | - | chr3.1:3489763-3489782 | MS.gene009396:intron | 45.0% | |
| ACCCACACTTAAGCACATGT+AGG | + | chr3.1:3490104-3490123 | None:intergenic | 45.0% | |
| AGACGATGAGCATTTGGAGA+AGG | + | chr3.1:3492198-3492217 | None:intergenic | 45.0% | |
| AGAGAACACCCTACTGAAAG+TGG | + | chr3.1:3488742-3488761 | None:intergenic | 45.0% | |
| AGCCTTTCCTTTGGTAAGGT+GGG | + | chr3.1:3493197-3493216 | None:intergenic | 45.0% | |
| AGTACGAATTGGTGAAGCGA+CGG | - | chr3.1:3487651-3487670 | MS.gene009396:CDS | 45.0% | |
| ATCGAACGAAGGAGAGTTCA+TGG | - | chr3.1:3487755-3487774 | MS.gene009396:intron | 45.0% | |
| CAAACCAGAGACCTTACTAG+GGG | - | chr3.1:3488772-3488791 | MS.gene009396:CDS | 45.0% | |
| CAATAGGAGGCTTGATGAGT+GGG | - | chr3.1:3489075-3489094 | MS.gene009396:intron | 45.0% | |
| CCAAACCAGAGACCTTACTA+GGG | - | chr3.1:3488771-3488790 | MS.gene009396:CDS | 45.0% | |
| CCATAGCCTTTCCTTTGGTA+AGG | + | chr3.1:3493201-3493220 | None:intergenic | 45.0% | |
| CCTTACCAAAGGAAAGGCTA+TGG | - | chr3.1:3493198-3493217 | MS.gene009396:intron | 45.0% | |
| CGACCTAGTCAGATAAAGCT+TGG | - | chr3.1:3491340-3491359 | MS.gene009396:intron | 45.0% | |
| CTAAAGCATGGGCATGTGTT+TGG | + | chr3.1:3491180-3491199 | None:intergenic | 45.0% | |
| CTACAGAGGATATTGGACCA+GGG | - | chr3.1:3493407-3493426 | MS.gene009396:intron | 45.0% | |
| CTGTATATCTCATCACCAGG+GGG | + | chr3.1:3491903-3491922 | None:intergenic | 45.0% | |
| CTGTCAAAGTCATCGAACGA+AGG | - | chr3.1:3487744-3487763 | MS.gene009396:intron | 45.0% | |
| CTTCGTTCGATGACTTTGAC+AGG | + | chr3.1:3487746-3487765 | None:intergenic | 45.0% | |
| GAAACTTGACCAGCTTGATC+TGG | - | chr3.1:3489099-3489118 | MS.gene009396:intron | 45.0% | |
| GATACATGGCACCAATAGCA+TGG | + | chr3.1:3488674-3488693 | None:intergenic | 45.0% | |
| GATACTTTCCATCCCTCCAA+CGG | + | chr3.1:3487721-3487740 | None:intergenic | 45.0% | |
| GATCGATGAGACACATGTTG+AGG | - | chr3.1:3489975-3489994 | MS.gene009396:intron | 45.0% | |
| GCAAAAGCAGTAGGCATAGA+AGG | - | chr3.1:3489420-3489439 | MS.gene009396:intron | 45.0% | |
| GCGGGGATATATGAGATGTT+TGG | - | chr3.1:3493625-3493644 | MS.gene009396:intron | 45.0% | |
| GGCATAAACCAACCTCTGTT+GGG | + | chr3.1:3488374-3488393 | None:intergenic | 45.0% | |
| TAAGGTAGTTCCCATAAGCG+AGG | - | chr3.1:3488535-3488554 | MS.gene009396:intron | 45.0% | |
| TACTGCAGTTGTCCTCCTTA+TGG | - | chr3.1:3491457-3491476 | MS.gene009396:intron | 45.0% | |
| TAGCAGTCCAAGGTCTGAAA+GGG | + | chr3.1:3493385-3493404 | None:intergenic | 45.0% | |
| TAGCCTTTCCTTTGGTAAGG+TGG | + | chr3.1:3493198-3493217 | None:intergenic | 45.0% | |
| TATCAGCCCATAGAGTACAC+TGG | + | chr3.1:3490347-3490366 | None:intergenic | 45.0% | |
| TCAATAGGAGGCTTGATGAG+TGG | - | chr3.1:3489074-3489093 | MS.gene009396:intron | 45.0% | |
| TCGAAGAAGGAGGGAAAAGT+TGG | - | chr3.1:3493345-3493364 | MS.gene009396:intron | 45.0% | |
