AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011504

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011504.t1 MTR_4g101650 98.305 590 10 0 1 590 1 590 0.0 1200
MS.gene011504.t1 MTR_3g008580 66.954 581 192 0 6 586 8 588 0.0 815
MS.gene011504.t1 MTR_7g051440 66.960 569 182 4 24 589 26 591 0.0 774
MS.gene011504.t1 MTR_3g115050 52.514 537 234 7 16 551 19 535 0.0 552
MS.gene011504.t1 MTR_4g049390 51.776 535 237 6 18 551 18 532 0.0 545
MS.gene011504.t1 MTR_1g026410 51.273 550 244 7 6 551 5 534 0.0 536
MS.gene011504.t1 MTR_4g048350 51.402 535 238 7 18 551 18 531 0.0 535
MS.gene011504.t1 MTR_8g479380 48.746 558 257 9 4 557 7 539 0.0 525
MS.gene011504.t1 MTR_2g088080 51.963 535 236 6 18 551 21 535 0.0 523
MS.gene011504.t1 MTR_5g018270 50.749 534 240 7 18 551 22 532 2.40e-179 518
MS.gene011504.t1 MTR_4g075690 49.171 543 251 8 10 551 16 534 1.62e-178 516
MS.gene011504.t1 MTR_8g479390 49.064 534 244 8 22 551 26 535 5.66e-177 512
MS.gene011504.t1 MTR_4g132320 48.168 546 261 7 8 551 11 536 6.74e-172 499
MS.gene011504.t1 MTR_1g090707 47.619 546 271 9 10 553 8 540 6.89e-171 498
MS.gene011504.t1 MTR_4g083190 46.996 566 280 8 1 562 1 550 3.64e-170 495
MS.gene011504.t1 MTR_4g083210 45.091 550 278 7 13 558 11 540 1.46e-160 470
MS.gene011504.t1 MTR_2g088080 51.688 474 208 6 79 551 1 454 3.04e-160 466
MS.gene011504.t1 MTR_3g083450 45.588 544 270 7 22 558 21 545 6.98e-158 463
MS.gene011504.t1 MTR_3g083440 44.982 558 275 10 13 558 7 544 9.52e-157 461
MS.gene011504.t1 MTR_3g083390 44.524 557 279 8 13 558 7 544 2.64e-156 459
MS.gene011504.t1 MTR_3g083400 44.803 558 276 10 13 558 7 544 2.54e-155 457
MS.gene011504.t1 MTR_3g083430 44.345 557 280 8 13 558 7 544 5.14e-155 456
MS.gene011504.t1 MTR_3g083410 44.701 519 259 9 48 558 10 508 2.29e-144 427
MS.gene011504.t1 MTR_4g075690 49.123 456 207 8 10 464 16 447 1.11e-143 423
MS.gene011504.t1 MTR_5g020600 29.474 570 356 18 9 549 14 566 3.33e-62 215
MS.gene011504.t1 MTR_5g020620 29.534 579 360 19 1 549 1 561 2.93e-60 210
MS.gene011504.t1 MTR_3g078740 28.930 598 350 21 8 550 8 585 2.45e-57 202
MS.gene011504.t1 MTR_7g062250 29.101 567 332 19 29 549 36 578 1.79e-54 194
MS.gene011504.t1 MTR_7g060460 28.670 579 367 18 6 549 14 581 2.77e-53 191
MS.gene011504.t1 MTR_8g027375 28.599 521 335 14 29 522 36 546 1.75e-52 189
MS.gene011504.t1 MTR_7g058690 27.931 580 369 20 6 549 14 580 2.62e-52 189
