Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010144.t1 | XP_003615219.1 | 96.3 | 322 | 12 | 0 | 1 | 322 | 43 | 364 | 8.80E-181 | 642.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010144.t1 | Q07463 | 83.7 | 313 | 50 | 1 | 2 | 313 | 29 | 341 | 2.1e-154 | 546.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010144.t1 | G7KBE2 | 96.3 | 322 | 12 | 0 | 1 | 322 | 43 | 364 | 6.4e-181 | 642.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene068593 | MS.gene010144 | PPI |
MS.gene010144 | MS.gene027802 | PPI |
MS.gene069130 | MS.gene010144 | PPI |
MS.gene070896 | MS.gene010144 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010144.t1 | MTR_5g065270 | 96.273 | 322 | 12 | 0 | 1 | 322 | 43 | 364 | 0.0 | 649 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010144.t1 | AT3G21110 | 74.204 | 314 | 80 | 1 | 10 | 322 | 61 | 374 | 1.69e-176 | 496 |
MS.gene010144.t1 | AT3G21110 | 74.204 | 314 | 80 | 1 | 10 | 322 | 61 | 374 | 1.69e-176 | 496 |
MS.gene010144.t1 | AT3G21110 | 74.204 | 314 | 80 | 1 | 10 | 322 | 61 | 374 | 1.69e-176 | 496 |
Find 80 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTACTTTGCCGCGAATTT+TGG | 0.135114 | 5.2:+55197396 | None:intergenic |
GTAGACACTAAATATGAATT+TGG | 0.160237 | 5.2:-55192517 | MS.gene010144:CDS |
GGTGAAATTCAACCTTCTTT+TGG | 0.227916 | 5.2:-55197532 | MS.gene010144:CDS |
CAAAGATCTTGTTTGTGAAT+TGG | 0.265968 | 5.2:-55192014 | MS.gene010144:CDS |
CAATTCACAAACAAGATCTT+TGG | 0.290495 | 5.2:+55192015 | None:intergenic |
CTCCTGATTCAAGTAGATAT+TGG | 0.295724 | 5.2:-55192349 | MS.gene010144:CDS |
TCACAAACCTGGCCTTTAAA+AGG | 0.310522 | 5.2:+55197117 | None:intergenic |
AAATATGTATGAAGTGTAAA+AGG | 0.346185 | 5.2:+55191962 | None:intergenic |
GGTTGAATTTCACCTTGTTT+TGG | 0.355110 | 5.2:+55197541 | None:intergenic |
TACTTGGACTGCTTTCAAAA+TGG | 0.357335 | 5.2:-55192314 | MS.gene010144:CDS |
TAAATTACCTCGTCTTCATA+AGG | 0.360968 | 5.2:+55192128 | None:intergenic |
AAAGCAGTCCAAGTAAGAAT+TGG | 0.387718 | 5.2:+55192322 | None:intergenic |
AACTCACCAACAAACTCAAC+AGG | 0.389698 | 5.2:+55194440 | None:intergenic |
ATTTAGTGTCTACCAATATA+AGG | 0.390282 | 5.2:+55192527 | None:intergenic |
TTTAGGAGTTCTTGAGGTTG+TGG | 0.398832 | 5.2:-55192169 | MS.gene010144:intron |
CAGCAAGTGGCCTCGGACCA+CGG | 0.399678 | 5.2:-55192550 | MS.gene010144:CDS |
TTGGATTGCCAATTCTTACT+TGG | 0.402570 | 5.2:-55192330 | MS.gene010144:CDS |
ACTAGGCATCATACCTCATC+TGG | 0.405677 | 5.2:+55193320 | None:intergenic |
CTATGGACAGTGTACAATAA+AGG | 0.406741 | 5.2:-55193539 | MS.gene010144:CDS |
ATCCAATATCTACTTGAATC+AGG | 0.407961 | 5.2:+55192347 | None:intergenic |
GCTTTAAGGTTGTTTGAATA+CGG | 0.410229 | 5.2:-55192663 | MS.gene010144:CDS |
TAGACACTAAATATGAATTT+GGG | 0.414632 | 5.2:-55192516 | MS.gene010144:CDS |
TTTCTTGCAGATCATAGAAA+AGG | 0.417084 | 5.2:-55192727 | MS.gene010144:intron |
GAAGTACGGATACTTCTCTA+TGG | 0.419796 | 5.2:-55193556 | MS.gene010144:CDS |
GGCTTTGCAGCAAGTGGCCT+CGG | 0.419898 | 5.2:-55192557 | MS.gene010144:intron |
CTCGGACCACGGCCTTATAT+TGG | 0.424336 | 5.2:-55192539 | MS.gene010144:CDS |
AACGTCGTGATCTGCAGCTT+TGG | 0.425734 | 5.2:+55193352 | None:intergenic |
ACAAGATCTTTGGGAGCATC+AGG | 0.426348 | 5.2:+55192025 | None:intergenic |
TTCGAGATATTTATGACAGC+GGG | 0.431143 | 5.2:-55197203 | MS.gene010144:CDS |
AATTCACAAACAAGATCTTT+GGG | 0.433274 | 5.2:+55192016 | None:intergenic |
TGGCTTGGCGGTATGTCTAC+TGG | 0.448385 | 5.2:-55191994 | MS.gene010144:CDS |
AAATTACCTCGTCTTCATAA+GGG | 0.456536 | 5.2:+55192129 | None:intergenic |
CGTCATTGAAGCGCGAATCA+TGG | 0.465242 | 5.2:+55197564 | None:intergenic |
TGATCTGCAGCTTTGGTGGT+TGG | 0.469926 | 5.2:+55193359 | None:intergenic |
AGGAATAGTGAAATGAAGGT+TGG | 0.471235 | 5.2:+55197429 | None:intergenic |
ATTAGAGAGGGAAGAAGTGA+TGG | 0.487004 | 5.2:+55197465 | None:intergenic |
TTCTTGCAGATCATAGAAAA+GGG | 0.493602 | 5.2:-55192726 | MS.gene010144:intron |
GCGGTATGTCTACTGGCCCT+TGG | 0.494982 | 5.2:-55191987 | MS.gene010144:CDS |
ATCTTGTTTGTGAATTGGCT+TGG | 0.497027 | 5.2:-55192009 | MS.gene010144:CDS |
GTCGTGATCTGCAGCTTTGG+TGG | 0.510650 | 5.2:+55193355 | None:intergenic |
AACCTGGCCTTTAAAAGGAA+TGG | 0.519246 | 5.2:+55197122 | None:intergenic |
CATACCTCATCTGGAGTGAC+TGG | 0.522842 | 5.2:+55193329 | None:intergenic |
AGGATTTGTCACTGGAAGTA+CGG | 0.522857 | 5.2:-55193570 | MS.gene010144:CDS |
CAACTCAAATCCAAAATTCG+CGG | 0.523614 | 5.2:-55197406 | MS.gene010144:CDS |
AAGGTTGTTTGAATACGGAC+AGG | 0.523918 | 5.2:-55192658 | MS.gene010144:intron |
TTGTTTGTGAATTGGCTTGG+CGG | 0.524028 | 5.2:-55192006 | MS.gene010144:CDS |
GTTGAGGAATAGTGAAATGA+AGG | 0.530046 | 5.2:+55197425 | None:intergenic |
TGAGCCTGAAAATGTTGATA+AGG | 0.531013 | 5.2:-55192288 | MS.gene010144:intron |
ATCGTCAGAGTGCTTTCGAT+AGG | 0.538156 | 5.2:-55197155 | MS.gene010144:CDS |
CATAACTAACCAAGTCCAAA+GGG | 0.538917 | 5.2:+55191887 | None:intergenic |
TCGTCAGAGTGCTTTCGATA+GGG | 0.540013 | 5.2:-55197154 | MS.gene010144:CDS |
GAATTTGGGAAGGCAAATGA+TGG | 0.541143 | 5.2:-55192502 | MS.gene010144:CDS |
CTCAATTCTCACCATCAGGC+AGG | 0.550560 | 5.2:+55193492 | None:intergenic |
ATGAGAGTATCTCCAAAAGA+AGG | 0.573305 | 5.2:+55197520 | None:intergenic |
TTCAGAGAGACAATTAGAGA+GGG | 0.575946 | 5.2:+55197453 | None:intergenic |
AGTTTCTAATGCAGTTGTGT+CGG | 0.576754 | 5.2:-55194507 | MS.gene010144:CDS |
GCTTCAATGACGCCAAAACA+AGG | 0.580999 | 5.2:-55197553 | MS.gene010144:CDS |
ACTTATATAGTGAAATGTGC+CGG | 0.581395 | 5.2:-55191926 | MS.gene010144:CDS |
TTAGAGAGGGAAGAAGTGAT+GGG | 0.581751 | 5.2:+55197466 | None:intergenic |
GTAGCTAGAGGATTTGTCAC+TGG | 0.586075 | 5.2:-55193578 | MS.gene010144:intron |
ATGAAGTGTAAAAGGAGCCA+AGG | 0.587699 | 5.2:+55191970 | None:intergenic |
GCATAACTAACCAAGTCCAA+AGG | 0.589776 | 5.2:+55191886 | None:intergenic |
