Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009397.t1 | XP_003598140.2 | 100 | 427 | 0 | 0 | 1 | 427 | 1 | 427 | 6.10E-253 | 882.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009397.t1 | Q9LXD7 | 89.8 | 391 | 39 | 1 | 37 | 427 | 43 | 432 | 7.6e-212 | 737.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009397.t1 | G7IVB8 | 100.0 | 427 | 0 | 0 | 1 | 427 | 1 | 427 | 4.4e-253 | 882.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009397 | MS.gene058355 | PPI |
| MS.gene009397 | MS.gene009396 | PPI |
| MS.gene009397 | MS.gene51535 | PPI |
| MS.gene009397 | MS.gene56191 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009397.t1 | MTR_3g007710 | 100.000 | 427 | 0 | 0 | 1 | 427 | 1 | 427 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009397.t1 | AT5G09740 | 82.989 | 435 | 63 | 3 | 1 | 427 | 1 | 432 | 0.0 | 743 |
| MS.gene009397.t1 | AT5G64610 | 83.410 | 434 | 63 | 3 | 1 | 427 | 1 | 432 | 0.0 | 741 |
| MS.gene009397.t1 | AT5G09740 | 85.780 | 218 | 29 | 2 | 212 | 427 | 137 | 354 | 1.07e-126 | 371 |
| MS.gene009397.t1 | AT5G09740 | 64.773 | 176 | 51 | 3 | 1 | 168 | 1 | 173 | 7.87e-70 | 225 |
Find 121 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGCAGAATCTTTGTTATT+TGG | 0.168973 | 3.4:-3331857 | MS.gene009397:CDS |
| CAATATATCTTCAGCTTTAA+TGG | 0.187495 | 3.4:+3330713 | None:intergenic |
| GGCAAGAAGAACAAGGTTTA+TGG | 0.235453 | 3.4:-3331877 | MS.gene009397:CDS |
| AGGTCTGAAAGGGGCCTTTC+AGG | 0.239360 | 3.4:+3331110 | None:intergenic |
| AGATGGCGATCCAAAACTTT+TGG | 0.251790 | 3.4:+3330627 | None:intergenic |
| TTCTGAGGAATCCTACAATT+TGG | 0.272691 | 3.4:-3331327 | MS.gene009397:CDS |
| TCCTGTATTGAATCAGTTCT+AGG | 0.273115 | 3.4:+3330676 | None:intergenic |
| CTGTGCTTCCGTTGGAGGTT+GGG | 0.316088 | 3.4:-3336802 | MS.gene009397:CDS |
| TCTCATCGATCTTCCTCTTC+TGG | 0.332710 | 3.4:+3334519 | None:intergenic |
| TTGTGCGGATCCAAAAGTTT+TGG | 0.348879 | 3.4:-3330637 | MS.gene009397:CDS |
| TCATTGTATTCTGATGGAAA+TGG | 0.388643 | 3.4:+3333934 | None:intergenic |
| ACCGCTCCGGCCGCCGGTCA+CGG | 0.391865 | 3.4:-3336911 | MS.gene009397:CDS |
| GGTTCATACACTCAGTATAA+TGG | 0.398788 | 3.4:+3336675 | None:intergenic |
| CATTGTATTCTGATGGAAAT+GGG | 0.401991 | 3.4:+3333935 | None:intergenic |
| GCGCCCTCCGCCGTCAGATT+CGG | 0.404420 | 3.4:-3336861 | MS.gene009397:CDS |
| GAAACTTGACCAGCTTGATC+TGG | 0.410348 | 3.4:-3335383 | MS.gene009397:CDS |
| ATCTTCTGTGCTTCCGTTGG+AGG | 0.411645 | 3.4:-3336807 | MS.gene009397:CDS |
| CCATAGCCTTTCCTTTGGTA+AGG | 0.412700 | 3.4:+3331284 | None:intergenic |
| CTTCGTTCGATGACTTTGAC+AGG | 0.414188 | 3.4:+3336740 | None:intergenic |
| TTCGGTACCGGAGTACGAAT+TGG | 0.415710 | 3.4:-3336843 | MS.gene009397:CDS |
| TCTGTGCTTCCGTTGGAGGT+TGG | 0.423441 | 3.4:-3336803 | MS.gene009397:CDS |
| GCAAGAAGAACAAGGTTTAT+GGG | 0.425430 | 3.4:-3331876 | MS.gene009397:CDS |
| CGCATGCCGCCATCGGTTAA+CGG | 0.430462 | 3.4:+3336881 | None:intergenic |
| TTTGGTAAGGTGGGAGGGTG+AGG | 0.431925 | 3.4:+3331297 | None:intergenic |
| ACAAAACATAGAACAGAAAC+AGG | 0.434714 | 3.4:+3331791 | None:intergenic |
| ATCGAACGAAGGAGAGTTCA+TGG | 0.434993 | 3.4:-3336728 | MS.gene009397:CDS |
| TGCTAAGCTACAGAGGATAT+TGG | 0.435547 | 3.4:-3331082 | MS.gene009397:CDS |
| CGCGGAAAACGGCACCGCTC+CGG | 0.438216 | 3.4:-3336924 | MS.gene009397:CDS |
| CTTTGCGCTTCATGAAATTG+AGG | 0.443193 | 3.4:+3333881 | None:intergenic |
| CATCTCAAAGCGGCTGGCAG+AGG | 0.448744 | 3.4:-3330609 | MS.gene009397:CDS |
| CTCTGCCAGCCGCTTTGAGA+TGG | 0.450706 | 3.4:+3330610 | None:intergenic |
| AGCCTTTCCTTTGGTAAGGT+GGG | 0.455889 | 3.4:+3331288 | None:intergenic |
| GCCTAGAACTGATTCAATAC+AGG | 0.461707 | 3.4:-3330677 | MS.gene009397:CDS |
| TATGTCTGAAAACAGGTTGA+TGG | 0.461817 | 3.4:-3331898 | MS.gene009397:intron |
| TAGCCTTTCCTTTGGTAAGG+TGG | 0.462887 | 3.4:+3331287 | None:intergenic |
| AAACAGTCATTGTATTCTGA+TGG | 0.463429 | 3.4:+3333928 | None:intergenic |
| CTCAAAGCGGCTGGCAGAGG+GGG | 0.465660 | 3.4:-3330606 | MS.gene009397:CDS |
| TGGTACATTGTCAATGTTTG+AGG | 0.468141 | 3.4:-3332556 | MS.gene009397:intron |
| CGCGCGTGATGTGCCGTTGG+AGG | 0.469935 | 3.4:-3336778 | MS.gene009397:CDS |
| ATCTCAAAGCGGCTGGCAGA+GGG | 0.470129 | 3.4:-3330608 | MS.gene009397:CDS |
| TAGCAGTCCAAGGTCTGAAA+GGG | 0.474333 | 3.4:+3331100 | None:intergenic |
| TAACGGTGATTTGCCGTGAC+CGG | 0.475273 | 3.4:+3336898 | None:intergenic |
| GCCGTGACCGGCGGCCGGAG+CGG | 0.475980 | 3.4:+3336910 | None:intergenic |
| TAAGGGAAACATTTCTATCA+AGG | 0.476254 | 3.4:-3331027 | MS.gene009397:intron |
| GAGGATACATGCCAAATTGT+AGG | 0.479474 | 3.4:+3331316 | None:intergenic |
| GAAAGGCCCCTTTCAGACCT+TGG | 0.481558 | 3.4:-3331107 | MS.gene009397:CDS |
| GCACCAATCAGCGCGGAAAA+CGG | 0.482626 | 3.4:-3336935 | MS.gene009397:CDS |
| CTTTCCTTTGGTAAGGTGGG+AGG | 0.482746 | 3.4:+3331291 | None:intergenic |
| AATATAGCTACTATTGAACT+TGG | 0.484396 | 3.4:-3333988 | MS.gene009397:CDS |
| TTTCCTTTGGTAAGGTGGGA+GGG | 0.485022 | 3.4:+3331292 | None:intergenic |
| GAGATCTTCTGTGCTTCCGT+TGG | 0.489681 | 3.4:-3336810 | MS.gene009397:CDS |
| AACGGCACCGCTCCGGCCGC+CGG | 0.498845 | 3.4:-3336917 | MS.gene009397:CDS |
| CTTGTGATCAAGAAATAACT+TGG | 0.501570 | 3.4:+3331834 | None:intergenic |
| GGCAGTTGTTGATGAGAAAG+TGG | 0.502028 | 3.4:-3335350 | MS.gene009397:CDS |
| TCGAAGAAGGAGGGAAAAGT+TGG | 0.503931 | 3.4:-3331137 | MS.gene009397:CDS |
| CGGAGGGCGCATGCCGCCAT+CGG | 0.503974 | 3.4:+3336874 | None:intergenic |
| CGAAGGAGAGTTCATGGATG+TGG | 0.504143 | 3.4:-3336722 | MS.gene009397:CDS |
| ACATAATACTCATAATCGTT+AGG | 0.515470 | 3.4:+3336698 | None:intergenic |
| TAGCAGCATCAAGCTCTTCG+TGG | 0.517803 | 3.4:+3334046 | None:intergenic |
| GATTTGCCGTGACCGGCGGC+CGG | 0.521552 | 3.4:+3336905 | None:intergenic |
| CAATAGGAGGCTTGATGAGT+GGG | 0.526847 | 3.4:-3335407 | MS.gene009397:CDS |
| GGTACCGAATCTGACGGCGG+AGG | 0.528098 | 3.4:+3336857 | None:intergenic |
| GCGCGTGATGTGCCGTTGGA+GGG | 0.530602 | 3.4:-3336777 | MS.gene009397:CDS |
| AGCATATGAACTTTCGAAGA+AGG | 0.533468 | 3.4:-3331150 | MS.gene009397:CDS |
| TGATGAGAAAGTGGAAGAGA+AGG | 0.537014 | 3.4:-3335341 | MS.gene009397:intron |
| CTTCTGTATATCTCATCACC+AGG | 0.541478 | 3.4:+3332579 | None:intergenic |
| CGCTTCACCAATTCGTACTC+CGG | 0.542801 | 3.4:+3336836 | None:intergenic |
| AGAGCAGCTTCAGAGGCATA+TGG | 0.542808 | 3.4:-3333860 | MS.gene009397:intron |