MS.gene011504.t1 MTR_5g069680 28.371 571 361 19 7 549 8 558 1.04e-51 186
MS.gene011504.t1 MTR_4g064530 27.788 547 334 13 8 514 25 550 1.13e-51 187
MS.gene011504.t1 MTR_7g458880 27.336 578 375 18 6 549 14 580 5.11e-50 182
MS.gene011504.t1 MTR_4g015120 26.703 543 365 15 29 549 26 557 6.68e-50 181
MS.gene011504.t1 MTR_4g064530 27.778 540 329 13 8 507 25 543 9.37e-50 181
MS.gene011504.t1 MTR_3g462760 28.159 554 351 20 24 549 22 556 4.63e-49 179
MS.gene011504.t1 MTR_8g091390 29.371 572 341 19 17 551 24 569 1.30e-48 178
MS.gene011504.t1 MTR_3g078700 26.724 580 340 21 6 550 7 536 2.13e-47 174
MS.gene011504.t1 MTR_5g073210 27.417 569 371 17 10 549 5 560 2.08e-46 172
MS.gene011504.t1 MTR_4g133150 43.172 227 91 7 131 355 21 211 5.99e-45 159
MS.gene011504.t1 MTR_5g081810 27.068 532 342 19 45 549 17 529 7.26e-44 164
MS.gene011504.t1 MTR_7g065970 28.223 574 340 19 6 531 3 552 9.14e-44 164
MS.gene011504.t1 MTR_5g083360 28.166 529 335 16 14 509 11 527 2.53e-43 163
MS.gene011504.t1 MTR_7g062310 26.763 553 365 17 29 549 49 593 1.08e-42 162
MS.gene011504.t1 MTR_3g078730 27.419 558 320 20 29 550 27 535 1.12e-42 161
MS.gene011504.t1 MTR_2g008330 25.739 575 384 17 6 549 17 579 6.87e-42 159
MS.gene011504.t1 MTR_3g071890 27.941 544 349 17 9 522 13 543 1.17e-41 159
MS.gene011504.t1 MTR_4g019225 26.476 559 363 12 27 549 26 572 3.04e-41 157
MS.gene011504.t1 MTR_7g065980 28.796 573 358 20 15 549 11 571 3.76e-41 157
MS.gene011504.t1 MTR_3g101635 27.306 553 363 16 13 538 15 555 6.21e-41 156
MS.gene011504.t1 MTR_3g101640 27.032 566 368 14 6 538 7 560 7.44e-40 154
MS.gene011504.t1 MTR_5g018290 52.459 61 29 0 491 551 5 65 2.08e-15 71.6
MS.gene011504.t1 MTR_4g133160 31.429 105 58 2 431 535 1 91 2.99e-13 66.2
MS.gene011504.t1 MTR_5g081790 26.543 162 107 4 15 165 9 169 2.26e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011504.t1 AT4G12420 79.181 562 116 1 6 566 3 564 0.0 945
MS.gene011504.t1 AT4G12420 79.181 562 116 1 6 566 3 564 0.0 945
MS.gene011504.t1 AT5G51480 65.165 577 198 3 15 589 16 591 0.0 795
MS.gene011504.t1 AT4G25240 66.018 565 191 1 3 567 5 568 0.0 778
MS.gene011504.t1 AT4G25240 66.018 565 191 1 3 567 5 568 0.0 778
MS.gene011504.t1 AT5G48450 62.410 556 198 4 5 559 7 552 0.0 720
MS.gene011504.t1 AT5G48450 62.410 556 198 4 5 559 7 552 0.0 720
MS.gene011504.t1 AT1G76160 49.281 556 253 8 1 551 1 532 0.0 531
MS.gene011504.t1 AT1G21850 49.081 544 254 6 9 551 11 532 0.0 524