TTTCAGAGAGACAATTAGAG+AGG | 0.590732 | 5.2:+55197452 | None:intergenic |
TTAATGAGACAAGTCTGTGG+TGG | 0.599591 | 5.2:-55194550 | MS.gene010144:CDS |
ATCAATATTGTTGATTGATG+AGG | 0.603783 | 5.2:-55192479 | MS.gene010144:intron |
TGTGGAAATGTCCTGCCTGA+TGG | 0.610426 | 5.2:-55193503 | MS.gene010144:intron |
TGTCTACCAATATAAGGCCG+TGG | 0.612512 | 5.2:+55192533 | None:intergenic |
CAATATAAGGCCGTGGTCCG+AGG | 0.612937 | 5.2:+55192540 | None:intergenic |
CGTTCCAGTCACTCCAGATG+AGG | 0.615240 | 5.2:-55193333 | MS.gene010144:intron |
CAACTGCATTAGAAACTATG+TGG | 0.624118 | 5.2:+55194513 | None:intergenic |
CACTAAATATGAATTTGGGA+AGG | 0.627067 | 5.2:-55192512 | MS.gene010144:CDS |
TGAAGTGTAAAAGGAGCCAA+GGG | 0.638024 | 5.2:+55191971 | None:intergenic |
AAAGGCAATCGTAACTACTG+TGG | 0.638094 | 5.2:-55193521 | MS.gene010144:CDS |
GATCTTTGGGAGCATCAGGA+AGG | 0.642412 | 5.2:+55192029 | None:intergenic |
GTTCGAGATATTTATGACAG+CGG | 0.669366 | 5.2:-55197204 | MS.gene010144:CDS |
TAGAGAGGGAAGAAGTGATG+GGG | 0.705269 | 5.2:+55197467 | None:intergenic |
TTGCAACCCTTATGAAGACG+AGG | 0.711363 | 5.2:-55192135 | MS.gene010144:intron |
TTCTTAATGAGACAAGTCTG+TGG | 0.716151 | 5.2:-55194553 | MS.gene010144:CDS |
TCGAGATATTTATGACAGCG+GGG | 0.731522 | 5.2:-55197202 | MS.gene010144:CDS |
ACTCACCAACAAACTCAACA+GGG | 0.734307 | 5.2:+55194441 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTGATTGATAAATTTAT+AGG | - | chr5.2:55196304-55196323 | MS.gene010144:intron | 10.0% |
!! | AATTGATTGATAAATTTATA+GGG | - | chr5.2:55196305-55196324 | MS.gene010144:intron | 10.0% |
!! | CAATGTAAATAAAAATTAAT+GGG | + | chr5.2:55194776-55194795 | None:intergenic | 10.0% |
!!! | AATATCATCTAAAATAAAAT+TGG | - | chr5.2:55195142-55195161 | MS.gene010144:intron | 10.0% |
!!! | AATTTTATGATAATAATCAT+GGG | + | chr5.2:55196598-55196617 | None:intergenic | 10.0% |
!! | AAAAAAAATAAAAGGAATAG+AGG | + | chr5.2:55192688-55192707 | None:intergenic | 15.0% |
!! | AAAAAAATAAAAGGAATAGA+GGG | + | chr5.2:55192687-55192706 | None:intergenic | 15.0% |
!! | AATGAACAATATTATGATAA+TGG | - | chr5.2:55196495-55196514 | MS.gene010144:intron | 15.0% |
!! | ATATATTATCTTATTATCCA+AGG | + | chr5.2:55195378-55195397 | None:intergenic | 15.0% |
!! | CCAATGTAAATAAAAATTAA+TGG | + | chr5.2:55194777-55194796 | None:intergenic | 15.0% |
!! | CTACAAACAAAAAAAATAAA+AGG | + | chr5.2:55192696-55192715 | None:intergenic | 15.0% |
!! | GAAATTATGTTAAAAACTAT+AGG | + | chr5.2:55195110-55195129 | None:intergenic | 15.0% |
!! | TAAATTCAGATAATTATGAA+TGG | + | chr5.2:55195515-55195534 | None:intergenic | 15.0% |
!! | TAAGTATATAAATGTGATAA+TGG | - | chr5.2:55197055-55197074 | MS.gene010144:intron | 15.0% |
!! | TTGGATAATAAGATAATATA+TGG | - | chr5.2:55195377-55195396 | MS.gene010144:intron | 15.0% |
!! | TTTGTTTAAATTTGATAGAT+TGG | - | chr5.2:55193697-55193716 | MS.gene010144:intron | 15.0% |
!!! | ATGTTAATGTCTTTTAATAT+TGG | - | chr5.2:55195317-55195336 | MS.gene010144:intron | 15.0% |
!!! | ATTTATCAAACTTTTTATCA+CGG | - | chr5.2:55194652-55194671 | MS.gene010144:intron | 15.0% |
!!! | CCATTAATTTTTATTTACAT+TGG | - | chr5.2:55194774-55194793 | MS.gene010144:intron | 15.0% |
!!! | GAATTTTATGATAATAATCA+TGG | + | chr5.2:55196599-55196618 | None:intergenic | 15.0% |
!!! | TATTAATGTTATGCTTTTTT+AGG | - | chr5.2:55197268-55197287 | MS.gene010144:intron | 15.0% |
!!! | TATTTGAATTGTTTTAAAAG+TGG | - | chr5.2:55195805-55195824 | MS.gene010144:intron | 15.0% |
!!! | TTATGTATTGACAATTATTA+GGG | - | chr5.2:55192921-55192940 | MS.gene010144:intron | 15.0% |
!!! | TTGTTTTATATTTAGTAGTT+TGG | - | chr5.2:55194696-55194715 | MS.gene010144:intron | 15.0% |
!!! | TTTATGTATTGACAATTATT+AGG | - | chr5.2:55192920-55192939 | MS.gene010144:intron | 15.0% |
!! | AAATATGTATGAAGTGTAAA+AGG | + | chr5.2:55197495-55197514 | None:intergenic | 20.0% |
!! | AAATTATGTTAAACTGCAAT+AGG | - | chr5.2:55193530-55193549 | MS.gene010144:CDS | 20.0% |
!! | AACAAATCTGAATAGAAAAA+TGG | - | chr5.2:55193567-55193586 | MS.gene010144:CDS | 20.0% |
!! | AACGATTAATGATTAAATGA+AGG | + | chr5.2:55192780-55192799 | None:intergenic | 20.0% |
!! | AATAAAATTGGAATTTGAAG+AGG | - | chr5.2:55195154-55195173 | MS.gene010144:intron | 20.0% |
!! | AATGATCAAAAAGAAAATGT+TGG | - | chr5.2:55196214-55196233 | MS.gene010144:intron | 20.0% |
!! | AATTTCAAGATAAAACAATC+AGG | + | chr5.2:55194876-55194895 | None:intergenic | 20.0% |
!! | ACATAGAGGAAATTAAAATT+TGG | + | chr5.2:55196702-55196721 | None:intergenic | 20.0% |
!! | GTGATAAAAAGTTTGATAAA+TGG | + | chr5.2:55194653-55194672 | None:intergenic | 20.0% |
!! | TAGACACTAAATATGAATTT+GGG | - | chr5.2:55196938-55196957 | MS.gene010144:intron | 20.0% |
!! | TGTTTATTTACAGAGTTAAA+GGG | - | chr5.2:55192377-55192396 | MS.gene010144:intron | 20.0% |
!!! | AAAAGCATAACATTAATAGA+TGG | + | chr5.2:55197266-55197285 | None:intergenic | 20.0% |
!!! | AACGTAATTGAATTTCTTTT+TGG | - | chr5.2:55195253-55195272 | MS.gene010144:intron | 20.0% |
!!! | ACGTAATTGAATTTCTTTTT+GGG | - | chr5.2:55195254-55195273 | MS.gene010144:intron | 20.0% |
!!! | AGGATATCATTTTAAACAAA+AGG | + | chr5.2:55195358-55195377 | None:intergenic | 20.0% |
!!! | ATATGAGTTGATTTTTCTTT+AGG | - | chr5.2:55197401-55197420 | MS.gene010144:intron | 20.0% |
!!! | ATTGAGATTTCAAATTCTTT+TGG | - | chr5.2:55195979-55195998 | MS.gene010144:intron | 20.0% |
!!! | TTTGTTTAAAATGATATCCT+TGG | - | chr5.2:55195358-55195377 | MS.gene010144:intron | 20.0% |
! | AACCACTAAACCAATATTTA+GGG | + | chr5.2:55195454-55195473 | None:intergenic | 25.0% |
! | AACGACCAAAAAATTTAAAG+AGG | - | chr5.2:55192880-55192899 | MS.gene010144:intron | 25.0% |
! | AATAATGTTGAGAAACGTTT+GGG | - | chr5.2:55193264-55193283 | MS.gene010144:intron | 25.0% |
! | AATTCACAAACAAGATCTTT+GGG | + | chr5.2:55197441-55197460 | None:intergenic | 25.0% |
! | ACAAGTAGAAAAGTAAAACT+AGG | + | chr5.2:55196154-55196173 | None:intergenic | 25.0% |