| GCTACAGAGGATATTGGACC+AGG | 0.545227 | 3.4:-3331076 | MS.gene009397:CDS |
| TTAGCAGTCCAAGGTCTGAA+AGG | 0.547238 | 3.4:+3331099 | None:intergenic |
| CCTTACCAAAGGAAAGGCTA+TGG | 0.547648 | 3.4:-3331284 | MS.gene009397:CDS |
| GATCGCCATCTCAAAGCGGC+TGG | 0.549312 | 3.4:-3330615 | MS.gene009397:CDS |
| TTGTGTGAATGTGATGAAAG+AGG | 0.553539 | 3.4:-3331772 | MS.gene009397:CDS |
| CTCTGTAGCTTAGCAGTCCA+AGG | 0.556626 | 3.4:+3331090 | None:intergenic |
| AGATGACACGCCACCAGAAG+AGG | 0.561058 | 3.4:-3334532 | MS.gene009397:CDS |
| CCAGCTTGATCTGGAATCTG+TGG | 0.561253 | 3.4:-3335374 | MS.gene009397:CDS |
| CGGTGATTTGCCGTGACCGG+CGG | 0.564092 | 3.4:+3336901 | None:intergenic |
| TCCGCCGTCAGATTCGGTAC+CGG | 0.569901 | 3.4:-3336855 | MS.gene009397:CDS |
| AGCGCAAAGAGCAGCTTCAG+AGG | 0.577676 | 3.4:-3333867 | MS.gene009397:CDS |
| GTGATGTGCCGTTGGAGGGA+TGG | 0.583575 | 3.4:-3336773 | MS.gene009397:CDS |
| GAAAAGTTGGTACACCTGAA+AGG | 0.588501 | 3.4:-3331124 | MS.gene009397:CDS |
| GAAAGAGGATGCCACATGGT+TGG | 0.592800 | 3.4:-3331757 | MS.gene009397:CDS |
| ACGCGCGTCCCAACCTCCAA+CGG | 0.594515 | 3.4:+3336794 | None:intergenic |
| TCAATAGGAGGCTTGATGAG+TGG | 0.598163 | 3.4:-3335408 | MS.gene009397:CDS |
| CATCGATCTTCCTCTTCTGG+TGG | 0.599237 | 3.4:+3334522 | None:intergenic |
| CTCCCACCTTACCAAAGGAA+AGG | 0.601922 | 3.4:-3331290 | MS.gene009397:CDS |
| GGACGCGCGTGATGTGCCGT+TGG | 0.602198 | 3.4:-3336781 | MS.gene009397:CDS |
| GTACCGAATCTGACGGCGGA+GGG | 0.606344 | 3.4:+3336858 | None:intergenic |
| CAGAATGTCTAAAAGAACCC+TGG | 0.606443 | 3.4:+3331058 | None:intergenic |
| ACAGGTCAACATCATAGTAG+AGG | 0.608876 | 3.4:+3331809 | None:intergenic |
| ATATGAACTTTCGAAGAAGG+AGG | 0.609381 | 3.4:-3331147 | MS.gene009397:CDS |
| GGTTGATGGCAAGAAGAACA+AGG | 0.611054 | 3.4:-3331884 | MS.gene009397:CDS |
| TATGAACTTTCGAAGAAGGA+GGG | 0.614244 | 3.4:-3331146 | MS.gene009397:CDS |
| GAACTGATTCAATACAGGAA+AGG | 0.617862 | 3.4:-3330672 | MS.gene009397:CDS |
| CTTGGACTGCTAAGCTACAG+AGG | 0.618666 | 3.4:-3331089 | MS.gene009397:CDS |
| GATACTTTCCATCCCTCCAA+CGG | 0.620693 | 3.4:+3336765 | None:intergenic |
| GCTTGATCTGGAATCTGTGG+AGG | 0.620847 | 3.4:-3335371 | MS.gene009397:CDS |
| CCACAGATTCCAGATCAAGC+TGG | 0.624499 | 3.4:+3335374 | None:intergenic |
| TCTCAAAGCGGCTGGCAGAG+GGG | 0.626973 | 3.4:-3330607 | MS.gene009397:CDS |
| GATCGATGAGACACATGTTG+AGG | 0.627249 | 3.4:-3334507 | MS.gene009397:intron |
| TTCTGTATATCTCATCACCA+GGG | 0.627558 | 3.4:+3332580 | None:intergenic |
| CAGGTCAACATCATAGTAGA+GGG | 0.630927 | 3.4:+3331810 | None:intergenic |
| GGCAAATCACCGTTAACCGA+TGG | 0.632584 | 3.4:-3336890 | MS.gene009397:CDS |
| TGCTAGTTTACGAGAACATG+AGG | 0.636420 | 3.4:-3334028 | MS.gene009397:CDS |
| AAATCACCGTTAACCGATGG+CGG | 0.636790 | 3.4:-3336887 | MS.gene009397:CDS |
| TCACCCTCCCACCTTACCAA+AGG | 0.640713 | 3.4:-3331295 | MS.gene009397:CDS |
| ATTGTATTCTGATGGAAATG+GGG | 0.647441 | 3.4:+3333936 | None:intergenic |
| AGTACGAATTGGTGAAGCGA+CGG | 0.649004 | 3.4:-3336832 | MS.gene009397:CDS |
| TACTCCGGTACCGAATCTGA+CGG | 0.663083 | 3.4:+3336851 | None:intergenic |
| GGTGATGAGATATACAGAAG+TGG | 0.664409 | 3.4:-3332576 | MS.gene009397:CDS |
| CTGTCAAAGTCATCGAACGA+AGG | 0.668378 | 3.4:-3336739 | MS.gene009397:CDS |
| AGGACAGCATGTCATTTGTG+CGG | 0.673789 | 3.4:-3330652 | MS.gene009397:CDS |
| GAAGATATGAGATCGAGACA+TGG | 0.675108 | 3.4:-3333966 | MS.gene009397:CDS |
| AGCAGTCCAAGGTCTGAAAG+GGG | 0.678912 | 3.4:+3331101 | None:intergenic |
| TCTGTATATCTCATCACCAG+GGG | 0.682304 | 3.4:+3332581 | None:intergenic |
| CTACAGAGGATATTGGACCA+GGG | 0.692391 | 3.4:-3331075 | MS.gene009397:CDS |
| TCCGGTACCGAATCTGACGG+CGG | 0.699572 | 3.4:+3336854 | None:intergenic |
| TTTGGATCGCCATCTCAAAG+CGG | 0.719564 | 3.4:-3330619 | MS.gene009397:CDS |
| CTGTATATCTCATCACCAGG+GGG | 0.726804 | 3.4:+3332582 | None:intergenic |
| TGATGAAAGAGGATGCCACA+TGG | 0.748395 | 3.4:-3331761 | MS.gene009397:CDS |
| GCTCGACGCACCAATCAGCG+CGG | 0.754918 | 3.4:-3336942 | MS.gene009397:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAATATTTTACTTG+CGG | - | chr3.4:3336667-3336686 | MS.gene009397:intron | 10.0% |
| !!! | TTTTTTGATCTTTTTTTTTT+TGG | - | chr3.4:3332109-3332128 | MS.gene009397:intron | 10.0% |
| !! | AAAAAAAACTTGAATTATTG+TGG | + | chr3.4:3332657-3332676 | None:intergenic | 15.0% |
| !! | AAAAATTACAAATATCTAAC+AGG | + | chr3.4:3335856-3335875 | None:intergenic | 15.0% |
| !! | AAAAGTAATCAATATCAATA+AGG | + | chr3.4:3336177-3336196 | None:intergenic | 15.0% |
| !! | AAAATTACAAATATCTAACA+GGG | + | chr3.4:3335855-3335874 | None:intergenic | 15.0% |
| !! | AACATATCAATATCAATATA+TGG | - | chr3.4:3331970-3331989 | MS.gene009397:intron | 15.0% |
| !! | AATATGAAAGTTTATGTATT+AGG | - | chr3.4:3336734-3336753 | MS.gene009397:CDS | 15.0% |
| !! | AATTATATAATAACAAACCT+AGG | - | chr3.4:3333078-3333097 | MS.gene009397:intron | 15.0% |
| !! | AATTGTGATATTATTTAGTT+GGG | - | chr3.4:3333347-3333366 | MS.gene009397:intron | 15.0% |
| !! | ACTTCAATTTAATGAAATTT+AGG | - | chr3.4:3330918-3330937 | MS.gene009397:intron | 15.0% |
| !! | AGTTTAAGTAAAATTCATAA+TGG | - | chr3.4:3336355-3336374 | MS.gene009397:intron | 15.0% |
| !! | ATATAAATATTCTTTCTACT+GGG | - | chr3.4:3335339-3335358 | MS.gene009397:intron | 15.0% |
| !! | ATATAATAACTCAATCATAT+AGG | + | chr3.4:3334546-3334565 | None:intergenic | 15.0% |
| !! | ATTAAAAAAAAATGTGGAAT+TGG | + | chr3.4:3331867-3331886 | None:intergenic | 15.0% |
| !! | CTTCAATTTAATGAAATTTA+GGG | - | chr3.4:3330919-3330938 | MS.gene009397:intron | 15.0% |
| !! | TAATTGTGATATTATTTAGT+TGG | - | chr3.4:3333346-3333365 | MS.gene009397:intron | 15.0% |
| !! | TATAATAACTCAATCATATA+GGG | + | chr3.4:3334545-3334564 | None:intergenic | 15.0% |
| !! | TGTTATTATTATAAACACTA+AGG | - | chr3.4:3334436-3334455 | MS.gene009397:intron | 15.0% |
| !! | TTAACTATTGAAAAAGTTTA+GGG | + | chr3.4:3331578-3331597 | None:intergenic | 15.0% |
| !!! | AAATAAATGTTTTTAACTTG+AGG | - | chr3.4:3333214-3333233 | MS.gene009397:intron | 15.0% |
| !!! | AAGATATTTTTTAGTCTTTT+AGG | + | chr3.4:3334851-3334870 | None:intergenic | 15.0% |
| !!! | AGATATTTTTTAGTCTTTTA+GGG | + | chr3.4:3334850-3334869 | None:intergenic | 15.0% |
| !!! | ATTTTTAATATTTTACTTGC+GGG | - | chr3.4:3336668-3336687 | MS.gene009397:intron | 15.0% |
