AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92155

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92155.t1 MTR_2g066050 98.853 436 5 0 1 436 1 436 0.0 891
MS.gene92155.t1 MTR_6g082080 46.419 377 193 4 53 427 10 379 1.23e-107 325
MS.gene92155.t1 MTR_7g056830 46.684 377 192 4 53 427 10 379 1.63e-107 325
MS.gene92155.t1 MTR_4g077370 75.635 197 48 0 53 249 250 446 7.05e-102 311
MS.gene92155.t1 MTR_4g077370 68.018 222 47 4 53 269 2 204 7.80e-95 293
MS.gene92155.t1 MTR_5g069330 38.032 376 209 7 53 423 3 359 1.12e-72 234
MS.gene92155.t1 MTR_5g069330 38.032 376 209 7 53 423 7 363 1.20e-72 234
MS.gene92155.t1 MTR_3g467550 37.296 429 236 11 9 415 71 488 8.43e-70 231
MS.gene92155.t1 MTR_3g467550 40.113 354 195 7 75 415 108 457 1.18e-68 227
MS.gene92155.t1 MTR_3g049990 39.118 363 214 4 53 411 152 511 2.89e-68 231
MS.gene92155.t1 MTR_2g041140 39.835 364 211 5 53 411 141 501 9.43e-67 227
MS.gene92155.t1 MTR_2g100230 35.405 370 228 5 53 416 96 460 1.27e-66 221
MS.gene92155.t1 MTR_7g109720 37.057 367 217 7 53 411 232 592 2.10e-64 221
MS.gene92155.t1 MTR_3g083690 34.091 396 237 6 41 416 133 524 9.31e-63 214
MS.gene92155.t1 MTR_1g095810 34.521 365 218 5 53 403 145 502 1.26e-58 202
MS.gene92155.t1 MTR_4g134170 32.990 388 229 5 53 415 287 668 4.54e-58 202
MS.gene92155.t1 MTR_6g005320 33.247 388 226 6 53 415 249 628 8.45e-58 201
MS.gene92155.t1 MTR_2g039960 34.072 361 231 4 53 412 41 395 8.62e-58 196
MS.gene92155.t1 MTR_1g026830 33.604 369 222 6 53 406 147 507 9.61e-58 200
MS.gene92155.t1 MTR_4g079320 35.659 387 239 7 54 436 20 400 1.04e-57 203
MS.gene92155.t1 MTR_4g125970 32.031 384 254 4 31 412 17 395 1.16e-57 195
MS.gene92155.t1 MTR_1g054630 32.170 401 247 6 36 416 137 532 1.36e-57 200
MS.gene92155.t1 MTR_4g125970 32.031 384 254 4 31 412 34 412 2.08e-57 195
MS.gene92155.t1 MTR_3g467550 36.154 390 216 11 9 376 71 449 5.08e-57 195
MS.gene92155.t1 MTR_4g105100 31.830 377 246 5 53 423 202 573 1.44e-56 197
MS.gene92155.t1 MTR_2g099620 34.072 361 231 3 53 412 25 379 2.40e-56 191
MS.gene92155.t1 MTR_2g099620 34.072 361 231 3 53 412 41 395 3.39e-56 191
MS.gene92155.t1 MTR_5g027840 32.997 397 247 6 26 411 79 467 1.35e-55 192
MS.gene92155.t1 MTR_8g018400 33.333 369 239 3 53 420 41 403 1.37e-55 190
MS.gene92155.t1 MTR_1g022305 33.929 392 189 10 53 440 3 328 1.41e-55 191
MS.gene92155.t1 MTR_4g112340 33.957 374 229 8 65 428 109 474 1.03e-54 191
MS.gene92155.t1 MTR_7g076820 31.937 382 243 6 48 422 141 512 1.27e-54 190
MS.gene92155.t1 MTR_7g076830 31.414 382 245 6 48 422 134 505 2.97e-54 189
MS.gene92155.t1 MTR_7g076800 31.414 382 245 6 48 422 132 503 3.98e-54 188
MS.gene92155.t1 MTR_4g114120 33.676 389 226 9 64 426 154 536 4.94e-54 191
MS.gene92155.t1 MTR_2g055850 34.435 363 216 8 50 400 88 440 9.17e-54 188
MS.gene92155.t1 MTR_1g012420 31.183 372 243 8 51 416 45 409 1.02e-53 185
MS.gene92155.t1 MTR_2g007000 34.140 372 228 7 53 412 504 870 1.38e-53 193
MS.gene92155.t1 MTR_2g032630 34.759 374 220 9 53 412 496 859 2.40e-53 192
MS.gene92155.t1 MTR_3g107420 31.720 372 241 8 51 416 45 409 1.37e-52 182
MS.gene92155.t1 MTR_3g449250 34.783 368 222 7 54 412 91 449 3.14e-52 184
MS.gene92155.t1 MTR_3g449250 34.783 368 222 7 54 412 91 449 4.22e-52 184
MS.gene92155.t1 MTR_2g438110 30.027 373 248 4 52 420 33 396 7.15e-52 180
MS.gene92155.t1 MTR_4g010565 31.183 372 243 9 51 416 122 486 1.59e-51 181
MS.gene92155.t1 MTR_7g057250 30.549 455 232 10 24 401 133 580 2.16e-51 185
MS.gene92155.t1 MTR_5g090120 34.511 368 223 8 54 412 82 440 6.05e-51 181
MS.gene92155.t1 MTR_6g005550 31.759 381 232 10 53 417 165 533 3.45e-50 181
MS.gene92155.t1 MTR_5g092560 34.731 334 196 9 77 397 100 424 8.14e-48 175
MS.gene92155.t1 MTR_6g033070 30.233 387 250 7 53 424 140 521 7.00e-47 169
MS.gene92155.t1 MTR_4g068990 33.238 349 210 10 78 413 101 439 2.38e-46 171
MS.gene92155.t1 MTR_4g059460 28.511 470 247 12 35 424 26 486 6.67e-45 165
MS.gene92155.t1 MTR_8g027780 31.302 361 234 5 54 400 107 467 3.39e-43 160
MS.gene92155.t1 MTR_2g043360 29.186 442 227 11 51 412 39 474 3.42e-43 160
MS.gene92155.t1 MTR_8g027775 30.939 362 234 6 54 400 103 463 3.56e-43 160
MS.gene92155.t1 MTR_6g039840 32.487 394 237 11 52 422 109 496 3.76e-43 161
MS.gene92155.t1 MTR_8g027770 28.710 411 262 7 50 429 198 608 9.16e-43 160
MS.gene92155.t1 MTR_8g097000 30.159 378 244 7 54 414 289 663 2.53e-41 156
MS.gene92155.t1 MTR_4g105100 31.077 325 213 5 53 371 202 521 9.93e-41 152
MS.gene92155.t1 MTR_1g083130 28.606 409 244 8 53 415 26 432 2.79e-40 152
MS.gene92155.t1 MTR_7g100820 30.000 350 234 7 69 415 150 491 4.81e-40 152
MS.gene92155.t1 MTR_4g112320 32.895 304 187 7 129 428 2 292 1.74e-39 146
MS.gene92155.t1 MTR_8g032230 47.020 151 77 2 53 202 10 158 8.09e-39 138
MS.gene92155.t1 MTR_3g071620 31.579 380 227 8 46 397 7 381 1.30e-38 147
MS.gene92155.t1 MTR_6g056080 35.503 338 192 10 78 399 128 455 1.83e-38 148
MS.gene92155.t1 MTR_5g077690 30.831 373 188 11 98 405 78 445 1.35e-37 143
MS.gene92155.t1 MTR_2g063080 26.850 473 278 10 15 429 77 539 2.69e-37 143
MS.gene92155.t1 MTR_4g049910 30.296 406 245 14 24 408 28 416 4.87e-36 138
MS.gene92155.t1 MTR_8g027780 30.606 330 215 5 54 369 107 436 1.52e-35 137
MS.gene92155.t1 MTR_1g061970 31.111 405 246 13 24 400 50 449 4.43e-35 136
MS.gene92155.t1 MTR_0915s0010 29.514 288 190 5 69 353 5 282 2.48e-34 129
MS.gene92155.t1 MTR_1g102410 31.217 378 218 9 54 399 45 412 7.73e-34 134
MS.gene92155.t1 MTR_8g018370 29.429 333 207 5 83 414 3 308 1.02e-32 126
MS.gene92155.t1 MTR_1g046570 26.485 404 239 9 71 430 9 398 1.48e-30 122
MS.gene92155.t1 MTR_6g039840 32.803 314 191 9 123 422 13 320 4.95e-30 122
MS.gene92155.t1 MTR_3g118120 27.708 397 239 14 53 411 132 518 7.64e-29 119
MS.gene92155.t1 MTR_4g459350 31.405 242 138 5 35 250 23 262 5.53e-27 109
MS.gene92155.t1 MTR_8g042690 25.706 354 231 9 78 413 43 382 1.49e-26 111
MS.gene92155.t1 MTR_3g107420 30.986 213 139 5 51 259 45 253 5.77e-24 102
MS.gene92155.t1 MTR_2g043360 27.027 333 165 8 152 412 30 356 6.00e-24 104
MS.gene92155.t1 MTR_4g068990 33.921 227 133 8 196 413 10 228 1.19e-23 103
MS.gene92155.t1 MTR_5g092560 35.545 211 120 7 196 397 10 213 1.38e-23 103
MS.gene92155.t1 MTR_4g131750 28.451 355 212 12 68 389 97 442 3.28e-22 99.4
MS.gene92155.t1 MTR_8g079462 33.333 147 92 2 262 405 118 261 4.21e-19 88.2
MS.gene92155.t1 MTR_1g009617 41.228 114 65 1 323 436 171 282 5.91e-19 89.0
MS.gene92155.t1 MTR_1g009617 33.077 130 84 1 76 202 6 135 4.22e-12 67.8
MS.gene92155.t1 MTR_1g023070 40.000 110 64 1 323 432 30 137 4.99e-17 79.0
MS.gene92155.t1 MTR_1g023070 40.000 110 64 1 323 432 30 137 1.26e-16 78.6
MS.gene92155.t1 MTR_2g031570 53.968 63 29 0 53 115 72 134 3.61e-15 72.8
MS.gene92155.t1 MTR_8g079452 40.506 79 44 1 328 406 18 93 5.01e-14 68.6
MS.gene92155.t1 MTR_0427s0010 30.531 226 105 10 211 413 1 197 6.20e-13 68.6
MS.gene92155.t1 MTR_8g062720 35.772 123 74 2 290 408 425 546 1.39e-12 70.1
MS.gene92155.t1 MTR_8g062720 26.667 225 152 5 53 264 91 315 3.07e-11 65.9
MS.gene92155.t1 MTR_2g082350 57.627 59 16 2 318 376 1 50 1.52e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92155.t1 AT1G16280 68.031 391 122 2 31 420 38 426 0.0 555
MS.gene92155.t1 AT5G60990 44.697 396 202 3 53 436 10 400 1.12e-109 331
MS.gene92155.t1 AT4G16630 37.433 374 223 4 53 420 168 536 5.55e-66 226
MS.gene92155.t1 AT1G55150 34.324 370 232 5 53 416 100 464 2.27e-65 218
MS.gene92155.t1 AT1G55150 34.324 370 232 5 53 416 125 489 5.46e-65 218
MS.gene92155.t1 AT2G47330 38.692 367 211 7 53 411 229 589 5.61e-65 223
