Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009476.t1 | XP_013458835.1 | 96.6 | 804 | 27 | 0 | 1 | 804 | 1 | 804 | 0.00E+00 | 1586.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009476.t1 | Q9SJ20 | 81.0 | 816 | 143 | 2 | 1 | 804 | 1 | 816 | 0.0e+00 | 1384.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009476.t1 | A0A072UTF3 | 96.6 | 804 | 27 | 0 | 1 | 804 | 1 | 804 | 0.0e+00 | 1586.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene039012 | MS.gene009476 | PPI |
| MS.gene007306 | MS.gene009476 | PPI |
| MS.gene77617 | MS.gene009476 | PPI |
| MS.gene073967 | MS.gene009476 | PPI |
| MS.gene020558 | MS.gene009476 | PPI |
| MS.gene009476 | MS.gene92155 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009476.t1 | MTR_3g009480 | 96.642 | 804 | 27 | 0 | 1 | 804 | 1 | 804 | 0.0 | 1644 |
| MS.gene009476.t1 | MTR_8g092510 | 94.110 | 815 | 34 | 2 | 1 | 804 | 1 | 812 | 0.0 | 1612 |
| MS.gene009476.t1 | MTR_8g092500 | 82.759 | 58 | 10 | 0 | 42 | 99 | 12 | 69 | 7.29e-26 | 103 |
| MS.gene009476.t1 | MTR_8g092500 | 76.786 | 56 | 13 | 0 | 203 | 258 | 69 | 124 | 2.37e-20 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009476.t1 | AT2G21790 | 81.005 | 816 | 143 | 2 | 1 | 804 | 1 | 816 | 0.0 | 1431 |
Find 191 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGATATATTTGACTTCT+TGG | 0.169061 | 3.2:+3784489 | MS.gene009476:CDS |
| TTGGGTGCCTGATCTCTTTA+TGG | 0.175397 | 3.2:+3784570 | MS.gene009476:CDS |
| TTAACAGATAAGACCTTTCT+AGG | 0.217798 | 3.2:-3784024 | None:intergenic |
| TCAGTTGAGTAGTTGCTTCT+TGG | 0.230831 | 3.2:+3784213 | MS.gene009476:CDS |
| GCAAAAGATATTGGTTAATA+TGG | 0.246409 | 3.2:+3785692 | MS.gene009476:CDS |
| GAAAATTACGGATGCATAAT+CGG | 0.257386 | 3.2:-3783566 | None:intergenic |
| GTGGGATTGGGGTGCACTTC+GGG | 0.263837 | 3.2:+3785365 | MS.gene009476:CDS |
| TGAAGAATTCCCTTGCTTAC+AGG | 0.276160 | 3.2:-3785309 | None:intergenic |
| ACCTGGTTTGGCAGATTGTT+GGG | 0.280285 | 3.2:+3784642 | MS.gene009476:CDS |
| ACCCATTGGTATTGGAGTTC+AGG | 0.293692 | 3.2:+3785128 | MS.gene009476:CDS |
| TCCCTCCAATTTGTGGGATT+GGG | 0.296736 | 3.2:+3785353 | MS.gene009476:CDS |
| CTCCCTCCAATTTGTGGGAT+TGG | 0.303419 | 3.2:+3785352 | MS.gene009476:CDS |
| TCTTCACGATTTGACTGAAA+TGG | 0.304516 | 3.2:+3785554 | MS.gene009476:CDS |
| GGAGATCAAGCAAAAGATAT+TGG | 0.315716 | 3.2:+3785683 | MS.gene009476:CDS |
| TTTCTGTTGGACTTGTATAC+TGG | 0.326666 | 3.2:-3784873 | None:intergenic |
| GAAAAGCAACCAGCAGAATC+TGG | 0.327390 | 3.2:+3784813 | MS.gene009476:CDS |
| TCATCTGCCTCCTTCAACTT+AGG | 0.334668 | 3.2:-3785912 | None:intergenic |
| GACCTTTCTGCAGTTTCGAC+TGG | 0.335612 | 3.2:-3785090 | None:intergenic |
| GTGCTTCATTGGGGCAGAAC+AGG | 0.346214 | 3.2:-3784621 | None:intergenic |
| CGGCACAGACCCATTGGTAT+TGG | 0.349426 | 3.2:+3785120 | MS.gene009476:CDS |
| TGCACCCCAATCCCACAAAT+TGG | 0.350482 | 3.2:-3785358 | None:intergenic |
| CACCTGGTTTGGCAGATTGT+TGG | 0.366008 | 3.2:+3784641 | MS.gene009476:CDS |
| GCCAAACCAGGTGCTTCATT+GGG | 0.366941 | 3.2:-3784631 | None:intergenic |
| TTGAAGTCACAGATAGAAAC+TGG | 0.367181 | 3.2:+3784754 | MS.gene009476:CDS |
| CTTCACGATTTGACTGAAAT+GGG | 0.371085 | 3.2:+3785555 | MS.gene009476:CDS |
| GTTTGCGCCGGCGTTTATAA+AGG | 0.372735 | 3.2:+3783478 | MS.gene009476:CDS |
| TTGTTTAACTGTTGAGCCTC+TGG | 0.375695 | 3.2:-3785195 | None:intergenic |
| ACTACCGCTATAAGTTTCAT+AGG | 0.377693 | 3.2:-3785286 | None:intergenic |
| TGCCAAACCAGGTGCTTCAT+TGG | 0.378584 | 3.2:-3784632 | None:intergenic |
| CCGCGTTATGTAAGAGATAA+GGG | 0.378983 | 3.2:+3784928 | MS.gene009476:CDS |
| GCATCTACCAGTCAAATTCT+TGG | 0.379695 | 3.2:+3785444 | MS.gene009476:CDS |
| TTGTAGATATTAGAAGTATA+TGG | 0.388878 | 3.2:-3785486 | None:intergenic |
| CCCCAATGAAGCACCTGGTT+TGG | 0.394351 | 3.2:+3784630 | MS.gene009476:CDS |
| AAGTCATATACAAAACTGTT+TGG | 0.399108 | 3.2:+3785661 | MS.gene009476:CDS |
| CAACTTAGGTTGATCTTCAA+TGG | 0.403093 | 3.2:-3785898 | None:intergenic |
| TGGTCAAAGGGTTTGAAGAC+TGG | 0.404567 | 3.2:+3785813 | MS.gene009476:CDS |
| CATGAAGAATGCGGCTCGAT+TGG | 0.412162 | 3.2:+3783946 | MS.gene009476:CDS |
| TACTGCACGTTATGTTGATC+AGG | 0.416179 | 3.2:+3784417 | MS.gene009476:CDS |
| CCCATTGGTATTGGAGTTCA+GGG | 0.416868 | 3.2:+3785129 | MS.gene009476:CDS |
| CAACTGAGGTCTAGGTGTTC+CGG | 0.419416 | 3.2:-3784197 | None:intergenic |
| AAAATTACGGATGCATAATC+GGG | 0.422737 | 3.2:-3783565 | None:intergenic |
| ACTTTCTGAGCGACTAAAAC+AGG | 0.423118 | 3.2:-3783457 | None:intergenic |
| AGTCATATACAAAACTGTTT+GGG | 0.426393 | 3.2:+3785662 | MS.gene009476:CDS |
| CTTCTTAACAGTTTCAGAAA+AGG | 0.427555 | 3.2:-3783885 | None:intergenic |
| ATAGTGAGATAGTCTATGAT+AGG | 0.427891 | 3.2:+3783969 | MS.gene009476:CDS |
| TGTGACTCCCTCCAATTTGT+GGG | 0.428684 | 3.2:+3785347 | MS.gene009476:CDS |