| !!! | TAATCAAATTCATTATTTTC+TGG | - | chr3.4:3334737-3334756 | MS.gene009397:intron | 15.0% |
| !!! | TTATTTGAAAATGAACTTTT+CGG | - | chr3.4:3334713-3334732 | MS.gene009397:intron | 15.0% |
| !!! | TTGACAAATTTTAAAGAAAA+TGG | + | chr3.4:3336552-3336571 | None:intergenic | 15.0% |
| !!! | TTTTCTTTAAAATTTGTCAA+TGG | - | chr3.4:3336552-3336571 | MS.gene009397:intron | 15.0% |
| !! | AAAAACATCTTTCAATACTT+AGG | + | chr3.4:3335492-3335511 | None:intergenic | 20.0% |
| !! | AAAATGAAACAGATAATGAA+AGG | + | chr3.4:3332628-3332647 | None:intergenic | 20.0% |
| !! | AACTTTCAATGAATGAAATT+AGG | - | chr3.4:3331110-3331129 | MS.gene009397:CDS | 20.0% |
| !! | ACTGTTAAAAATGATGTAAT+CGG | - | chr3.4:3331369-3331388 | MS.gene009397:intron | 20.0% |
| !! | ATCTCCAAAATTAAACATAA+TGG | + | chr3.4:3335100-3335119 | None:intergenic | 20.0% |
| !! | ATGAACAAAGAATGAAAATT+AGG | + | chr3.4:3330892-3330911 | None:intergenic | 20.0% |
| !! | ATTGTGATATTATTTAGTTG+GGG | - | chr3.4:3333348-3333367 | MS.gene009397:intron | 20.0% |
| !! | CATATAAATATTCTTTCTAC+TGG | - | chr3.4:3335338-3335357 | MS.gene009397:intron | 20.0% |
| !! | CATTGTATTAAAATGAAGAA+CGG | + | chr3.4:3332808-3332827 | None:intergenic | 20.0% |
| !! | CTTAACTATTGAAAAAGTTT+AGG | + | chr3.4:3331579-3331598 | None:intergenic | 20.0% |
| !! | GGCTAAAATTATATATTGAT+GGG | - | chr3.4:3332759-3332778 | MS.gene009397:intron | 20.0% |
| !! | TAAAGATATACTTAGTTTCA+TGG | + | chr3.4:3332333-3332352 | None:intergenic | 20.0% |
| !! | TCATTATTTGTTTGACATTA+TGG | - | chr3.4:3336147-3336166 | MS.gene009397:intron | 20.0% |
| !! | TTCAATTTCCATAATTCTAT+TGG | - | chr3.4:3336107-3336126 | MS.gene009397:intron | 20.0% |
| !! | TTCATAAAACATAAAAGAGT+AGG | - | chr3.4:3332392-3332411 | MS.gene009397:intron | 20.0% |
| !!! | AAAAATACAGTCTAAAGTAA+AGG | + | chr3.4:3332259-3332278 | None:intergenic | 20.0% |
| !!! | AAATTAAACATAATGGAAGA+CGG | + | chr3.4:3335093-3335112 | None:intergenic | 20.0% |
| !!! | AATTTTAAAGAAAATGGAAG+AGG | + | chr3.4:3336546-3336565 | None:intergenic | 20.0% |
| !!! | AATTTTGTAGTTTTGAGAAT+TGG | - | chr3.4:3331148-3331167 | MS.gene009397:CDS | 20.0% |
| !!! | ATTGTTTAATTTAATACACG+AGG | + | chr3.4:3335157-3335176 | None:intergenic | 20.0% |
| !!! | ATTTAGGGTTTTCAATTTTT+AGG | - | chr3.4:3330934-3330953 | MS.gene009397:intron | 20.0% |
| !!! | CTAAACTTTTTCAATAGTTA+AGG | - | chr3.4:3331577-3331596 | MS.gene009397:intron | 20.0% |
| !!! | GTATTTTGTTTCAAAGAAAT+GGG | - | chr3.4:3334116-3334135 | MS.gene009397:intron | 20.0% |
| !!! | GTTTTTTTTATGAGTTTCAA+GGG | - | chr3.4:3331250-3331269 | MS.gene009397:intron | 20.0% |
| !!! | TCTTCCATTATGTTTAATTT+TGG | - | chr3.4:3335093-3335112 | MS.gene009397:intron | 20.0% |
| !!! | TGATTACTTTTTTATCGTAA+AGG | - | chr3.4:3336186-3336205 | MS.gene009397:intron | 20.0% |
| !!! | TGTTTTTTTTATGAGTTTCA+AGG | - | chr3.4:3331249-3331268 | MS.gene009397:intron | 20.0% |
| !!! | TTTAGGGTTTTCAATTTTTA+GGG | - | chr3.4:3330935-3330954 | MS.gene009397:intron | 20.0% |
| !!! | TTTCAGAATACTTGTTTTAT+GGG | - | chr3.4:3332737-3332756 | MS.gene009397:intron | 20.0% |
| !!! | TTTTTAATATTTTACTTGCG+GGG | - | chr3.4:3336669-3336688 | MS.gene009397:intron | 20.0% |
| !!! | TTTTTTTTATGAGTTTCAAG+GGG | - | chr3.4:3331251-3331270 | MS.gene009397:intron | 20.0% |
| ! | AAAAAACTAAAGCTAAAGCA+TGG | + | chr3.4:3334253-3334272 | None:intergenic | 25.0% |
| ! | AAAAACTAAAGCTAAAGCAT+GGG | + | chr3.4:3334252-3334271 | None:intergenic | 25.0% |
| ! | AAAACTTCAAGTATGAAAAC+AGG | + | chr3.4:3333296-3333315 | None:intergenic | 25.0% |
| ! | AAACTATCCAAAACATTAAG+AGG | - | chr3.4:3334158-3334177 | MS.gene009397:intron | 25.0% |
| ! | AACTGCAGTAAAATTGATAA+TGG | + | chr3.4:3334508-3334527 | None:intergenic | 25.0% |
| ! | AATATAGCTACTATTGAACT+TGG | - | chr3.4:3333555-3333574 | MS.gene009397:intron | 25.0% |
| ! | AATGAAATTAACATGACTGA+TGG | - | chr3.4:3331293-3331312 | MS.gene009397:CDS | 25.0% |
| ! | ACATAATACTCATAATCGTT+AGG | + | chr3.4:3330848-3330867 | None:intergenic | 25.0% |
| ! | ATACAAAAAGAACAGTTCAA+TGG | + | chr3.4:3335904-3335923 | None:intergenic | 25.0% |
| ! | ATCAGTGCCTAATATATATT+GGG | - | chr3.4:3331764-3331783 | MS.gene009397:CDS | 25.0% |
| ! | ATGAAATTAACATGACTGAT+GGG | - | chr3.4:3331294-3331313 | MS.gene009397:CDS | 25.0% |
| ! | ATGTAAATCATCTTCAAACA+AGG | + | chr3.4:3333787-3333806 | None:intergenic | 25.0% |
| ! | ATTACTATATGTCTGAAAAC+AGG | - | chr3.4:3335638-3335657 | MS.gene009397:intron | 25.0% |
| ! | CATGTAGGAAAAAAACTTAA+AGG | + | chr3.4:3333150-3333169 | None:intergenic | 25.0% |
| ! | CTCTATCATCATATTTACTT+TGG | - | chr3.4:3335277-3335296 | MS.gene009397:intron | 25.0% |
| ! | CTTGTTTATTGATGAAGTAA+TGG | - | chr3.4:3335189-3335208 | MS.gene009397:intron | 25.0% |
| ! | GAATGAAATTAGGATTGTTT+GGG | - | chr3.4:3331120-3331139 | MS.gene009397:CDS | 25.0% |
| ! | GGGCTAAAATTATATATTGA+TGG | - | chr3.4:3332758-3332777 | MS.gene009397:intron | 25.0% |
| ! | GTCATATGACATTAAAACTT+TGG | - | chr3.4:3332709-3332728 | MS.gene009397:intron | 25.0% |
| ! | TACAAAAAGAACAGTTCAAT+GGG | + | chr3.4:3335903-3335922 | None:intergenic | 25.0% |
| ! | TACTGTAACCAATAGAATTA+TGG | + | chr3.4:3336118-3336137 | None:intergenic | 25.0% |
| ! | TAGGTTTCCCAATATATATT+AGG | + | chr3.4:3331774-3331793 | None:intergenic | 25.0% |
| ! | TATCAGTGCCTAATATATAT+TGG | - | chr3.4:3331763-3331782 | MS.gene009397:CDS | 25.0% |
| ! | TGAATGAAATTAGGATTGTT+TGG | - | chr3.4:3331119-3331138 | MS.gene009397:CDS | 25.0% |
| ! | TGAGGAAAAACAAAAGATAA+GGG | + | chr3.4:3333843-3333862 | None:intergenic | 25.0% |
| ! | TGTAAGTTATCCTGAAAAAT+AGG | - | chr3.4:3336301-3336320 | MS.gene009397:intron | 25.0% |
| ! | TTAATTTCATTTCTGTTTCG+TGG | + | chr3.4:3331284-3331303 | None:intergenic | 25.0% |
| ! | TTACATTTGATTGATGTCTT+TGG | - | chr3.4:3333801-3333820 | MS.gene009397:intron | 25.0% |
| ! | TTATATGTATATGTGTGTGT+GGG | + | chr3.4:3335325-3335344 | None:intergenic | 25.0% |
| ! | TTTATATGTATATGTGTGTG+TGG | + | chr3.4:3335326-3335345 | None:intergenic | 25.0% |
| !! | AAAACTACCTCTTAATGTTT+TGG | + | chr3.4:3334168-3334187 | None:intergenic | 25.0% |
| !! | CAATATATCTTCAGCTTTAA+TGG | + | chr3.4:3336833-3336852 | None:intergenic | 25.0% |
| !! | CATTTTGCAGTTTTTCTAAT+TGG | - | chr3.4:3333865-3333884 | MS.gene009397:CDS | 25.0% |
| !! | CTAAAAGATGCTAATTGTTT+TGG | - | chr3.4:3332082-3332101 | MS.gene009397:intron | 25.0% |