MS.gene92155.t1 AT5G63120 34.574 376 233 5 54 422 167 536 9.04e-64 216
MS.gene92155.t1 AT2G33730 32.990 388 229 4 53 415 314 695 3.92e-61 211
MS.gene92155.t1 AT3G18600 34.177 395 246 6 50 435 87 476 7.41e-61 207
MS.gene92155.t1 AT3G58510 34.375 384 225 9 53 416 152 528 1.24e-60 208
MS.gene92155.t1 AT3G58510 34.375 384 225 9 53 416 152 528 1.24e-60 208
MS.gene92155.t1 AT3G58510 34.375 384 225 9 53 416 152 528 1.24e-60 208
MS.gene92155.t1 AT2G42520 34.398 407 237 9 41 424 148 547 1.28e-60 208
MS.gene92155.t1 AT2G42520 34.398 407 237 9 41 424 148 547 1.28e-60 208
MS.gene92155.t1 AT2G42520 34.398 407 237 9 41 424 148 547 1.28e-60 208
MS.gene92155.t1 AT3G58570 32.297 418 248 8 28 416 114 525 1.10e-59 206
MS.gene92155.t1 AT1G31970 32.982 379 238 4 34 401 98 471 1.48e-59 203
MS.gene92155.t1 AT1G77030 35.567 388 238 7 54 436 30 410 1.45e-58 206
MS.gene92155.t1 AT5G51280 35.792 366 212 8 53 403 147 504 1.74e-58 202
MS.gene92155.t1 AT4G33370 34.688 369 220 6 53 407 98 459 1.26e-57 198
MS.gene92155.t1 AT1G20920 34.501 371 226 7 54 412 193 558 1.71e-57 203
MS.gene92155.t1 AT3G13920 33.333 369 239 3 45 412 22 384 1.46e-56 192
MS.gene92155.t1 AT3G13920 33.333 369 239 3 45 412 32 394 2.14e-56 192
MS.gene92155.t1 AT1G20920 34.232 371 227 7 54 412 531 896 3.09e-56 201
MS.gene92155.t1 AT1G20920 34.232 371 227 7 54 412 531 896 3.09e-56 201
MS.gene92155.t1 AT1G20920 34.232 371 227 7 54 412 531 896 3.09e-56 201
MS.gene92155.t1 AT1G20920 34.232 371 227 7 54 412 531 896 3.09e-56 201
MS.gene92155.t1 AT1G20920 34.232 371 227 7 54 412 531 896 3.09e-56 201
MS.gene92155.t1 AT1G20920 34.232 371 227 7 54 412 531 896 3.09e-56 201
MS.gene92155.t1 AT2G45810 32.967 364 227 6 48 404 146 499 4.98e-56 194
MS.gene92155.t1 AT4G00660 31.414 382 245 6 48 422 123 494 5.31e-56 193
MS.gene92155.t1 AT4G00660 31.414 382 245 6 48 422 123 494 5.31e-56 193
MS.gene92155.t1 AT5G65900 33.590 390 247 6 50 432 152 536 8.11e-56 195
MS.gene92155.t1 AT3G13920 33.795 361 232 3 45 404 32 386 1.01e-55 190
MS.gene92155.t1 AT3G13920 33.795 361 232 3 45 404 36 390 1.10e-55 190
MS.gene92155.t1 AT3G19760 30.831 373 245 4 52 420 35 398 1.13e-55 190
MS.gene92155.t1 AT1G54270 32.732 388 244 4 34 412 15 394 4.41e-55 188
MS.gene92155.t1 AT3G13920 33.333 369 234 4 45 412 32 389 6.98e-55 188
MS.gene92155.t1 AT1G72730 32.620 374 245 3 40 412 29 396 8.15e-55 188
MS.gene92155.t1 AT3G61240 32.486 354 226 5 54 404 126 469 1.07e-54 189
MS.gene92155.t1 AT3G61240 32.486 354 226 5 54 404 126 469 1.07e-54 189
MS.gene92155.t1 AT3G22310 35.389 373 215 9 53 412 117 476 1.32e-54 191
MS.gene92155.t1 AT3G22310 35.389 373 215 9 53 412 117 476 1.68e-54 191
MS.gene92155.t1 AT1G54270 32.732 388 239 5 34 412 15 389 1.56e-53 184
MS.gene92155.t1 AT1G51380 30.471 361 244 3 53 412 23 377 5.05e-53 182
MS.gene92155.t1 AT3G01540 33.947 380 225 9 53 417 159 527 6.76e-53 187
MS.gene92155.t1 AT3G01540 33.947 380 225 9 53 417 159 527 6.76e-53 187
MS.gene92155.t1 AT3G01540 33.947 380 225 9 53 417 159 527 6.76e-53 187
MS.gene92155.t1 AT3G01540 33.947 380 225 9 53 417 159 527 6.93e-53 187
MS.gene92155.t1 AT3G22330 33.333 366 228 7 55 412 107 464 1.05e-52 187
MS.gene92155.t1 AT5G14610 34.400 375 220 9 53 412 162 525 1.64e-52 187
MS.gene92155.t1 AT5G14610 34.400 375 220 9 53 412 162 525 1.81e-52 186
MS.gene92155.t1 AT5G14610 34.400 375 220 9 53 412 170 533 2.39e-52 186
MS.gene92155.t1 AT5G26742 35.655 359 210 7 76 422 34 383 2.64e-52 186
MS.gene92155.t1 AT5G26742 35.294 357 211 6 78 422 128 476 3.38e-52 187
MS.gene92155.t1 AT5G26742 35.294 357 211 6 78 422 128 476 3.41e-52 187
MS.gene92155.t1 AT5G14610 35.294 357 205 9 71 412 49 394 6.58e-52 182
MS.gene92155.t1 AT5G14610 35.294 357 205 9 71 412 49 394 6.58e-52 182
MS.gene92155.t1 AT5G14610 35.294 357 205 9 71 412 248 593 3.86e-51 184
MS.gene92155.t1 AT5G11170 30.645 372 245 8 51 416 45 409 2.05e-50 176
MS.gene92155.t1 AT5G11200 30.645 372 245 8 51 416 45 409 2.05e-50 176
MS.gene92155.t1 AT3G09620 33.423 371 201 9 54 412 399 735 2.18e-50 184
MS.gene92155.t1 AT3G09620 33.423 371 201 9 54 412 398 734 2.30e-50 184
MS.gene92155.t1 AT3G06480 34.474 380 213 10 53 412 436 799 4.44e-50 183
MS.gene92155.t1 AT1G28180 35.224 335 200 5 82 407 3 329 2.30e-47 167
MS.gene92155.t1 AT3G16840 29.647 425 225 8 52 405 190 611 4.05e-47 174
MS.gene92155.t1 AT3G16840 29.647 425 225 8 52 405 191 612 4.27e-47 174
MS.gene92155.t1 AT5G63630 32.031 384 242 8 34 400 35 416 9.34e-47 169
MS.gene92155.t1 AT5G63120 34.395 314 193 5 54 360 167 474 8.52e-46 165
MS.gene92155.t1 AT5G63120 34.395 314 193 5 54 360 167 474 8.52e-46 165
MS.gene92155.t1 AT5G63120 34.395 314 193 5 54 360 167 474 8.52e-46 165
MS.gene92155.t1 AT5G63120 34.395 314 193 5 54 360 167 474 9.38e-46 165
MS.gene92155.t1 AT3G02065 30.673 401 257 8 53 438 111 505 1.83e-45 165
MS.gene92155.t1 AT3G02065 30.673 401 257 8 53 438 111 505 1.83e-45 165
MS.gene92155.t1 AT5G63630 32.031 384 242 8 34 400 229 610 2.81e-45 167
MS.gene92155.t1 AT5G11200 29.024 410 243 13 51 416 45 450 5.64e-45 163
MS.gene92155.t1 AT5G08620 29.684 411 271 7 7 400 33 442 2.36e-43 160
MS.gene92155.t1 AT5G11170 30.816 331 216 8 92 416 3 326 3.38e-43 155
MS.gene92155.t1 AT3G02065 31.099 373 236 8 81 438 2 368 4.49e-43 155
MS.gene92155.t1 AT5G08610 30.366 382 251 6 34 400 363 744 1.30e-41 158
MS.gene92155.t1 AT3G09720 30.203 394 241 11 55 435 144 516 1.50e-41 155
MS.gene92155.t1 AT3G09720 30.203 394 241 11 55 435 144 516 1.50e-41 155
MS.gene92155.t1 AT1G71370 31.606 386 239 11 43 408 1 381 2.29e-41 155
MS.gene92155.t1 AT2G40700 29.864 442 228 12 50 412 28 466 8.42e-41 154
MS.gene92155.t1 AT5G11200 27.804 428 243 13 51 416 45 468 4.65e-40 150
MS.gene92155.t1 AT5G54910 32.520 369 232 9 54 412 73 434 5.64e-40 152
MS.gene92155.t1 AT2G07750 28.191 376 255 6 54 414 377 752 1.00e-39 152
MS.gene92155.t1 AT1G63250 28.232 379 251 7 54 414 330 705 6.51e-39 150
MS.gene92155.t1 AT5G05450 31.496 381 231 9 42 397 4 379 1.28e-38 147
MS.gene92155.t1 AT5G14610 32.931 331 198 9 53 372 170 487 1.97e-38 145
MS.gene92155.t1 AT5G62190 34.024 338 197 8 78 399 122 449 5.75e-38 146
MS.gene92155.t1 AT4G09730 30.871 379 237 7 54 412 114 487 6.71e-38 145
MS.gene92155.t1 AT4G34910 27.033 455 254 9 53 436 47 494 1.19e-36 142
MS.gene92155.t1 AT3G06480 32.378 349 200 11 40 369 421 752 2.26e-35 139
MS.gene92155.t1 AT1G12770 25.170 441 271 9 46 430 104 541 7.42e-35 136
MS.gene92155.t1 AT1G12770 25.170 441 271 9 46 430 104 541 7.42e-35 136
MS.gene92155.t1 AT3G53110 28.873 426 265 15 29 428 68 481 1.78e-34 134
MS.gene92155.t1 AT4G15850 27.273 385 206 9 98 417 81 456 7.59e-33 130
MS.gene92155.t1 AT3G06980 29.293 396 244 10 53 418 375 764 2.73e-32 130
MS.gene92155.t1 AT1G51380 28.346 254 175 3 53 305 23 270 3.49e-27 110
MS.gene92155.t1 AT1G51380 30.457 197 134 1 53 249 23 216 2.56e-26 108
MS.gene92155.t1 AT1G51380 30.457 197 134 1 53 249 23 216 4.83e-26 107
MS.gene92155.t1 AT1G71280 29.619 341 188 10 43 363 1 309 7.07e-26 107
MS.gene92155.t1 AT1G71280 29.446 343 190 10 43 365 1 311 9.63e-26 109
MS.gene92155.t1 AT5G19210 24.146 439 278 14 12 404 23 452 2.63e-18 87.4
MS.gene92155.t1 AT1G28180 42.056 107 54 1 83 181 4 110 5.00e-15 71.6
MS.gene92155.t1 AT1G59990 25.888 197 133 5 228 416 352 543 5.77e-12 68.2
MS.gene92155.t1 AT1G59990 25.888 197 133 5 228 416 352 543 6.70e-12 67.8

Find 103 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTTGGCGGAGCAGTTT+AGG 0.203700 2.4:-27822218 MS.gene92155:CDS
GTTGCACATCTTGTCTAAAA+TGG 0.208237 2.4:-27820924 MS.gene92155:CDS