! | ACGACCAAAAAATTTAAAGA+GGG | - | chr5.2:55192881-55192900 | MS.gene010144:intron | 25.0% |
! | ATAGGATATTATCATATGAC+AGG | - | chr5.2:55196032-55196051 | MS.gene010144:intron | 25.0% |
! | ATATGATAGATTGAATATGG+TGG | - | chr5.2:55194055-55194074 | MS.gene010144:intron | 25.0% |
! | ATATTATCATATGACAGGAA+TGG | - | chr5.2:55196037-55196056 | MS.gene010144:intron | 25.0% |
! | ATGATAATATCCTATTACAC+AGG | + | chr5.2:55196027-55196046 | None:intergenic | 25.0% |
! | ATTTAGTGTCTACCAATATA+AGG | + | chr5.2:55196930-55196949 | None:intergenic | 25.0% |
! | CAAAAAGAAAATGTTGGATT+TGG | - | chr5.2:55196220-55196239 | MS.gene010144:intron | 25.0% |
! | CTAAAATTGATTACACGAAT+TGG | + | chr5.2:55192459-55192478 | None:intergenic | 25.0% |
! | CTGTTTATTTACAGAGTTAA+AGG | - | chr5.2:55192376-55192395 | MS.gene010144:intron | 25.0% |
! | GGTAATAAGCTTATTTGTAT+AGG | - | chr5.2:55196817-55196836 | MS.gene010144:intron | 25.0% |
! | GGTATATGATAGATTGAATA+TGG | - | chr5.2:55194052-55194071 | MS.gene010144:intron | 25.0% |
! | GTAAAGCCATTATAAATACA+AGG | + | chr5.2:55195616-55195635 | None:intergenic | 25.0% |
! | GTAGACACTAAATATGAATT+TGG | - | chr5.2:55196937-55196956 | MS.gene010144:intron | 25.0% |
! | GTTTATTTACAGAGTTAAAG+GGG | - | chr5.2:55192378-55192397 | MS.gene010144:intron | 25.0% |
! | TAACCACTAAACCAATATTT+AGG | + | chr5.2:55195455-55195474 | None:intergenic | 25.0% |
! | TAATAAGATAATATATGGCG+TGG | - | chr5.2:55195382-55195401 | MS.gene010144:intron | 25.0% |
! | TAGCTTAATCAATGTAATGT+TGG | - | chr5.2:55192224-55192243 | MS.gene010144:intron | 25.0% |
! | TAGGAAGTTGTACAATTAAA+GGG | - | chr5.2:55195711-55195730 | MS.gene010144:intron | 25.0% |
! | TCATTCAGTATCATTCTATT+AGG | - | chr5.2:55194515-55194534 | MS.gene010144:CDS | 25.0% |
! | TGATAAATCAACTAGCTAAA+TGG | + | chr5.2:55196277-55196296 | None:intergenic | 25.0% |
! | TGATAATATCCTATTACACA+GGG | + | chr5.2:55196026-55196045 | None:intergenic | 25.0% |
! | TTATGTTGGTATATGATAGA+GGG | - | chr5.2:55194045-55194064 | MS.gene010144:intron | 25.0% |
! | TTTAAACTCTTGTTAGGAAA+TGG | - | chr5.2:55192569-55192588 | MS.gene010144:intron | 25.0% |
!! | ATCAATATTGTTGATTGATG+AGG | - | chr5.2:55196975-55196994 | MS.gene010144:intron | 25.0% |
!! | ATGTTGTTTAAACTCTTGTT+AGG | - | chr5.2:55192563-55192582 | MS.gene010144:intron | 25.0% |
!! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr5.2:55192180-55192199 | MS.gene010144:intron | 25.0% |
!! | TACATCAATCAAATGCTTTT+TGG | + | chr5.2:55192740-55192759 | None:intergenic | 25.0% |
!! | TACGTATTTTACAGAAGAAA+AGG | + | chr5.2:55195562-55195581 | None:intergenic | 25.0% |
!! | TTAAGTTGTTTATCCAAACA+GGG | - | chr5.2:55192181-55192200 | MS.gene010144:intron | 25.0% |
!!! | AAATTTGGTTCAAAAGCATT+TGG | - | chr5.2:55194015-55194034 | MS.gene010144:intron | 25.0% |
!!! | AATTTGGGTTTTTATCATCA+CGG | + | chr5.2:55194400-55194419 | None:intergenic | 25.0% |
!!! | AATTTGGTTCAAAAGCATTT+GGG | - | chr5.2:55194016-55194035 | MS.gene010144:intron | 25.0% |
!!! | AGTAGTCATATTTTAAGCAT+TGG | + | chr5.2:55192820-55192839 | None:intergenic | 25.0% |
!!! | TACTCCCTCTTTAAATTTTT+TGG | + | chr5.2:55192888-55192907 | None:intergenic | 25.0% |
!!! | TGTTTTAAAAGTGGATGTTT+AGG | - | chr5.2:55195814-55195833 | MS.gene010144:intron | 25.0% |
!!! | TTACTTTTCTACTTGTCATT+GGG | - | chr5.2:55196158-55196177 | MS.gene010144:intron | 25.0% |
!!! | TTGTTTTATCTTGAAATTGC+AGG | - | chr5.2:55194878-55194897 | MS.gene010144:intron | 25.0% |
!!! | TTTACTTTTCTACTTGTCAT+TGG | - | chr5.2:55196157-55196176 | MS.gene010144:intron | 25.0% |
!!! | TTTTTATTTTAACCAATCCC+CGG | + | chr5.2:55195297-55195316 | None:intergenic | 25.0% |
AAACGCTTATGTATGATAAG+CGG | - | chr5.2:55192139-55192158 | MS.gene010144:CDS | 30.0% | |
AAATTACCTCGTCTTCATAA+GGG | + | chr5.2:55197328-55197347 | None:intergenic | 30.0% | |
AACTTATGCGGTTATTATCA+GGG | - | chr5.2:55192962-55192981 | MS.gene010144:intron | 30.0% | |
AAGCAAGTGAAAAAGCTTTA+AGG | - | chr5.2:55196777-55196796 | MS.gene010144:intron | 30.0% | |
AATAATCATGGGATCATCAT+AGG | + | chr5.2:55196587-55196606 | None:intergenic | 30.0% | |
AATGATATCCTTGTACTCAT+CGG | - | chr5.2:55193862-55193881 | MS.gene010144:intron | 30.0% | |
ACAATAAAGCAAGCAAAATG+TGG | + | chr5.2:55196854-55196873 | None:intergenic | 30.0% | |
ACGATGATAAAATCCCAAAT+TGG | - | chr5.2:55193054-55193073 | MS.gene010144:intron | 30.0% | |
ACTTATATAGTGAAATGTGC+CGG | - | chr5.2:55197528-55197547 | MS.gene010144:CDS | 30.0% | |
AGAAATCTGCTTTCAATCTA+TGG | - | chr5.2:55193956-55193975 | MS.gene010144:intron | 30.0% | |
AGATTAGAAGGTAACTTATG+CGG | - | chr5.2:55192950-55192969 | MS.gene010144:intron | 30.0% | |
AGGAGTTATACAATCAATCT+AGG | - | chr5.2:55195692-55195711 | MS.gene010144:intron | 30.0% | |
AGTTTCCAATACTATCTAAC+TGG | + | chr5.2:55192636-55192655 | None:intergenic | 30.0% | |
ATACACTTATAAGAGTGAGA+TGG | - | chr5.2:55192479-55192498 | MS.gene010144:intron | 30.0% | |
ATATCAAATATGACCCTGTT+TGG | + | chr5.2:55192197-55192216 | None:intergenic | 30.0% | |
ATCCAATATCTACTTGAATC+AGG | + | chr5.2:55197110-55197129 | None:intergenic | 30.0% | |
CAAATAACAACTCTCTGTAT+TGG | + | chr5.2:55195045-55195064 | None:intergenic | 30.0% | |
CAATTCACAAACAAGATCTT+TGG | + | chr5.2:55197442-55197461 | None:intergenic | 30.0% | |
CACACACCTTGTATTTATAA+TGG | - | chr5.2:55195607-55195626 | MS.gene010144:intron | 30.0% | |
CACTAAATATGAATTTGGGA+AGG | - | chr5.2:55196942-55196961 | MS.gene010144:intron | 30.0% | |
CTAGGAAGTTGTACAATTAA+AGG | - | chr5.2:55195710-55195729 | MS.gene010144:intron | 30.0% | |
CTGAGATGTATATGAAACAT+GGG | - | chr5.2:55193753-55193772 | MS.gene010144:intron | 30.0% | |
CTTATGTTGGTATATGATAG+AGG | - | chr5.2:55194044-55194063 | MS.gene010144:intron | 30.0% | |