MS.gene011504.t1 AT1G41830 48.816 549 256 7 6 553 11 535 1.94e-180 521
MS.gene011504.t1 AT4G22010 49.818 548 250 8 11 553 7 534 6.07e-180 520
MS.gene011504.t1 AT1G21860 48.346 544 258 6 9 551 11 532 1.15e-179 519
MS.gene011504.t1 AT4G38420 49.540 543 247 9 16 551 19 541 1.74e-174 506
MS.gene011504.t1 AT1G55570 47.417 542 264 7 17 553 19 544 1.95e-173 503
MS.gene011504.t1 AT3G13390 48.059 541 260 7 23 558 24 548 2.79e-171 498
MS.gene011504.t1 AT4G28090 48.889 540 251 10 16 551 18 536 5.69e-168 489
MS.gene011504.t1 AT5G66920 46.629 534 256 8 22 551 32 540 1.61e-167 488
MS.gene011504.t1 AT4G37160 48.820 551 254 10 8 553 11 538 2.80e-167 487
MS.gene011504.t1 AT1G55560 45.714 560 278 9 6 558 5 545 1.40e-166 486
MS.gene011504.t1 AT3G13400 45.648 563 284 9 1 558 1 546 3.81e-166 484
MS.gene011504.t1 AT3G13400 45.648 563 284 9 1 558 1 546 3.81e-166 484
MS.gene011504.t1 AT1G75790 45.073 548 273 10 16 553 16 545 1.38e-159 468
MS.gene011504.t1 AT2G23630 47.940 534 256 7 22 554 30 542 1.95e-158 465
MS.gene011504.t1 AT2G23630 47.940 534 256 7 22 554 25 537 2.39e-158 464
MS.gene011504.t1 AT4G38420 48.861 483 220 9 16 491 19 481 1.50e-148 438
MS.gene011504.t1 AT4G38420 48.904 456 206 9 16 464 19 454 3.32e-138 410
MS.gene011504.t1 AT4G37160 49.134 462 207 10 8 464 11 449 5.44e-138 409
MS.gene011504.t1 AT5G21105 28.916 581 351 19 8 550 20 576 5.42e-58 204
MS.gene011504.t1 AT5G21100 28.322 572 346 18 18 550 15 561 1.71e-55 197
MS.gene011504.t1 AT5G21105 28.810 538 326 17 8 507 20 538 4.52e-54 192
MS.gene011504.t1 AT4G39830 27.087 587 371 17 6 553 13 581 1.33e-53 192
MS.gene011504.t1 AT2G30210 28.229 542 348 16 6 518 9 538 1.30e-51 186
MS.gene011504.t1 AT1G18140 28.998 569 338 21 29 549 31 581 9.07e-51 184
MS.gene011504.t1 AT5G58910 27.257 576 367 19 6 549 12 567 5.36e-50 182
MS.gene011504.t1 AT2G46570 28.442 552 348 17 29 549 34 569 3.97e-49 179
MS.gene011504.t1 AT5G60020 27.857 560 356 16 29 549 27 577 9.23e-49 179
MS.gene011504.t1 AT5G58910 27.431 576 365 20 6 549 12 566 1.10e-48 178
MS.gene011504.t1 AT5G48100 26.394 538 362 10 1 514 1 528 1.48e-48 178
MS.gene011504.t1 AT5G09360 29.049 568 354 20 6 544 18 565 4.10e-48 177
MS.gene011504.t1 AT5G60020 28.125 544 343 16 45 549 11 545 9.16e-48 175
MS.gene011504.t1 AT2G29130 26.950 564 347 16 29 549 32 573 1.24e-47 176
MS.gene011504.t1 AT5G03260 26.795 571 373 16 6 549 5 557 5.97e-46 171
MS.gene011504.t1 AT5G60020 27.938 519 330 14 29 510 27 538 1.75e-45 169