AATGGGAAGTGAAGGGTTTA+TGG 0.245410 2.4:+27822554 None:intergenic
TTTCAAGTTGCCTTTCAATA+AGG 0.261004 2.4:+27817410 None:intergenic
GCGAAAACCGGAGCAATTTC+AGG 0.269457 2.4:+27822054 None:intergenic
GTTTGAAGAGTGGAAAATTT+TGG 0.293741 2.4:+27822592 None:intergenic
CTTGTCTAAAATGGAAGATA+TGG 0.293998 2.4:-27820915 MS.gene92155:CDS
TGCTACTCCTGGGAGGATTA+AGG 0.296531 2.4:-27822094 MS.gene92155:CDS
GGTCCTTTCTCTCATGAAAA+AGG 0.339350 2.4:-27817365 MS.gene92155:intron
TTGGTTCGTCGCTTCGGCTT+CGG 0.344544 2.4:-27822191 MS.gene92155:CDS
TTCAAGTTGCCTTTCAATAA+GGG 0.355499 2.4:+27817411 None:intergenic
TTTCATTCCGAGTTCTTTGC+AGG 0.360550 2.4:+27822422 None:intergenic
AGCACTTCATGACTTTAAAT+CGG 0.371006 2.4:-27819734 MS.gene92155:CDS
CATCTTGTTATTGCTACTCC+TGG 0.382122 2.4:-27822105 MS.gene92155:CDS
AAATGGAAGATATGGGTATT+AGG 0.391277 2.4:-27820907 MS.gene92155:CDS
TGCATCCCTCAAATTCTATC+TGG 0.393799 2.4:-27822375 MS.gene92155:CDS
AGAATGATGTTGATCTCATT+CGG 0.393814 2.4:-27817444 MS.gene92155:CDS
TCAGTTGGCGGAGCAGTTTA+GGG 0.394651 2.4:-27822217 MS.gene92155:CDS
TGATGTTGCTGGCCGTGGTC+TGG 0.400189 2.4:-27819686 MS.gene92155:CDS
CGAGCTTGCGTTTCAGTTGG+CGG 0.403149 2.4:-27822229 MS.gene92155:CDS
CTTCGGATTGCCGTTGTTGT+TGG 0.414090 2.4:-27822174 MS.gene92155:CDS
CCGATCTCGGCCTCTCCGAA+TGG 0.414855 2.4:-27822455 MS.gene92155:CDS
CTATCTGGCCGTCACGTGAT+TGG 0.415877 2.4:-27822360 MS.gene92155:CDS
TGCCGTTGTTGTTGGTGGTA+TGG 0.419013 2.4:-27822166 MS.gene92155:CDS
CGATCTCGGCCTCTCCGAAT+GGG 0.425777 2.4:-27822454 MS.gene92155:CDS
GGTTGAAAATCTTAAGCAAC+AGG 0.429158 2.4:-27820984 MS.gene92155:CDS
TTCAGTGCTTACCAGAAAAC+CGG 0.435141 2.4:-27821111 MS.gene92155:CDS
CGGCTTGCTGAACATACGTT+TGG 0.437035 2.4:-27822282 MS.gene92155:CDS
GTGATTGGAATCGACGAGAC+TGG 0.442281 2.4:-27822345 MS.gene92155:CDS
TTTATATTCATTCAGATCAC+AGG 0.452733 2.4:-27819770 MS.gene92155:CDS
TCAGCAAGCCGCTGCAGAAT+CGG 0.452951 2.4:+27822294 None:intergenic
GGGCGCTTGGTTCGTCGCTT+CGG 0.454696 2.4:-27822197 MS.gene92155:CDS
GCGGAGCAGTTTAGGGCGCT+TGG 0.455704 2.4:-27822210 MS.gene92155:CDS
GCGCGAGCTTGCGTTTCAGT+TGG 0.456167 2.4:-27822232 MS.gene92155:CDS
CGCTTTGAGCCTTGTTACCC+AGG 0.459600 2.4:-27819476 MS.gene92155:intron
GCACTTCATGACTTTAAATC+GGG 0.464876 2.4:-27819733 MS.gene92155:CDS
ACATCAGTTGCTAGTAATAC+AGG 0.466128 2.4:+27819703 None:intergenic
ACCTTAGTCCTAGCGAAAAC+CGG 0.466218 2.4:+27822042 None:intergenic
GAATGATGTTGATCTCATTC+GGG 0.473257 2.4:-27817443 MS.gene92155:CDS
GCAACTGATGTTGCTGGCCG+TGG 0.474774 2.4:-27819691 MS.gene92155:CDS
TTACTAGCAACTGATGTTGC+TGG 0.478835 2.4:-27819697 MS.gene92155:CDS
CGGATTGCCGTTGTTGTTGG+TGG 0.480156 2.4:-27822171 MS.gene92155:CDS
ATCTTGTTATTGCTACTCCT+GGG 0.483585 2.4:-27822104 MS.gene92155:CDS
TCATCGTTTAAATTTAATGC+TGG 0.487305 2.4:-27819818 MS.gene92155:CDS
TTGTCTAAAATGGAAGATAT+GGG 0.493223 2.4:-27820914 MS.gene92155:CDS
ACACGATGGATATAATCTCT+TGG 0.493233 2.4:+27819532 None:intergenic
TTACGAGATGGTTTGAAGAG+TGG 0.494379 2.4:+27822582 None:intergenic
CGAGACTGGAAGCGGTAAAA+CGG 0.503304 2.4:-27822331 MS.gene92155:CDS
GTTTGGTGTGTTTGCGCTTG+TGG 0.507096 2.4:-27822265 MS.gene92155:CDS
TATGCCTTCGAAGCTTATGA+AGG 0.507189 2.4:-27821016 MS.gene92155:CDS
TGACGGCCAGATAGAATTTG+AGG 0.519220 2.4:+27822369 None:intergenic
AGCAAAACCTTAATCCTCCC+AGG 0.524605 2.4:+27822087 None:intergenic
GGATAATCCTGAAATTGCTC+CGG 0.527134 2.4:-27822061 MS.gene92155:CDS
TTTATGGAGGGTTTACGAGA+TGG 0.536928 2.4:+27822570 None:intergenic
TCATGACTTTAAATCGGGAA+AGG 0.537190 2.4:-27819728 MS.gene92155:CDS
ACCGCCACATTCTCCGATCT+CGG 0.539623 2.4:-27822468 MS.gene92155:CDS
TCGTCTTTGTCTCCACATGC+AGG 0.541124 2.4:-27820877 MS.gene92155:intron
AAACCCTTCATAAGCTTCGA+AGG 0.541221 2.4:+27821012 None:intergenic
TTATCAATTATGATGTTCCA+AGG 0.541234 2.4:-27819642 MS.gene92155:intron
AAAGGTGAGATATATTAAAG+TGG 0.543356 2.4:-27816819 MS.gene92155:intron
AGACTAAAGAGTTGGTTGCT+AGG 0.545898 2.4:-27822131 MS.gene92155:CDS
TTATTGGAAATGGGAAGTGA+AGG 0.547016 2.4:+27822546 None:intergenic
TATTGGAAATGGGAAGTGAA+GGG 0.547907 2.4:+27822547 None:intergenic
GCTTAGACAGACTAAAGAGT+TGG 0.550278 2.4:-27822139 MS.gene92155:CDS
GGGAAGTGAAGGGTTTATGG+AGG 0.555881 2.4:+27822557 None:intergenic
GCAGATCGAGTCCTGGATGT+TGG 0.556533 2.4:-27821160 MS.gene92155:CDS
CTGAAACGCAAGCTCGCGCG+TGG 0.558734 2.4:+27822236 None:intergenic
GGAAGTGAAGGGTTTATGGA+GGG 0.560177 2.4:+27822558 None:intergenic
GGAATCGACGAGACTGGAAG+CGG 0.560466 2.4:-27822339 MS.gene92155:CDS
CCATTCGGAGAGGCCGAGAT+CGG 0.564343 2.4:+27822455 None:intergenic
TTGCTCTTACCTGGGTAACA+AGG 0.566935 2.4:+27819467 None:intergenic
GTTGGTCGTACTGCAAGAGC+AGG 0.570495 2.4:-27819511 MS.gene92155:CDS
CGTACTGCAAGAGCAGGTAG+AGG 0.571058 2.4:-27819505 MS.gene92155:CDS
AGCTTATGAAGGGTTTAAGA+CGG 0.571635 2.4:-27821005 MS.gene92155:CDS
GAGATCGGAGAATGTGGCGG+TGG 0.572617 2.4:+27822470 None:intergenic
GGATGAAGCAGATCGAGTCC+TGG 0.573766 2.4:-27821167 MS.gene92155:CDS
GATTGAATACAAAGAAAATG+AGG 0.578047 2.4:-27817386 MS.gene92155:CDS
GACGGCCAGATAGAATTTGA+GGG 0.579456 2.4:+27822370 None:intergenic
TTGCGCTTCCGATTCTGCAG+CGG 0.588434 2.4:-27822302 MS.gene92155:CDS
TTGATAACAAGGTCAACTGT+AGG 0.593803 2.4:+27819658 None:intergenic
AAATAGAGACCCTTATTGAA+AGG 0.594933 2.4:-27817420 MS.gene92155:CDS
ATGCCTTCGAAGCTTATGAA+GGG 0.599933 2.4:-27821015 MS.gene92155:CDS
GAGGCCGAGATCGGAGAATG+TGG 0.601311 2.4:+27822464 None:intergenic
GTACTGCAAGAGCAGGTAGA+GGG 0.607328 2.4:-27819504 MS.gene92155:CDS
TTGTTATTGCTACTCCTGGG+AGG 0.607331 2.4:-27822101 MS.gene92155:CDS
ATCCATACCACCAACAACAA+CGG 0.609299 2.4:+27822164 None:intergenic
CAGTGTTGTTGCACGCGCCG+TGG 0.612619 2.4:+27822396 None:intergenic
CATCCTGAAAACCAACATCC+AGG 0.615336 2.4:+27821149 None:intergenic
AGAGATTATATCCATCGTGT+TGG 0.616654 2.4:-27819529 MS.gene92155:CDS
GAACATCATAATTGATAACA+AGG 0.620825 2.4:+27819647 None:intergenic
CATTCAGATCACAGGCTCAG+AGG 0.620865 2.4:-27819762 MS.gene92155:CDS
TCTCGGCCTCTCCGAATGGG+CGG 0.638497 2.4:-27822451 MS.gene92155:CDS
GGAGTAGCAATAACAAGATG+CGG 0.638527 2.4:+27822108 None:intergenic
TACTGCAAGAGCAGGTAGAG+GGG 0.643242 2.4:-27819503 MS.gene92155:CDS
ACTGCAAGAGCAGGTAGAGG+GGG 0.650965 2.4:-27819502 MS.gene92155:CDS
AACTCGGAATGAAAACTCCA+CGG 0.661336 2.4:-27822413 MS.gene92155:CDS
TCTAGAAAGATACCTGCATG+TGG 0.663823 2.4:+27820865 None:intergenic
TGAAACGCAAGCTCGCGCGT+GGG 0.665497 2.4:+27822237 None:intergenic
GCCGAGATCGGAGAATGTGG+CGG 0.674748 2.4:+27822467 None:intergenic
CGTCGATTCCAATCACGTGA+CGG 0.678007 2.4:+27822352 None:intergenic
TTGCAGTACGACCAACACGA+TGG 0.688798 2.4:+27819518 None:intergenic
GCATGTGGAGACAAAGACGA+TGG 0.715178 2.4:+27820880 None:intergenic
CTGTAGGTATATCCAGACCA+CGG 0.748122 2.4:+27819674 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTAATACTGATATT+TGG - chr2.4:27820913-27820932 MS.gene92155:CDS 10.0%
!!! TTTATTTTTATTTGATCATT+AGG - chr2.4:27818802-27818821 MS.gene92155:intron 10.0%
!! AAAATACATGTAACAAAAAA+TGG + chr2.4:27818616-27818635 None:intergenic 15.0%
!! AACGAATAATAAAACAAATT+TGG + chr2.4:27819829-27819848 None:intergenic 15.0%
!! AAGAGAAAATTATAGTTAAT+AGG - chr2.4:27821512-27821531 MS.gene92155:intron 15.0%
!! TTCCATTATCTATTTATATA+AGG + chr2.4:27820238-27820257 None:intergenic 15.0%
!! TTGAATTTAAATTAGTAAAG+AGG + chr2.4:27821469-27821488 None:intergenic 15.0%
!! TTTAATTACAAAGTTAGATA+TGG + chr2.4:27821783-27821802 None:intergenic 15.0%
!!! ATTTTTTGTTACATGTATTT+TGG - chr2.4:27818615-27818634 MS.gene92155:intron 15.0%
!!! TATTAACTATAATTTTCTCT+TGG + chr2.4:27821513-27821532 None:intergenic 15.0%