| TCTTATCTGTTAAAAGTTGA+AGG | 0.442873 | 3.2:+3784034 | MS.gene009476:CDS |
| TCTCATCAATCTAAGCTTGT+TGG | 0.444163 | 3.2:+3784964 | MS.gene009476:CDS |
| CCCTCCAATTTGTGGGATTG+GGG | 0.452935 | 3.2:+3785354 | MS.gene009476:CDS |
| CTTCTTGGTTTGCATGAAAG+AGG | 0.454593 | 3.2:+3784228 | MS.gene009476:CDS |
| AGTAAATCTGCTGGAGGGAT+TGG | 0.455606 | 3.2:+3784298 | MS.gene009476:CDS |
| GGAACAAACGGAACATCTAA+TGG | 0.457199 | 3.2:+3784364 | MS.gene009476:CDS |
| CTCATCAATCTAAGCTTGTT+GGG | 0.458711 | 3.2:+3784965 | MS.gene009476:CDS |
| TTGGAATTGAAAATAAATCA+TGG | 0.459190 | 3.2:+3784508 | MS.gene009476:CDS |
| TGGTAGATGCAGTTGGCATA+GGG | 0.460342 | 3.2:-3785431 | None:intergenic |
| TGCCCGTGGTAGTTACATTC+GGG | 0.461603 | 3.2:+3784342 | MS.gene009476:CDS |
| ACTGTGGAATCCTGCACTTA+AGG | 0.461877 | 3.2:+3785578 | MS.gene009476:CDS |
| GTGTGACTCCCTCCAATTTG+TGG | 0.463050 | 3.2:+3785346 | MS.gene009476:CDS |
| GGGGATTTATGATACATTGA+AGG | 0.466284 | 3.2:+3784261 | MS.gene009476:CDS |
| CATGAAAGAGGATAGTATTG+AGG | 0.467618 | 3.2:+3784240 | MS.gene009476:CDS |
| CATCACTTGCAGCTCGTGTT+CGG | 0.469357 | 3.2:-3785848 | None:intergenic |
| TTGGATTCAAAACCCTAGAA+AGG | 0.474503 | 3.2:+3784011 | MS.gene009476:CDS |
| TGTGGGATTGGGGTGCACTT+CGG | 0.478406 | 3.2:+3785364 | MS.gene009476:CDS |
| GGAGCAGAGGCTCTAGTAAT+CGG | 0.485766 | 3.2:+3784986 | MS.gene009476:CDS |
| CTGGTAGATGCAGTTGGCAT+AGG | 0.486502 | 3.2:-3785432 | None:intergenic |
| TGTGAATTAGCTGCAAAAGA+AGG | 0.487389 | 3.2:+3785261 | MS.gene009476:CDS |
| GTGCCCGTGGTAGTTACATT+CGG | 0.488383 | 3.2:+3784341 | MS.gene009476:CDS |
| ACCGCGTTATGTAAGAGATA+AGG | 0.490094 | 3.2:+3784927 | MS.gene009476:CDS |
| GACCTCAACATATGATAATG+AGG | 0.490912 | 3.2:+3784071 | MS.gene009476:CDS |
| GGTATCAACAGTGAACTTGA+TGG | 0.492813 | 3.2:-3785871 | None:intergenic |
| GCACACCATCTGTGCCATCT+TGG | 0.493955 | 3.2:-3785958 | None:intergenic |
| GAGCTCGGAGCGATGGGGAA+TGG | 0.495090 | 3.2:+3784596 | MS.gene009476:CDS |
| GGTCAAAGGGTTTGAAGACT+GGG | 0.500162 | 3.2:+3785814 | MS.gene009476:CDS |
| TTGCTGTGTACTTGGAGCCA+TGG | 0.501413 | 3.2:+3784464 | MS.gene009476:CDS |
| CAACTACTCAACTGAGGTCT+AGG | 0.502455 | 3.2:-3784205 | None:intergenic |
| TGGAAAGAGCTCGGAGCGAT+GGG | 0.504046 | 3.2:+3784590 | MS.gene009476:CDS |
| TGTTGATTCAGTTGGCTGGT+AGG | 0.505376 | 3.2:+3783825 | MS.gene009476:intron |
| CTACCGCTATAAGTTTCATA+GGG | 0.506721 | 3.2:-3785285 | None:intergenic |
| CCCTGAACTCCAATACCAAT+GGG | 0.507374 | 3.2:-3785129 | None:intergenic |
| TAATTGTGCCCAGATTCTGC+TGG | 0.508224 | 3.2:-3784822 | None:intergenic |
| GGTTCGTTTCGACAAGATAA+CGG | 0.508783 | 3.2:+3783387 | MS.gene009476:CDS |
| ATGGAAAGAGCTCGGAGCGA+TGG | 0.509824 | 3.2:+3784589 | MS.gene009476:CDS |
| GGAGTCACACCCCACATGTC+AGG | 0.510046 | 3.2:-3785333 | None:intergenic |
| ACCTTTCTGCAGTTTCGACT+GGG | 0.510773 | 3.2:-3785089 | None:intergenic |
| TGCATAATCGGGGTGGTTAG+CGG | 0.511312 | 3.2:-3783554 | None:intergenic |
| TTCTGCCCCAATGAAGCACC+TGG | 0.511533 | 3.2:+3784625 | MS.gene009476:CDS |
| ATGATAATGAGGGTTTCTGT+TGG | 0.513641 | 3.2:+3784082 | MS.gene009476:CDS |
| TTACACACAGCAGTTTCTGT+TGG | 0.517348 | 3.2:-3784886 | None:intergenic |
| ATGAAAGAGGATAGTATTGA+GGG | 0.520773 | 3.2:+3784241 | MS.gene009476:CDS |
| GCTCTTTCCATAAAGAGATC+AGG | 0.521910 | 3.2:-3784577 | None:intergenic |
| AGTTACATTCGGGGAACAAA+CGG | 0.524482 | 3.2:+3784352 | MS.gene009476:CDS |
| GTTATTGCCAAGAATTTGAC+TGG | 0.525519 | 3.2:-3785451 | None:intergenic |
| ATAATCTTATCCTTAAGTGC+AGG | 0.526709 | 3.2:-3785588 | None:intergenic |
| TGAAGATCAACCTAAGTTGA+AGG | 0.527736 | 3.2:+3785902 | MS.gene009476:CDS |
| GGCAGATGATGCTGAGAATG+AGG | 0.529942 | 3.2:+3785926 | MS.gene009476:CDS |
| CCTGGTTTGGCAGATTGTTG+GGG | 0.532035 | 3.2:+3784643 | MS.gene009476:CDS |
| GTTAGCGGTCATGCCGGCAG+CGG | 0.536157 | 3.2:-3783539 | None:intergenic |
| AAAAGCAACCAGCAGAATCT+GGG | 0.538023 | 3.2:+3784814 | MS.gene009476:CDS |
| TGCCATTCCTAGTAGTATGA+AGG | 0.541047 | 3.2:-3785163 | None:intergenic |
| TCATTGAACACACGAAGCAT+TGG | 0.544001 | 3.2:-3784394 | None:intergenic |
| GCTGATACCTTCATACTACT+AGG | 0.545879 | 3.2:+3785156 | MS.gene009476:CDS |
| TCCCCGAATGTAACTACCAC+GGG | 0.547310 | 3.2:-3784344 | None:intergenic |
| AACTTGCGGCACAGACCCAT+TGG | 0.547601 | 3.2:+3785114 | MS.gene009476:CDS |
| AGGTTGATCTTCAATGGCAG+AGG | 0.549832 | 3.2:-3785892 | None:intergenic |
| AGGTTGAAGAAACTCAGTTA+CGG | 0.550367 | 3.2:+3783412 | MS.gene009476:CDS |
| TAACAGATAAGACCTTTCTA+GGG | 0.551860 | 3.2:-3784023 | None:intergenic |
| TCTAAGCTTGTTGGGAGCAG+AGG | 0.552144 | 3.2:+3784973 | MS.gene009476:CDS |
| TTAGCCGCTGAAACCGCTGC+CGG | 0.553923 | 3.2:+3783526 | MS.gene009476:CDS |
| GCTGTCATTAGTAAATCTGC+TGG | 0.558625 | 3.2:+3784289 | MS.gene009476:CDS |