MS.gene011504.t1 AT2G38080 25.342 584 375 18 1 549 1 558 2.60e-45 169
MS.gene011504.t1 AT5G01190 26.667 570 375 18 9 549 3 558 4.51e-45 168
MS.gene011504.t1 AT5G05390 26.945 527 344 15 13 509 10 525 5.79e-45 168
MS.gene011504.t1 AT3G09220 26.908 524 347 14 14 509 12 527 9.02e-43 162
MS.gene011504.t1 AT5G07130 27.133 586 362 19 8 558 7 562 9.26e-43 162
MS.gene011504.t1 AT5G01190 26.894 528 347 17 47 549 31 544 1.10e-42 161
MS.gene011504.t1 AT5G58910 27.002 537 336 19 45 549 11 523 1.58e-42 160
MS.gene011504.t1 AT5G01040 28.157 586 360 20 6 551 4 568 2.50e-42 161
MS.gene011504.t1 AT5G01050 27.598 587 347 19 13 551 14 570 4.33e-42 160
MS.gene011504.t1 AT2G40370 25.801 562 359 17 6 522 7 555 3.09e-38 149
MS.gene011504.t1 AT4G39830 26.358 497 312 15 93 553 6 484 4.08e-38 147
MS.gene011504.t1 AT4G39830 26.358 497 312 15 93 553 8 486 4.33e-38 147
MS.gene011504.t1 AT2G46570 28.024 496 310 17 85 549 5 484 3.15e-36 142
MS.gene011504.t1 AT4G39830 25.553 497 303 14 93 553 8 473 1.03e-33 134
MS.gene011504.t1 AT5G21105 27.919 394 229 13 191 550 13 385 4.96e-32 128
MS.gene011504.t1 AT3G09220 25.688 436 290 12 100 509 3 430 1.35e-27 116
MS.gene011504.t1 AT5G07130 26.389 504 308 18 90 558 2 477 2.48e-27 116
MS.gene011504.t1 AT5G07130 26.389 504 308 18 90 558 2 477 2.48e-27 116

Find 136 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAAGTCTGCCACATTTA+AGG 0.121560 8.2:+21758210 None:intergenic
TGGAAGCTTTAGAGGATTTA+TGG 0.153986 8.2:-21759432 MS.gene011504:CDS
TATCAACAAGTCTGAATTTC+AGG 0.211179 8.2:-21760278 MS.gene011504:CDS
CTGAAAGATCCTTGTGGATT+TGG 0.240958 8.2:+21759674 None:intergenic
CAAAGAGCAGCTGGTGGATT+TGG 0.248226 8.2:-21761237 MS.gene011504:CDS
TGTTCAAAATCGATGTTATC+AGG 0.265298 8.2:+21760906 None:intergenic
TGCTGACCATTACAAATTAA+AGG 0.265825 8.2:-21759525 MS.gene011504:CDS
TGGTAAGTCCAGTTCCATTT+TGG 0.301426 8.2:+21761315 None:intergenic
TGGAGCATGGACAGCAGTTT+TGG 0.302215 8.2:-21758369 MS.gene011504:CDS
CCACAAGGATCTTTCAGATA+TGG 0.317042 8.2:-21759668 MS.gene011504:CDS
GTAATCAATGGAAGCTTTAG+AGG 0.317693 8.2:-21759440 MS.gene011504:CDS
AGAGTGTCATTATATCTATA+AGG 0.320574 8.2:+21760933 None:intergenic
TACATCACTGCTTCTCCTCT+TGG 0.321669 8.2:-21761985 MS.gene011504:CDS
GTATGAAACCTCAAAATCAT+AGG 0.321799 8.2:+21762005 None:intergenic
TCATGGCAAGATGGTGTTCT+TGG 0.331310 8.2:-21761357 MS.gene011504:CDS
TCACGTTGGCAACGAGTTAC+TGG 0.341690 8.2:-21760084 MS.gene011504:CDS