!!! TGATGAAAATTTCAAATTTT+TGG - chr2.4:27820305-27820324 MS.gene92155:intron 15.0%
!!! TTTGTTATTAAAATAACTCA+GGG + chr2.4:27817812-27817831 None:intergenic 15.0%
!!! TTTTGTTATTAAAATAACTC+AGG + chr2.4:27817813-27817832 None:intergenic 15.0%
!! AAAGTTATGAAGTTGTTTAT+TGG - chr2.4:27821646-27821665 MS.gene92155:intron 20.0%
!! AAGAAATAAAGAATTTCCAA+AGG - chr2.4:27822385-27822404 MS.gene92155:CDS 20.0%
!! AAGTTATGAAGTTGTTTATT+GGG - chr2.4:27821647-27821666 MS.gene92155:intron 20.0%
!! AATAACAAAAGATAACAAGT+TGG - chr2.4:27817823-27817842 MS.gene92155:intron 20.0%
!! AATAATTAAATGTCTGTTTG+TGG - chr2.4:27819035-27819054 MS.gene92155:intron 20.0%
!! AATACATTACAGATGAATTT+CGG - chr2.4:27821487-27821506 MS.gene92155:intron 20.0%
!! AGAAATAAAGAATTTCCAAA+GGG - chr2.4:27822386-27822405 MS.gene92155:CDS 20.0%
!! ATAACAAAAGATAACAAGTT+GGG - chr2.4:27817824-27817843 MS.gene92155:intron 20.0%
!! ATATAAAGAATGCATAAAGA+TGG + chr2.4:27820352-27820371 None:intergenic 20.0%
!! ATATATAAATGAGACAAAGA+AGG + chr2.4:27820682-27820701 None:intergenic 20.0%
!! ATGTAACATCAATAAAGAAA+AGG - chr2.4:27822447-27822466 MS.gene92155:CDS 20.0%
!! ATTATAGTTAATAGGCATAT+AGG - chr2.4:27821520-27821539 MS.gene92155:intron 20.0%
!! CACCTTATATAAATAGATAA+TGG - chr2.4:27820233-27820252 MS.gene92155:intron 20.0%
!! CATTATCTATTTATATAAGG+TGG + chr2.4:27820235-27820254 None:intergenic 20.0%
!! CTAACTTTGTAATTAAATTC+TGG - chr2.4:27821786-27821805 MS.gene92155:intron 20.0%
!! GAGAATAAATTGTTATATCT+AGG - chr2.4:27822480-27822499 MS.gene92155:CDS 20.0%
!! TACAAAAAAACAAAAATAGC+AGG + chr2.4:27818753-27818772 None:intergenic 20.0%
!! TATGTGTTAGTAATCAAAAT+TGG - chr2.4:27818114-27818133 MS.gene92155:intron 20.0%
!! TGATTTGATCATTATGAATT+TGG - chr2.4:27817426-27817445 MS.gene92155:CDS 20.0%
!! TTTCTAACATAATCATAACT+AGG + chr2.4:27821859-27821878 None:intergenic 20.0%
!!! AAAATTTCAAATTTTTGGCT+TGG - chr2.4:27820310-27820329 MS.gene92155:intron 20.0%
!!! AAGATATTAGTGTTTTATTG+AGG - chr2.4:27821585-27821604 MS.gene92155:intron 20.0%
!!! AAGTTCTCTAATTTTTTGAA+GGG - chr2.4:27821681-27821700 MS.gene92155:intron 20.0%
!!! AATTTTTTTGATTTGAAGTC+CGG - chr2.4:27819100-27819119 MS.gene92155:intron 20.0%
!!! ACAATCAAATTTTATCATGT+TGG + chr2.4:27818877-27818896 None:intergenic 20.0%
!!! AGATATTAGTGTTTTATTGA+GGG - chr2.4:27821586-27821605 MS.gene92155:intron 20.0%
!!! ATCTATCCTTGATTTTTTTT+GGG - chr2.4:27821751-27821770 MS.gene92155:intron 20.0%
!!! ATTCTATTTCTGTTGTAAAT+TGG + chr2.4:27821888-27821907 None:intergenic 20.0%
!!! GATATTTTGTCAAAAAAGAA+AGG - chr2.4:27821014-27821033 MS.gene92155:CDS 20.0%
!!! TATCTATCCTTGATTTTTTT+TGG - chr2.4:27821750-27821769 MS.gene92155:intron 20.0%
!!! TTAAGTTGTTTATCCAAATA+AGG + chr2.4:27817558-27817577 None:intergenic 20.0%
! AAAGGTGAGATATATTAAAG+TGG - chr2.4:27822613-27822632 MS.gene92155:CDS 25.0%
! AAGTAGAAAATGTTCGAAAA+GGG + chr2.4:27821065-27821084 None:intergenic 25.0%
! AAGTTATCATGAAGAGTTTA+TGG - chr2.4:27817915-27817934 MS.gene92155:intron 25.0%
! AATTGGATAATGTACTTGAA+TGG - chr2.4:27818131-27818150 MS.gene92155:intron 25.0%
! AATTTAGTGGTAATTAACTC+TGG + chr2.4:27821125-27821144 None:intergenic 25.0%
! ACAAAAGAAGGAAATTTGTA+AGG + chr2.4:27820104-27820123 None:intergenic 25.0%
! AGGATTTCTTTCCTAAAATA+TGG - chr2.4:27819194-27819213 MS.gene92155:intron 25.0%
! ATGGTTTACTCATTAATAGT+TGG - chr2.4:27819248-27819267 MS.gene92155:intron 25.0%
! ATTTCACAGTAATGTTTATG+AGG + chr2.4:27820394-27820413 None:intergenic 25.0%
! CAAAAGAAGGAAATTTGTAA+GGG + chr2.4:27820103-27820122 None:intergenic 25.0%
! CAAATATTTAGACAAAGAGA+AGG + chr2.4:27819559-27819578 None:intergenic 25.0%
! CAGACATTTAATTATTAGAC+TGG + chr2.4:27819031-27819050 None:intergenic 25.0%
! CATGTGTAAAAATAAGGATA+AGG + chr2.4:27820706-27820725 None:intergenic 25.0%
! CTAAATTGTATGACAAAGAA+AGG + chr2.4:27820588-27820607 None:intergenic 25.0%
! CTTCAAAAAATTAGAGAACT+TGG + chr2.4:27821682-27821701 None:intergenic 25.0%
! GATTGAATACAAAGAAAATG+AGG - chr2.4:27822046-27822065 MS.gene92155:CDS 25.0%
! GGACTTCAAATCAAAAAAAT+TGG + chr2.4:27819101-27819120 None:intergenic 25.0%
! GGATTTCTTTCCTAAAATAT+GGG - chr2.4:27819195-27819214 MS.gene92155:intron 25.0%
! GTTATGATTATGTTAGAAAC+TGG - chr2.4:27821860-27821879 MS.gene92155:intron 25.0%
! TAAACAGGAAAAAGTGAAAT+TGG - chr2.4:27822412-27822431 MS.gene92155:CDS 25.0%
! TAGATAGTTAAACAATTTGC+TGG + chr2.4:27820546-27820565 None:intergenic 25.0%
! TATAACTAACAGATTATCCT+AGG - chr2.4:27819522-27819541 MS.gene92155:CDS 25.0%
! TCATCGTTTAAATTTAATGC+TGG - chr2.4:27819614-27819633 MS.gene92155:intron 25.0%
! TGTACATAGGCAATAAAATA+AGG + chr2.4:27820625-27820644 None:intergenic 25.0%
! TTATAGAATGCACACAATTT+AGG - chr2.4:27821918-27821937 MS.gene92155:intron 25.0%
! TTATCAATTATGATGTTCCA+AGG - chr2.4:27819790-27819809 MS.gene92155:CDS 25.0%
! TTATTGCCTATGTACAAAAT+GGG - chr2.4:27820629-27820648 MS.gene92155:intron 25.0%
! TTCATCAATTAACAACCTTA+AGG + chr2.4:27820511-27820530 None:intergenic 25.0%
! TTTATATTCATTCAGATCAC+AGG - chr2.4:27819662-27819681 MS.gene92155:CDS 25.0%
! TTTATTGCCTATGTACAAAA+TGG - chr2.4:27820628-27820647 MS.gene92155:intron 25.0%
! TTTCACAGTAATGTTTATGA+GGG + chr2.4:27820393-27820412 None:intergenic 25.0%
! TTTGCTTTCAGAAAATGTAA+CGG + chr2.4:27820072-27820091 None:intergenic 25.0%
!! AAGCAAAGTTTAGAATTTAG+TGG + chr2.4:27821138-27821157 None:intergenic 25.0%
!! ATACATCCTTCACATTTTTA+GGG + chr2.4:27818484-27818503 None:intergenic 25.0%
!! ATTTGAAGCATTTGATGAAA+CGG - chr2.4:27819852-27819871 MS.gene92155:intron 25.0%
!! GAACATCATAATTGATAACA+AGG + chr2.4:27819788-27819807 None:intergenic 25.0%
!! TATACATCCTTCACATTTTT+AGG + chr2.4:27818485-27818504 None:intergenic 25.0%
!! TGGCTTTTATTGAATAATTC+TGG + chr2.4:27821820-27821839 None:intergenic 25.0%
!! TTATTCTAGTTGGATTCAAA+TGG - chr2.4:27820465-27820484 MS.gene92155:intron 25.0%
!! TTGTCTAAAATGGAAGATAT+GGG - chr2.4:27818518-27818537 MS.gene92155:intron 25.0%
!! TTTGAAGTGTAGTTATGTAA+TGG - chr2.4:27820967-27820986 MS.gene92155:CDS 25.0%
!! TTTTATTGAGGGAAAGTTTT+AGG - chr2.4:27821597-27821616 MS.gene92155:intron 25.0%
!!! AAAATAGCTTTTAGCTTATG+TGG + chr2.4:27817892-27817911 None:intergenic 25.0%
!!! AAATAGCTTTTAGCTTATGT+GGG + chr2.4:27817891-27817910 None:intergenic 25.0%
!!! AATGTTCTAAAAAGTGAAAG+TGG + chr2.4:27818714-27818733 None:intergenic 25.0%
!!! AGTTCACAACTCTTTTTTTT+TGG - chr2.4:27818661-27818680 MS.gene92155:intron 25.0%
!!! ATTATTTTTTTGGTGGTGAA+AGG - chr2.4:27822595-27822614 MS.gene92155:CDS 25.0%
!!! CAAGTTCTCTAATTTTTTGA+AGG - chr2.4:27821680-27821699 MS.gene92155:intron 25.0%
!!! CTGTTTTTACTGTTTATTCT+TGG - chr2.4:27819416-27819435 MS.gene92155:intron 25.0%
!!! GAGATGTATTATTTTTTTGG+TGG - chr2.4:27822588-27822607 MS.gene92155:CDS 25.0%
!!! GGTGAGATGTATTATTTTTT+TGG - chr2.4:27822585-27822604 MS.gene92155:CDS 25.0%
!!! GTTCACAACTCTTTTTTTTT+GGG - chr2.4:27818662-27818681 MS.gene92155:intron 25.0%
!!! GTTCAGACATTTACTTTTTT+GGG - chr2.4:27820739-27820758 MS.gene92155:intron 25.0%
!!! TGAAAAAGGTATGTTTTTAC+AGG - chr2.4:27822081-27822100 MS.gene92155:CDS 25.0%
!!! TGTTCAGACATTTACTTTTT+TGG - chr2.4:27820738-27820757 MS.gene92155:intron 25.0%
!!! TTACATTTTCTGAAAGCAAA+TGG - chr2.4:27820072-27820091 MS.gene92155:intron 25.0%
!!! TTCACAACTCTTTTTTTTTG+GGG - chr2.4:27818663-27818682 MS.gene92155:intron 25.0%
!!! TTTACTTTTTTGGGTTAAAG+TGG - chr2.4:27820748-27820767 MS.gene92155:intron 25.0%
!!! TTTTGAGGTTTATTGGAAAT+GGG + chr2.4:27816898-27816917 None:intergenic 25.0%
AAAAAACAAAAATAGCAGGC+AGG + chr2.4:27818749-27818768 None:intergenic 30.0%