| !! | TAATTGAATAACTTGTCAGT+TGG | - | chr3.4:3333263-3333282 | MS.gene009397:intron | 25.0% |
| !! | TATTGAAAAAGTTTAGGGTT+GGG | + | chr3.4:3331573-3331592 | None:intergenic | 25.0% |
| !! | TGGTTCTATTATCTTACTTT+AGG | - | chr3.4:3334022-3334041 | MS.gene009397:CDS | 25.0% |
| !!! | AAAACAAGTATTCTGAAACT+TGG | + | chr3.4:3332735-3332754 | None:intergenic | 25.0% |
| !!! | ATGTTTATTTGCTGTATGTA+GGG | - | chr3.4:3332056-3332075 | MS.gene009397:intron | 25.0% |
| !!! | ATTTCCACTGTTGATTTTAT+AGG | - | chr3.4:3333473-3333492 | MS.gene009397:intron | 25.0% |
| !!! | ATTTTTTAGTCTTTTAGGGA+GGG | + | chr3.4:3334846-3334865 | None:intergenic | 25.0% |
| !!! | GGTATTTTGTTTCAAAGAAA+TGG | - | chr3.4:3334115-3334134 | MS.gene009397:intron | 25.0% |
| !!! | GTAAAGTTCATTTGAGATTT+TGG | - | chr3.4:3336600-3336619 | MS.gene009397:intron | 25.0% |
| !!! | GTTTCAGAATACTTGTTTTA+TGG | - | chr3.4:3332736-3332755 | MS.gene009397:intron | 25.0% |
| !!! | GTTTTCAATTTTTAGGGTTA+GGG | - | chr3.4:3330941-3330960 | MS.gene009397:intron | 25.0% |
| !!! | TATGTTTATTTGCTGTATGT+AGG | - | chr3.4:3332055-3332074 | MS.gene009397:intron | 25.0% |
| !!! | TATTTAGGAGTGTTTACTTT+AGG | - | chr3.4:3335984-3336003 | MS.gene009397:intron | 25.0% |
| !!! | TATTTTTTAGTCTTTTAGGG+AGG | + | chr3.4:3334847-3334866 | None:intergenic | 25.0% |
| !!! | TTCAGAATACTTGTTTTATG+GGG | - | chr3.4:3332738-3332757 | MS.gene009397:intron | 25.0% |
| !!! | TTGTTTTGAGTCATTAATGA+TGG | - | chr3.4:3336043-3336062 | MS.gene009397:intron | 25.0% |
| !!! | TTTCCACTGTTGATTTTATA+GGG | - | chr3.4:3333474-3333493 | MS.gene009397:intron | 25.0% |
| !!! | TTTTTAGTGAAATGAGTTTC+AGG | - | chr3.4:3335507-3335526 | MS.gene009397:intron | 25.0% |
| !!! | TTTTTTTTTTGGCAGTCAAT+AGG | - | chr3.4:3332120-3332139 | MS.gene009397:intron | 25.0% |
| AAACAAAATACCAGATTCTG+TGG | + | chr3.4:3334107-3334126 | None:intergenic | 30.0% | |
| AAACAGTCATTGTATTCTGA+TGG | + | chr3.4:3333618-3333637 | None:intergenic | 30.0% | |
| AACAAAATACCAGATTCTGT+GGG | + | chr3.4:3334106-3334125 | None:intergenic | 30.0% | |
| AACACTTGGAGTTAATAGAA+GGG | - | chr3.4:3334760-3334779 | MS.gene009397:intron | 30.0% | |
| AAGACTCAGCCATTTAAATT+TGG | + | chr3.4:3335462-3335481 | None:intergenic | 30.0% | |
| AAGTAACCAGATATATTGGA+AGG | + | chr3.4:3332033-3332052 | None:intergenic | 30.0% | |
| AAGTATAGAAAACTGCAACA+TGG | + | chr3.4:3334645-3334664 | None:intergenic | 30.0% | |
| AATACAGTACAGTTTGAGAA+AGG | + | chr3.4:3333433-3333452 | None:intergenic | 30.0% | |
| AATCGTTATATGCAATACCA+AGG | + | chr3.4:3334313-3334332 | None:intergenic | 30.0% | |
| ACAAAACATAGAACAGAAAC+AGG | + | chr3.4:3335755-3335774 | None:intergenic | 30.0% | |
| AGCCATTTAAATTTGGAAGA+CGG | + | chr3.4:3335455-3335474 | None:intergenic | 30.0% | |
| ATCGTTATATGCAATACCAA+GGG | + | chr3.4:3334312-3334331 | None:intergenic | 30.0% | |
| ATTGTATTCTGATGGAAATG+GGG | + | chr3.4:3333610-3333629 | None:intergenic | 30.0% | |
| CACCAATAATGTCATTCAAA+AGG | + | chr3.4:3334814-3334833 | None:intergenic | 30.0% | |
| CATTGTATTCTGATGGAAAT+GGG | + | chr3.4:3333611-3333630 | None:intergenic | 30.0% | |
| CTGAGGAAAAACAAAAGATA+AGG | + | chr3.4:3333844-3333863 | None:intergenic | 30.0% | |
| CTTGTGATCAAGAAATAACT+TGG | + | chr3.4:3335712-3335731 | None:intergenic | 30.0% | |
| GTAATCTTTAGGTACTTTCA+GGG | - | chr3.4:3331519-3331538 | MS.gene009397:intron | 30.0% | |
| GTATTGCATATAACGATTGT+GGG | - | chr3.4:3334315-3334334 | MS.gene009397:intron | 30.0% | |
| GTGTTTGGATATCTAATGAT+GGG | + | chr3.4:3334226-3334245 | None:intergenic | 30.0% | |
| GTTGTTAACTTAGACTTTGA+TGG | + | chr3.4:3331328-3331347 | None:intergenic | 30.0% | |
| TAAATATTCTTTCTACTGGG+AGG | - | chr3.4:3335342-3335361 | MS.gene009397:CDS | 30.0% | |
| TAACTCAAACAAACATGAAG+AGG | + | chr3.4:3336327-3336346 | None:intergenic | 30.0% | |
| TAAGGGAAACATTTCTATCA+AGG | - | chr3.4:3336516-3336535 | MS.gene009397:intron | 30.0% | |
| TAGCAAGTAACCAGATATAT+TGG | + | chr3.4:3332037-3332056 | None:intergenic | 30.0% | |
| TAGTAATACAGCATGATAAC+TGG | + | chr3.4:3335954-3335973 | None:intergenic | 30.0% | |
| TATATATTGGGAAACCTAAC+TGG | - | chr3.4:3331776-3331795 | MS.gene009397:CDS | 30.0% | |
| TCAAAATAAAGGGATGTGAA+GGG | + | chr3.4:3333738-3333757 | None:intergenic | 30.0% | |
| TCATTGTATTCTGATGGAAA+TGG | + | chr3.4:3333612-3333631 | None:intergenic | 30.0% | |
| TCTAAGTTAACAACATCCAA+AGG | - | chr3.4:3331334-3331353 | MS.gene009397:CDS | 30.0% | |
| TGTGTTTGGATATCTAATGA+TGG | + | chr3.4:3334227-3334246 | None:intergenic | 30.0% | |
| TTCAAAATAAAGGGATGTGA+AGG | + | chr3.4:3333739-3333758 | None:intergenic | 30.0% | |
| TTCATAATGGTGTGAAACAT+TGG | - | chr3.4:3336368-3336387 | MS.gene009397:intron | 30.0% | |
| ! | AAAACGCACTTTAGATTTTC+CGG | - | chr3.4:3332560-3332579 | MS.gene009397:CDS | 30.0% |
| ! | AGACATTCTGAAAAAGCATA+AGG | - | chr3.4:3336498-3336517 | MS.gene009397:intron | 30.0% |
| ! | CTATTGAAAAAGTTTAGGGT+TGG | + | chr3.4:3331574-3331593 | None:intergenic | 30.0% |
| ! | CTTTCTTTTTGTCAATGCTA+TGG | - | chr3.4:3336765-3336784 | MS.gene009397:CDS | 30.0% |
| ! | GACATTCTGAAAAAGCATAA+GGG | - | chr3.4:3336499-3336518 | MS.gene009397:intron | 30.0% |
| ! | GTTATTGGGATTTTCTTATG+TGG | - | chr3.4:3331705-3331724 | MS.gene009397:intron | 30.0% |
| ! | TGAACAAGGTTTTCTTTCTA+AGG | + | chr3.4:3332308-3332327 | None:intergenic | 30.0% |
| ! | TTAGTTTCATGGATTGAACA+AGG | + | chr3.4:3332322-3332341 | None:intergenic | 30.0% |
| !! | AAACAGTATGAGCTTGTTAT+TGG | - | chr3.4:3331690-3331709 | MS.gene009397:intron | 30.0% |
| !! | AACAGTATGAGCTTGTTATT+GGG | - | chr3.4:3331691-3331710 | MS.gene009397:intron | 30.0% |
| !! | GAAAATCTAAAGTGCGTTTT+TGG | + | chr3.4:3332560-3332579 | None:intergenic | 30.0% |
| !!! | AATTGAAGGTTTTGTTTTGC+AGG | - | chr3.4:3336789-3336808 | MS.gene009397:CDS | 30.0% |
| !!! | ACAGCCACTTTTCAAAATAA+AGG | + | chr3.4:3333749-3333768 | None:intergenic | 30.0% |
| !!! | CACATTTTTTCTGCATAAAC+AGG | + | chr3.4:3334930-3334949 | None:intergenic | 30.0% |
| !!! | CAGCCACTTTTCAAAATAAA+GGG | + | chr3.4:3333748-3333767 | None:intergenic | 30.0% |
| !!! | CATCCCTTTATTTTGAAAAG+TGG | - | chr3.4:3333742-3333761 | MS.gene009397:intron | 30.0% |
| !!! | GGTTTTCAATTTTTAGGGTT+AGG | - | chr3.4:3330940-3330959 | MS.gene009397:intron | 30.0% |