| TTCTGAAACTGTTAAGAAGG+CGG | 0.559005 | 3.2:+3783889 | MS.gene009476:CDS |
| CCCCAACAATCTGCCAAACC+AGG | 0.559209 | 3.2:-3784643 | None:intergenic |
| TCTGTTAAAAGTTGAAGGAG+TGG | 0.561302 | 3.2:+3784039 | MS.gene009476:CDS |
| ATCATTACATGTCTCAGAGA+TGG | 0.562165 | 3.2:+3784143 | MS.gene009476:CDS |
| ATTTGACTGGTAGATGCAGT+TGG | 0.562931 | 3.2:-3785438 | None:intergenic |
| AAAGAGATCAGGCACCCAAA+GGG | 0.564159 | 3.2:-3784566 | None:intergenic |
| TGCTTCATTGGGGCAGAACA+GGG | 0.566323 | 3.2:-3784620 | None:intergenic |
| GATAAGATTATCTATGACAA+TGG | 0.569436 | 3.2:+3785600 | MS.gene009476:CDS |
| TAGTGAGATAGTCTATGATA+GGG | 0.569771 | 3.2:+3783970 | MS.gene009476:CDS |
| TAGCGGTAGTCCTGTAAGCA+AGG | 0.570043 | 3.2:+3785299 | MS.gene009476:CDS |
| GGTGTGGTTTCAACTTCCAC+AGG | 0.570169 | 3.2:-3786009 | None:intergenic |
| TGATATCAAAGACGGGTGTA+CGG | 0.571641 | 3.2:+3785391 | MS.gene009476:CDS |
| TTGTTCAAGCACAGAGTCTG+TGG | 0.573288 | 3.2:+3784722 | MS.gene009476:CDS |
| AATTCTTCAGCCTGACATGT+GGG | 0.573350 | 3.2:+3785323 | MS.gene009476:CDS |
| ATTGAAAATAAATCATGGAA+AGG | 0.576131 | 3.2:+3784513 | MS.gene009476:CDS |
| ATCTCTTTATGGAAAGAGCT+CGG | 0.576641 | 3.2:+3784581 | MS.gene009476:CDS |
| CATGCCGGCAGCGGTTTCAG+CGG | 0.576670 | 3.2:-3783530 | None:intergenic |
| ACCCCAATCCCACAAATTGG+AGG | 0.580755 | 3.2:-3785355 | None:intergenic |
| ACCCTGAACTCCAATACCAA+TGG | 0.583702 | 3.2:-3785130 | None:intergenic |
| CACTTGCAGCTCGTGTTCGG+AGG | 0.584028 | 3.2:-3785845 | None:intergenic |
| ACTGCACGTTATGTTGATCA+GGG | 0.592882 | 3.2:+3784418 | MS.gene009476:CDS |
| TCGGGAGATGATATCAAAGA+CGG | 0.597011 | 3.2:+3785383 | MS.gene009476:CDS |
| TGATACCAAGATGGCACAGA+TGG | 0.597252 | 3.2:+3785953 | MS.gene009476:CDS |
| AAAAGTTGAAGGAGTGGTTG+TGG | 0.599235 | 3.2:+3784045 | MS.gene009476:CDS |
| CCCTTATCTCTTACATAACG+CGG | 0.600722 | 3.2:-3784928 | None:intergenic |
| GTCGCTCAGAAAGTTTGCGC+CGG | 0.602841 | 3.2:+3783466 | MS.gene009476:CDS |
| CCCCAATCCCACAAATTGGA+GGG | 0.603150 | 3.2:-3785354 | None:intergenic |
| AGAGATGAGTGTACGTCCTG+TGG | 0.603838 | 3.2:+3785993 | MS.gene009476:CDS |
| ACCCTCATTATCATATGTTG+AGG | 0.604412 | 3.2:-3784073 | None:intergenic |
| CGGGAGATGATATCAAAGAC+GGG | 0.605097 | 3.2:+3785384 | MS.gene009476:CDS |
| GGGGTGGTTAGCGGTCATGC+CGG | 0.606727 | 3.2:-3783545 | None:intergenic |
| TACCTTCATACTACTAGGAA+TGG | 0.607015 | 3.2:+3785161 | MS.gene009476:CDS |
| TGAAATTATCATGAAGAATG+CGG | 0.608901 | 3.2:+3783937 | MS.gene009476:CDS |
| TGACCAAGCATGAAAATGCA+AGG | 0.609918 | 3.2:-3785796 | None:intergenic |
| TAAAGAGATCAGGCACCCAA+AGG | 0.610062 | 3.2:-3784567 | None:intergenic |
| TGCACGTTATGTTGATCAGG+GGG | 0.610861 | 3.2:+3784420 | MS.gene009476:CDS |
| GAAGAGAGACGGTCGTCAAG+AGG | 0.611484 | 3.2:+3783363 | MS.gene009476:CDS |
| ACCCAGTCGAAACTGCAGAA+AGG | 0.616552 | 3.2:+3785088 | MS.gene009476:CDS |
| TTAGATTGATGAGACTCCAC+AGG | 0.616817 | 3.2:-3784955 | None:intergenic |
| GTCATTAGTAAATCTGCTGG+AGG | 0.617415 | 3.2:+3784292 | MS.gene009476:CDS |
| GGTTTCTGTTGGAATTCACA+AGG | 0.619618 | 3.2:+3784093 | MS.gene009476:CDS |
| ACTAGGAGAGGTTACTTCTG+TGG | 0.620174 | 3.2:+3785026 | MS.gene009476:CDS |
| AAGAGATAAGGGTTTGCCTG+TGG | 0.620674 | 3.2:+3784939 | MS.gene009476:CDS |
| GAATTCTTCAGCCTGACATG+TGG | 0.621173 | 3.2:+3785322 | MS.gene009476:CDS |
| ATTCTTCAGCCTGACATGTG+GGG | 0.624402 | 3.2:+3785324 | MS.gene009476:CDS |
| AGCGGTAGTCCTGTAAGCAA+GGG | 0.628820 | 3.2:+3785300 | MS.gene009476:CDS |
| TACAATCGCAGAGTGCTAAG+TGG | 0.632548 | 3.2:+3785504 | MS.gene009476:CDS |
| ACCTCAACATATGATAATGA+GGG | 0.634892 | 3.2:+3784072 | MS.gene009476:CDS |
| GCCCGTGGTAGTTACATTCG+GGG | 0.635773 | 3.2:+3784343 | MS.gene009476:CDS |
| CCAAACCAGGTGCTTCATTG+GGG | 0.636999 | 3.2:-3784630 | None:intergenic |
| CTGCAGAAAGGTCAAACTTG+CGG | 0.641053 | 3.2:+3785100 | MS.gene009476:CDS |
| ATGTACGTTGTGAAGAGAGA+CGG | 0.641716 | 3.2:+3783352 | MS.gene009476:CDS |
| GTTAATATGGCTGTTGATCG+AGG | 0.643154 | 3.2:+3785705 | MS.gene009476:CDS |
| TTCCCCGAATGTAACTACCA+CGG | 0.643519 | 3.2:-3784345 | None:intergenic |
| TGAGGACGATGATACCAAGA+TGG | 0.643523 | 3.2:+3785944 | MS.gene009476:CDS |
| GGCTAATTCATCAAGTTGAG+TGG | 0.644215 | 3.2:-3783509 | None:intergenic |
| GGTAGATGCAGTTGGCATAG+GGG | 0.644273 | 3.2:-3785430 | None:intergenic |
| TACACATCATCAGCAATCAA+CGG | 0.647516 | 3.2:-3783914 | None:intergenic |
| AAATCTGCACAAGAACACAC+TGG | 0.648777 | 3.2:+3783859 | MS.gene009476:CDS |
| GAGAGACGGTCGTCAAGAGG+CGG | 0.654678 | 3.2:+3783366 | MS.gene009476:CDS |
| TCAAATATATCAGCATGCCA+TGG | 0.655929 | 3.2:-3784481 | None:intergenic |
| GTTCACAACATACGTGCCCG+TGG | 0.656567 | 3.2:+3784328 | MS.gene009476:CDS |
| GCGGTAGTGCAATTGATGCA+AGG | 0.658257 | 3.2:-3784909 | None:intergenic |