| TCTCATCGATCTTCCTCTTC+TGG | + | chr3.1:3489966-3489985 | None:intergenic | 45.0% | |
| TGATGAAAGAGGATGCCACA+TGG | - | chr3.1:3492721-3492740 | MS.gene009396:intron | 45.0% | |
| TGGGTCCCAATGACTCAAAA+AGG | + | chr3.1:3488494-3488513 | None:intergenic | 45.0% | |
| TTAGCAGTCCAAGGTCTGAA+AGG | + | chr3.1:3493386-3493405 | None:intergenic | 45.0% | |
| TTTCCTTTGGTAAGGTGGGA+GGG | + | chr3.1:3493193-3493212 | None:intergenic | 45.0% | |
| TTTGGATCGCCATCTCAAAG+CGG | - | chr3.1:3493863-3493882 | MS.gene009396:CDS | 45.0% | |
| ! | ACGCACTTTAGATTTTCCGG+GGG | - | chr3.1:3489502-3489521 | MS.gene009396:intron | 45.0% |
| ! | AGGACAGCATGTCATTTGTG+CGG | - | chr3.1:3493830-3493849 | MS.gene009396:CDS | 45.0% |
| ! | AGTAGGGTGTTCTCTCCTAT+AGG | - | chr3.1:3488747-3488766 | MS.gene009396:CDS | 45.0% |
| ! | CCTAGTAAGGTCTCTGGTTT+GGG | + | chr3.1:3488773-3488792 | None:intergenic | 45.0% |
| ! | CTAACTGGCCACTTTCAGTA+GGG | - | chr3.1:3488731-3488750 | MS.gene009396:CDS | 45.0% |
| ! | GACTAGGTCGATTAGCTACA+CGG | + | chr3.1:3491330-3491349 | None:intergenic | 45.0% |
| ! | GAGTTGACTCACACCCTTTA+AGG | - | chr3.1:3488399-3488418 | MS.gene009396:intron | 45.0% |
| ! | GGCAGTTGTTGATGAGAAAG+TGG | - | chr3.1:3489132-3489151 | MS.gene009396:intron | 45.0% |
| !! | AGAGGTTGGTTTATGCCGTA+AGG | - | chr3.1:3488377-3488396 | MS.gene009396:intron | 45.0% |
| !! | GGTTGATGGCAAGAAGAACA+AGG | - | chr3.1:3492598-3492617 | MS.gene009396:intron | 45.0% |
| !! | GTTTGCTTTGAAGGATGGAG+TGG | - | chr3.1:3490988-3491007 | MS.gene009396:CDS | 45.0% |
| !! | TAATGATGGGCGGAATGGAA+TGG | + | chr3.1:3491152-3491171 | None:intergenic | 45.0% |
| !! | AAAAAAATTAAAAAAAAATG+TGG | + | chr3.1:3488813-3488832 | None:intergenic | 5.0% |
| !! | ATTCAAAAAATTATAATTTA+TGG | + | chr3.1:3491018-3491037 | None:intergenic | 5.0% |
| !!! | TACTATAATTTTATTTATTT+AGG | - | chr3.1:3492908-3492927 | MS.gene009396:intron | 5.0% |
| AACCAACCTCTGTTGGGCAA+TGG | + | chr3.1:3488368-3488387 | None:intergenic | 50.0% | |
| AGAACACTCAGTTGTCTGGC+AGG | - | chr3.1:3492491-3492510 | MS.gene009396:intron | 50.0% | |
| AGCAGTCCAAGGTCTGAAAG+GGG | + | chr3.1:3493384-3493403 | None:intergenic | 50.0% | |
| AGGGATGTGAAGGGGGAAAA+AGG | + | chr3.1:3490668-3490687 | None:intergenic | 50.0% | |
| ATCTTCTGTGCTTCCGTTGG+AGG | - | chr3.1:3487676-3487695 | MS.gene009396:CDS | 50.0% | |
| CATCGATCTTCCTCTTCTGG+TGG | + | chr3.1:3489963-3489982 | None:intergenic | 50.0% | |
| CCACAGATTCCAGATCAAGC+TGG | + | chr3.1:3489111-3489130 | None:intergenic | 50.0% | |
| CCCAAACCAGAGACCTTACT+AGG | - | chr3.1:3488770-3488789 | MS.gene009396:CDS | 50.0% | |
| CCCTAGTAAGGTCTCTGGTT+TGG | + | chr3.1:3488774-3488793 | None:intergenic | 50.0% | |
| CCTACTGAAAGTGGCCAGTT+AGG | + | chr3.1:3488733-3488752 | None:intergenic | 50.0% | |
| CGAAGGAGAGTTCATGGATG+TGG | - | chr3.1:3487761-3487780 | MS.gene009396:intron | 50.0% | |