GAAAACCAGTTAGATAGTAT+TGG | - | chr5.2:55192628-55192647 | MS.gene010144:intron | 30.0% | |
GAATAATGTTGAGAAACGTT+TGG | - | chr5.2:55193263-55193282 | MS.gene010144:intron | 30.0% | |
GTGATGATAAAAACCCAAAT+TGG | - | chr5.2:55194399-55194418 | MS.gene010144:intron | 30.0% | |
TAAATTACCTCGTCTTCATA+AGG | + | chr5.2:55197329-55197348 | None:intergenic | 30.0% | |
TAACTTATGCGGTTATTATC+AGG | - | chr5.2:55192961-55192980 | MS.gene010144:intron | 30.0% | |
TATATGACAGAGGGAAAATT+TGG | - | chr5.2:55194000-55194019 | MS.gene010144:intron | 30.0% | |
TATTAGGAACCTTATGGTTT+AGG | - | chr5.2:55194531-55194550 | MS.gene010144:CDS | 30.0% | |
TCATTCTATTAGGAACCTTA+TGG | - | chr5.2:55194525-55194544 | MS.gene010144:CDS | 30.0% | |
TTAATCAATGTAATGTTGGC+AGG | - | chr5.2:55192228-55192247 | MS.gene010144:intron | 30.0% | |
TTAGGGAAGTTAAGATTAGA+AGG | - | chr5.2:55192938-55192957 | MS.gene010144:intron | 30.0% | |
TTCATTTGGTATATGACAGA+GGG | - | chr5.2:55194136-55194155 | MS.gene010144:intron | 30.0% | |
TTCCTAGTGTGAATGTTTAT+CGG | - | chr5.2:55193432-55193451 | MS.gene010144:intron | 30.0% | |
TTCGTTCAGTATCAATCTAT+TGG | - | chr5.2:55193169-55193188 | MS.gene010144:intron | 30.0% | |
TTCTTGCAGATCATAGAAAA+GGG | - | chr5.2:55196728-55196747 | MS.gene010144:intron | 30.0% | |
TTTCTTGCAGATCATAGAAA+AGG | - | chr5.2:55196727-55196746 | MS.gene010144:intron | 30.0% | |
! | AACACCTTATCAACATTTTC+AGG | + | chr5.2:55197173-55197192 | None:intergenic | 30.0% |
! | AATCTATGGATTGCTTCATT+TGG | - | chr5.2:55193970-55193989 | MS.gene010144:intron | 30.0% |
! | AGTGTAAAACTGGTTTACTT+TGG | - | chr5.2:55192534-55192553 | MS.gene010144:CDS | 30.0% |
! | CAAAGATCTTGTTTGTGAAT+TGG | - | chr5.2:55197440-55197459 | MS.gene010144:CDS | 30.0% |
! | GCTATTGTCACATTTTTATC+TGG | + | chr5.2:55194975-55194994 | None:intergenic | 30.0% |
! | GTTGGAGTGAGTATATTTTT+CGG | + | chr5.2:55196080-55196099 | None:intergenic | 30.0% |
! | TAGAGATTTAGTGGATACAT+TGG | - | chr5.2:55197237-55197256 | MS.gene010144:intron | 30.0% |
! | TATATGATAGAGGGAAGTTT+TGG | - | chr5.2:55194199-55194218 | MS.gene010144:intron | 30.0% |
! | TTTACATTTTCTACCGCTAA+TGG | - | chr5.2:55197345-55197364 | MS.gene010144:intron | 30.0% |
!! | ATCCCTAAATATTGGTTTAG+TGG | - | chr5.2:55195449-55195468 | MS.gene010144:intron | 30.0% |
!! | ATTTGGGTTTTTATCATCAC+GGG | + | chr5.2:55194399-55194418 | None:intergenic | 30.0% |
!! | GCTTTAAGGTTGTTTGAATA+CGG | - | chr5.2:55196791-55196810 | MS.gene010144:intron | 30.0% |
!! | TTTTTAGCAACTTATGAGGT+AGG | + | chr5.2:55196541-55196560 | None:intergenic | 30.0% |
!!! | AAAGTGCATTTTTTTCCCTT+TGG | - | chr5.2:55197552-55197571 | MS.gene010144:CDS | 30.0% |
!!! | AAGGATCCGTTTTTTAAAAG+GGG | + | chr5.2:55196361-55196380 | None:intergenic | 30.0% |
!!! | ACAAGGATCCGTTTTTTAAA+AGG | + | chr5.2:55196363-55196382 | None:intergenic | 30.0% |
!!! | CAAGGATCCGTTTTTTAAAA+GGG | + | chr5.2:55196362-55196381 | None:intergenic | 30.0% |
!!! | CTACTTTTTAGCAACTTATG+AGG | + | chr5.2:55196545-55196564 | None:intergenic | 30.0% |
!!! | TCAACAGTCTTTTTTGGATT+GGG | - | chr5.2:55195180-55195199 | MS.gene010144:intron | 30.0% |
AAAGCAGTCCAAGTAAGAAT+TGG | + | chr5.2:55197135-55197154 | None:intergenic | 35.0% | |
AAATCTCAATTCTCACCATC+AGG | + | chr5.2:55195969-55195988 | None:intergenic | 35.0% | |
AAATTACAGCCCTGTGTAAT+AGG | - | chr5.2:55196014-55196033 | MS.gene010144:intron | 35.0% | |
ACAAAATGGGACAAAACTCT+TGG | - | chr5.2:55193482-55193501 | MS.gene010144:intron | 35.0% | |
ACATTTCTCAAGCAAACTGA+AGG | - | chr5.2:55194290-55194309 | MS.gene010144:intron | 35.0% | |
AGGAATAGTGAAATGAAGGT+TGG | + | chr5.2:55192028-55192047 | None:intergenic | 35.0% | |
AGGGAAGAACAATACTCTTA+TGG | - | chr5.2:55193907-55193926 | MS.gene010144:intron | 35.0% | |
AGTTTCTAATGCAGTTGTGT+CGG | - | chr5.2:55194947-55194966 | MS.gene010144:intron | 35.0% | |
ATACCAAATGAAGCAATCCA+TGG | + | chr5.2:55193976-55193995 | None:intergenic | 35.0% | |
ATCGGATGTTAGTGTAAAAC+TGG | - | chr5.2:55192524-55192543 | MS.gene010144:CDS | 35.0% | |
ATGCAATCTTTGACACACAT+TGG | - | chr5.2:55197002-55197021 | MS.gene010144:intron | 35.0% | |
CAAAATATGTGTCAAGGTGA+TGG | + | chr5.2:55195849-55195868 | None:intergenic | 35.0% | |
CAAAATGGGACAAAACTCTT+GGG | - | chr5.2:55193483-55193502 | MS.gene010144:intron | 35.0% | |
CAACTCAAATCCAAAATTCG+CGG | - | chr5.2:55192048-55192067 | MS.gene010144:intron | 35.0% | |
CAACTGCATTAGAAACTATG+TGG | + | chr5.2:55194944-55194963 | None:intergenic | 35.0% | |
CACAAGCAAAATATGTGTCA+AGG | + | chr5.2:55195855-55195874 | None:intergenic | 35.0% | |
CACACTAGGAAGAGTAAAAT+TGG | + | chr5.2:55193423-55193442 | None:intergenic | 35.0% | |
CATTTCTCAAGCAAACTGAA+GGG | - | chr5.2:55194291-55194310 | MS.gene010144:intron | 35.0% | |
CTATGGACAGTGTACAATAA+AGG | - | chr5.2:55195915-55195934 | MS.gene010144:intron | 35.0% | |
CTATTACTCTTCTTTCTGCT+AGG | + | chr5.2:55194320-55194339 | None:intergenic | 35.0% | |
CTCCTGATTCAAGTAGATAT+TGG | - | chr5.2:55197105-55197124 | MS.gene010144:intron | 35.0% | |
CTTCATTTGGTATATGACAG+AGG | - | chr5.2:55194135-55194154 | MS.gene010144:intron | 35.0% | |
GAAGAACAATACTCTTATGG+TGG | - | chr5.2:55193910-55193929 | MS.gene010144:intron | 35.0% | |
GAATCCATTAGAAGAACTCA+TGG | - | chr5.2:55193354-55193373 | MS.gene010144:CDS | 35.0% | |
GAGCAGGAAACTAATAGATA+AGG | + | chr5.2:55196339-55196358 | None:intergenic | 35.0% | |
GATAAAAACCCAAATTGGAG+AGG | - | chr5.2:55194404-55194423 | MS.gene010144:intron | 35.0% | |
GATAAAATCCCAAATTGGAG+AGG | - | chr5.2:55193059-55193078 | MS.gene010144:intron | 35.0% | |
GATGAAAAGAATCACAAACC+TGG | + | chr5.2:55192351-55192370 | None:intergenic | 35.0% | |
GCTACACAATAATCCATTAG+CGG | + | chr5.2:55197361-55197380 | None:intergenic | 35.0% | |
GCTGAGATGTATATGAAACA+TGG | - | chr5.2:55193752-55193771 | MS.gene010144:intron | 35.0% | |