| !!! | GTGTTTGATTTTGAGTTTTG+TGG | - | chr3.4:3330989-3331008 | MS.gene009397:intron | 30.0% |
| !!! | TCATTATTTTCTGGAACACT+TGG | - | chr3.4:3334746-3334765 | MS.gene009397:intron | 30.0% |
| !!! | TCTAACCTTTTTGAGTCATT+GGG | - | chr3.4:3331546-3331565 | MS.gene009397:intron | 30.0% |
| !!! | TGTGATGTATGTGGTTTTTT+AGG | - | chr3.4:3335380-3335399 | MS.gene009397:CDS | 30.0% |
| !!! | TTTTTTCTGCATAAACAGGT+AGG | + | chr3.4:3334926-3334945 | None:intergenic | 30.0% |
| AAAATAAAGGGATGTGAAGG+GGG | + | chr3.4:3333736-3333755 | None:intergenic | 35.0% | |
| AACTGAGTGTTCTCAAAACT+CGG | + | chr3.4:3335545-3335564 | None:intergenic | 35.0% | |
| ACAACATCCAAAGGAAAAGA+AGG | - | chr3.4:3331343-3331362 | MS.gene009397:intron | 35.0% | |
| ACATAAAAGAGTAGGTGTCT+TGG | - | chr3.4:3332400-3332419 | MS.gene009397:intron | 35.0% | |
| ACATTGAACCAACATAGTGT+TGG | - | chr3.4:3331913-3331932 | MS.gene009397:intron | 35.0% | |
| ACCCGTCTTCCAAATTTAAA+TGG | - | chr3.4:3335450-3335469 | MS.gene009397:intron | 35.0% | |
| AGCATATGAACTTTCGAAGA+AGG | - | chr3.4:3336393-3336412 | MS.gene009397:intron | 35.0% | |
| ATATGAACTTTCGAAGAAGG+AGG | - | chr3.4:3336396-3336415 | MS.gene009397:intron | 35.0% | |
| CAAAATAAAGGGATGTGAAG+GGG | + | chr3.4:3333737-3333756 | None:intergenic | 35.0% | |
| CAACAAAATATGAGCATGAC+AGG | + | chr3.4:3334577-3334596 | None:intergenic | 35.0% | |
| CAGATATATTGGAAGGAGTT+AGG | + | chr3.4:3332026-3332045 | None:intergenic | 35.0% | |
| CGTAAAGGAAAAACATTCTG+AGG | - | chr3.4:3336201-3336220 | MS.gene009397:intron | 35.0% | |
| CGTAATCTTTAGGTACTTTC+AGG | - | chr3.4:3331518-3331537 | MS.gene009397:intron | 35.0% | |
| CTAACTCCTTCCAATATATC+TGG | - | chr3.4:3332024-3332043 | MS.gene009397:intron | 35.0% | |
| GAAAAACTGCAAAATGTCTG+AGG | + | chr3.4:3333861-3333880 | None:intergenic | 35.0% | |
| GAACACTTGGAGTTAATAGA+AGG | - | chr3.4:3334759-3334778 | MS.gene009397:intron | 35.0% | |
| GACTAGTGAGTCATATGAAA+TGG | - | chr3.4:3334788-3334807 | MS.gene009397:intron | 35.0% | |
| GCAAGAAGAACAAGGTTTAT+GGG | - | chr3.4:3335667-3335686 | MS.gene009397:intron | 35.0% | |
| GCCATTTAAATTTGGAAGAC+GGG | + | chr3.4:3335454-3335473 | None:intergenic | 35.0% | |
| GGTATTGCATATAACGATTG+TGG | - | chr3.4:3334314-3334333 | MS.gene009397:intron | 35.0% | |
| GGTTCATACACTCAGTATAA+TGG | + | chr3.4:3330871-3330890 | None:intergenic | 35.0% | |
| GTCAATGCTATGGTAATTGA+AGG | - | chr3.4:3336775-3336794 | MS.gene009397:CDS | 35.0% | |
| GTGAATTCATGAGTTGCTAA+AGG | + | chr3.4:3332368-3332387 | None:intergenic | 35.0% | |
| TAACAGAACCAACACTATGT+TGG | + | chr3.4:3331924-3331943 | None:intergenic | 35.0% | |
| TAAGGCAGTACACTTGTATA+TGG | - | chr3.4:3334454-3334473 | MS.gene009397:intron | 35.0% | |
| TATGAACTTTCGAAGAAGGA+GGG | - | chr3.4:3336397-3336416 | MS.gene009397:intron | 35.0% | |
| TCAATCATATAGGGACCATA+AGG | + | chr3.4:3334536-3334555 | None:intergenic | 35.0% | |
| TCCTGTATTGAATCAGTTCT+AGG | + | chr3.4:3336870-3336889 | None:intergenic | 35.0% | |
| TCGAAAAATATCCAACCATG+TGG | + | chr3.4:3335800-3335819 | None:intergenic | 35.0% | |
| TCTTTCTACTGTGATGTATG+TGG | - | chr3.4:3335371-3335390 | MS.gene009397:CDS | 35.0% | |
| TGAAACAGATAATGAAAGGC+AGG | + | chr3.4:3332624-3332643 | None:intergenic | 35.0% | |
| TGATAAAGTCGAAGGATACA+TGG | + | chr3.4:3331748-3331767 | None:intergenic | 35.0% | |
| TGGTACATTGTCAATGTTTG+AGG | - | chr3.4:3334987-3335006 | MS.gene009397:intron | 35.0% | |
| TTAGGCTATGTTTGCTTTGA+AGG | - | chr3.4:3334040-3334059 | MS.gene009397:CDS | 35.0% | |
| TTATGTGGTAACCATGCTAT+TGG | - | chr3.4:3331720-3331739 | MS.gene009397:intron | 35.0% | |
| TTCTGTATATCTCATCACCA+GGG | + | chr3.4:3334966-3334985 | None:intergenic | 35.0% | |
| TTGTGTGAATGTGATGAAAG+AGG | - | chr3.4:3335771-3335790 | MS.gene009397:intron | 35.0% | |
| TTTGTGGTTTGAGAGTTTGT+TGG | - | chr3.4:3331005-3331024 | MS.gene009397:intron | 35.0% | |
| ! | AAACGCACTTTAGATTTTCC+GGG | - | chr3.4:3332561-3332580 | MS.gene009397:CDS | 35.0% |
| ! | ACATTTTACATCCTCGCTTA+TGG | + | chr3.4:3331609-3331628 | None:intergenic | 35.0% |
| ! | AGCTGTACTTGTAATTTTCC+AGG | - | chr3.4:3332894-3332913 | MS.gene009397:intron | 35.0% |
| ! | ATTTTCCATAGCCTTTCCTT+TGG | + | chr3.4:3336267-3336286 | None:intergenic | 35.0% |
| ! | CATTTTACATCCTCGCTTAT+GGG | + | chr3.4:3331608-3331627 | None:intergenic | 35.0% |
| ! | CTGTACTTGTAATTTTCCAG+GGG | - | chr3.4:3332896-3332915 | MS.gene009397:intron | 35.0% |
| ! | GAACTGATTCAATACAGGAA+AGG | - | chr3.4:3336871-3336890 | MS.gene009397:CDS | 35.0% |
| ! | GCTGTACTTGTAATTTTCCA+GGG | - | chr3.4:3332895-3332914 | MS.gene009397:intron | 35.0% |
| ! | GGCCTTTTGAATGACATTAT+TGG | - | chr3.4:3334809-3334828 | MS.gene009397:intron | 35.0% |
| ! | TAACCAAGCTTTATCTGACT+AGG | + | chr3.4:3334407-3334426 | None:intergenic | 35.0% |
| ! | TATGTCTGAAAACAGGTTGA+TGG | - | chr3.4:3335645-3335664 | MS.gene009397:intron | 35.0% |
| ! | TGTACTTGTAATTTTCCAGG+GGG | - | chr3.4:3332897-3332916 | MS.gene009397:intron | 35.0% |
| ! | TTCTGAGGAATCCTACAATT+TGG | - | chr3.4:3336216-3336235 | MS.gene009397:intron | 35.0% |
| ! | TTTGGATATCTAATGATGGG+CGG | + | chr3.4:3334223-3334242 | None:intergenic | 35.0% |
| !! | AACACTATGTTGGTTCAATG+TGG | + | chr3.4:3331914-3331933 | None:intergenic | 35.0% |
| !! | CATGGTTGGATATTTTTCGA+AGG | - | chr3.4:3335800-3335819 | MS.gene009397:intron | 35.0% |
| !! | GAAAGTACCTAAAGATTACG+AGG | + | chr3.4:3331518-3331537 | None:intergenic | 35.0% |
| !! | TGGGCAGAATCTTTGTTATT+TGG | - | chr3.4:3335686-3335705 | MS.gene009397:intron | 35.0% |
| !! | TTATTTCTGTCTACTAGCCT+AGG | + | chr3.4:3333098-3333117 | None:intergenic | 35.0% |
| !!! | CTCTAACCTTTTTGAGTCAT+TGG | - | chr3.4:3331545-3331564 | MS.gene009397:intron | 35.0% |
| !!! | GTTTTTTTTCTTCTTCCCAC+TGG | - | chr3.4:3332668-3332687 | MS.gene009397:intron | 35.0% |
| !!! | TGTGGTTTTTTAGGTGCAAT+AGG | - | chr3.4:3335389-3335408 | MS.gene009397:CDS | 35.0% |
| !!! | TTTTTTTGGCAGTCAATAGG+AGG | - | chr3.4:3332123-3332142 | MS.gene009397:intron | 35.0% |
| AAACAGGTAGGCACAGAAAA+TGG | + | chr3.4:3334914-3334933 | None:intergenic | 40.0% | |
| ACAGGTCAACATCATAGTAG+AGG | + | chr3.4:3335737-3335756 | None:intergenic | 40.0% | |
| AGTTCAACTCATGCCCTTAA+AGG | + | chr3.4:3331476-3331495 | None:intergenic | 40.0% | |
| ATCATATAGGGACCATAAGG+AGG | + | chr3.4:3334533-3334552 | None:intergenic | 40.0% | |