CCCTCGACAATGTTGGAGTT+TGG 0.344346 8.2:-21758343 MS.gene011504:CDS
ACCCGAGGAGGTCCGGTTAG+AGG 0.356788 8.2:+21759473 None:intergenic
CACAGCAACATTGTTGTTTG+TGG 0.367710 8.2:+21761688 None:intergenic
CTGAAGTCTGCCACATTTAA+GGG 0.371433 8.2:+21758211 None:intergenic
CCGTCTGTTTAGGTTTATCC+TGG 0.379057 8.2:-21758389 MS.gene011504:intron
AACCTTGATTCATGGTATCT+TGG 0.379868 8.2:-21758305 MS.gene011504:CDS
GAACAGAAAACCTTGATTCA+TGG 0.383673 8.2:-21758313 MS.gene011504:CDS
CTAGATGATGGAAAAGATCT+TGG 0.385324 8.2:-21760990 MS.gene011504:CDS
ATTGTCCTATTCCACCAAAA+TGG 0.389757 8.2:-21761329 MS.gene011504:CDS
CCAATCCTGCCACTCCAATC+AGG 0.392379 8.2:-21759550 MS.gene011504:CDS
GCTGACCATTACAAATTAAA+GGG 0.394425 8.2:-21759524 MS.gene011504:CDS
TCCTCTTGGAGTACCCCAAC+AGG 0.398295 8.2:-21761971 MS.gene011504:intron
GTAAATCTCTGTCACGTTGA+TGG 0.410681 8.2:+21759643 None:intergenic
GCCTCTAACCGGACCTCCTC+GGG 0.410839 8.2:-21759474 MS.gene011504:CDS
TCTGATCCTTCACTTGAAAC+TGG 0.411595 8.2:+21761295 None:intergenic
CTGCTTCAATCAACGGGAAT+GGG 0.420025 8.2:-21758065 MS.gene011504:CDS
CCAGATGGTGTTCTCATCAA+TGG 0.420137 8.2:-21760963 MS.gene011504:CDS
TAATGGTCAGCAAGCCTGAT+TGG 0.424218 8.2:+21759536 None:intergenic
GCTATCAACAAACAGTTTCC+AGG 0.425051 8.2:-21761728 MS.gene011504:CDS
TGTGAATGTCCACAACAAAT+TGG 0.425756 8.2:-21761669 MS.gene011504:CDS
ATGAAAACCTCCTCATTCAT+TGG 0.431957 8.2:-21761646 MS.gene011504:intron
CTATTCCACCAAAATGGAAC+TGG 0.434841 8.2:-21761323 MS.gene011504:CDS
ATACTCCCTTTAATTTGTAA+TGG 0.435490 8.2:+21759519 None:intergenic
TTCAGCAAAGGAGGAGTTCA+TGG 0.435896 8.2:-21761374 MS.gene011504:CDS
TTTCATCTGCTTCAATCAAC+GGG 0.436558 8.2:-21758071 MS.gene011504:CDS
CCACATTTAAGGGCATTGTC+TGG 0.445078 8.2:+21758221 None:intergenic
TGAACCAAGCAAGATCTATC+AGG 0.449999 8.2:-21759969 MS.gene011504:intron
CCTGATTGGAGTGGCAGGAT+TGG 0.450544 8.2:+21759550 None:intergenic
GCAGGATGGACTTCGGAGAT+TGG 0.461973 8.2:-21759252 MS.gene011504:intron
GAGTGTCATTATATCTATAA+GGG 0.466183 8.2:+21760934 None:intergenic
AAAACAACAATGTCCCCTTC+CGG 0.467709 8.2:+21761165 None:intergenic
TTGGTCAAGAAACATACATC+AGG 0.467887 8.2:-21758286 MS.gene011504:CDS
ATGCATACTTATCACTTGAA+TGG 0.471335 8.2:-21759380 MS.gene011504:CDS
TTTCCCACGAAGCCTCTAAC+CGG 0.473650 8.2:-21759485 MS.gene011504:CDS
ACTACATTGTCGCAAGTGCC+AGG 0.473662 8.2:-21760119 MS.gene011504:CDS
ATTTCATCTGCTTCAATCAA+CGG 0.473734 8.2:-21758072 MS.gene011504:CDS