GCTTGACTTTACAATTTGAC+TGG | - | chr5.2:55196876-55196895 | MS.gene010144:intron | 35.0% | |
GGATTGCTTCATTTGGTATA+TGG | - | chr5.2:55193977-55193996 | MS.gene010144:intron | 35.0% | |
GGTATATGGTATATGACAGA+GGG | - | chr5.2:55193991-55194010 | MS.gene010144:intron | 35.0% | |
GTGGTTACTGAATATGAACA+TGG | - | chr5.2:55193929-55193948 | MS.gene010144:intron | 35.0% | |
GTGTAGAAGCAAATCTCAAA+GGG | - | chr5.2:55193289-55193308 | MS.gene010144:intron | 35.0% | |
GTTCGAGATATTTATGACAG+CGG | - | chr5.2:55192250-55192269 | MS.gene010144:intron | 35.0% | |
GTTGAGGAATAGTGAAATGA+AGG | + | chr5.2:55192032-55192051 | None:intergenic | 35.0% | |
TAAAAACAACCTTGTCCTCA+AGG | + | chr5.2:55194356-55194375 | None:intergenic | 35.0% | |
TACTTGGACTGCTTTCAAAA+TGG | - | chr5.2:55197140-55197159 | MS.gene010144:CDS | 35.0% | |
TATCTATGATCAGTGATGCT+GGG | - | chr5.2:55196456-55196475 | MS.gene010144:intron | 35.0% | |
TCAAATAGAGGTTGTAGCAA+TGG | - | chr5.2:55193615-55193634 | MS.gene010144:intron | 35.0% | |
TGAGCCTGAAAATGTTGATA+AGG | - | chr5.2:55197166-55197185 | MS.gene010144:CDS | 35.0% | |
TGCAAGAAAATGCAACATAG+AGG | + | chr5.2:55196716-55196735 | None:intergenic | 35.0% | |
TGCGAAAAGTTATCCATTTC+TGG | + | chr5.2:55196667-55196686 | None:intergenic | 35.0% | |
TGGACAGAAAAGTAGACAAT+AGG | - | chr5.2:55196240-55196259 | MS.gene010144:intron | 35.0% | |
TGGTATATGGTATATGACAG+AGG | - | chr5.2:55193990-55194009 | MS.gene010144:intron | 35.0% | |
TGTTGCTGTATTATCTGTAG+GGG | - | chr5.2:55193003-55193022 | MS.gene010144:intron | 35.0% | |
TTACTGAATATGAACATGGC+TGG | - | chr5.2:55193933-55193952 | MS.gene010144:intron | 35.0% | |
TTATCTATGATCAGTGATGC+TGG | - | chr5.2:55196455-55196474 | MS.gene010144:intron | 35.0% | |
TTCAGAGAGACAATTAGAGA+GGG | + | chr5.2:55192004-55192023 | None:intergenic | 35.0% | |
TTCCGATCGCATTACAAAAT+GGG | - | chr5.2:55193469-55193488 | MS.gene010144:intron | 35.0% | |
TTCGAGATATTTATGACAGC+GGG | - | chr5.2:55192251-55192270 | MS.gene010144:intron | 35.0% | |
TTCTTAATGAGACAAGTCTG+TGG | - | chr5.2:55194901-55194920 | MS.gene010144:intron | 35.0% | |
TTGGATTGCCAATTCTTACT+TGG | - | chr5.2:55197124-55197143 | MS.gene010144:intron | 35.0% | |
TTTCAGAGAGACAATTAGAG+AGG | + | chr5.2:55192005-55192024 | None:intergenic | 35.0% | |
TTTCATATACATCTCAGCCA+AGG | + | chr5.2:55193750-55193769 | None:intergenic | 35.0% | |
! | AATCCATGGATTGCTTCATT+TGG | - | chr5.2:55194122-55194141 | MS.gene010144:intron | 35.0% |
! | ATCTTGTTTGTGAATTGGCT+TGG | - | chr5.2:55197445-55197464 | MS.gene010144:CDS | 35.0% |
! | CTTCTTAGATTGAGTATTGC+TGG | - | chr5.2:55197212-55197231 | MS.gene010144:intron | 35.0% |
! | CTTGCTTCCATTCCTTTTAA+AGG | - | chr5.2:55192325-55192344 | MS.gene010144:CDS | 35.0% |
! | GGGAAAAAAATGCACTTTTC+CGG | + | chr5.2:55197550-55197569 | None:intergenic | 35.0% |
! | GGTGAAATTCAACCTTCTTT+TGG | - | chr5.2:55191922-55191941 | MS.gene010144:CDS | 35.0% |
! | GTAAAACAATGGACTCTCAT+CGG | - | chr5.2:55192506-55192525 | MS.gene010144:CDS | 35.0% |
! | GTGTTGCTGTATTATCTGTA+GGG | - | chr5.2:55193002-55193021 | MS.gene010144:intron | 35.0% |
! | TATTTAGTAAGCACTAGCCT+AGG | - | chr5.2:55195655-55195674 | MS.gene010144:intron | 35.0% |
! | TGTGTTGCTGTATTATCTGT+AGG | - | chr5.2:55193001-55193020 | MS.gene010144:intron | 35.0% |
!! | AAGGCATTGAGAGGAATTTA+TGG | - | chr5.2:55193809-55193828 | MS.gene010144:intron | 35.0% |
!! | AGGCATTGAGAGGAATTTAT+GGG | - | chr5.2:55193810-55193829 | MS.gene010144:intron | 35.0% |
!! | ATAAGAGTATTGTTCTTCCC+TGG | + | chr5.2:55193908-55193927 | None:intergenic | 35.0% |
!! | ATGAGAGTATCTCCAAAAGA+AGG | + | chr5.2:55191937-55191956 | None:intergenic | 35.0% |
!! | ATGCCTTCTTTTAGTTAGTG+AGG | - | chr5.2:55196626-55196645 | MS.gene010144:intron | 35.0% |
!! | GATGTCTGCTTTTCAAATAG+AGG | - | chr5.2:55193603-55193622 | MS.gene010144:intron | 35.0% |
!! | GGAAGAGTATCCCTAAATAT+TGG | - | chr5.2:55195441-55195460 | MS.gene010144:intron | 35.0% |
!! | GGTTGAATTTCACCTTGTTT+TGG | + | chr5.2:55191916-55191935 | None:intergenic | 35.0% |
!! | TTGCTGGTTTAGAGATTTAG+TGG | - | chr5.2:55197228-55197247 | MS.gene010144:intron | 35.0% |
!!! | CATTTTTTTCCCTTTGGACT+TGG | - | chr5.2:55197558-55197577 | MS.gene010144:CDS | 35.0% |
!!! | CGAATTTTGGATTTGAGTTG+AGG | + | chr5.2:55192048-55192067 | None:intergenic | 35.0% |
!!! | GTCAACAGTCTTTTTTGGAT+TGG | - | chr5.2:55195179-55195198 | MS.gene010144:intron | 35.0% |
!!! | TGAGGACAAGGTTGTTTTTA+AGG | - | chr5.2:55194356-55194375 | MS.gene010144:intron | 35.0% |
!!! | TGCTTTTTTAGGAGTTCTTG+AGG | - | chr5.2:55197279-55197298 | MS.gene010144:intron | 35.0% |
AAACTGTAGCAGTAACTGCT+TGG | - | chr5.2:55192651-55192670 | MS.gene010144:intron | 40.0% | |
AAAGGCAATCGTAACTACTG+TGG | - | chr5.2:55195933-55195952 | MS.gene010144:intron | 40.0% | |
AACCCAAATTGGAGAGGAAA+TGG | - | chr5.2:55194410-55194429 | MS.gene010144:intron | 40.0% | |
AACTCACCAACAAACTCAAC+AGG | + | chr5.2:55195017-55195036 | None:intergenic | 40.0% | |
AAGGTTGTTTGAATACGGAC+AGG | - | chr5.2:55196796-55196815 | MS.gene010144:intron | 40.0% | |
AAGTTAGTTAGAGAGTGGAG+GGG | - | chr5.2:55194442-55194461 | MS.gene010144:intron | 40.0% | |
AATAGAGGTTGTAGCAATGG+AGG | - | chr5.2:55193618-55193637 | MS.gene010144:intron | 40.0% | |
ACAAGTGGTTGTTGTATGGA+AGG | - | chr5.2:55193790-55193809 | MS.gene010144:intron | 40.0% | |
ACGCCTCACTAACTAAAAGA+AGG | + | chr5.2:55196632-55196651 | None:intergenic | 40.0% | |
ACTCACCAACAAACTCAACA+GGG | + | chr5.2:55195016-55195035 | None:intergenic | 40.0% | |
AGAAACCATTTCCAACCTTG+AGG | - | chr5.2:55194338-55194357 | MS.gene010144:intron | 40.0% | |
AGAGAAATGTCTCTTCTCTG+AGG | - | chr5.2:55193197-55193216 | MS.gene010144:intron | 40.0% | |
AGCACCATGAGTTCTTCTAA+TGG | + | chr5.2:55193361-55193380 | None:intergenic | 40.0% | |