AAAAACAAAAATAGCAGGCA+GGG + chr2.4:27818748-27818767 None:intergenic 30.0%
AAAATCAAGGATATCAGACA+AGG - chr2.4:27822564-27822583 MS.gene92155:CDS 30.0%
AAACTGTGTTTATTGTCCTT+CGG + chr2.4:27818979-27818998 None:intergenic 30.0%
AAATAGAGACCCTTATTGAA+AGG - chr2.4:27822012-27822031 MS.gene92155:intron 30.0%
AAATGGAAGATATGGGTATT+AGG - chr2.4:27818525-27818544 MS.gene92155:intron 30.0%
AGAAAGTAAAGAAGTCGTTA+GGG + chr2.4:27822219-27822238 None:intergenic 30.0%
AGAATGATGTTGATCTCATT+CGG - chr2.4:27821988-27822007 MS.gene92155:intron 30.0%
AGCAATGTTCAACATACAAA+TGG + chr2.4:27820205-27820224 None:intergenic 30.0%
AGCACTTCATGACTTTAAAT+CGG - chr2.4:27819698-27819717 MS.gene92155:CDS 30.0%
AGGATCTCAATTATTCTAGT+TGG - chr2.4:27820455-27820474 MS.gene92155:intron 30.0%
AGGTTGTTAATTGATGAAAG+CGG - chr2.4:27820513-27820532 MS.gene92155:intron 30.0%
AGTACAAATCTATCCATGAT+TGG - chr2.4:27818067-27818086 MS.gene92155:intron 30.0%
AGTAGAAAATGTTCGAAAAG+GGG + chr2.4:27821064-27821083 None:intergenic 30.0%
ATTCATCCCTAAAAATGTGA+AGG - chr2.4:27818475-27818494 MS.gene92155:intron 30.0%
ATTTCCAAAGGGAAATAAAC+AGG - chr2.4:27822397-27822416 MS.gene92155:CDS 30.0%
CAAGTAGAAAATGTTCGAAA+AGG + chr2.4:27821066-27821085 None:intergenic 30.0%
CAAGTGCATGTGTAAAAATA+AGG + chr2.4:27820712-27820731 None:intergenic 30.0%
CTATCTGTAGCATATTATAG+CGG - chr2.4:27819366-27819385 MS.gene92155:intron 30.0%
CTGATCATAAAACTTTCACA+TGG - chr2.4:27820019-27820038 MS.gene92155:intron 30.0%
GAATTGGTAGAGTTAATCTT+TGG - chr2.4:27819391-27819410 MS.gene92155:intron 30.0%
GAGATTCTATATTCCAATCA+TGG + chr2.4:27818083-27818102 None:intergenic 30.0%
GTATGATTTATGACACATTG+TGG + chr2.4:27821439-27821458 None:intergenic 30.0%
TAGGAAACTGAATTGAATAC+TGG + chr2.4:27821840-27821859 None:intergenic 30.0%
TATGAAGTTGTTTATTGGGA+GGG - chr2.4:27821651-27821670 MS.gene92155:intron 30.0%
TATGCAATTCAATGCTTAGA+CGG + chr2.4:27822117-27822136 None:intergenic 30.0%
TATTGCCTATGTACAAAATG+GGG - chr2.4:27820630-27820649 MS.gene92155:intron 30.0%
TCTTCATTCATTGAATGCAT+TGG - chr2.4:27820135-27820154 MS.gene92155:intron 30.0%
TGAATTCAATATTGAGACCA+TGG - chr2.4:27821218-27821237 MS.gene92155:intron 30.0%
TGGTTTATTGGGAAGATATT+AGG - chr2.4:27821623-27821642 MS.gene92155:intron 30.0%
TGTTGCAAAAATGAAGATGA+TGG - chr2.4:27822268-27822287 MS.gene92155:CDS 30.0%
TTAATTATTAGACTGGACTC+TGG + chr2.4:27819024-27819043 None:intergenic 30.0%
TTATGAAGTTGTTTATTGGG+AGG - chr2.4:27821650-27821669 MS.gene92155:intron 30.0%
TTGCAGAATTGAACACAATT+TGG + chr2.4:27821399-27821418 None:intergenic 30.0%
TTGCTTTCAGAAAATGTAAC+GGG + chr2.4:27820071-27820090 None:intergenic 30.0%
TTGGAAAAGAAAAGTAACCT+TGG + chr2.4:27819810-27819829 None:intergenic 30.0%
TTGTTTAACTATCTACCCTT+TGG - chr2.4:27820551-27820570 MS.gene92155:intron 30.0%
TTTCCTCCCAAAAAAAATCA+AGG + chr2.4:27821760-27821779 None:intergenic 30.0%
! ACCATGACATCTAATTTTCA+TGG + chr2.4:27820268-27820287 None:intergenic 30.0%
! CTTGTCTAAAATGGAAGATA+TGG - chr2.4:27818517-27818536 MS.gene92155:intron 30.0%
! GTTTGAAGAGTGGAAAATTT+TGG + chr2.4:27816843-27816862 None:intergenic 30.0%
! GTTTTCGTAAGTGTTTATGA+TGG - chr2.4:27817754-27817773 MS.gene92155:intron 30.0%
! TAAACACAGTTTCAAGCTTT+TGG - chr2.4:27818987-27819006 MS.gene92155:intron 30.0%
! TGTCTGATATCCTTGATTTT+TGG + chr2.4:27822564-27822583 None:intergenic 30.0%
! TTGTTGTTGCAGAAAAAAGT+AGG + chr2.4:27818352-27818371 None:intergenic 30.0%
! TTTTCCTGTTTATTTCCCTT+TGG + chr2.4:27822404-27822423 None:intergenic 30.0%
!! AAAATGAAGATGATGGATGA+TGG - chr2.4:27822275-27822294 MS.gene92155:CDS 30.0%
!! AAATGAAGATGATGGATGAT+GGG - chr2.4:27822276-27822295 MS.gene92155:CDS 30.0%
!! AATGGTGGAATCTTTTATGA+CGG - chr2.4:27819498-27819517 MS.gene92155:CDS 30.0%
!! AGTTATGTAATGGTGTTGTA+GGG - chr2.4:27820977-27820996 MS.gene92155:CDS 30.0%
!! ATACCTTTTTCATGAGAGAA+AGG + chr2.4:27822073-27822092 None:intergenic 30.0%
!! ATTGAATAATTCTGGTTCAG+TGG + chr2.4:27821812-27821831 None:intergenic 30.0%
!! TAGTTATGTAATGGTGTTGT+AGG - chr2.4:27820976-27820995 MS.gene92155:CDS 30.0%
!! TGTAAACCTCTTTAAAGCTA+AGG + chr2.4:27821268-27821287 None:intergenic 30.0%
!! TTCAAGTTGCCTTTCAATAA+GGG + chr2.4:27822024-27822043 None:intergenic 30.0%
!! TTTCAAGTTGCCTTTCAATA+AGG + chr2.4:27822025-27822044 None:intergenic 30.0%
!!! AGTTTTAGGAAGTGGTTTAT+TGG - chr2.4:27821611-27821630 MS.gene92155:intron 30.0%
!!! GTTTTAGGAAGTGGTTTATT+GGG - chr2.4:27821612-27821631 MS.gene92155:intron 30.0%
!!! GTTTTGAGGTTTATTGGAAA+TGG + chr2.4:27816899-27816918 None:intergenic 30.0%
!!! TATCCTTGATTTTTTTTGGG+AGG - chr2.4:27821754-27821773 MS.gene92155:intron 30.0%
AAAAAGTGAAAGTGGCAACA+TGG + chr2.4:27818706-27818725 None:intergenic 35.0%
AAAGAATGCATAAAGATGGC+AGG + chr2.4:27820348-27820367 None:intergenic 35.0%
AAGAATGCATAAAGATGGCA+GGG + chr2.4:27820347-27820366 None:intergenic 35.0%
AATGAGCTGAAAAGAGCTTA+TGG - chr2.4:27817939-27817958 MS.gene92155:intron 35.0%
ACACGATGGATATAATCTCT+TGG + chr2.4:27819903-27819922 None:intergenic 35.0%
ACAGATAGAAAAAGCAACAG+AGG + chr2.4:27819354-27819373 None:intergenic 35.0%
ACATCAGTTGCTAGTAATAC+AGG + chr2.4:27819732-27819751 None:intergenic 35.0%
ACTCGACTTCAAACAAAAGA+AGG + chr2.4:27820116-27820135 None:intergenic 35.0%
AGAGATTATATCCATCGTGT+TGG - chr2.4:27819903-27819922 MS.gene92155:intron 35.0%
AGCATTAACACTTACATGTC+AGG - chr2.4:27817532-27817551 MS.gene92155:intron 35.0%
AGCATTCTTTATGATTCCGA+AGG - chr2.4:27818960-27818979 MS.gene92155:intron 35.0%
AGCTTATGAAGGGTTTAAGA+CGG - chr2.4:27818427-27818446 MS.gene92155:intron 35.0%
CAACCTTAAGGATATGAGTT+CGG + chr2.4:27820499-27820518 None:intergenic 35.0%
CAGAAAGTAAAGAAGTCGTT+AGG + chr2.4:27822220-27822239 None:intergenic 35.0%
CCAACACATACATCATGTTT+AGG - chr2.4:27820435-27820454 MS.gene92155:intron 35.0%
CCTAAACATGATGTATGTGT+TGG + chr2.4:27820438-27820457 None:intergenic 35.0%
CTCAAATAAGCTAATCCAAG+CGG - chr2.4:27818029-27818048 MS.gene92155:intron 35.0%
CTTAAACTGTACATGTGTCT+TGG - chr2.4:27821296-27821315 MS.gene92155:intron 35.0%
CTTGTAATTCTCATGTTGAC+TGG - chr2.4:27820165-27820184 MS.gene92155:intron 35.0%
GAATGATGTTGATCTCATTC+GGG - chr2.4:27821989-27822008 MS.gene92155:intron 35.0%
GATCAACATCATTCTGCAAA+TGG + chr2.4:27821983-27822002 None:intergenic 35.0%
GATGACAATCTCTGCAATTT+GGG + chr2.4:27819599-27819618 None:intergenic 35.0%
GATTGTTGCTCCAAAAATCA+AGG - chr2.4:27822551-27822570 MS.gene92155:CDS 35.0%
GCACTTCATGACTTTAAATC+GGG - chr2.4:27819699-27819718 MS.gene92155:CDS 35.0%
GCCATGAAAATTAGATGTCA+TGG - chr2.4:27820264-27820283 MS.gene92155:intron 35.0%
GGAAATCAATGCACAACAAA+AGG + chr2.4:27821950-27821969 None:intergenic 35.0%
GGTTGAAAATCTTAAGCAAC+AGG - chr2.4:27818448-27818467 MS.gene92155:intron 35.0%
GGTTGTTAATTGATGAAAGC+GGG - chr2.4:27820514-27820533 MS.gene92155:intron 35.0%
GTAAAAACCTGCAAAGAACT+CGG - chr2.4:27817003-27817022 MS.gene92155:intron 35.0%
GTTGCACATCTTGTCTAAAA+TGG - chr2.4:27818508-27818527 MS.gene92155:intron 35.0%
TACTACCAAGATTACAATGC+CGG + chr2.4:27819122-27819141 None:intergenic 35.0%
TATTGGAAATGGGAAGTGAA+GGG + chr2.4:27816888-27816907 None:intergenic 35.0%
TCAAATAATCCAGTCGAAAC+AGG - chr2.4:27817786-27817805 MS.gene92155:intron 35.0%
TCAGATACATGTCTGGATTT+GGG - chr2.4:27821547-27821566 MS.gene92155:intron 35.0%
TCATGACTTTAAATCGGGAA+AGG - chr2.4:27819704-27819723 MS.gene92155:CDS 35.0%
TCCAAAAAATTCGAGAGTCT+TGG + chr2.4:27821712-27821731 None:intergenic 35.0%
TGCTTTCAGAAAATGTAACG+GGG + chr2.4:27820070-27820089 None:intergenic 35.0%
TTAGAAGATAGCACGTAACT+AGG + chr2.4:27820819-27820838 None:intergenic 35.0%