| CGCTTCACCAATTCGTACTC+CGG | + | chr3.1:3487650-3487669 | None:intergenic | 50.0% | |
| CGGCATAAACCAACCTCTGT+TGG | + | chr3.1:3488375-3488394 | None:intergenic | 50.0% | |
| CTCCCACCTTACCAAAGGAA+AGG | - | chr3.1:3493192-3493211 | MS.gene009396:intron | 50.0% | |
| CTCTGTAGCTTAGCAGTCCA+AGG | + | chr3.1:3493395-3493414 | None:intergenic | 50.0% | |
| CTTGGACTGCTAAGCTACAG+AGG | - | chr3.1:3493393-3493412 | MS.gene009396:intron | 50.0% | |
| CTTTCCTTTGGTAAGGTGGG+AGG | + | chr3.1:3493194-3493213 | None:intergenic | 50.0% | |
| GAAAGAGGATGCCACATGGT+TGG | - | chr3.1:3492725-3492744 | MS.gene009396:intron | 50.0% | |
| GAACATAAACTGATGCCCCC+TGG | + | chr3.1:3489854-3489873 | None:intergenic | 50.0% | |
| GAATGCAGCTTGGTTGCCAT+TGG | + | chr3.1:3490929-3490948 | None:intergenic | 50.0% | |
| GAGATCTTCTGTGCTTCCGT+TGG | - | chr3.1:3487673-3487692 | MS.gene009396:CDS | 50.0% | |
| GCTACAGAGGATATTGGACC+AGG | - | chr3.1:3493406-3493425 | MS.gene009396:intron | 50.0% | |
| GGCAAATCACCGTTAACCGA+TGG | - | chr3.1:3487593-3487612 | MS.gene009396:CDS | 50.0% | |
| GGGTGTGAGTCAACTCCTTA+CGG | + | chr3.1:3488395-3488414 | None:intergenic | 50.0% | |
| TAGCAGCATCAAGCTCTTCG+TGG | + | chr3.1:3490439-3490458 | None:intergenic | 50.0% | |
| TGTGATCTTAAGCATCCCCC+TGG | - | chr3.1:3491885-3491904 | MS.gene009396:intron | 50.0% | |
| ! | AGAGCAGCTTCAGAGGCATA+TGG | - | chr3.1:3490622-3490641 | MS.gene009396:intron | 50.0% |
| ! | AGATTTTCCGGGGGAAGTAG+AGG | - | chr3.1:3489511-3489530 | MS.gene009396:intron | 50.0% |
| ! | ATGAGTTGAACTCCCGCTAG+TGG | - | chr3.1:3488424-3488443 | MS.gene009396:intron | 50.0% |
| ! | CCAGCTTGATCTGGAATCTG+TGG | - | chr3.1:3489108-3489127 | MS.gene009396:intron | 50.0% |
| ! | CCTAACTGGCCACTTTCAGT+AGG | - | chr3.1:3488730-3488749 | MS.gene009396:CDS | 50.0% |
| ! | CTTCAGAGGCATATGGTGAG+TGG | - | chr3.1:3490629-3490648 | MS.gene009396:intron | 50.0% |
| ! | GCTTGATCTGGAATCTGTGG+AGG | - | chr3.1:3489111-3489130 | MS.gene009396:intron | 50.0% |
| ! | TAACGGTGATTTGCCGTGAC+CGG | + | chr3.1:3487588-3487607 | None:intergenic | 50.0% |
| ! | TACTCCGGTACCGAATCTGA+CGG | + | chr3.1:3487635-3487654 | None:intergenic | 50.0% |
| ! | TTCGGTACCGGAGTACGAAT+TGG | - | chr3.1:3487640-3487659 | MS.gene009396:CDS | 50.0% |
| !!! | GTAATTTTCCAGGGGGCATC+AGG | - | chr3.1:3489843-3489862 | MS.gene009396:intron | 50.0% |
| ACAGAGCTGACACCATCCAG+TGG | + | chr3.1:3489626-3489645 | None:intergenic | 55.0% | |
| AGATGACACGCCACCAGAAG+AGG | - | chr3.1:3489950-3489969 | MS.gene009396:intron | 55.0% | |
| AGCGCAAAGAGCAGCTTCAG+AGG | - | chr3.1:3490615-3490634 | MS.gene009396:intron | 55.0% | |
| AGGCAGGCAAAGTCTTGCAG+AGG | + | chr3.1:3489547-3489566 | None:intergenic | 55.0% | |
| AGGTCTGAAAGGGGCCTTTC+AGG | + | chr3.1:3493375-3493394 | None:intergenic | 55.0% | |
| ATCTCAAAGCGGCTGGCAGA+GGG | - | chr3.1:3493874-3493893 | MS.gene009396:CDS | 55.0% | |