| TAATTCATCAAGTTGAGTGG+TGG | 0.658888 | 3.2:-3783506 | None:intergenic |
| GTTCCGGCGTTGAAAAGTGT+AGG | 0.659447 | 3.2:-3784181 | None:intergenic |
| AATGGCATTTGATTCACCAG+AGG | 0.671867 | 3.2:+3785179 | MS.gene009476:CDS |
| CTGCACGTTATGTTGATCAG+GGG | 0.673705 | 3.2:+3784419 | MS.gene009476:CDS |
| GGTGACGCCTTTATAAACGC+CGG | 0.677755 | 3.2:-3783485 | None:intergenic |
| TCATTAGTAAATCTGCTGGA+GGG | 0.679752 | 3.2:+3784293 | MS.gene009476:CDS |
| TCAAAGCTTAAATATACACA+TGG | 0.684728 | 3.2:+3785746 | MS.gene009476:CDS |
| GGAAAGAGCTCGGAGCGATG+GGG | 0.686822 | 3.2:+3784591 | MS.gene009476:CDS |
| AGATCAACCTAAGTTGAAGG+AGG | 0.690518 | 3.2:+3785905 | MS.gene009476:CDS |
| TGAAAGAGGATAGTATTGAG+GGG | 0.695012 | 3.2:+3784242 | MS.gene009476:CDS |
| GGCCCCTATGAAACTTATAG+CGG | 0.706024 | 3.2:+3785282 | MS.gene009476:CDS |
| ATTTGACTGAAATGGGACTG+TGG | 0.706027 | 3.2:+3785562 | MS.gene009476:CDS |
| AGAGGCTCAACAGTTAAACA+AGG | 0.706619 | 3.2:+3785197 | MS.gene009476:CDS |
| TTACGGATGCATAATCGGGG+TGG | 0.709619 | 3.2:-3783561 | None:intergenic |
| AAGAAGCAACTACTCAACTG+AGG | 0.713107 | 3.2:-3784211 | None:intergenic |
| TACCGCTATAAGTTTCATAG+GGG | 0.734200 | 3.2:-3785284 | None:intergenic |
| AAATTACGGATGCATAATCG+GGG | 0.740153 | 3.2:-3783564 | None:intergenic |
| GCACGTTATGTTGATCAGGG+GGG | 0.745631 | 3.2:+3784421 | MS.gene009476:CDS |
| GTTTCGACAAGATAACGGCG+AGG | 0.762520 | 3.2:+3783392 | MS.gene009476:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATTATTTTATTAAGGT+TGG | - | chr3.2:3785058-3785077 | None:intergenic | 15.0% |
| !!! | TGACATCAATTATTTTATTA+AGG | - | chr3.2:3785062-3785081 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTTTGAATTGTTT+TGG | + | chr3.2:3783645-3783664 | MS.gene009476:intron | 15.0% |
| !! | AACAACAAAAAATTCATCAT+CGG | - | chr3.2:3783627-3783646 | None:intergenic | 20.0% |
| !! | ATTGAAAATAAATCATGGAA+AGG | + | chr3.2:3784513-3784532 | MS.gene009476:CDS | 20.0% |
| !! | TTGGAATTGAAAATAAATCA+TGG | + | chr3.2:3784508-3784527 | MS.gene009476:CDS | 20.0% |
| !!! | GTTTTGTTTTTGAATTGTTT+TGG | + | chr3.2:3783798-3783817 | MS.gene009476:intron | 20.0% |
| !!! | TATTTTGACTTTGAAAAACT+AGG | + | chr3.2:3785009-3785028 | MS.gene009476:CDS | 20.0% |
| !!! | TTGTAGATATTAGAAGTATA+TGG | - | chr3.2:3785489-3785508 | None:intergenic | 20.0% |
| ! | AAGTCATATACAAAACTGTT+TGG | + | chr3.2:3785661-3785680 | MS.gene009476:CDS | 25.0% |
| ! | AGTCATATACAAAACTGTTT+GGG | + | chr3.2:3785662-3785681 | MS.gene009476:CDS | 25.0% |
| ! | GATAAGATTATCTATGACAA+TGG | + | chr3.2:3785600-3785619 | MS.gene009476:CDS | 25.0% |
| ! | TCAAAGCTTAAATATACACA+TGG | + | chr3.2:3785746-3785765 | MS.gene009476:CDS | 25.0% |
| ! | TCTTATCTGTTAAAAGTTGA+AGG | + | chr3.2:3784034-3784053 | MS.gene009476:CDS | 25.0% |
| ! | TGAAATTATCATGAAGAATG+CGG | + | chr3.2:3783937-3783956 | MS.gene009476:CDS | 25.0% |
| !! | GCAAAAGATATTGGTTAATA+TGG | + | chr3.2:3785692-3785711 | MS.gene009476:CDS | 25.0% |
| !!! | AAATCCTTACATGCTTTTTA+AGG | + | chr3.2:3784777-3784796 | MS.gene009476:CDS | 25.0% |
| !!! | TTTTTAAGGATACTTGCAAT+AGG | + | chr3.2:3784791-3784810 | MS.gene009476:CDS | 25.0% |
| AAAATTACGGATGCATAATC+GGG | - | chr3.2:3783568-3783587 | None:intergenic | 30.0% | |
| ACGTTAAAGAACCCTAAAAA+AGG | - | chr3.2:3783595-3783614 | None:intergenic | 30.0% | |
| ATAATCTTATCCTTAAGTGC+AGG | - | chr3.2:3785591-3785610 | None:intergenic | 30.0% | |
| ATAGTGAGATAGTCTATGAT+AGG | + | chr3.2:3783969-3783988 | MS.gene009476:CDS | 30.0% | |
| CTTCTTAACAGTTTCAGAAA+AGG | - | chr3.2:3783888-3783907 | None:intergenic | 30.0% | |
| GAAAATTACGGATGCATAAT+CGG | - | chr3.2:3783569-3783588 | None:intergenic | 30.0% | |
| TAAAAAAGGCGGGAAAATTA+CGG | - | chr3.2:3783581-3783600 | None:intergenic | 30.0% | |
| TAACAGATAAGACCTTTCTA+GGG | - | chr3.2:3784026-3784045 | None:intergenic | 30.0% | |
| TAGTGAGATAGTCTATGATA+GGG | + | chr3.2:3783970-3783989 | MS.gene009476:CDS | 30.0% | |
| TTAAAGAACCCTAAAAAAGG+CGG | - | chr3.2:3783592-3783611 | None:intergenic | 30.0% | |
| TTAACAGATAAGACCTTTCT+AGG | - | chr3.2:3784027-3784046 | None:intergenic | 30.0% | |
| ! | ACCTCAACATATGATAATGA+GGG | + | chr3.2:3784072-3784091 | MS.gene009476:CDS | 30.0% |
| ! | ATGAAAGAGGATAGTATTGA+GGG | + | chr3.2:3784241-3784260 | MS.gene009476:CDS | 30.0% |
| ! | GTATCCTTAAAAAGCATGTA+AGG | - | chr3.2:3784784-3784803 | None:intergenic | 30.0% |
| ! | TGCTGATATATTTGACTTCT+TGG | + | chr3.2:3784489-3784508 | MS.gene009476:CDS | 30.0% |
| !! | TAATTTTCCCGCCTTTTTTA+GGG | + | chr3.2:3783581-3783600 | MS.gene009476:intron | 30.0% |
| !!! | AGATTTATTTTACGCCCTTT+GGG | + | chr3.2:3784552-3784571 | MS.gene009476:CDS | 30.0% |
| !!! | CTTTTCTGAAACTGTTAAGA+AGG | + | chr3.2:3783886-3783905 | MS.gene009476:CDS | 30.0% |
| !!! | GATTTTGACTACGATTACTT+TGG | + | chr3.2:3783992-3784011 | MS.gene009476:CDS | 30.0% |