TTATTGGAAATGGGAAGTGA+AGG + chr2.4:27816889-27816908 None:intergenic 35.0%
TTCAGATACATGTCTGGATT+TGG - chr2.4:27821546-27821565 MS.gene92155:intron 35.0%
TTGGTATTACAATGACACTG+AGG + chr2.4:27818858-27818877 None:intergenic 35.0%
TTTACTTTCTGATGCATTGC+AGG - chr2.4:27822229-27822248 MS.gene92155:CDS 35.0%
TTTATATCAAAGCCCAGCTT+TGG - chr2.4:27820365-27820384 MS.gene92155:intron 35.0%
TTTCCGAACTCATATCCTTA+AGG - chr2.4:27820493-27820512 MS.gene92155:intron 35.0%
! AAAAACCTAGAGGGTATGTT+TGG - chr2.4:27821163-27821182 MS.gene92155:CDS 35.0%
! AACAAAGTTTGCTCTTACCT+GGG + chr2.4:27819976-27819995 None:intergenic 35.0%
! CAGAAAAAAGTAGGTTTTGC+CGG + chr2.4:27818343-27818362 None:intergenic 35.0%
! GAGGATTAAGGTTTTGCTTA+AGG - chr2.4:27817350-27817369 MS.gene92155:intron 35.0%
! GCATTTGATGAAACGGATTT+CGG - chr2.4:27819859-27819878 MS.gene92155:intron 35.0%
! GCTTGTTGAAAAAACCTAGA+GGG - chr2.4:27821154-27821173 MS.gene92155:CDS 35.0%
! TGCTTGTTGAAAAAACCTAG+AGG - chr2.4:27821153-27821172 MS.gene92155:CDS 35.0%
! TTGATAACAAGGTCAACTGT+AGG + chr2.4:27819777-27819796 None:intergenic 35.0%
!! ACCTCTTTAAAGCTAAGGAA+AGG + chr2.4:27821263-27821282 None:intergenic 35.0%
!! ATCTTGTTATTGCTACTCCT+GGG - chr2.4:27817328-27817347 MS.gene92155:intron 35.0%
!! GTGGAAAATTTTGGTCTACA+AGG + chr2.4:27816834-27816853 None:intergenic 35.0%
!! GTTTGTTGTGGACAGTTTAT+TGG - chr2.4:27818919-27818938 MS.gene92155:intron 35.0%
!! TCCTTTCCTTAGCTTTAAAG+AGG - chr2.4:27821259-27821278 MS.gene92155:intron 35.0%
!!! AAGACTCTCGAATTTTTTGG+AGG - chr2.4:27821711-27821730 MS.gene92155:intron 35.0%
!!! ACCAAGACTCTCGAATTTTT+TGG - chr2.4:27821708-27821727 MS.gene92155:intron 35.0%
!!! ACTTTTTTGGGTTAAAGTGG+TGG - chr2.4:27820751-27820770 MS.gene92155:intron 35.0%
!!! GCTGTTTTCTAAAGCTATCT+TGG - chr2.4:27817682-27817701 MS.gene92155:intron 35.0%
!!! TGTTGATTTTGAGACGTGTT+TGG - chr2.4:27817484-27817503 MS.gene92155:intron 35.0%
AAACCCTTCATAAGCTTCGA+AGG + chr2.4:27818423-27818442 None:intergenic 40.0%
AAACTGTACATGTGTCTTGG+TGG - chr2.4:27821299-27821318 MS.gene92155:intron 40.0%
AAACTGTCCACAACAAACGA+GGG + chr2.4:27818917-27818936 None:intergenic 40.0%
AACTCGGAATGAAAACTCCA+CGG - chr2.4:27817019-27817038 MS.gene92155:intron 40.0%
AAGATAGCACGTAACTAGGA+AGG + chr2.4:27820815-27820834 None:intergenic 40.0%
AATGGGAAGTGAAGGGTTTA+TGG + chr2.4:27816881-27816900 None:intergenic 40.0%
AGAAGGACATGTAATTGCCT+AGG + chr2.4:27819542-27819561 None:intergenic 40.0%
AGATAGCACGTAACTAGGAA+GGG + chr2.4:27820814-27820833 None:intergenic 40.0%
AGGTTGTTCAGATACATGTC+TGG - chr2.4:27821540-27821559 MS.gene92155:intron 40.0%
ATCCATACCACCAACAACAA+CGG + chr2.4:27817271-27817290 None:intergenic 40.0%
ATGCCTTCGAAGCTTATGAA+GGG - chr2.4:27818417-27818436 MS.gene92155:intron 40.0%
ATTTGACATCACCAAAGCCA+TGG + chr2.4:27821238-27821257 None:intergenic 40.0%
CAACATCATTCTGCAAATGG+TGG + chr2.4:27821980-27821999 None:intergenic 40.0%
CAATATTGAGACCATGGCTT+TGG - chr2.4:27821224-27821243 MS.gene92155:intron 40.0%
CACATTATCTGCTGAAAGAC+GGG + chr2.4:27819224-27819243 None:intergenic 40.0%
CCACATTATCTGCTGAAAGA+CGG + chr2.4:27819225-27819244 None:intergenic 40.0%
CGATGACAATCTCTGCAATT+TGG + chr2.4:27819600-27819619 None:intergenic 40.0%
CTGAAAACGCTAGAAGAGAA+AGG - chr2.4:27822335-27822354 MS.gene92155:CDS 40.0%
GATTTCGGCTATTCACATGT+AGG - chr2.4:27819874-27819893 MS.gene92155:intron 40.0%
GCAAGTTACAGCATACTCAA+GGG + chr2.4:27821328-27821347 None:intergenic 40.0%
GCTTAGACAGACTAAAGAGT+TGG - chr2.4:27817293-27817312 MS.gene92155:intron 40.0%
GCTTTCAGAAAATGTAACGG+GGG + chr2.4:27820069-27820088 None:intergenic 40.0%
GGAGTAGCAATAACAAGATG+CGG + chr2.4:27817327-27817346 None:intergenic 40.0%
GGATAATCCTGAAATTGCTC+CGG - chr2.4:27817371-27817390 MS.gene92155:CDS 40.0%
GGTCCTTTCTCTCATGAAAA+AGG - chr2.4:27822067-27822086 MS.gene92155:CDS 40.0%
TAAACTGTCCACAACAAACG+AGG + chr2.4:27818918-27818937 None:intergenic 40.0%
TAACTATCTACCCTTTGGCT+TGG - chr2.4:27820556-27820575 MS.gene92155:intron 40.0%
TACAATGACACTGAGGAAGA+GGG + chr2.4:27818851-27818870 None:intergenic 40.0%
TATGCCTTCGAAGCTTATGA+AGG - chr2.4:27818416-27818435 MS.gene92155:intron 40.0%
TCTAGAAAGATACCTGCATG+TGG + chr2.4:27818570-27818589 None:intergenic 40.0%
TCTGTAGCATATTATAGCGG+AGG - chr2.4:27819369-27819388 MS.gene92155:intron 40.0%
TGCAAGTTACAGCATACTCA+AGG + chr2.4:27821329-27821348 None:intergenic 40.0%
TGCATCCCTCAAATTCTATC+TGG - chr2.4:27817057-27817076 MS.gene92155:intron 40.0%
TGGATAGATTTGTACTCACC+CGG + chr2.4:27818063-27818082 None:intergenic 40.0%
TTACAATGACACTGAGGAAG+AGG + chr2.4:27818852-27818871 None:intergenic 40.0%
TTACGAGATGGTTTGAAGAG+TGG + chr2.4:27816853-27816872 None:intergenic 40.0%
TTACTAGCAACTGATGTTGC+TGG - chr2.4:27819735-27819754 MS.gene92155:CDS 40.0%
TTCAGTGCTTACCAGAAAAC+CGG - chr2.4:27818321-27818340 MS.gene92155:intron 40.0%
TTGAAGAGAAAGCGAAAGAG+CGG - chr2.4:27822300-27822319 MS.gene92155:CDS 40.0%
TTTATGGAGGGTTTACGAGA+TGG + chr2.4:27816865-27816884 None:intergenic 40.0%
TTTCATTCCGAGTTCTTTGC+AGG + chr2.4:27817013-27817032 None:intergenic 40.0%
! ACATGCCCCATTTTGTACAT+AGG + chr2.4:27820638-27820657 None:intergenic 40.0%
! AGACGGGTATCCCATATTTT+AGG + chr2.4:27819208-27819227 None:intergenic 40.0%
! AGACTAAAGAGTTGGTTGCT+AGG - chr2.4:27817301-27817320 MS.gene92155:intron 40.0%
! CAACAAAGTTTGCTCTTACC+TGG + chr2.4:27819977-27819996 None:intergenic 40.0%
! CTTTCAGAAAATGTAACGGG+GGG + chr2.4:27820068-27820087 None:intergenic 40.0%
! GCATATTATAGCGGAGGAAT+TGG - chr2.4:27819375-27819394 MS.gene92155:intron 40.0%
! GCTTTTGCAGTTTCTTGTCT+TGG - chr2.4:27818244-27818263 MS.gene92155:intron 40.0%
! GGCATTGTAATCTTGGTAGT+AGG - chr2.4:27819121-27819140 MS.gene92155:intron 40.0%
! TAATCTTGGTAGTAGGCACT+TGG - chr2.4:27819128-27819147 MS.gene92155:intron 40.0%
! TCAGCAGATAATGTGGACTA+TGG - chr2.4:27819229-27819248 MS.gene92155:intron 40.0%
! TGCTTTGGATAACTTCCAGA+AGG + chr2.4:27820779-27820798 None:intergenic 40.0%
!! CATCTTGTTATTGCTACTCC+TGG - chr2.4:27817327-27817346 MS.gene92155:intron 40.0%
!! CTTACATGTCAGGCCTTATT+TGG - chr2.4:27817542-27817561 MS.gene92155:intron 40.0%
!! GTTTTCGGGGTTGGAATTAA+GGG + chr2.4:27816941-27816960 None:intergenic 40.0%
!! TGTTTTCGGGGTTGGAATTA+AGG + chr2.4:27816942-27816961 None:intergenic 40.0%
!!! GACGTCGTTTTGAGGTTTAT+TGG + chr2.4:27816905-27816924 None:intergenic 40.0%
!!! TGAGGGAAAGTTTTAGGAAG+TGG - chr2.4:27821603-27821622 MS.gene92155:intron 40.0%
!!! TTTTGGTCTACAAGGTGTTG+TGG + chr2.4:27816826-27816845 None:intergenic 40.0%
AACTGTCCACAACAAACGAG+GGG + chr2.4:27818916-27818935 None:intergenic 45.0%
ACCTTAGTCCTAGCGAAAAC+CGG + chr2.4:27817393-27817412 None:intergenic 45.0%
AGCAAAACCTTAATCCTCCC+AGG + chr2.4:27817348-27817367 None:intergenic 45.0%
AGTAGACATAGGGTGCAAGT+AGG - chr2.4:27819174-27819193 MS.gene92155:intron 45.0%
CATCCTGAAAACCAACATCC+AGG + chr2.4:27818286-27818305 None:intergenic 45.0%
CCGTCTTTCAGCAGATAATG+TGG - chr2.4:27819222-27819241 MS.gene92155:intron 45.0%
CCTATGTCTACTAGCAAGCA+GGG + chr2.4:27819166-27819185 None:intergenic 45.0%
CTGTAGGTATATCCAGACCA+CGG + chr2.4:27819761-27819780 None:intergenic 45.0%
GAAGTCCGGCATTGTAATCT+TGG - chr2.4:27819114-27819133 MS.gene92155:intron 45.0%
GACGGCCAGATAGAATTTGA+GGG + chr2.4:27817065-27817084 None:intergenic 45.0%
GAGACAAAGAAGGCAATCAC+TGG + chr2.4:27820672-27820691 None:intergenic 45.0%
GAGTCATGCTTGCTTACACT+TGG - chr2.4:27819458-27819477 MS.gene92155:intron 45.0%
GGAAGTGAAGGGTTTATGGA+GGG + chr2.4:27816877-27816896 None:intergenic 45.0%