| CAGAGCTGACACCATCCAGT+GGG | + | chr3.1:3489625-3489644 | None:intergenic | 55.0% | |
| CTGTGCTTCCGTTGGAGGTT+GGG | - | chr3.1:3487681-3487700 | MS.gene009396:CDS | 55.0% | |
| GAAAGGCCCCTTTCAGACCT+TGG | - | chr3.1:3493375-3493394 | MS.gene009396:intron | 55.0% | |
| GATCCCCCTAGTAAGGTCTC+TGG | + | chr3.1:3488779-3488798 | None:intergenic | 55.0% | |
| GCACCAATCAGCGCGGAAAA+CGG | - | chr3.1:3487548-3487567 | MS.gene009396:CDS | 55.0% | |
| GCCTAAACCTCTACTTCCCC+CGG | + | chr3.1:3489521-3489540 | None:intergenic | 55.0% | |
| GCTTGTCCATTGCCCAACAG+AGG | - | chr3.1:3488359-3488378 | MS.gene009396:intron | 55.0% | |
| GGACTCAGATCCCCCTAGTA+AGG | + | chr3.1:3488786-3488805 | None:intergenic | 55.0% | |
| GTCCATTGCCCAACAGAGGT+TGG | - | chr3.1:3488363-3488382 | MS.gene009396:intron | 55.0% | |
| TCACCCTCCCACCTTACCAA+AGG | - | chr3.1:3493187-3493206 | MS.gene009396:intron | 55.0% | |
| TCCGGGGGAAGTAGAGGTTT+AGG | - | chr3.1:3489517-3489536 | MS.gene009396:intron | 55.0% | |
| TCTGTGCTTCCGTTGGAGGT+TGG | - | chr3.1:3487680-3487699 | MS.gene009396:CDS | 55.0% | |
| TCTTCAAACCTGATGCCCCC+TGG | + | chr3.1:3489933-3489952 | None:intergenic | 55.0% | |
| TTTGGTAAGGTGGGAGGGTG+AGG | + | chr3.1:3493188-3493207 | None:intergenic | 55.0% | |
| !! | GGTCTCTGGTTTGGGCCTAT+AGG | + | chr3.1:3488765-3488784 | None:intergenic | 55.0% |
| CATCTCAAAGCGGCTGGCAG+AGG | - | chr3.1:3493873-3493892 | MS.gene009396:CDS | 60.0% | |
| CGAGGTTCTTGCGCCACTAG+CGG | + | chr3.1:3488440-3488459 | None:intergenic | 60.0% | |
| GAGGTTCTTGCGCCACTAGC+GGG | + | chr3.1:3488439-3488458 | None:intergenic | 60.0% | |
| GATCGCCATCTCAAAGCGGC+TGG | - | chr3.1:3493867-3493886 | MS.gene009396:CDS | 60.0% | |
| GTACCGAATCTGACGGCGGA+GGG | + | chr3.1:3487628-3487647 | None:intergenic | 60.0% | |
| TCTCAAAGCGGCTGGCAGAG+GGG | - | chr3.1:3493875-3493894 | MS.gene009396:CDS | 60.0% | |
| ! | CGCATGCCGCCATCGGTTAA+CGG | + | chr3.1:3487605-3487624 | None:intergenic | 60.0% |
| ! | GTGATGTGCCGTTGGAGGGA+TGG | - | chr3.1:3487710-3487729 | MS.gene009396:CDS | 60.0% |
| ! | TCCGCCGTCAGATTCGGTAC+CGG | - | chr3.1:3487628-3487647 | MS.gene009396:CDS | 60.0% |
| ! | TCCGGTACCGAATCTGACGG+CGG | + | chr3.1:3487632-3487651 | None:intergenic | 60.0% |
| !! | CTCTGCCAGCCGCTTTGAGA+TGG | + | chr3.1:3493875-3493894 | None:intergenic | 60.0% |
| !!! | GTGCCGTTTTCCGCGCTGAT+TGG | + | chr3.1:3487554-3487573 | None:intergenic | 60.0% |
| ACGCGCGTCCCAACCTCCAA+CGG | + | chr3.1:3487692-3487711 | None:intergenic | 65.0% | |
| CTCAAAGCGGCTGGCAGAGG+GGG | - | chr3.1:3493876-3493895 | MS.gene009396:CDS | 65.0% | |
| GCTCGACGCACCAATCAGCG+CGG | - | chr3.1:3487541-3487560 | MS.gene009396:CDS | 65.0% | |
| ! | CGGTGATTTGCCGTGACCGG+CGG | + | chr3.1:3487585-3487604 | None:intergenic | 65.0% |
| ! | GCGCGTGATGTGCCGTTGGA+GGG | - | chr3.1:3487706-3487725 | MS.gene009396:CDS | 65.0% |