AGGATTTGTCACTGGAAGTA+CGG | - | chr5.2:55195884-55195903 | MS.gene010144:intron | 40.0% | |
ATGAAGTGTAAAAGGAGCCA+AGG | + | chr5.2:55197487-55197506 | None:intergenic | 40.0% | |
ATTAGAGAGGGAAGAAGTGA+TGG | + | chr5.2:55191992-55192011 | None:intergenic | 40.0% | |
ATTCAATCGCTCAGCCATTT+GGG | + | chr5.2:55193247-55193266 | None:intergenic | 40.0% | |
CAAGTTAGTTAGAGAGTGGA+GGG | - | chr5.2:55194441-55194460 | MS.gene010144:intron | 40.0% | |
CACCATTTCCTCTCCAATTT+GGG | + | chr5.2:55194415-55194434 | None:intergenic | 40.0% | |
CCTAGGAAGTTGAATACTCT+AGG | - | chr5.2:55195672-55195691 | MS.gene010144:intron | 40.0% | |
CGTGTAGAAGCAAATCTCAA+AGG | - | chr5.2:55193288-55193307 | MS.gene010144:intron | 40.0% | |
CTCCGATAAACATTCACACT+AGG | + | chr5.2:55193437-55193456 | None:intergenic | 40.0% | |
CTCTCTCTACCTAAACCATA+AGG | + | chr5.2:55194543-55194562 | None:intergenic | 40.0% | |
CTTATAAGAGTGAGATGGTG+TGG | - | chr5.2:55192484-55192503 | MS.gene010144:CDS | 40.0% | |
CTTCCGATCGCATTACAAAA+TGG | - | chr5.2:55193468-55193487 | MS.gene010144:intron | 40.0% | |
CTTTGCATGATTCACTCTGA+TGG | - | chr5.2:55192606-55192625 | MS.gene010144:intron | 40.0% | |
GAAGTACGGATACTTCTCTA+TGG | - | chr5.2:55195898-55195917 | MS.gene010144:intron | 40.0% | |
GAATTTGGGAAGGCAAATGA+TGG | - | chr5.2:55196952-55196971 | MS.gene010144:intron | 40.0% | |
GACGTTGAAGATTTAGCACA+AGG | + | chr5.2:55196380-55196399 | None:intergenic | 40.0% | |
GAGATGGTGTGGTAAAACAA+TGG | - | chr5.2:55192495-55192514 | MS.gene010144:CDS | 40.0% | |
GATGTATATGAAACATGGGC+TGG | - | chr5.2:55193757-55193776 | MS.gene010144:intron | 40.0% | |
GGTTCTATGTTCCTAACTAC+AGG | - | chr5.2:55197076-55197095 | MS.gene010144:intron | 40.0% | |
GTCTTCTTTCAAAACCTGTG+TGG | - | chr5.2:55194796-55194815 | MS.gene010144:intron | 40.0% | |
GTTGCTGTATTATCTGTAGG+GGG | - | chr5.2:55193004-55193023 | MS.gene010144:intron | 40.0% | |
TATTCAATCGCTCAGCCATT+TGG | + | chr5.2:55193248-55193267 | None:intergenic | 40.0% | |
TCACCATTTCCTCTCCAATT+TGG | + | chr5.2:55194416-55194435 | None:intergenic | 40.0% | |
TCGAGATATTTATGACAGCG+GGG | - | chr5.2:55192252-55192271 | MS.gene010144:intron | 40.0% | |
TGAAGTGTAAAAGGAGCCAA+GGG | + | chr5.2:55197486-55197505 | None:intergenic | 40.0% | |
TGAGACTTTGTGAACTACCT+TGG | - | chr5.2:55193730-55193749 | MS.gene010144:intron | 40.0% | |
TGGGGATTAGAGCTTTCTTA+AGG | - | chr5.2:55195203-55195222 | MS.gene010144:intron | 40.0% | |
TTAAGGCGGTGACAATGATA+AGG | - | chr5.2:55194373-55194392 | MS.gene010144:intron | 40.0% | |
TTAATGAGACAAGTCTGTGG+TGG | - | chr5.2:55194904-55194923 | MS.gene010144:intron | 40.0% | |
TTAGAGAGGGAAGAAGTGAT+GGG | + | chr5.2:55191991-55192010 | None:intergenic | 40.0% | |
TTGCTGTATTATCTGTAGGG+GGG | - | chr5.2:55193005-55193024 | MS.gene010144:intron | 40.0% | |
TTTAGGAGTTCTTGAGGTTG+TGG | - | chr5.2:55197285-55197304 | MS.gene010144:intron | 40.0% | |
! | AACCTGGCCTTTAAAAGGAA+TGG | + | chr5.2:55192335-55192354 | None:intergenic | 40.0% |
! | ACTTACTTTGCCGCGAATTT+TGG | + | chr5.2:55192061-55192080 | None:intergenic | 40.0% |
! | AGGAGTATGAACCTGTAGTT+AGG | + | chr5.2:55197090-55197109 | None:intergenic | 40.0% |
! | AGTATAAGAGGTGTGTAGGA+GGG | - | chr5.2:55193137-55193156 | MS.gene010144:intron | 40.0% |
! | CATGGATTGAAAGCAGAAAG+CGG | + | chr5.2:55194110-55194129 | None:intergenic | 40.0% |
! | CATTTGGTTGCTGCTTATGT+TGG | - | chr5.2:55194176-55194195 | MS.gene010144:intron | 40.0% |
! | CCTAGAGTATTCAACTTCCT+AGG | + | chr5.2:55195675-55195694 | None:intergenic | 40.0% |
! | GTCCCATTTTGTAATGCGAT+CGG | + | chr5.2:55193474-55193493 | None:intergenic | 40.0% |
! | GTTTTCCCTGTTGAGTTTGT+TGG | - | chr5.2:55195008-55195027 | MS.gene010144:intron | 40.0% |
! | TCACAAACCTGGCCTTTAAA+AGG | + | chr5.2:55192340-55192359 | None:intergenic | 40.0% |
! | TTTTGCTTGTGTGTAGCTAG+AGG | - | chr5.2:55195864-55195883 | MS.gene010144:intron | 40.0% |
!! | AGTTTTGGTCCTCAAGCATT+TGG | - | chr5.2:55194214-55194233 | MS.gene010144:intron | 40.0% |
!! | ATGTGTCAAGGTGATGGTTT+TGG | + | chr5.2:55195843-55195862 | None:intergenic | 40.0% |
!! | CAAATGCTTTTTGGTCTGTG+TGG | + | chr5.2:55192731-55192750 | None:intergenic | 40.0% |
!! | CCTGCTCCCCTTTTAAAAAA+CGG | - | chr5.2:55196352-55196371 | MS.gene010144:intron | 40.0% |
!! | GTTCATTATTTCTGCTGACC+AGG | + | chr5.2:55196482-55196501 | None:intergenic | 40.0% |
!! | GTTTTGGTCCTCAAGCATTT+GGG | - | chr5.2:55194215-55194234 | MS.gene010144:intron | 40.0% |
!! | TTCCATTCCTTTTAAAGGCC+AGG | - | chr5.2:55192330-55192349 | MS.gene010144:CDS | 40.0% |
!! | TTCTTTTAGTTAGTGAGGCG+TGG | - | chr5.2:55196631-55196650 | MS.gene010144:intron | 40.0% |
!! | TTGTTTGTGAATTGGCTTGG+CGG | - | chr5.2:55197448-55197467 | MS.gene010144:CDS | 40.0% |
!!! | ACAGTCTTTTTTGGATTGGG+TGG | - | chr5.2:55195183-55195202 | MS.gene010144:intron | 40.0% |
!!! | AGGCAGTCAACAGTCTTTTT+TGG | - | chr5.2:55195174-55195193 | MS.gene010144:intron | 40.0% |
!!! | AGTCTTTTTTGGATTGGGTG+GGG | - | chr5.2:55195185-55195204 | MS.gene010144:intron | 40.0% |
!!! | CAGTCTTTTTTGGATTGGGT+GGG | - | chr5.2:55195184-55195203 | MS.gene010144:intron | 40.0% |
!!! | GGACAAGGTTGTTTTTAAGG+CGG | - | chr5.2:55194359-55194378 | MS.gene010144:intron | 40.0% |
AACAACCTTGTCCTCAAGGT+TGG | + | chr5.2:55194352-55194371 | None:intergenic | 45.0% | |
AAGTTAGTTAGAGAGCGGAG+GGG | - | chr5.2:55193097-55193116 | MS.gene010144:intron | 45.0% | |
AATGCAAATGCTAACGTCCG+GGG | - | chr5.2:55195277-55195296 | MS.gene010144:intron | 45.0% | |
ACGCACAAGTGGTTGTTGTA+TGG | - | chr5.2:55193786-55193805 | MS.gene010144:intron | 45.0% | |
ACTAGGCATCATACCTCATC+TGG | + | chr5.2:55196137-55196156 | None:intergenic | 45.0% | |
ATAGTAACCATCGACCAACC+AGG | + | chr5.2:55194835-55194854 | None:intergenic | 45.0% | |