| ATGGACAAGCTTGATAAAGC+TGG | + | chr3.4:3331409-3331428 | None:intergenic | 40.0% | |
| ATTGTTGAGTGCAAGAGAGT+CGG | - | chr3.4:3335577-3335596 | MS.gene009397:intron | 40.0% | |
| CAAGCTGCATTCAACTAGAT+TGG | - | chr3.4:3333998-3334017 | MS.gene009397:CDS | 40.0% | |
| CAATCTAGTTGAATGCAGCT+TGG | + | chr3.4:3334000-3334019 | None:intergenic | 40.0% | |
| CAGAATGTCTAAAAGAACCC+TGG | + | chr3.4:3336488-3336507 | None:intergenic | 40.0% | |
| CAGGTCAACATCATAGTAGA+GGG | + | chr3.4:3335736-3335755 | None:intergenic | 40.0% | |
| CTGCATTCAACTAGATTGGT+TGG | - | chr3.4:3334002-3334021 | MS.gene009397:CDS | 40.0% | |
| CTTCTGTATATCTCATCACC+AGG | + | chr3.4:3334967-3334986 | None:intergenic | 40.0% | |
| CTTGTGTGATGATACACCAA+TGG | - | chr3.4:3333971-3333990 | MS.gene009397:CDS | 40.0% | |
| CTTTGCGCTTCATGAAATTG+AGG | + | chr3.4:3333665-3333684 | None:intergenic | 40.0% | |
| GAAGATATGAGATCGAGACA+TGG | - | chr3.4:3333577-3333596 | MS.gene009397:intron | 40.0% | |
| GAGGATACATGCCAAATTGT+AGG | + | chr3.4:3336230-3336249 | None:intergenic | 40.0% | |
| GAGTAGGTGTCTTGGTTAAT+TGG | - | chr3.4:3332408-3332427 | MS.gene009397:intron | 40.0% | |
| GCAAGAACCTCGTAATCTTT+AGG | - | chr3.4:3331508-3331527 | MS.gene009397:intron | 40.0% | |
| GGCAAGAAGAACAAGGTTTA+TGG | - | chr3.4:3335666-3335685 | MS.gene009397:intron | 40.0% | |
| GGTGATGAGATATACAGAAG+TGG | - | chr3.4:3334967-3334986 | MS.gene009397:intron | 40.0% | |
| GTGAAACCAGTGTACTCTAT+GGG | - | chr3.4:3333399-3333418 | MS.gene009397:intron | 40.0% | |
| GTTCAACTCATGCCCTTAAA+GGG | + | chr3.4:3331475-3331494 | None:intergenic | 40.0% | |
| TCATGAGTTGCTAAAGGAAC+TGG | + | chr3.4:3332362-3332381 | None:intergenic | 40.0% | |
| TCCTACATGTGCTTAAGTGT+GGG | - | chr3.4:3333161-3333180 | MS.gene009397:intron | 40.0% | |
| TCTGTATATCTCATCACCAG+GGG | + | chr3.4:3334965-3334984 | None:intergenic | 40.0% | |
| TGAATTTCTCCCACAGAATC+TGG | - | chr3.4:3334094-3334113 | MS.gene009397:intron | 40.0% | |
| TGATAGAGACGATGAGCATT+TGG | + | chr3.4:3335265-3335284 | None:intergenic | 40.0% | |
| TGATGAGAAAGTGGAAGAGA+AGG | - | chr3.4:3332202-3332221 | MS.gene009397:intron | 40.0% | |
| TGCTAAGCTACAGAGGATAT+TGG | - | chr3.4:3336461-3336480 | MS.gene009397:intron | 40.0% | |
| TGCTCATTTGCAAAAGCAGT+AGG | - | chr3.4:3332472-3332491 | MS.gene009397:intron | 40.0% | |
| TGGCCCTATAAAATCAACAG+TGG | + | chr3.4:3333480-3333499 | None:intergenic | 40.0% | |
| TGTGAAACCAGTGTACTCTA+TGG | - | chr3.4:3333398-3333417 | MS.gene009397:intron | 40.0% | |
| TTCCTACATGTGCTTAAGTG+TGG | - | chr3.4:3333160-3333179 | MS.gene009397:intron | 40.0% | |
| TTTGAGAACACTCAGTTGTC+TGG | - | chr3.4:3335548-3335567 | MS.gene009397:intron | 40.0% | |
| ! | AACGCACTTTAGATTTTCCG+GGG | - | chr3.4:3332562-3332581 | MS.gene009397:CDS | 40.0% |
| ! | AGATGGCGATCCAAAACTTT+TGG | + | chr3.4:3336919-3336938 | None:intergenic | 40.0% |
| ! | AGTTGACTCACACCCTTTAA+GGG | - | chr3.4:3331460-3331479 | MS.gene009397:intron | 40.0% |
| ! | CAGTCTTCCTTCTTTTCCTT+TGG | + | chr3.4:3331353-3331372 | None:intergenic | 40.0% |
| ! | CATATTTTGTCAGCAACCCT+TGG | - | chr3.4:3334293-3334312 | MS.gene009397:intron | 40.0% |
| ! | GCCTAGAACTGATTCAATAC+AGG | - | chr3.4:3336866-3336885 | MS.gene009397:CDS | 40.0% |
| ! | TGCTAGTTTACGAGAACATG+AGG | - | chr3.4:3333515-3333534 | MS.gene009397:intron | 40.0% |
| ! | TGGAGTTAATAGAAGGGTAC+TGG | - | chr3.4:3334766-3334785 | MS.gene009397:intron | 40.0% |
| ! | TTGTGCGGATCCAAAAGTTT+TGG | - | chr3.4:3336906-3336925 | MS.gene009397:CDS | 40.0% |
| ! | TTTTTCTTCTTCCCACTGGA+TGG | - | chr3.4:3332672-3332691 | MS.gene009397:intron | 40.0% |
| !! | ACACAGTCTTTGAAGTAGCA+GGG | - | chr3.4:3335928-3335947 | MS.gene009397:intron | 40.0% |
| !! | ATATCTAATGATGGGCGGAA+TGG | + | chr3.4:3334218-3334237 | None:intergenic | 40.0% |
| !! | CATGAAGAGGCCTATTTTTC+AGG | + | chr3.4:3336314-3336333 | None:intergenic | 40.0% |
| !! | GAAAAGTTGGTACACCTGAA+AGG | - | chr3.4:3336419-3336438 | MS.gene009397:intron | 40.0% |
| !! | GCTATGTTTGCTTTGAAGGA+TGG | - | chr3.4:3334044-3334063 | MS.gene009397:CDS | 40.0% |
| !! | TACACAGTCTTTGAAGTAGC+AGG | - | chr3.4:3335927-3335946 | MS.gene009397:intron | 40.0% |
| !! | TTAGGCACTGATAAAGTCGA+AGG | + | chr3.4:3331756-3331775 | None:intergenic | 40.0% |
| !! | TTTTAGTCTTTTAGGGAGGG+TGG | + | chr3.4:3334843-3334862 | None:intergenic | 40.0% |
| AAACCAGAGACCTTACTAGG+GGG | - | chr3.4:3331833-3331852 | MS.gene009397:CDS | 45.0% | |
| AAATCACCGTTAACCGATGG+CGG | - | chr3.4:3330656-3330675 | MS.gene009397:CDS | 45.0% | |
| AATGAGCAGTGCTTGCTCTT+TGG | - | chr3.4:3332824-3332843 | MS.gene009397:intron | 45.0% | |
| ACCCACACTTAAGCACATGT+AGG | + | chr3.4:3333165-3333184 | None:intergenic | 45.0% | |
| AGACGATGAGCATTTGGAGA+AGG | + | chr3.4:3335259-3335278 | None:intergenic | 45.0% | |
| AGAGAACACCCTACTGAAAG+TGG | + | chr3.4:3331802-3331821 | None:intergenic | 45.0% | |
| AGCCTTTCCTTTGGTAAGGT+GGG | + | chr3.4:3336258-3336277 | None:intergenic | 45.0% | |
| AGTACGAATTGGTGAAGCGA+CGG | - | chr3.4:3330711-3330730 | MS.gene009397:CDS | 45.0% | |
| ATCGAACGAAGGAGAGTTCA+TGG | - | chr3.4:3330815-3330834 | MS.gene009397:intron | 45.0% | |
| CAAACCAGAGACCTTACTAG+GGG | - | chr3.4:3331832-3331851 | MS.gene009397:CDS | 45.0% | |
| CAATAGGAGGCTTGATGAGT+GGG | - | chr3.4:3332136-3332155 | MS.gene009397:intron | 45.0% | |
| CCAAACCAGAGACCTTACTA+GGG | - | chr3.4:3331831-3331850 | MS.gene009397:CDS | 45.0% | |
| CCATAGCCTTTCCTTTGGTA+AGG | + | chr3.4:3336262-3336281 | None:intergenic | 45.0% | |
| CCTTACCAAAGGAAAGGCTA+TGG | - | chr3.4:3336259-3336278 | MS.gene009397:intron | 45.0% | |
| CGACCTAGTCAGATAAAGCT+TGG | - | chr3.4:3334401-3334420 | MS.gene009397:intron | 45.0% | |
| CTAAAGCATGGGCATGTGTT+TGG | + | chr3.4:3334241-3334260 | None:intergenic | 45.0% | |
| CTACAGAGGATATTGGACCA+GGG | - | chr3.4:3336468-3336487 | MS.gene009397:intron | 45.0% | |
| CTGTATATCTCATCACCAGG+GGG | + | chr3.4:3334964-3334983 | None:intergenic | 45.0% | |
| CTGTCAAAGTCATCGAACGA+AGG | - | chr3.4:3330804-3330823 | MS.gene009397:intron | 45.0% | |
| CTTCGTTCGATGACTTTGAC+AGG | + | chr3.4:3330806-3330825 | None:intergenic | 45.0% | |
| GAAACTTGACCAGCTTGATC+TGG | - | chr3.4:3332160-3332179 | MS.gene009397:intron | 45.0% | |