| !!! | TATATGACTTTTAGTTCAGC+AGG | - | chr3.2:3785651-3785670 | None:intergenic | 30.0% |
| !!! | TTGGATTTTGTTGATTCAGT+TGG | + | chr3.2:3783817-3783836 | MS.gene009476:intron | 30.0% |
| AAATTACGGATGCATAATCG+GGG | - | chr3.2:3783567-3783586 | None:intergenic | 35.0% | |
| ACCCTCATTATCATATGTTG+AGG | - | chr3.2:3784076-3784095 | None:intergenic | 35.0% | |
| ACTACCGCTATAAGTTTCAT+AGG | - | chr3.2:3785289-3785308 | None:intergenic | 35.0% | |
| AGGTTGAAGAAACTCAGTTA+CGG | + | chr3.2:3783412-3783431 | MS.gene009476:CDS | 35.0% | |
| ATCATTACATGTCTCAGAGA+TGG | + | chr3.2:3784143-3784162 | MS.gene009476:CDS | 35.0% | |
| ATCTCTTTATGGAAAGAGCT+CGG | + | chr3.2:3784581-3784600 | MS.gene009476:CDS | 35.0% | |
| CATGAAAGAGGATAGTATTG+AGG | + | chr3.2:3784240-3784259 | MS.gene009476:CDS | 35.0% | |
| CTACCGCTATAAGTTTCATA+GGG | - | chr3.2:3785288-3785307 | None:intergenic | 35.0% | |
| CTTCACGATTTGACTGAAAT+GGG | + | chr3.2:3785555-3785574 | MS.gene009476:CDS | 35.0% | |
| GGAGATCAAGCAAAAGATAT+TGG | + | chr3.2:3785683-3785702 | MS.gene009476:CDS | 35.0% | |
| GGGGATTTATGATACATTGA+AGG | + | chr3.2:3784261-3784280 | MS.gene009476:CDS | 35.0% | |
| GTTATTGCCAAGAATTTGAC+TGG | - | chr3.2:3785454-3785473 | None:intergenic | 35.0% | |
| TAAAGAACCCTAAAAAAGGC+GGG | - | chr3.2:3783591-3783610 | None:intergenic | 35.0% | |
| TACACATCATCAGCAATCAA+CGG | - | chr3.2:3783917-3783936 | None:intergenic | 35.0% | |
| TACACTCAGTATGAAAAAGC+AGG | + | chr3.2:3784685-3784704 | MS.gene009476:CDS | 35.0% | |
| TACCGCTATAAGTTTCATAG+GGG | - | chr3.2:3785287-3785306 | None:intergenic | 35.0% | |
| TACCTTCATACTACTAGGAA+TGG | + | chr3.2:3785161-3785180 | MS.gene009476:CDS | 35.0% | |
| TCAAAGAACCCTAAAAAAGG+CGG | - | chr3.2:3783746-3783765 | None:intergenic | 35.0% | |
| TCAAATATATCAGCATGCCA+TGG | - | chr3.2:3784484-3784503 | None:intergenic | 35.0% | |
| TCATTAGTAAATCTGCTGGA+GGG | + | chr3.2:3784293-3784312 | MS.gene009476:CDS | 35.0% | |
| TCTCATCAATCTAAGCTTGT+TGG | + | chr3.2:3784964-3784983 | MS.gene009476:CDS | 35.0% | |
| TCTGTTAAAAGTTGAAGGAG+TGG | + | chr3.2:3784039-3784058 | MS.gene009476:CDS | 35.0% | |
| TCTTCACGATTTGACTGAAA+TGG | + | chr3.2:3785554-3785573 | MS.gene009476:CDS | 35.0% | |
| TGTGAATTAGCTGCAAAAGA+AGG | + | chr3.2:3785261-3785280 | MS.gene009476:CDS | 35.0% | |
| TTGAAGTCACAGATAGAAAC+TGG | + | chr3.2:3784754-3784773 | MS.gene009476:CDS | 35.0% | |
| TTGGATTCAAAACCCTAGAA+AGG | + | chr3.2:3784011-3784030 | MS.gene009476:CDS | 35.0% | |
| TTGTCTGCTAGGATTGTTTA+GGG | + | chr3.2:3783683-3783702 | MS.gene009476:intron | 35.0% | |
| TTTCTGTTGGACTTGTATAC+TGG | - | chr3.2:3784876-3784895 | None:intergenic | 35.0% | |
| ! | ATGATAATGAGGGTTTCTGT+TGG | + | chr3.2:3784082-3784101 | MS.gene009476:CDS | 35.0% |
| ! | ATTGTTTAGGGTTTAGGGTT+AGG | + | chr3.2:3783695-3783714 | MS.gene009476:intron | 35.0% |
| ! | CAAGGAAGTAAGCTTTTGAT+AGG | - | chr3.2:3785781-3785800 | None:intergenic | 35.0% |
| ! | CATTTTCATGCTTGGTCAAA+GGG | + | chr3.2:3785801-3785820 | MS.gene009476:CDS | 35.0% |
| ! | CTAGGATTGTTTAGGGTTTA+GGG | + | chr3.2:3783690-3783709 | MS.gene009476:intron | 35.0% |
| ! | CTCATCAATCTAAGCTTGTT+GGG | + | chr3.2:3784965-3784984 | MS.gene009476:CDS | 35.0% |
| ! | GAAGTAAGCTTTTGATAGGT+GGG | - | chr3.2:3785777-3785796 | None:intergenic | 35.0% |
| ! | GACCTCAACATATGATAATG+AGG | + | chr3.2:3784071-3784090 | MS.gene009476:CDS | 35.0% |
| ! | GTAATTTTCCCGCCTTTTTT+AGG | + | chr3.2:3783580-3783599 | MS.gene009476:intron | 35.0% |
| ! | TGAAAGAGGATAGTATTGAG+GGG | + | chr3.2:3784242-3784261 | MS.gene009476:CDS | 35.0% |
| ! | TGAAGATCAACCTAAGTTGA+AGG | + | chr3.2:3785902-3785921 | MS.gene009476:CDS | 35.0% |
| ! | TGACTTTGAAAAACTAGGAG+AGG | + | chr3.2:3785014-3785033 | MS.gene009476:CDS | 35.0% |
| ! | TTGTTTAGGGTTTAGGGTTA+GGG | + | chr3.2:3783696-3783715 | MS.gene009476:intron | 35.0% |
| !! | CAACTTAGGTTGATCTTCAA+TGG | - | chr3.2:3785901-3785920 | None:intergenic | 35.0% |
| !! | TAATTCATCAAGTTGAGTGG+TGG | - | chr3.2:3783509-3783528 | None:intergenic | 35.0% |
| !! | TATTGATTCAGTTGTCTGCT+AGG | + | chr3.2:3783672-3783691 | MS.gene009476:intron | 35.0% |
| !! | TTCTGAAACTGTTAAGAAGG+CGG | + | chr3.2:3783889-3783908 | MS.gene009476:CDS | 35.0% |
| !!! | ATTTTGTTGATTCAGTTGGC+TGG | + | chr3.2:3783821-3783840 | MS.gene009476:intron | 35.0% |
| !!! | CACAAGAAGTTTTAAGAGCA+TGG | - | chr3.2:3785245-3785264 | None:intergenic | 35.0% |
| !!! | CCTTTTTTAGGGTTCTTTGA+CGG | + | chr3.2:3783746-3783765 | MS.gene009476:intron | 35.0% |
| !!! | GAGATTTATTTTACGCCCTT+TGG | + | chr3.2:3784551-3784570 | MS.gene009476:CDS | 35.0% |
| AAAAGCAACCAGCAGAATCT+GGG | + | chr3.2:3784814-3784833 | MS.gene009476:CDS | 40.0% | |