GGATAGATTTGTACTCACCC+GGG + chr2.4:27818062-27818081 None:intergenic 45.0%
GTGTTGAAGTGGAGGTCTAA+TGG - chr2.4:27819480-27819499 MS.gene92155:CDS 45.0%
TCTGCAAATGGTGGCAAAAG+AGG + chr2.4:27821971-27821990 None:intergenic 45.0%
TGACGGCCAGATAGAATTTG+AGG + chr2.4:27817066-27817085 None:intergenic 45.0%
TTGAAGTGGAGGTCTAATGG+TGG - chr2.4:27819483-27819502 MS.gene92155:CDS 45.0%
TTGCTCTTACCTGGGTAACA+AGG + chr2.4:27819968-27819987 None:intergenic 45.0%
TTTATGAGGGAGCCAAAGCT+GGG + chr2.4:27820380-27820399 None:intergenic 45.0%
! AAATTGCTCCGGTTTTCGCT+AGG - chr2.4:27817382-27817401 MS.gene92155:CDS 45.0%
! ATGTTGACTGGTTGCTACGT+CGG - chr2.4:27820177-27820196 MS.gene92155:intron 45.0%
! CCTGCTTGCTAGTAGACATA+GGG - chr2.4:27819164-27819183 MS.gene92155:intron 45.0%
! TATTAGACTGGACTCTGGAG+AGG + chr2.4:27819019-27819038 None:intergenic 45.0%
! TTGTTATTGCTACTCCTGGG+AGG - chr2.4:27817331-27817350 MS.gene92155:intron 45.0%
!! CATTTTCCCCTCGTTTGTTG+TGG - chr2.4:27818907-27818926 MS.gene92155:intron 45.0%
!! GCTTACACTTGGTGTTGAAG+TGG - chr2.4:27819469-27819488 MS.gene92155:intron 45.0%
!! GTTAAAGTGGTGGATCCTTC+TGG - chr2.4:27820761-27820780 MS.gene92155:intron 45.0%
!! TACACTTGGTGTTGAAGTGG+AGG - chr2.4:27819472-27819491 MS.gene92155:intron 45.0%
!! TGTGTAACGACGTCGTTTTG+AGG + chr2.4:27816913-27816932 None:intergenic 45.0%
!!! AGTAGGTTTTGCCGGTTTTC+TGG + chr2.4:27818335-27818354 None:intergenic 45.0%
!!! AGTCCTGGATGTTGGTTTTC+AGG - chr2.4:27818280-27818299 MS.gene92155:intron 45.0%
AAAGGACCATGCCAAGCCAA+AGG + chr2.4:27820570-27820589 None:intergenic 50.0%
AAGGACCATGCCAAGCCAAA+GGG + chr2.4:27820569-27820588 None:intergenic 50.0%
AGAATCCACCAGCAGCATAG+GGG + chr2.4:27821191-27821210 None:intergenic 50.0%
CATTCAGATCACAGGCTCAG+AGG - chr2.4:27819670-27819689 MS.gene92155:CDS 50.0%
CCCTATGTCTACTAGCAAGC+AGG + chr2.4:27819167-27819186 None:intergenic 50.0%
CGAGACTGGAAGCGGTAAAA+CGG - chr2.4:27817101-27817120 MS.gene92155:intron 50.0%
CGTAACTAGGAAGGGATGAG+TGG + chr2.4:27820806-27820825 None:intergenic 50.0%
CTTCGGATTGCCGTTGTTGT+TGG - chr2.4:27817258-27817277 MS.gene92155:intron 50.0%
GAGAATCCACCAGCAGCATA+GGG + chr2.4:27821192-27821211 None:intergenic 50.0%
GATTTGTACTCACCCGGGTA+AGG + chr2.4:27818057-27818076 None:intergenic 50.0%
GCATGTGGAGACAAAGACGA+TGG + chr2.4:27818555-27818574 None:intergenic 50.0%
GCGAAAACCGGAGCAATTTC+AGG + chr2.4:27817381-27817400 None:intergenic 50.0%
GGGAAGTGAAGGGTTTATGG+AGG + chr2.4:27816878-27816897 None:intergenic 50.0%
GGGATCCAAACATACCCTCT+AGG + chr2.4:27821171-27821190 None:intergenic 50.0%
GGGATGAGTGGTGAATGCTT+TGG + chr2.4:27820794-27820813 None:intergenic 50.0%
GTACTGCAAGAGCAGGTAGA+GGG - chr2.4:27819928-27819947 MS.gene92155:intron 50.0%
GTGATTGGAATCGACGAGAC+TGG - chr2.4:27817087-27817106 MS.gene92155:intron 50.0%
GTTTATGAGGGAGCCAAAGC+TGG + chr2.4:27820381-27820400 None:intergenic 50.0%
TACTGCAAGAGCAGGTAGAG+GGG - chr2.4:27819929-27819948 MS.gene92155:intron 50.0%
TCAGTTGGCGGAGCAGTTTA+GGG - chr2.4:27817215-27817234 MS.gene92155:intron 50.0%
TCGTCTTTGTCTCCACATGC+AGG - chr2.4:27818555-27818574 MS.gene92155:intron 50.0%
TGAGAATCCACCAGCAGCAT+AGG + chr2.4:27821193-27821212 None:intergenic 50.0%
TGCTACTCCTGGGAGGATTA+AGG - chr2.4:27817338-27817357 MS.gene92155:intron 50.0%
TTCAGTTGGCGGAGCAGTTT+AGG - chr2.4:27817214-27817233 MS.gene92155:intron 50.0%
TTGCAGTACGACCAACACGA+TGG + chr2.4:27819917-27819936 None:intergenic 50.0%
! AATGTGGCGGTGGTGTTTTC+GGG + chr2.4:27816955-27816974 None:intergenic 50.0%
! CCCTGCTTGCTAGTAGACAT+AGG - chr2.4:27819163-27819182 MS.gene92155:intron 50.0%
! GAATGTGGCGGTGGTGTTTT+CGG + chr2.4:27816956-27816975 None:intergenic 50.0%
! GCAGGTTTTTACCGCCCATT+CGG + chr2.4:27816995-27817014 None:intergenic 50.0%
! TCAGAAAATGTAACGGGGGG+CGG + chr2.4:27820065-27820084 None:intergenic 50.0%
! TCCGGTTTTCGCTAGGACTA+AGG - chr2.4:27817389-27817408 MS.gene92155:CDS 50.0%
! TTTTTACCGCCCATTCGGAG+AGG + chr2.4:27816990-27817009 None:intergenic 50.0%
!! ATCTACCCTTTGGCTTGGCA+TGG - chr2.4:27820561-27820580 MS.gene92155:intron 50.0%
!! CGGCTTGCTGAACATACGTT+TGG - chr2.4:27817150-27817169 MS.gene92155:intron 50.0%
!! CGTCGATTCCAATCACGTGA+CGG + chr2.4:27817083-27817102 None:intergenic 50.0%
!! GTTTGGTGTGTTTGCGCTTG+TGG - chr2.4:27817167-27817186 MS.gene92155:intron 50.0%
!! TGCCGTTGTTGTTGGTGGTA+TGG - chr2.4:27817266-27817285 MS.gene92155:intron 50.0%
AACTCAGGGCCTGTTTCGAC+TGG + chr2.4:27817798-27817817 None:intergenic 55.0%
AATCCAAGCGGCTCCTTACC+CGG - chr2.4:27818041-27818060 MS.gene92155:intron 55.0%
ACCGCCACATTCTCCGATCT+CGG - chr2.4:27816964-27816983 MS.gene92155:intron 55.0%
ACTGCAAGAGCAGGTAGAGG+GGG - chr2.4:27819930-27819949 MS.gene92155:intron 55.0%
CGAGCTTGCGTTTCAGTTGG+CGG - chr2.4:27817203-27817222 MS.gene92155:intron 55.0%
CGTACTGCAAGAGCAGGTAG+AGG - chr2.4:27819927-27819946 MS.gene92155:intron 55.0%
CTATCTGGCCGTCACGTGAT+TGG - chr2.4:27817072-27817091 MS.gene92155:intron 55.0%
GCAGATCGAGTCCTGGATGT+TGG - chr2.4:27818272-27818291 MS.gene92155:intron 55.0%
GGAATCGACGAGACTGGAAG+CGG - chr2.4:27817093-27817112 MS.gene92155:intron 55.0%
GGATGAAGCAGATCGAGTCC+TGG - chr2.4:27818265-27818284 MS.gene92155:intron 55.0%
GTTGGTCGTACTGCAAGAGC+AGG - chr2.4:27819921-27819940 MS.gene92155:intron 55.0%
GTTTGGATCCCCTATGCTGC+TGG - chr2.4:27821180-27821199 MS.gene92155:CDS 55.0%
TCAGCAAGCCGCTGCAGAAT+CGG + chr2.4:27817141-27817160 None:intergenic 55.0%
TTGCGCTTCCGATTCTGCAG+CGG - chr2.4:27817130-27817149 MS.gene92155:intron 55.0%
! ATGTGGCGGTGGTGTTTTCG+GGG + chr2.4:27816954-27816973 None:intergenic 55.0%
! CAGAAAATGTAACGGGGGGC+GGG + chr2.4:27820064-27820083 None:intergenic 55.0%
! CGGATTGCCGTTGTTGTTGG+TGG - chr2.4:27817261-27817280 MS.gene92155:intron 55.0%
! TTGGTTCGTCGCTTCGGCTT+CGG - chr2.4:27817241-27817260 MS.gene92155:intron 55.0%
!! CGCTTTGAGCCTTGTTACCC+AGG - chr2.4:27819956-27819975 MS.gene92155:intron 55.0%
ATCCAAGCGGCTCCTTACCC+GGG - chr2.4:27818042-27818061 MS.gene92155:intron 60.0%
CCATTCGGAGAGGCCGAGAT+CGG + chr2.4:27816980-27816999 None:intergenic 60.0%
CGATCTCGGCCTCTCCGAAT+GGG - chr2.4:27816978-27816997 MS.gene92155:intron 60.0%
GAGATCGGAGAATGTGGCGG+TGG + chr2.4:27816965-27816984 None:intergenic 60.0%
GAGGCCGAGATCGGAGAATG+TGG + chr2.4:27816971-27816990 None:intergenic 60.0%
GCAACTGATGTTGCTGGCCG+TGG - chr2.4:27819741-27819760 MS.gene92155:CDS 60.0%
GCCGAGATCGGAGAATGTGG+CGG + chr2.4:27816968-27816987 None:intergenic 60.0%
GCGCGAGCTTGCGTTTCAGT+TGG - chr2.4:27817200-27817219 MS.gene92155:intron 60.0%
TGAAACGCAAGCTCGCGCGT+GGG + chr2.4:27817198-27817217 None:intergenic 60.0%
TGATGTTGCTGGCCGTGGTC+TGG - chr2.4:27819746-27819765 MS.gene92155:CDS 60.0%
TGGATCCCCTATGCTGCTGG+TGG - chr2.4:27821183-27821202 MS.gene92155:intron 60.0%
! AATGTAACGGGGGGCGGGAT+AGG + chr2.4:27820059-27820078 None:intergenic 60.0%
CCGATCTCGGCCTCTCCGAA+TGG - chr2.4:27816977-27816996 MS.gene92155:intron 65.0%
CTGAAACGCAAGCTCGCGCG+TGG + chr2.4:27817199-27817218 None:intergenic 65.0%
TCTCGGCCTCTCCGAATGGG+CGG - chr2.4:27816981-27817000 MS.gene92155:intron 65.0%
! CAGTGTTGTTGCACGCGCCG+TGG + chr2.4:27817039-27817058 None:intergenic 65.0%
! GCGGAGCAGTTTAGGGCGCT+TGG - chr2.4:27817222-27817241 MS.gene92155:intron 65.0%
! GGGCGCTTGGTTCGTCGCTT+CGG - chr2.4:27817235-27817254 MS.gene92155:intron 65.0%
!! GGCGGTGGTGTTTTCGGGGT+TGG + chr2.4:27816950-27816969 None:intergenic 65.0%
CACCCGGGTAAGGAGCCGCT+TGG + chr2.4:27818047-27818066 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 27816814 27822640 27816814 ID=MS.gene92155