| GATACATGGCACCAATAGCA+TGG | + | chr3.4:3331734-3331753 | None:intergenic | 45.0% | |
| GATACTTTCCATCCCTCCAA+CGG | + | chr3.4:3330781-3330800 | None:intergenic | 45.0% | |
| GATCGATGAGACACATGTTG+AGG | - | chr3.4:3333036-3333055 | MS.gene009397:intron | 45.0% | |
| GCAAAAGCAGTAGGCATAGA+AGG | - | chr3.4:3332481-3332500 | MS.gene009397:intron | 45.0% | |
| GCGGGGATATATGAGATGTT+TGG | - | chr3.4:3336686-3336705 | MS.gene009397:CDS | 45.0% | |
| GGCATAAACCAACCTCTGTT+GGG | + | chr3.4:3331434-3331453 | None:intergenic | 45.0% | |
| TAAGGTAGTTCCCATAAGCG+AGG | - | chr3.4:3331595-3331614 | MS.gene009397:intron | 45.0% | |
| TACTGCAGTTGTCCTCCTTA+TGG | - | chr3.4:3334518-3334537 | MS.gene009397:CDS | 45.0% | |
| TAGCAGTCCAAGGTCTGAAA+GGG | + | chr3.4:3336446-3336465 | None:intergenic | 45.0% | |
| TAGCCTTTCCTTTGGTAAGG+TGG | + | chr3.4:3336259-3336278 | None:intergenic | 45.0% | |
| TATCAGCCCATAGAGTACAC+TGG | + | chr3.4:3333408-3333427 | None:intergenic | 45.0% | |
| TCAATAGGAGGCTTGATGAG+TGG | - | chr3.4:3332135-3332154 | MS.gene009397:intron | 45.0% | |
| TCGAAGAAGGAGGGAAAAGT+TGG | - | chr3.4:3336406-3336425 | MS.gene009397:intron | 45.0% | |
| TCTCATCGATCTTCCTCTTC+TGG | + | chr3.4:3333027-3333046 | None:intergenic | 45.0% | |
| TGATGAAAGAGGATGCCACA+TGG | - | chr3.4:3335782-3335801 | MS.gene009397:intron | 45.0% | |
| TGGGTCCCAATGACTCAAAA+AGG | + | chr3.4:3331554-3331573 | None:intergenic | 45.0% | |
| TTAGCAGTCCAAGGTCTGAA+AGG | + | chr3.4:3336447-3336466 | None:intergenic | 45.0% | |
| TTTCCTTTGGTAAGGTGGGA+GGG | + | chr3.4:3336254-3336273 | None:intergenic | 45.0% | |
| TTTGGATCGCCATCTCAAAG+CGG | - | chr3.4:3336924-3336943 | MS.gene009397:CDS | 45.0% | |
| ! | ACGCACTTTAGATTTTCCGG+GGG | - | chr3.4:3332563-3332582 | MS.gene009397:CDS | 45.0% |
| ! | AGGACAGCATGTCATTTGTG+CGG | - | chr3.4:3336891-3336910 | MS.gene009397:CDS | 45.0% |
| ! | AGTAGGGTGTTCTCTCCTAT+AGG | - | chr3.4:3331807-3331826 | MS.gene009397:CDS | 45.0% |
| ! | CCTAGTAAGGTCTCTGGTTT+GGG | + | chr3.4:3331833-3331852 | None:intergenic | 45.0% |
| ! | CTAACTGGCCACTTTCAGTA+GGG | - | chr3.4:3331791-3331810 | MS.gene009397:CDS | 45.0% |
| ! | GACTAGGTCGATTAGCTACA+CGG | + | chr3.4:3334391-3334410 | None:intergenic | 45.0% |
| ! | GAGTTGACTCACACCCTTTA+AGG | - | chr3.4:3331459-3331478 | MS.gene009397:intron | 45.0% |
| ! | GGCAGTTGTTGATGAGAAAG+TGG | - | chr3.4:3332193-3332212 | MS.gene009397:intron | 45.0% |
| !! | AGAGGTTGGTTTATGCCGTA+AGG | - | chr3.4:3331437-3331456 | MS.gene009397:intron | 45.0% |
| !! | GGTTGATGGCAAGAAGAACA+AGG | - | chr3.4:3335659-3335678 | MS.gene009397:intron | 45.0% |
| !! | GTTTGCTTTGAAGGATGGAG+TGG | - | chr3.4:3334049-3334068 | MS.gene009397:CDS | 45.0% |
| !! | TAATGATGGGCGGAATGGAA+TGG | + | chr3.4:3334213-3334232 | None:intergenic | 45.0% |
| !! | AAAAAAATTAAAAAAAAATG+TGG | + | chr3.4:3331873-3331892 | None:intergenic | 5.0% |
| !! | ATTCAAAAAATTATAATTTA+TGG | + | chr3.4:3334079-3334098 | None:intergenic | 5.0% |
| !!! | TACTATAATTTTATTTATTT+AGG | - | chr3.4:3335969-3335988 | MS.gene009397:intron | 5.0% |
| AACCAACCTCTGTTGGGCAA+TGG | + | chr3.4:3331428-3331447 | None:intergenic | 50.0% | |
| AGAACACTCAGTTGTCTGGC+AGG | - | chr3.4:3335552-3335571 | MS.gene009397:intron | 50.0% | |
| AGCAGTCCAAGGTCTGAAAG+GGG | + | chr3.4:3336445-3336464 | None:intergenic | 50.0% | |
| AGGGATGTGAAGGGGGAAAA+AGG | + | chr3.4:3333729-3333748 | None:intergenic | 50.0% | |
| ATCTTCTGTGCTTCCGTTGG+AGG | - | chr3.4:3330736-3330755 | MS.gene009397:intron | 50.0% | |
| CATCGATCTTCCTCTTCTGG+TGG | + | chr3.4:3333024-3333043 | None:intergenic | 50.0% | |
| CCACAGATTCCAGATCAAGC+TGG | + | chr3.4:3332172-3332191 | None:intergenic | 50.0% | |
| CCCAAACCAGAGACCTTACT+AGG | - | chr3.4:3331830-3331849 | MS.gene009397:CDS | 50.0% | |
| CCCTAGTAAGGTCTCTGGTT+TGG | + | chr3.4:3331834-3331853 | None:intergenic | 50.0% | |
| CCTACTGAAAGTGGCCAGTT+AGG | + | chr3.4:3331793-3331812 | None:intergenic | 50.0% | |
| CGAAGGAGAGTTCATGGATG+TGG | - | chr3.4:3330821-3330840 | MS.gene009397:intron | 50.0% | |
| CGCTTCACCAATTCGTACTC+CGG | + | chr3.4:3330710-3330729 | None:intergenic | 50.0% | |
| CGGCATAAACCAACCTCTGT+TGG | + | chr3.4:3331435-3331454 | None:intergenic | 50.0% | |
| CTCCCACCTTACCAAAGGAA+AGG | - | chr3.4:3336253-3336272 | MS.gene009397:intron | 50.0% | |
| CTCTGTAGCTTAGCAGTCCA+AGG | + | chr3.4:3336456-3336475 | None:intergenic | 50.0% | |
| CTTGGACTGCTAAGCTACAG+AGG | - | chr3.4:3336454-3336473 | MS.gene009397:intron | 50.0% | |
| CTTTCCTTTGGTAAGGTGGG+AGG | + | chr3.4:3336255-3336274 | None:intergenic | 50.0% | |
| GAAAGAGGATGCCACATGGT+TGG | - | chr3.4:3335786-3335805 | MS.gene009397:intron | 50.0% | |
| GAACATAAACTGATGCCCCC+TGG | + | chr3.4:3332915-3332934 | None:intergenic | 50.0% | |
| GAATGCAGCTTGGTTGCCAT+TGG | + | chr3.4:3333990-3334009 | None:intergenic | 50.0% | |
| GAGATCTTCTGTGCTTCCGT+TGG | - | chr3.4:3330733-3330752 | MS.gene009397:CDS | 50.0% | |
| GCTACAGAGGATATTGGACC+AGG | - | chr3.4:3336467-3336486 | MS.gene009397:intron | 50.0% | |
| GGCAAATCACCGTTAACCGA+TGG | - | chr3.4:3330653-3330672 | MS.gene009397:CDS | 50.0% | |
| GGGTGTGAGTCAACTCCTTA+CGG | + | chr3.4:3331455-3331474 | None:intergenic | 50.0% | |
| TAGCAGCATCAAGCTCTTCG+TGG | + | chr3.4:3333500-3333519 | None:intergenic | 50.0% | |
| TGTGATCTTAAGCATCCCCC+TGG | - | chr3.4:3334946-3334965 | MS.gene009397:intron | 50.0% | |
| ! | AGAGCAGCTTCAGAGGCATA+TGG | - | chr3.4:3333683-3333702 | MS.gene009397:intron | 50.0% |
| ! | AGATTTTCCGGGGGAAGTAG+AGG | - | chr3.4:3332572-3332591 | MS.gene009397:CDS | 50.0% |
| ! | ATGAGTTGAACTCCCGCTAG+TGG | - | chr3.4:3331484-3331503 | MS.gene009397:intron | 50.0% |
| ! | CCAGCTTGATCTGGAATCTG+TGG | - | chr3.4:3332169-3332188 | MS.gene009397:intron | 50.0% |
| ! | CCTAACTGGCCACTTTCAGT+AGG | - | chr3.4:3331790-3331809 | MS.gene009397:CDS | 50.0% |
| ! | CTTCAGAGGCATATGGTGAG+TGG | - | chr3.4:3333690-3333709 | MS.gene009397:intron | 50.0% |
| ! | GCTTGATCTGGAATCTGTGG+AGG | - | chr3.4:3332172-3332191 | MS.gene009397:intron | 50.0% |
| ! | TAACGGTGATTTGCCGTGAC+CGG | + | chr3.4:3330648-3330667 | None:intergenic | 50.0% |
| ! | TACTCCGGTACCGAATCTGA+CGG | + | chr3.4:3330695-3330714 | None:intergenic | 50.0% |
| ! | TTCGGTACCGGAGTACGAAT+TGG | - | chr3.4:3330700-3330719 | MS.gene009397:CDS | 50.0% |
| !!! | GTAATTTTCCAGGGGGCATC+AGG | - | chr3.4:3332904-3332923 | MS.gene009397:intron | 50.0% |