| AAAAGTTGAAGGAGTGGTTG+TGG | + | chr3.2:3784045-3784064 | MS.gene009476:CDS | 40.0% | |
| AAATCTGCACAAGAACACAC+TGG | + | chr3.2:3783859-3783878 | MS.gene009476:CDS | 40.0% | |
| AAGAAGCAACTACTCAACTG+AGG | - | chr3.2:3784214-3784233 | None:intergenic | 40.0% | |
| AATGGCATTTGATTCACCAG+AGG | + | chr3.2:3785179-3785198 | MS.gene009476:CDS | 40.0% | |
| AATTCTTCAGCCTGACATGT+GGG | + | chr3.2:3785323-3785342 | MS.gene009476:CDS | 40.0% | |
| ACCGCGTTATGTAAGAGATA+AGG | + | chr3.2:3784927-3784946 | MS.gene009476:CDS | 40.0% | |
| ACTGCACGTTATGTTGATCA+GGG | + | chr3.2:3784418-3784437 | MS.gene009476:CDS | 40.0% | |
| ACTTTCTGAGCGACTAAAAC+AGG | - | chr3.2:3783460-3783479 | None:intergenic | 40.0% | |
| AGAGGCTCAACAGTTAAACA+AGG | + | chr3.2:3785197-3785216 | MS.gene009476:CDS | 40.0% | |
| AGTTACATTCGGGGAACAAA+CGG | + | chr3.2:3784352-3784371 | MS.gene009476:CDS | 40.0% | |
| ATGTACGTTGTGAAGAGAGA+CGG | + | chr3.2:3783352-3783371 | MS.gene009476:CDS | 40.0% | |
| ATTTGACTGAAATGGGACTG+TGG | + | chr3.2:3785562-3785581 | MS.gene009476:CDS | 40.0% | |
| ATTTGACTGGTAGATGCAGT+TGG | - | chr3.2:3785441-3785460 | None:intergenic | 40.0% | |
| CAAAGAACCCTAAAAAAGGC+GGG | - | chr3.2:3783745-3783764 | None:intergenic | 40.0% | |
| CCCTTATCTCTTACATAACG+CGG | - | chr3.2:3784931-3784950 | None:intergenic | 40.0% | |
| CCGCGTTATGTAAGAGATAA+GGG | + | chr3.2:3784928-3784947 | MS.gene009476:CDS | 40.0% | |
| CCGTCAAAGAACCCTAAAAA+AGG | - | chr3.2:3783749-3783768 | None:intergenic | 40.0% | |
| GCATCTACCAGTCAAATTCT+TGG | + | chr3.2:3785444-3785463 | MS.gene009476:CDS | 40.0% | |
| GCTCTTTCCATAAAGAGATC+AGG | - | chr3.2:3784580-3784599 | None:intergenic | 40.0% | |
| GCTGATACCTTCATACTACT+AGG | + | chr3.2:3785156-3785175 | MS.gene009476:CDS | 40.0% | |
| GCTGTCATTAGTAAATCTGC+TGG | + | chr3.2:3784289-3784308 | MS.gene009476:CDS | 40.0% | |
| GGAACAAACGGAACATCTAA+TGG | + | chr3.2:3784364-3784383 | MS.gene009476:CDS | 40.0% | |
| GGTATCAACAGTGAACTTGA+TGG | - | chr3.2:3785874-3785893 | None:intergenic | 40.0% | |
| GGTTCGTTTCGACAAGATAA+CGG | + | chr3.2:3783387-3783406 | MS.gene009476:CDS | 40.0% | |
| GGTTTCTGTTGGAATTCACA+AGG | + | chr3.2:3784093-3784112 | MS.gene009476:CDS | 40.0% | |
| GTCATTAGTAAATCTGCTGG+AGG | + | chr3.2:3784292-3784311 | MS.gene009476:CDS | 40.0% | |
| GTTAATATGGCTGTTGATCG+AGG | + | chr3.2:3785705-3785724 | MS.gene009476:CDS | 40.0% | |
| GTTGTCTGCTAGGATTGTTT+AGG | + | chr3.2:3783682-3783701 | MS.gene009476:intron | 40.0% | |
| TACTGCACGTTATGTTGATC+AGG | + | chr3.2:3784417-3784436 | MS.gene009476:CDS | 40.0% | |
| TCAGTTGAGTAGTTGCTTCT+TGG | + | chr3.2:3784213-3784232 | MS.gene009476:CDS | 40.0% | |
| TCATTGAACACACGAAGCAT+TGG | - | chr3.2:3784397-3784416 | None:intergenic | 40.0% | |
| TCGGGAGATGATATCAAAGA+CGG | + | chr3.2:3785383-3785402 | MS.gene009476:CDS | 40.0% | |
| TGAAGAATTCCCTTGCTTAC+AGG | - | chr3.2:3785312-3785331 | None:intergenic | 40.0% | |
| TGACCAAGCATGAAAATGCA+AGG | - | chr3.2:3785799-3785818 | None:intergenic | 40.0% | |
| TGATATCAAAGACGGGTGTA+CGG | + | chr3.2:3785391-3785410 | MS.gene009476:CDS | 40.0% | |
| TGCCATTCCTAGTAGTATGA+AGG | - | chr3.2:3785166-3785185 | None:intergenic | 40.0% | |
| TTACACACAGCAGTTTCTGT+TGG | - | chr3.2:3784889-3784908 | None:intergenic | 40.0% | |
| TTAGATTGATGAGACTCCAC+AGG | - | chr3.2:3784958-3784977 | None:intergenic | 40.0% | |
| TTGTTTAACTGTTGAGCCTC+TGG | - | chr3.2:3785198-3785217 | None:intergenic | 40.0% | |
| ! | AGAGTTTTCCCGCCTTTTTT+AGG | + | chr3.2:3783734-3783753 | MS.gene009476:intron | 40.0% |
| ! | AGATCAACCTAAGTTGAAGG+AGG | + | chr3.2:3785905-3785924 | MS.gene009476:CDS | 40.0% |
| ! | CTTCCTTGCATTTTCATGCT+TGG | + | chr3.2:3785793-3785812 | MS.gene009476:CDS | 40.0% |
| ! | GCATTTTCATGCTTGGTCAA+AGG | + | chr3.2:3785800-3785819 | MS.gene009476:CDS | 40.0% |
| ! | GCTAGGATTGTTTAGGGTTT+AGG | + | chr3.2:3783689-3783708 | MS.gene009476:intron | 40.0% |
| ! | GGAAGTAAGCTTTTGATAGG+TGG | - | chr3.2:3785778-3785797 | None:intergenic | 40.0% |
| !! | CTTCTTGGTTTGCATGAAAG+AGG | + | chr3.2:3784228-3784247 | MS.gene009476:CDS | 40.0% |
| !! | GAGTTTTCCCGCCTTTTTTA+GGG | + | chr3.2:3783735-3783754 | MS.gene009476:intron | 40.0% |
| !! | GGCTAATTCATCAAGTTGAG+TGG | - | chr3.2:3783512-3783531 | None:intergenic | 40.0% |
| AAAGAGATCAGGCACCCAAA+GGG | - | chr3.2:3784569-3784588 | None:intergenic | 45.0% | |
| AAGAGATAAGGGTTTGCCTG+TGG | + | chr3.2:3784939-3784958 | MS.gene009476:CDS | 45.0% | |
| ACCCTGAACTCCAATACCAA+TGG | - | chr3.2:3785133-3785152 | None:intergenic | 45.0% | |
| ACCTTTCTGCAGTTTCGACT+GGG | - | chr3.2:3785092-3785111 | None:intergenic | 45.0% | |
| ACTAGGAGAGGTTACTTCTG+TGG | + | chr3.2:3785026-3785045 | MS.gene009476:CDS | 45.0% | |
| ACTGTGGAATCCTGCACTTA+AGG | + | chr3.2:3785578-3785597 | MS.gene009476:CDS | 45.0% | |