chr2.4 mRNA 27816814 27822640 27816814 ID=MS.gene92155.t1;Parent=MS.gene92155
chr2.4 exon 27822044 27822640 27822044 ID=MS.gene92155.t1.exon1;Parent=MS.gene92155.t1
chr2.4 CDS 27822044 27822640 27822044 ID=cds.MS.gene92155.t1;Parent=MS.gene92155.t1
chr2.4 exon 27820878 27821200 27820878 ID=MS.gene92155.t1.exon2;Parent=MS.gene92155.t1
chr2.4 CDS 27820878 27821200 27820878 ID=cds.MS.gene92155.t1;Parent=MS.gene92155.t1
chr2.4 exon 27819643 27819846 27819643 ID=MS.gene92155.t1.exon3;Parent=MS.gene92155.t1
chr2.4 CDS 27819643 27819846 27819643 ID=cds.MS.gene92155.t1;Parent=MS.gene92155.t1
chr2.4 exon 27819477 27819558 27819477 ID=MS.gene92155.t1.exon4;Parent=MS.gene92155.t1
chr2.4 CDS 27819477 27819558 27819477 ID=cds.MS.gene92155.t1;Parent=MS.gene92155.t1
chr2.4 exon 27817366 27817464 27817366 ID=MS.gene92155.t1.exon5;Parent=MS.gene92155.t1
chr2.4 CDS 27817366 27817464 27817366 ID=cds.MS.gene92155.t1;Parent=MS.gene92155.t1
chr2.4 exon 27816814 27816837 27816814 ID=MS.gene92155.t1.exon6;Parent=MS.gene92155.t1
chr2.4 CDS 27816814 27816837 27816814 ID=cds.MS.gene92155.t1;Parent=MS.gene92155.t1
Gene Sequence

>MS.gene92155

ATGGAGCAACCACAACACCTTGTAGACCAAAATTTTCCACTCTTCAAACCATCTCGTAAACCCTCCATAAACCCTTCACTTCCCATTTCCAATAAACCTCAAAACGACGTCGTTACACACGAAACCCTTAATTCCAACCCCGAAAACACCACCGCCACATTCTCCGATCTCGGCCTCTCCGAATGGGCGGTAAAAACCTGCAAAGAACTCGGAATGAAAACTCCACGGCGCGTGCAACAACACTGCATCCCTCAAATTCTATCTGGCCGTCACGTGATTGGAATCGACGAGACTGGAAGCGGTAAAACGGCTGCATTTGCGCTTCCGATTCTGCAGCGGCTTGCTGAACATACGTTTGGTGTGTTTGCGCTTGTGGTGACGCCCACGCGCGAGCTTGCGTTTCAGTTGGCGGAGCAGTTTAGGGCGCTTGGTTCGTCGCTTCGGCTTCGGATTGCCGTTGTTGTTGGTGGTATGGATATGCTTAGACAGACTAAAGAGTTGGTTGCTAGGCCGCATCTTGTTATTGCTACTCCTGGGAGGATTAAGGTTTTGCTTAAGGATAATCCTGAAATTGCTCCGGTTTTCGCTAGGACTAAGGTAATTCGAATTCGTTGATTTGATCATTATGAATTTGGTGATGATTTTGTTTTTGTGTTTAATTTGATTGTGTTGTTGATTTTGAGACGTGTTTGGATAAATAACTTAATTAAGCGCTTAAAGCATTAACACTTACATGTCAGGCCTTATTTGGATAAACAACTTAACTTGCAAGTTATATCATGATTGCTTGTTATGATAAGCAATGATTATGTATAAGCTACTTTAACAAAAGATAAAATATAGTTAAAGTGTTTCGTATAAACAATAAGCTGTTTTCTAAAGCTATCTTGGAGAGCTTATGATAATAAGCTGAAAACAGTTTATGAATATGTTATTAGCTGTTTTCGTAAGTGTTTATGATGGTAAATATGATCAAATAATCCAGTCGAAACAGGCCCTGAGTTATTTTAATAACAAAAGATAACAAGTTGGGTTATTTCTATAACAAAAGATGAAATAAAAAGTCATACTATTCCCACATAAGCTAAAAGCTATTTTCATAAGTTATCATGAAGAGTTTATGGAAATGAGCTGAAAAGAGCTTATGGACATGTATATACATTTTTTGTTTCTATAAGCTCACTCAAGTAGTTAGTTAGTCACACAAGTGCTAAACTCAAATAAGCTAATCCAAGCGGCTCCTTACCCGGGTGAGTACAAATCTATCCATGATTGGAATATAGAATCTCTTTTGCATGTGTATGTGTTAGTAATCAAAATTGGATAATGTACTTGAATGGTTAAATAATAGAGATAATTTTGCATTGCATTGTTTTAAAACTTAATTAATAGATTAAGCATTATTATGATTATGCTGATATTTATGCATTGCTTTTGCAGTTTCTTGTCTTGGATGAAGCAGATCGAGTCCTGGATGTTGGTTTTCAGGATGAATTGAAATTTATATTTCAGTGCTTACCAGAAAACCGGCAAAACCTACTTTTTTCTGCAACAACAACTAGTAATTTACAAAAATTGCGTGAGCGTTATCAAGATAAGTTGTATGCCTTCGAAGCTTATGAAGGGTTTAAGACGGTTGAAAATCTTAAGCAACAGGTTGTATTCATCCCTAAAAATGTGAAGGATGTATATTTGTTGCACATCTTGTCTAAAATGGAAGATATGGGTATTAGGTCTGCCATCGTCTTTGTCTCCACATGCAGGTATCTTTCTAGATGATGTGTTTGAATTTTTCATAACCATTTTTTGTTACATGTATTTTGGCATGATATTCATTTTTATTCTCAAGTTCACAACTCTTTTTTTTTGGGGTTGCTATAGTAATAGAACCATGTTGCCACTTTCACTTTTTAGAACATTTGATTAAACAACCCTGCCTGCTATTTTTGTTTTTTTGTAGCTTATATTGTACTTCTGTCTTTCATTATTTTATTTTTATTTGATCATTAGGCTGTTATGTGTTTGTCTTAACTTCCCTCTTCCTCAGTGTCATTGTAATACCAACATGATAAAATTTGATTGTGTTAGTTTTGCATTTTCCCCTCGTTTGTTGTGGACAGTTTATTGGCAATAACTAGATATTATTAGCATTCTTTATGATTCCGAAGGACAATAAACACAGTTTCAAGCTTTTGGTTGTTGCCTCTCCAGAGTCCAGTCTAATAATTAAATGTCTGTTTGTGGATGAGATCGTCTCTCATTAAATAAAAGCTTTCATGATGTGCCAATTTTTTTGATTTGAAGTCCGGCATTGTAATCTTGGTAGTAGGCACTTGGCTTTTTGATGTTCCCTGCTTGCTAGTAGACATAGGGTGCAAGTAGGATTTCTTTCCTAAAATATGGGATACCCGTCTTTCAGCAGATAATGTGGACTATGGTTTACTCATTAATAGTTGGAAAGAATTCTGTGTTACTTTTAGTTAATGATTCAAATATAAAGATGAGTTTTATTTATTTGTATTCTATAGCAATTTTTTCCTCTGTTGCTTTTTCTATCTGTAGCATATTATAGCGGAGGAATTGGTAGAGTTAATCTTTGGTTCTGTTTTTACTGTTTATTCTTGGACATCAGAACTACTGTTCTGAGTCATGCTTGCTTACACTTGGTGTTGAAGTGGAGGTCTAATGGTGGAATCTTTTATGACGGTTATAACTAACAGATTATCCTAGGCAATTACATGTCCTTCTCTTTGTCTAAATATTTGTAGATACTCTAACAGTTCCCAAATTGCAGAGATTGTCATCGTTTAAATTTAATGCTGGAAGTGCTCGATCAAGAAGCTGCAGCTTTATATTCATTCAGATCACAGGCTCAGAGGCTTGAAGCACTTCATGACTTTAAATCGGGAAAGGTTCCTGTATTACTAGCAACTGATGTTGCTGGCCGTGGTCTGGATATACCTACAGTTGACCTTGTTATCAATTATGATGTTCCAAGGTTACTTTTCTTTTCCAAATTTGTTTTATTATTCGTTTACATTTGAAGCATTTGATGAAACGGATTTCGGCTATTCACATGTAGGTTTCCAAGAGATTATATCCATCGTGTTGGTCGTACTGCAAGAGCAGGTAGAGGGGGACTCGCTTTGAGCCTTGTTACCCAGGTAAGAGCAAACTTTGTTGTTTTTTATTTTCTGTTTCACTTCTGATCATAAAACTTTCACATGGTTTTCAATCTATTTCCTATCCCGCCCCCCGTTACATTTTCTGAAAGCAAATGGACACACCCTTACAAATTTCCTTCTTTTGTTTGAAGTCGAGTCTTCATTCATTGAATGCATTGGTTTTTTTCTTGTAATTCTCATGTTGACTGGTTGCTACGTCGGCACCATTTGTATGTTGAACATTGCTTCTCTGTCCACCTTATATAAATAGATAATGGAACTCAAAGCCATGAAAATTAGATGTCATGGTGAAAAATTTCATAAACATGATGAAAATTTCAAATTTTTGGCTTGGAAAATCAATAGCCCTGCCATCTTTATGCATTCTTTATATCAAAGCCCAGCTTTGGCTCCCTCATAAACATTACTGTGAAATAAATGCATTTGATTTTATGTACCAACACATACATCATGTTTAGGATCTCAATTATTCTAGTTGGATTCAAATGGTTATTTTTCCGAACTCATATCCTTAAGGTTGTTAATTGATGAAAGCGGGACTGTACCAGCAAATTGTTTAACTATCTACCCTTTGGCTTGGCATGGTCCTTTCTTTGTCATACAATTTAGTTGTTAAAATTGAACCTTATTTTATTGCCTATGTACAAAATGGGGCATGTCATGCAGATGACCAGTGATTGCCTTCTTTGTCTCATTTATATATTCCTTATCCTTATTTTTACACATGCACTTGCACATCTGTTCAGACATTTACTTTTTTGGGTTAAAGTGGTGGATCCTTCTGGAAGTTATCCAAAGCATTCACCACTCATCCCTTCCTAGTTACGTGCTATCTTCTAAACTACAAGCTTATTTATATCTTGAAATTTTGAACATCTACATAAAATGAGCAAGTCGAGTCATTGCAGCTGTTTATTTTTTTAATACTGATATTTGGATATTATACTATGCACTGAACTATTCTAGTTTTTGAAGTGTAGTTATGTAATGGTGTTGTAGGGAGATCGATCTTAAAGATATTTTGTCAAAAAAGAAAGGATGATTGTGTTGTGCTGTTTTTTTCCCCTTTTCGAACATTTTCTACTTGACAGAAACACAAGAGTTATTGATTTGAGATGTTTAACCAGAGTTAATTACCACTAAATTCTAAACTTTGCTTGTTGAAAAAACCTAGAGGGTATGTTTGGATCCCCTATGCTGCTGGTGGATTCTCAACAACTGAATTCAATATTGAGACCATGGCTTTGGTGATGTCAAATGTCCTTTCCTTAGCTTTAAAGAGGTTTACAAGACTTTTCTTAAACTGTACATGTGTCTTGGTGGAGACCCTTGAGTATGCTGTAACTTGCATCAAGATGTTCTATCAACATTTGATTAGTACTTCATTCATTTTCAAACCAAATTGTGTTCAATTCTGCAAATGCATCACAACAGAAACCACAATGTGTCATAAATCATACATATGTTCCTCTTTACTAATTTAAATTCAATACATTACAGATGAATTTCGGCCAAGAGAAAATTATAGTTAATAGGCATATAGGTTGTTCAGATACATGTCTGGATTTGGGTTTTCTGAAATATTTAAGATATTAGTGTTTTATTGAGGGAAAGTTTTAGGAAGTGGTTTATTGGGAAGATATTAGGAAAGTTATGAAGTTGTTTATTGGGAGGGAAAGACCAAGTTCTCTAATTTTTTGAAGGGAGAGACCAAGACTCTCGAATTTTTTGGAGGAAACTGCTGTTTGCTGTATCTATCCTTGATTTTTTTTGGGAGGAAACCATATCTAACTTTGTAATTAAATTCTGGCCACTGAACCAGAATTATTCAATAAAAGCCAGTATTCAATTCAGTTTCCTAGTTATGATTATGTTAGAAACTGGTACCAATTTACAACAGAAATAGAATTACACTCACTTTATAGAATGCACACAATTTAGGATTCTGCCTTTTGTTGTGCATTGATTTCCTCTTTTGCCACCATTTGCAGAATGATGTTGATCTCATTCGGGAAATAGAGACCCTTATTGAAAGGCAACTTGAAATGATTGAATACAAAGAAAATGAGGTCCTTTCTCTCATGAAAAAGGTATGTTTTTACAGGTGTAGCTTGTCCGTCTAAGCATTGAATTGCATATTAGATATTATTTGATTCTAGCTTTTTATTAAAATGATAATTATGTGCTATGTAAGACTTTTGTTAAAAAAAAAAGAATCCCTAACGACTTCTTTACTTTCTGATGCATTGCAGGTTTTCAGTGCTAAGAATGTTGCAAAAATGAAGATGATGGATGATGGGTTTGAAGAGAAAGCGAAAGAGCGGAAAAAACAGAAACTGAAAACGCTAGAAGAGAAAGGATTATTGAAGCAAAGAAGTAAGAGAAAAAGAAATAAAGAATTTCCAAAGGGAAATAAACAGGAAAAAGTGAAATTGGATACATCAGCAGATGTAACATCAATAAAGAAAAGGAGTAAAAAGAGAGAATAAATTGTTATATCTAGGATCTAGTAACTAAAATGATTGTTTCTCTAAACACGAAAAGAATTTGAAGATTGTTGCTCCAAAAATCAAGGATATCAGACAAGGTGAGATGTATTATTTTTTTGGTGGTGAAAGGTGAGATATATTAAAGTGGACTGA
Protein sequence

>MS.gene92155.t1

MEQPQHLVDQNFPLFKPSRKPSINPSLPISNKPQNDVVTHETLNSNPENTTATFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILSGRHVIGIDETGSGKTAAFALPILQRLAEHTFGVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKELVARPHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLLFSATTTSNLQKLRERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLHILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIREIETLIERQLEMIEYKENEVLSLMKKVRYIKVD