ATATGGCGTGGATGTATGCT+TGG | - | chr5.2:55195394-55195413 | MS.gene010144:intron | 45.0% | |
ATCCCAAATTGGAGAGGAAG+TGG | - | chr5.2:55193065-55193084 | MS.gene010144:intron | 45.0% | |
CAAGTTAGTTAGAGAGCGGA+GGG | - | chr5.2:55193096-55193115 | MS.gene010144:intron | 45.0% | |
CACCACTTCCTCTCCAATTT+GGG | + | chr5.2:55193070-55193089 | None:intergenic | 45.0% | |
CATTTCCAACCTTGAGGACA+AGG | - | chr5.2:55194344-55194363 | MS.gene010144:intron | 45.0% | |
CGCTTTCTGCTTTCAATCCA+TGG | - | chr5.2:55194108-55194127 | MS.gene010144:intron | 45.0% | |
CTGGCAAGTTAGTTAGAGAG+CGG | - | chr5.2:55193092-55193111 | MS.gene010144:intron | 45.0% | |
CTGGCAAGTTAGTTAGAGAG+TGG | - | chr5.2:55193092-55193111 | MS.gene010144:intron | 45.0% | |
CTTGTCCTCAAGGTTGGAAA+TGG | + | chr5.2:55194346-55194365 | None:intergenic | 45.0% | |
GAAAATCCCTTCTACCTGGT+TGG | - | chr5.2:55194818-55194837 | MS.gene010144:intron | 45.0% | |
GAATGCAAATGCTAACGTCC+GGG | - | chr5.2:55195276-55195295 | MS.gene010144:intron | 45.0% | |
GCAAGTTAGTTAGAGAGTGG+AGG | - | chr5.2:55194440-55194459 | MS.gene010144:intron | 45.0% | |
GCTTCAATGACGCCAAAACA+AGG | - | chr5.2:55191901-55191920 | MS.gene010144:CDS | 45.0% | |
GGAATGCAAATGCTAACGTC+CGG | - | chr5.2:55195275-55195294 | MS.gene010144:intron | 45.0% | |
GTAGCTAGAGGATTTGTCAC+TGG | - | chr5.2:55195876-55195895 | MS.gene010144:intron | 45.0% | |
TAGAGAGGGAAGAAGTGATG+GGG | + | chr5.2:55191990-55192009 | None:intergenic | 45.0% | |
TCAAGCCATTGAAGACACTC+AGG | + | chr5.2:55194263-55194282 | None:intergenic | 45.0% | |
TCACCACTTCCTCTCCAATT+TGG | + | chr5.2:55193071-55193090 | None:intergenic | 45.0% | |
TCCAACCTGAGTGTCTTCAA+TGG | - | chr5.2:55194255-55194274 | MS.gene010144:intron | 45.0% | |
TGACCAGACAATGTGATCCA+GGG | - | chr5.2:55193888-55193907 | MS.gene010144:intron | 45.0% | |
TGCTGTATTATCTGTAGGGG+GGG | - | chr5.2:55193006-55193025 | MS.gene010144:intron | 45.0% | |
TGTCTACCAATATAAGGCCG+TGG | + | chr5.2:55196924-55196943 | None:intergenic | 45.0% | |
TGTGGAAAATCCCTTCTACC+TGG | - | chr5.2:55194814-55194833 | MS.gene010144:intron | 45.0% | |
TGTTTATCGGAGTCGAGTCA+TGG | - | chr5.2:55193445-55193464 | MS.gene010144:intron | 45.0% | |
TTGCAACCCTTATGAAGACG+AGG | - | chr5.2:55197319-55197338 | MS.gene010144:intron | 45.0% | |
! | AGGGAGTATAAGAGGTGTGT+AGG | - | chr5.2:55193133-55193152 | MS.gene010144:intron | 45.0% |
! | ATCGTCAGAGTGCTTTCGAT+AGG | - | chr5.2:55192299-55192318 | MS.gene010144:CDS | 45.0% |
! | CTCTGAGGATCTTATGCTCT+GGG | - | chr5.2:55194574-55194593 | MS.gene010144:intron | 45.0% |
! | GAGTATAAGAGGTGTGTAGG+AGG | - | chr5.2:55193136-55193155 | MS.gene010144:intron | 45.0% |
! | GTAGAAGGGATTTTCCACAC+AGG | + | chr5.2:55194813-55194832 | None:intergenic | 45.0% |
! | TCGTCAGAGTGCTTTCGATA+GGG | - | chr5.2:55192300-55192319 | MS.gene010144:CDS | 45.0% |
! | TCTCTGAGGATCTTATGCTC+TGG | - | chr5.2:55194573-55194592 | MS.gene010144:intron | 45.0% |
! | TGAGGAGATTCAGCTTGCTT+TGG | - | chr5.2:55193330-55193349 | MS.gene010144:intron | 45.0% |
!! | ACAAGATCTTTGGGAGCATC+AGG | + | chr5.2:55197432-55197451 | None:intergenic | 45.0% |
!! | CATTTGGGTGCTGCTTATGT+TGG | - | chr5.2:55194031-55194050 | MS.gene010144:intron | 45.0% |
!! | GTTGTATGGAAGGCATTGAG+AGG | - | chr5.2:55193800-55193819 | MS.gene010144:intron | 45.0% |
!! | TGGTACTGGTCTTCCAGAAA+TGG | - | chr5.2:55196651-55196670 | MS.gene010144:intron | 45.0% |
!!! | CCGTTTTTTAAAAGGGGAGC+AGG | + | chr5.2:55196355-55196374 | None:intergenic | 45.0% |
!!! | ATTTTTTTGTTTAATTATTT+TGG | - | chr5.2:55195420-55195439 | MS.gene010144:intron | 5.0% |
AAATGCTAACGTCCGGGGAT+TGG | - | chr5.2:55195282-55195301 | MS.gene010144:intron | 50.0% | |
AACGTCGTGATCTGCAGCTT+TGG | + | chr5.2:55196105-55196124 | None:intergenic | 50.0% | |
AGGTGTGTAGGAGGGAAAGA+GGG | - | chr5.2:55193145-55193164 | MS.gene010144:intron | 50.0% | |
CACTTGCACCCAAATGCTTG+AGG | + | chr5.2:55194226-55194245 | None:intergenic | 50.0% | |
CATCGACCAACCAGGTAGAA+GGG | + | chr5.2:55194827-55194846 | None:intergenic | 50.0% | |
CTCAATTCTCACCATCAGGC+AGG | + | chr5.2:55195965-55195984 | None:intergenic | 50.0% | |
CTGGGCTGCAAAAACCCAAA+TGG | - | chr5.2:55193230-55193249 | MS.gene010144:intron | 50.0% | |
CTGTATTATCTGTAGGGGGG+GGG | - | chr5.2:55193008-55193027 | MS.gene010144:intron | 50.0% | |
CTTCCCTGGATCACATTGTC+TGG | + | chr5.2:55193894-55193913 | None:intergenic | 50.0% | |
GAGGGGATATACACGTGAGA+GGG | - | chr5.2:55193114-55193133 | MS.gene010144:intron | 50.0% | |
GCAAGTTAGTTAGAGAGCGG+AGG | - | chr5.2:55193095-55193114 | MS.gene010144:intron | 50.0% | |
GCCATTGAAGACACTCAGGT+TGG | + | chr5.2:55194259-55194278 | None:intergenic | 50.0% | |
GCTGTATTATCTGTAGGGGG+GGG | - | chr5.2:55193007-55193026 | MS.gene010144:intron | 50.0% | |
GGTCACAACCGATGAGTACA+AGG | + | chr5.2:55193873-55193892 | None:intergenic | 50.0% | |
GTGACCAGACAATGTGATCC+AGG | - | chr5.2:55193887-55193906 | MS.gene010144:intron | 50.0% | |
TAGTTAGTGAGGCGTGGTAC+TGG | - | chr5.2:55196637-55196656 | MS.gene010144:intron | 50.0% | |
TGTATTATCTGTAGGGGGGG+GGG | - | chr5.2:55193009-55193028 | MS.gene010144:intron | 50.0% | |
TGTGGAAATGTCCTGCCTGA+TGG | - | chr5.2:55195951-55195970 | MS.gene010144:intron | 50.0% | |
TTGGAGAGGAAATGGTGAGC+TGG | - | chr5.2:55194418-55194437 | MS.gene010144:intron | 50.0% | |
TTTGCGTGCTGTGATCACTG+AGG | - | chr5.2:55193312-55193331 | MS.gene010144:intron | 50.0% | |
! | CACGTGAGAGGGAGTATAAG+AGG | - | chr5.2:55193125-55193144 | MS.gene010144:intron | 50.0% |
! | CATACCTCATCTGGAGTGAC+TGG | + | chr5.2:55196128-55196147 | None:intergenic | 50.0% |
! | CTCATGGTGCTGAAACACAC+TGG | - | chr5.2:55193370-55193389 | MS.gene010144:CDS | 50.0% |
! | CTCTGAGGAGCTTATGCTCT+GGG | - | chr5.2:55193212-55193231 | MS.gene010144:intron | 50.0% |