| AGTAAATCTGCTGGAGGGAT+TGG | + | chr3.2:3784298-3784317 | MS.gene009476:CDS | 45.0% | |
| ATTCTTCAGCCTGACATGTG+GGG | + | chr3.2:3785324-3785343 | MS.gene009476:CDS | 45.0% | |
| CAACTACTCAACTGAGGTCT+AGG | - | chr3.2:3784208-3784227 | None:intergenic | 45.0% | |
| CCCTGAACTCCAATACCAAT+GGG | - | chr3.2:3785132-3785151 | None:intergenic | 45.0% | |
| CGGGAGATGATATCAAAGAC+GGG | + | chr3.2:3785384-3785403 | MS.gene009476:CDS | 45.0% | |
| CTGCACGTTATGTTGATCAG+GGG | + | chr3.2:3784419-3784438 | MS.gene009476:CDS | 45.0% | |
| CTGCAGAAAGGTCAAACTTG+CGG | + | chr3.2:3785100-3785119 | MS.gene009476:CDS | 45.0% | |
| GAAAAGCAACCAGCAGAATC+TGG | + | chr3.2:3784813-3784832 | MS.gene009476:CDS | 45.0% | |
| GAATTCTTCAGCCTGACATG+TGG | + | chr3.2:3785322-3785341 | MS.gene009476:CDS | 45.0% | |
| GGCCCCTATGAAACTTATAG+CGG | + | chr3.2:3785282-3785301 | MS.gene009476:CDS | 45.0% | |
| GGTCAAAGGGTTTGAAGACT+GGG | + | chr3.2:3785814-3785833 | MS.gene009476:CDS | 45.0% | |
| TAAAGAGATCAGGCACCCAA+AGG | - | chr3.2:3784570-3784589 | None:intergenic | 45.0% | |
| TAATTGTGCCCAGATTCTGC+TGG | - | chr3.2:3784825-3784844 | None:intergenic | 45.0% | |
| TAGGGTTAGGGTTAGGGTTA+GGG | + | chr3.2:3783708-3783727 | MS.gene009476:intron | 45.0% | |
| TCATCTGCCTCCTTCAACTT+AGG | - | chr3.2:3785915-3785934 | None:intergenic | 45.0% | |
| TCCCTCCAATTTGTGGGATT+GGG | + | chr3.2:3785353-3785372 | MS.gene009476:CDS | 45.0% | |
| TGAGGACGATGATACCAAGA+TGG | + | chr3.2:3785944-3785963 | MS.gene009476:CDS | 45.0% | |
| TGATACCAAGATGGCACAGA+TGG | + | chr3.2:3785953-3785972 | MS.gene009476:CDS | 45.0% | |
| TGCACGTTATGTTGATCAGG+GGG | + | chr3.2:3784420-3784439 | MS.gene009476:CDS | 45.0% | |
| TGGTAGATGCAGTTGGCATA+GGG | - | chr3.2:3785434-3785453 | None:intergenic | 45.0% | |
| TGGTCAAAGGGTTTGAAGAC+TGG | + | chr3.2:3785813-3785832 | MS.gene009476:CDS | 45.0% | |
| TGTGACTCCCTCCAATTTGT+GGG | + | chr3.2:3785347-3785366 | MS.gene009476:CDS | 45.0% | |
| TTAGGGTTAGGGTTAGGGTT+AGG | + | chr3.2:3783707-3783726 | MS.gene009476:intron | 45.0% | |
| TTCCCCGAATGTAACTACCA+CGG | - | chr3.2:3784348-3784367 | None:intergenic | 45.0% | |
| TTGGGTGCCTGATCTCTTTA+TGG | + | chr3.2:3784570-3784589 | MS.gene009476:CDS | 45.0% | |
| TTGTTCAAGCACAGAGTCTG+TGG | + | chr3.2:3784722-3784741 | MS.gene009476:CDS | 45.0% | |
| ! | ACCCATTGGTATTGGAGTTC+AGG | + | chr3.2:3785128-3785147 | MS.gene009476:CDS | 45.0% |
| ! | ACTCCTACACTTTTCAACGC+CGG | + | chr3.2:3784178-3784197 | MS.gene009476:CDS | 45.0% |
| ! | AGGGTTTAGGGTTAGGGTTA+GGG | + | chr3.2:3783702-3783721 | MS.gene009476:intron | 45.0% |
| ! | AGGTTGATCTTCAATGGCAG+AGG | - | chr3.2:3785895-3785914 | None:intergenic | 45.0% |
| ! | CCCATTGGTATTGGAGTTCA+GGG | + | chr3.2:3785129-3785148 | MS.gene009476:CDS | 45.0% |
| ! | TACAATCGCAGAGTGCTAAG+TGG | + | chr3.2:3785504-3785523 | MS.gene009476:CDS | 45.0% |
| ! | TAGGGTTTAGGGTTAGGGTT+AGG | + | chr3.2:3783701-3783720 | MS.gene009476:intron | 45.0% |
| !! | ACCTGGTTTGGCAGATTGTT+GGG | + | chr3.2:3784642-3784661 | MS.gene009476:CDS | 45.0% |
| !! | AGGTGCTTTTGCTGTGTACT+TGG | + | chr3.2:3784456-3784475 | MS.gene009476:CDS | 45.0% |
| !! | TGTTGATTCAGTTGGCTGGT+AGG | + | chr3.2:3783825-3783844 | MS.gene009476:intron | 45.0% |
| ACCCAGTCGAAACTGCAGAA+AGG | + | chr3.2:3785088-3785107 | MS.gene009476:CDS | 50.0% | |
| ACCCCAATCCCACAAATTGG+AGG | - | chr3.2:3785358-3785377 | None:intergenic | 50.0% | |
| AGAGATGAGTGTACGTCCTG+TGG | + | chr3.2:3785993-3786012 | MS.gene009476:CDS | 50.0% | |
| AGCGGTAGTCCTGTAAGCAA+GGG | + | chr3.2:3785300-3785319 | MS.gene009476:CDS | 50.0% | |
| CAACTGAGGTCTAGGTGTTC+CGG | - | chr3.2:3784200-3784219 | None:intergenic | 50.0% | |
| CATCACTTGCAGCTCGTGTT+CGG | - | chr3.2:3785851-3785870 | None:intergenic | 50.0% | |
| CATGAAGAATGCGGCTCGAT+TGG | + | chr3.2:3783946-3783965 | MS.gene009476:CDS | 50.0% | |
| CCAAACCAGGTGCTTCATTG+GGG | - | chr3.2:3784633-3784652 | None:intergenic | 50.0% | |
| CCCCAATCCCACAAATTGGA+GGG | - | chr3.2:3785357-3785376 | None:intergenic | 50.0% | |
| CCCTCCAATTTGTGGGATTG+GGG | + | chr3.2:3785354-3785373 | MS.gene009476:CDS | 50.0% | |
| CTCCCTCCAATTTGTGGGAT+TGG | + | chr3.2:3785352-3785371 | MS.gene009476:CDS | 50.0% | |
| CTGGTAGATGCAGTTGGCAT+AGG | - | chr3.2:3785435-3785454 | None:intergenic | 50.0% | |
| GACCTTTCTGCAGTTTCGAC+TGG | - | chr3.2:3785093-3785112 | None:intergenic | 50.0% | |
| GCACGTTATGTTGATCAGGG+GGG | + | chr3.2:3784421-3784440 | MS.gene009476:CDS | 50.0% | |
| GCCAAACCAGGTGCTTCATT+GGG | - | chr3.2:3784634-3784653 | None:intergenic | 50.0% | |
| GCGGTAGTGCAATTGATGCA+AGG | - | chr3.2:3784912-3784931 | None:intergenic | 50.0% | |
| GGCAGATGATGCTGAGAATG+AGG | + | chr3.2:3785926-3785945 | MS.gene009476:CDS | 50.0% | |