| ACAGAGCTGACACCATCCAG+TGG | + | chr3.4:3332687-3332706 | None:intergenic | 55.0% | |
| AGATGACACGCCACCAGAAG+AGG | - | chr3.4:3333011-3333030 | MS.gene009397:intron | 55.0% | |
| AGCGCAAAGAGCAGCTTCAG+AGG | - | chr3.4:3333676-3333695 | MS.gene009397:intron | 55.0% | |
| AGGCAGGCAAAGTCTTGCAG+AGG | + | chr3.4:3332608-3332627 | None:intergenic | 55.0% | |
| AGGTCTGAAAGGGGCCTTTC+AGG | + | chr3.4:3336436-3336455 | None:intergenic | 55.0% | |
| ATCTCAAAGCGGCTGGCAGA+GGG | - | chr3.4:3336935-3336954 | MS.gene009397:CDS | 55.0% | |
| CAGAGCTGACACCATCCAGT+GGG | + | chr3.4:3332686-3332705 | None:intergenic | 55.0% | |
| CTGTGCTTCCGTTGGAGGTT+GGG | - | chr3.4:3330741-3330760 | MS.gene009397:intron | 55.0% | |
| GAAAGGCCCCTTTCAGACCT+TGG | - | chr3.4:3336436-3336455 | MS.gene009397:intron | 55.0% | |
| GATCCCCCTAGTAAGGTCTC+TGG | + | chr3.4:3331839-3331858 | None:intergenic | 55.0% | |
| GCACCAATCAGCGCGGAAAA+CGG | - | chr3.4:3330608-3330627 | MS.gene009397:CDS | 55.0% | |
| GCCTAAACCTCTACTTCCCC+CGG | + | chr3.4:3332582-3332601 | None:intergenic | 55.0% | |
| GCTTGTCCATTGCCCAACAG+AGG | - | chr3.4:3331419-3331438 | MS.gene009397:intron | 55.0% | |
| GGACTCAGATCCCCCTAGTA+AGG | + | chr3.4:3331846-3331865 | None:intergenic | 55.0% | |
| GTCCATTGCCCAACAGAGGT+TGG | - | chr3.4:3331423-3331442 | MS.gene009397:intron | 55.0% | |
| TCACCCTCCCACCTTACCAA+AGG | - | chr3.4:3336248-3336267 | MS.gene009397:intron | 55.0% | |
| TCCGGGGGAAGTAGAGGTTT+AGG | - | chr3.4:3332578-3332597 | MS.gene009397:CDS | 55.0% | |
| TCTGTGCTTCCGTTGGAGGT+TGG | - | chr3.4:3330740-3330759 | MS.gene009397:intron | 55.0% | |
| TCTTCAAACCTGATGCCCCC+TGG | + | chr3.4:3332994-3333013 | None:intergenic | 55.0% | |
| TTTGGTAAGGTGGGAGGGTG+AGG | + | chr3.4:3336249-3336268 | None:intergenic | 55.0% | |
| !! | GGTCTCTGGTTTGGGCCTAT+AGG | + | chr3.4:3331825-3331844 | None:intergenic | 55.0% |
| CATCTCAAAGCGGCTGGCAG+AGG | - | chr3.4:3336934-3336953 | MS.gene009397:CDS | 60.0% | |
| CGAGGTTCTTGCGCCACTAG+CGG | + | chr3.4:3331500-3331519 | None:intergenic | 60.0% | |
| GAGGTTCTTGCGCCACTAGC+GGG | + | chr3.4:3331499-3331518 | None:intergenic | 60.0% | |
| GATCGCCATCTCAAAGCGGC+TGG | - | chr3.4:3336928-3336947 | MS.gene009397:CDS | 60.0% | |
| GTACCGAATCTGACGGCGGA+GGG | + | chr3.4:3330688-3330707 | None:intergenic | 60.0% | |
| TCTCAAAGCGGCTGGCAGAG+GGG | - | chr3.4:3336936-3336955 | MS.gene009397:CDS | 60.0% | |
| ! | CGCATGCCGCCATCGGTTAA+CGG | + | chr3.4:3330665-3330684 | None:intergenic | 60.0% |
| ! | GTGATGTGCCGTTGGAGGGA+TGG | - | chr3.4:3330770-3330789 | MS.gene009397:intron | 60.0% |
| ! | TCCGCCGTCAGATTCGGTAC+CGG | - | chr3.4:3330688-3330707 | MS.gene009397:CDS | 60.0% |
| ! | TCCGGTACCGAATCTGACGG+CGG | + | chr3.4:3330692-3330711 | None:intergenic | 60.0% |
| !! | CTCTGCCAGCCGCTTTGAGA+TGG | + | chr3.4:3336936-3336955 | None:intergenic | 60.0% |
| !!! | GTGCCGTTTTCCGCGCTGAT+TGG | + | chr3.4:3330614-3330633 | None:intergenic | 60.0% |
| ACGCGCGTCCCAACCTCCAA+CGG | + | chr3.4:3330752-3330771 | None:intergenic | 65.0% | |
| CTCAAAGCGGCTGGCAGAGG+GGG | - | chr3.4:3336937-3336956 | MS.gene009397:CDS | 65.0% | |
| GCTCGACGCACCAATCAGCG+CGG | - | chr3.4:3330601-3330620 | MS.gene009397:CDS | 65.0% | |
| ! | CGGTGATTTGCCGTGACCGG+CGG | + | chr3.4:3330645-3330664 | None:intergenic | 65.0% |
| ! | GCGCGTGATGTGCCGTTGGA+GGG | - | chr3.4:3330766-3330785 | MS.gene009397:intron | 65.0% |
| ! | GGTACCGAATCTGACGGCGG+AGG | + | chr3.4:3330689-3330708 | None:intergenic | 65.0% |
| CGCGGAAAACGGCACCGCTC+CGG | - | chr3.4:3330619-3330638 | MS.gene009397:CDS | 70.0% | |
| GATTTGCCGTGACCGGCGGC+CGG | + | chr3.4:3330641-3330660 | None:intergenic | 70.0% | |
| GCGCCCTCCGCCGTCAGATT+CGG | - | chr3.4:3330682-3330701 | MS.gene009397:CDS | 70.0% | |
| GGACGCGCGTGATGTGCCGT+TGG | - | chr3.4:3330762-3330781 | MS.gene009397:intron | 70.0% | |
| ! | CGCGCGTGATGTGCCGTTGG+AGG | - | chr3.4:3330765-3330784 | MS.gene009397:intron | 70.0% |
| ! | CGGAGGGCGCATGCCGCCAT+CGG | + | chr3.4:3330672-3330691 | None:intergenic | 75.0% |
| ! | AACGGCACCGCTCCGGCCGC+CGG | - | chr3.4:3330626-3330645 | MS.gene009397:CDS | 80.0% |
| ! | ACCGCTCCGGCCGCCGGTCA+CGG | - | chr3.4:3330632-3330651 | MS.gene009397:CDS | 80.0% |
| ! | GCCGTGACCGGCGGCCGGAG+CGG | + | chr3.4:3330636-3330655 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 3330593 | 3336972 | 3330593 | ID=MS.gene009397 |
| chr3.4 | mRNA | 3330593 | 3336972 | 3330593 | ID=MS.gene009397.t1;Parent=MS.gene009397 |
| chr3.4 | exon | 3336684 | 3336972 | 3336684 | ID=MS.gene009397.t1.exon1;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3336684 | 3336972 | 3336684 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3335342 | 3335430 | 3335342 | ID=MS.gene009397.t1.exon2;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3335342 | 3335430 | 3335342 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3334508 | 3334570 | 3334508 | ID=MS.gene009397.t1.exon3;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3334508 | 3334570 | 3334508 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3333861 | 3334070 | 3333861 | ID=MS.gene009397.t1.exon4;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3333861 | 3334070 | 3333861 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3332557 | 3332625 | 3332557 | ID=MS.gene009397.t1.exon5;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3332557 | 3332625 | 3332557 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3331744 | 3331905 | 3331744 | ID=MS.gene009397.t1.exon6;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3331744 | 3331905 | 3331744 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3331264 | 3331357 | 3331264 | ID=MS.gene009397.t1.exon7;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3331264 | 3331357 | 3331264 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3331028 | 3331170 | 3331028 | ID=MS.gene009397.t1.exon8;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3331028 | 3331170 | 3331028 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| chr3.4 | exon | 3330593 | 3330754 | 3330593 | ID=MS.gene009397.t1.exon9;Parent=MS.gene009397.t1 |
| chr3.4 | CDS | 3330593 | 3330754 | 3330593 | ID=cds.MS.gene009397.t1;Parent=MS.gene009397.t1 |
| Gene Sequence |
| Protein sequence |