! | GCTGGTTTCTTACGCACAAG+TGG | - | chr5.2:55193775-55193794 | MS.gene010144:intron | 50.0% |
! | TCTCTGAGGAGCTTATGCTC+TGG | - | chr5.2:55193211-55193230 | MS.gene010144:intron | 50.0% |
! | TGATCTGCAGCTTTGGTGGT+TGG | + | chr5.2:55196098-55196117 | None:intergenic | 50.0% |
!! | GATCTTTGGGAGCATCAGGA+AGG | + | chr5.2:55197428-55197447 | None:intergenic | 50.0% |
!! | TTGACTGGCTTTGCAGCAAG+TGG | - | chr5.2:55196891-55196910 | MS.gene010144:intron | 50.0% |
ATGATCAGTGATGCTGGGCC+TGG | - | chr5.2:55196461-55196480 | MS.gene010144:intron | 55.0% | |
CAAAACTCTTGGGCGCGTGA+CGG | - | chr5.2:55193493-55193512 | MS.gene010144:intron | 55.0% | |
CAATATAAGGCCGTGGTCCG+AGG | + | chr5.2:55196917-55196936 | None:intergenic | 55.0% | |
CCATCGACCAACCAGGTAGA+AGG | + | chr5.2:55194828-55194847 | None:intergenic | 55.0% | |
CGTTCCAGTCACTCCAGATG+AGG | - | chr5.2:55196121-55196140 | MS.gene010144:intron | 55.0% | |
GAGGGGAAATACTCGCGAGA+GGG | - | chr5.2:55194459-55194478 | MS.gene010144:CDS | 55.0% | |
GAGGTGTGTAGGAGGGAAAG+AGG | - | chr5.2:55193144-55193163 | MS.gene010144:intron | 55.0% | |
GGAGGGGATATACACGTGAG+AGG | - | chr5.2:55193113-55193132 | MS.gene010144:intron | 55.0% | |
GTATTATCTGTAGGGGGGGG+GGG | - | chr5.2:55193010-55193029 | MS.gene010144:intron | 55.0% | |
TATTATCTGTAGGGGGGGGG+GGG | - | chr5.2:55193011-55193030 | MS.gene010144:intron | 55.0% | |
TTGGAGAGGAAGTGGTGAGC+TGG | - | chr5.2:55193073-55193092 | MS.gene010144:intron | 55.0% | |
! | CCTTCTACCTGGTTGGTCGA+TGG | - | chr5.2:55194825-55194844 | MS.gene010144:intron | 55.0% |
! | CTCGCGAGAGGGAGTATAAG+AGG | - | chr5.2:55194470-55194489 | MS.gene010144:CDS | 55.0% |
! | CTCGGACCACGGCCTTATAT+TGG | - | chr5.2:55196915-55196934 | MS.gene010144:intron | 55.0% |
! | GGTGCTGAAACACACTGGCT+CGG | - | chr5.2:55193375-55193394 | MS.gene010144:CDS | 55.0% |
! | GTCGTGATCTGCAGCTTTGG+TGG | + | chr5.2:55196102-55196121 | None:intergenic | 55.0% |
! | TGGCTTGGCGGTATGTCTAC+TGG | - | chr5.2:55197460-55197479 | MS.gene010144:CDS | 55.0% |
ATTATCTGTAGGGGGGGGGG+GGG | - | chr5.2:55193012-55193031 | MS.gene010144:intron | 60.0% | |
CTTGGGCGCGTGACGGTAAT+GGG | - | chr5.2:55193500-55193519 | MS.gene010144:intron | 60.0% | |
GCGGTATGTCTACTGGCCCT+TGG | - | chr5.2:55197467-55197486 | MS.gene010144:CDS | 60.0% | |
GGAGGGGAAATACTCGCGAG+AGG | - | chr5.2:55194458-55194477 | MS.gene010144:CDS | 60.0% | |
GGCTTTGCAGCAAGTGGCCT+CGG | - | chr5.2:55196897-55196916 | MS.gene010144:intron | 60.0% | |
TCTTGGGCGCGTGACGGTAA+TGG | - | chr5.2:55193499-55193518 | MS.gene010144:intron | 60.0% | |
!! | GAAACACACTGGCTCGGTGG+AGG | - | chr5.2:55193381-55193400 | MS.gene010144:CDS | 60.0% |
!! | GCTGAAACACACTGGCTCGG+TGG | - | chr5.2:55193378-55193397 | MS.gene010144:CDS | 60.0% |
CAGCAAGTGGCCTCGGACCA+CGG | - | chr5.2:55196904-55196923 | MS.gene010144:intron | 65.0% | |
TTATCTGTAGGGGGGGGGGG+GGG | - | chr5.2:55193013-55193032 | MS.gene010144:intron | 65.0% | |
TATCTGTAGGGGGGGGGGGG+GGG | - | chr5.2:55193014-55193033 | MS.gene010144:intron | 70.0% | |
ATCTGTAGGGGGGGGGGGGG+GGG | - | chr5.2:55193015-55193034 | MS.gene010144:intron | 75.0% | |
! | TCTGTAGGGGGGGGGGGGGG+GGG | - | chr5.2:55193016-55193035 | MS.gene010144:intron | 80.0% |
! | CTGTAGGGGGGGGGGGGGGG+GGG | - | chr5.2:55193017-55193036 | MS.gene010144:intron | 85.0% |
! | TGTAGGGGGGGGGGGGGGGG+GGG | - | chr5.2:55193018-55193037 | MS.gene010144:intron | 85.0% |
! | GTAGGGGGGGGGGGGGGGGG+GGG | - | chr5.2:55193019-55193038 | MS.gene010144:intron | 90.0% |
! | TAGGGGGGGGGGGGGGGGGG+GGG | - | chr5.2:55193020-55193039 | MS.gene010144:intron | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 55191892 | 55197584 | 55191892 | ID=MS.gene010144 |
chr5.2 | mRNA | 55191892 | 55197584 | 55191892 | ID=MS.gene010144.t1;Parent=MS.gene010144 |
chr5.2 | exon | 55197402 | 55197584 | 55197402 | ID=MS.gene010144.t1.exon1;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55197402 | 55197584 | 55197402 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55197125 | 55197226 | 55197125 | ID=MS.gene010144.t1.exon2;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55197125 | 55197226 | 55197125 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55194447 | 55194576 | 55194447 | ID=MS.gene010144.t1.exon3;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55194447 | 55194576 | 55194447 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55193504 | 55193596 | 55193504 | ID=MS.gene010144.t1.exon4;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55193504 | 55193596 | 55193504 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55193334 | 55193422 | 55193334 | ID=MS.gene010144.t1.exon5;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55193334 | 55193422 | 55193334 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55192659 | 55192739 | 55192659 | ID=MS.gene010144.t1.exon6;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55192659 | 55192739 | 55192659 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55192480 | 55192569 | 55192480 | ID=MS.gene010144.t1.exon7;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55192480 | 55192569 | 55192480 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55192289 | 55192378 | 55192289 | ID=MS.gene010144.t1.exon8;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55192289 | 55192378 | 55192289 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55192136 | 55192186 | 55192136 | ID=MS.gene010144.t1.exon9;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55192136 | 55192186 | 55192136 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
chr5.2 | exon | 55191892 | 55192053 | 55191892 | ID=MS.gene010144.t1.exon10;Parent=MS.gene010144.t1 |
chr5.2 | CDS | 55191892 | 55192053 | 55191892 | ID=cds.MS.gene010144.t1;Parent=MS.gene010144.t1 |
Gene Sequence |
Protein sequence |