| GGTAGATGCAGTTGGCATAG+GGG | - | chr3.2:3785433-3785452 | None:intergenic | 50.0% | |
| GGTGACGCCTTTATAAACGC+CGG | - | chr3.2:3783488-3783507 | None:intergenic | 50.0% | |
| GTGCCCGTGGTAGTTACATT+CGG | + | chr3.2:3784341-3784360 | MS.gene009476:CDS | 50.0% | |
| GTGTGACTCCCTCCAATTTG+TGG | + | chr3.2:3785346-3785365 | MS.gene009476:CDS | 50.0% | |
| TAGCGGTAGTCCTGTAAGCA+AGG | + | chr3.2:3785299-3785318 | MS.gene009476:CDS | 50.0% | |
| TCCCCGAATGTAACTACCAC+GGG | - | chr3.2:3784347-3784366 | None:intergenic | 50.0% | |
| TGCACCCCAATCCCACAAAT+TGG | - | chr3.2:3785361-3785380 | None:intergenic | 50.0% | |
| TGCATAATCGGGGTGGTTAG+CGG | - | chr3.2:3783557-3783576 | None:intergenic | 50.0% | |
| TGCCAAACCAGGTGCTTCAT+TGG | - | chr3.2:3784635-3784654 | None:intergenic | 50.0% | |
| TGCCCGTGGTAGTTACATTC+GGG | + | chr3.2:3784342-3784361 | MS.gene009476:CDS | 50.0% | |
| TGCTTCATTGGGGCAGAACA+GGG | - | chr3.2:3784623-3784642 | None:intergenic | 50.0% | |
| TTACGGATGCATAATCGGGG+TGG | - | chr3.2:3783564-3783583 | None:intergenic | 50.0% | |
| TTGCTGTGTACTTGGAGCCA+TGG | + | chr3.2:3784464-3784483 | MS.gene009476:CDS | 50.0% | |
| ! | GGAGCAGAGGCTCTAGTAAT+CGG | + | chr3.2:3784986-3785005 | MS.gene009476:CDS | 50.0% |
| ! | GTTCCGGCGTTGAAAAGTGT+AGG | - | chr3.2:3784184-3784203 | None:intergenic | 50.0% |
| ! | GTTTCGACAAGATAACGGCG+AGG | + | chr3.2:3783392-3783411 | MS.gene009476:CDS | 50.0% |
| ! | GTTTGCGCCGGCGTTTATAA+AGG | + | chr3.2:3783478-3783497 | MS.gene009476:CDS | 50.0% |
| !! | CACCTGGTTTGGCAGATTGT+TGG | + | chr3.2:3784641-3784660 | MS.gene009476:CDS | 50.0% |
| !! | CCTGGTTTGGCAGATTGTTG+GGG | + | chr3.2:3784643-3784662 | MS.gene009476:CDS | 50.0% |
| !! | TCTAAGCTTGTTGGGAGCAG+AGG | + | chr3.2:3784973-3784992 | MS.gene009476:CDS | 50.0% |
| AACTTGCGGCACAGACCCAT+TGG | + | chr3.2:3785114-3785133 | MS.gene009476:CDS | 55.0% | |
| ATGGAAAGAGCTCGGAGCGA+TGG | + | chr3.2:3784589-3784608 | MS.gene009476:CDS | 55.0% | |
| CCCCAACAATCTGCCAAACC+AGG | - | chr3.2:3784646-3784665 | None:intergenic | 55.0% | |
| CGGCACAGACCCATTGGTAT+TGG | + | chr3.2:3785120-3785139 | MS.gene009476:CDS | 55.0% | |
| CGTTATGTTGATCAGGGGGG+AGG | + | chr3.2:3784424-3784443 | MS.gene009476:CDS | 55.0% | |
| GAAGAGAGACGGTCGTCAAG+AGG | + | chr3.2:3783363-3783382 | MS.gene009476:CDS | 55.0% | |
| GCACACCATCTGTGCCATCT+TGG | - | chr3.2:3785961-3785980 | None:intergenic | 55.0% | |
| GCCCGTGGTAGTTACATTCG+GGG | + | chr3.2:3784343-3784362 | MS.gene009476:CDS | 55.0% | |
| GTCGCTCAGAAAGTTTGCGC+CGG | + | chr3.2:3783466-3783485 | MS.gene009476:CDS | 55.0% | |
| GTGCTTCATTGGGGCAGAAC+AGG | - | chr3.2:3784624-3784643 | None:intergenic | 55.0% | |
| GTTCACAACATACGTGCCCG+TGG | + | chr3.2:3784328-3784347 | MS.gene009476:CDS | 55.0% | |
| TGGAAAGAGCTCGGAGCGAT+GGG | + | chr3.2:3784590-3784609 | MS.gene009476:CDS | 55.0% | |
| TGTGGGATTGGGGTGCACTT+CGG | + | chr3.2:3785364-3785383 | MS.gene009476:CDS | 55.0% | |
| ! | CCCCAATGAAGCACCTGGTT+TGG | + | chr3.2:3784630-3784649 | MS.gene009476:CDS | 55.0% |
| ! | TTCTGCCCCAATGAAGCACC+TGG | + | chr3.2:3784625-3784644 | MS.gene009476:CDS | 55.0% |
| CACTTGCAGCTCGTGTTCGG+AGG | - | chr3.2:3785848-3785867 | None:intergenic | 60.0% | |
| GAGAGACGGTCGTCAAGAGG+CGG | + | chr3.2:3783366-3783385 | MS.gene009476:CDS | 60.0% | |
| GGAAAGAGCTCGGAGCGATG+GGG | + | chr3.2:3784591-3784610 | MS.gene009476:CDS | 60.0% | |
| GGAGTCACACCCCACATGTC+AGG | - | chr3.2:3785336-3785355 | None:intergenic | 60.0% | |
| GTGGGATTGGGGTGCACTTC+GGG | + | chr3.2:3785365-3785384 | MS.gene009476:CDS | 60.0% | |
| TTAGCCGCTGAAACCGCTGC+CGG | + | chr3.2:3783526-3783545 | MS.gene009476:CDS | 60.0% | |
| TTGATCAGGGGGGAGGCAAG+AGG | + | chr3.2:3784431-3784450 | MS.gene009476:CDS | 60.0% | |
| CAGGGGGGAGGCAAGAGGAA+AGG | + | chr3.2:3784436-3784455 | MS.gene009476:CDS | 65.0% | |
| CATGCCGGCAGCGGTTTCAG+CGG | - | chr3.2:3783533-3783552 | None:intergenic | 65.0% | |
| GAGCTCGGAGCGATGGGGAA+TGG | + | chr3.2:3784596-3784615 | MS.gene009476:CDS | 65.0% | |
| GGGGTGGTTAGCGGTCATGC+CGG | - | chr3.2:3783548-3783567 | None:intergenic | 65.0% | |
| GTTAGCGGTCATGCCGGCAG+CGG | - | chr3.2:3783542-3783561 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 3783352 | 3786022 | 3783352 | ID=MS.gene009476 |
| chr3.2 | mRNA | 3783352 | 3786022 | 3783352 | ID=MS.gene009476.t1;Parent=MS.gene009476 |
| chr3.2 | exon | 3783352 | 3783579 | 3783352 | ID=MS.gene009476.t1.exon1;Parent=MS.gene009476.t1 |
| chr3.2 | CDS | 3783352 | 3783579 | 3783352 | ID=cds.MS.gene009476.t1;Parent=MS.gene009476.t1 |
| chr3.2 | exon | 3783836 | 3786022 | 3783836 | ID=MS.gene009476.t1.exon2;Parent=MS.gene009476.t1 |
| chr3.2 | CDS | 3783836 | 3786022 | 3783836 | ID=cds.MS.gene009476.t1;Parent=MS.gene009476.t1 |
| Gene Sequence |
| Protein sequence |