| ! | GGTACCGAATCTGACGGCGG+AGG | + | chr3.1:3487629-3487648 | None:intergenic | 65.0% |
| CGCGGAAAACGGCACCGCTC+CGG | - | chr3.1:3487559-3487578 | MS.gene009396:CDS | 70.0% | |
| GATTTGCCGTGACCGGCGGC+CGG | + | chr3.1:3487581-3487600 | None:intergenic | 70.0% | |
| GCGCCCTCCGCCGTCAGATT+CGG | - | chr3.1:3487622-3487641 | MS.gene009396:CDS | 70.0% | |
| GGACGCGCGTGATGTGCCGT+TGG | - | chr3.1:3487702-3487721 | MS.gene009396:CDS | 70.0% | |
| ! | CGCGCGTGATGTGCCGTTGG+AGG | - | chr3.1:3487705-3487724 | MS.gene009396:CDS | 70.0% |
| ! | CGGAGGGCGCATGCCGCCAT+CGG | + | chr3.1:3487612-3487631 | None:intergenic | 75.0% |
| ! | AACGGCACCGCTCCGGCCGC+CGG | - | chr3.1:3487566-3487585 | MS.gene009396:CDS | 80.0% |
| ! | ACCGCTCCGGCCGCCGGTCA+CGG | - | chr3.1:3487572-3487591 | MS.gene009396:CDS | 80.0% |
| ! | GCCGTGACCGGCGGCCGGAG+CGG | + | chr3.1:3487576-3487595 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 3487533 | 3493953 | 3487533 | ID=MS.gene009396 |
| chr3.1 | mRNA | 3487533 | 3493953 | 3487533 | ID=MS.gene009396.t1;Parent=MS.gene009396 |
| chr3.1 | exon | 3493665 | 3493953 | 3493665 | ID=MS.gene009396.t1.exon1;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3493665 | 3493953 | 3493665 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3492324 | 3492412 | 3492324 | ID=MS.gene009396.t1.exon2;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3492324 | 3492412 | 3492324 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3491490 | 3491552 | 3491490 | ID=MS.gene009396.t1.exon3;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3491490 | 3491552 | 3491490 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3490843 | 3491052 | 3490843 | ID=MS.gene009396.t1.exon4;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3490843 | 3491052 | 3490843 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3489539 | 3489607 | 3489539 | ID=MS.gene009396.t1.exon5;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3489539 | 3489607 | 3489539 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3488726 | 3488887 | 3488726 | ID=MS.gene009396.t1.exon6;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3488726 | 3488887 | 3488726 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3488246 | 3488339 | 3488246 | ID=MS.gene009396.t1.exon7;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3488246 | 3488339 | 3488246 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3488010 | 3488152 | 3488010 | ID=MS.gene009396.t1.exon8;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3488010 | 3488152 | 3488010 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| chr3.1 | exon | 3487533 | 3487736 | 3487533 | ID=MS.gene009396.t1.exon9;Parent=MS.gene009396.t1 |
| chr3.1 | CDS | 3487533 | 3487736 | 3487533 | ID=cds.MS.gene009396.t1;Parent=MS.gene009396.t1 |
| Gene Sequence |
| Protein sequence |