ATGACCTCTTGCTTTCCCCT+TGG 0.475068 8.2:+21760035 None:intergenic
GAGATTGGTCTGAGAATAGC+AGG 0.476348 8.2:-21759237 MS.gene011504:CDS
AGAGCAGCTGGTGGATTTGG+TGG 0.476861 8.2:-21761234 MS.gene011504:CDS
AAGCGGAGAGCAACACTTAG+TGG 0.478625 8.2:-21759584 MS.gene011504:CDS
TGTTTCTACCCGAGGAGGTC+CGG 0.488278 8.2:+21759466 None:intergenic
GAGACCTGATAGATCTTGCT+TGG 0.490869 8.2:+21759965 None:intergenic
CGACTTCGTGTACATAATGT+TGG 0.490869 8.2:-21760303 MS.gene011504:CDS
GACCAAGATACCATGAATCA+AGG 0.492744 8.2:+21758303 None:intergenic
ATTAATGTAGGCTTTGAGAA+AGG 0.494130 8.2:-21761015 MS.gene011504:intron
TTGAGAAAGGCTCTAGATGA+TGG 0.494379 8.2:-21761002 MS.gene011504:CDS
TCTGCTTCAATCAACGGGAA+TGG 0.495180 8.2:-21758066 MS.gene011504:CDS
CAGATGGTGTTCTCATCAAT+GGG 0.495277 8.2:-21760962 MS.gene011504:CDS
AAAACTGCTGTCCATGCTCC+AGG 0.500206 8.2:+21758371 None:intergenic
AGCCTCTAACCGGACCTCCT+CGG 0.505850 8.2:-21759475 MS.gene011504:CDS
GCAAGCCTGATTGGAGTGGC+AGG 0.508141 8.2:+21759545 None:intergenic
CTTGCACTATTCAAATTCCA+AGG 0.508314 8.2:-21760052 MS.gene011504:CDS
GTAGAAACATCAGTAATCAA+TGG 0.512552 8.2:-21759452 MS.gene011504:CDS
TCCCCTTCCGGAGTATCAAA+AGG 0.513829 8.2:+21761177 None:intergenic
CCATTGATGAGAACACCATC+TGG 0.514712 8.2:+21760963 None:intergenic
TTTCAAGTGAAGGATCAGAT+TGG 0.514777 8.2:-21761291 MS.gene011504:CDS
TTTAGGTTTATCCTGGAGCA+TGG 0.523365 8.2:-21758382 MS.gene011504:intron
TTTGTGGTTACATTAATAGT+AGG 0.524783 8.2:+21761704 None:intergenic
GCTGAAGTTGTTATTCACTT+TGG 0.525996 8.2:-21758043 MS.gene011504:CDS
TGAACTTGCATTCTGATCCA+TGG 0.528156 8.2:+21760146 None:intergenic
TTGCACTATTCAAATTCCAA+GGG 0.541633 8.2:-21760051 MS.gene011504:CDS
TCTCTGCTAGAAGTAAGTTA+TGG 0.541722 8.2:+21760247 None:intergenic
GAACAAATTGATGTCAAACC+AGG 0.544999 8.2:-21760888 MS.gene011504:intron
TTGGTCTCCCTCGACAATGT+TGG 0.545883 8.2:-21758350 MS.gene011504:CDS
AAACCACCAGTGAAAATCGA+TGG 0.548420 8.2:-21759608 MS.gene011504:CDS
ATACATCAGGGTTGTCAACC+CGG 0.551620 8.2:-21758273 MS.gene011504:CDS
TTGATGAGAAAGAAGAAGAG+AGG 0.551843 8.2:+21762075 None:intergenic
TGGCAACGAGTTACTGGAGT+TGG 0.551919 8.2:-21760078 MS.gene011504:CDS
GCTCTTTGAAAATTAAGTGA+AGG 0.552773 8.2:+21761252 None:intergenic
CAGTGAAAATCGATGGGAAG+CGG 0.553222 8.2:-21759601 MS.gene011504:CDS
ATCAAAAGGAACAGAAATGA+CGG 0.554519 8.2:+21761191 None:intergenic
TATGAAACCTCAAAATCATA+GGG 0.554546 8.2:+21762006 None:intergenic
AGCAAGAGGTCATTTACCAC+CGG 0.555237 8.2:-21760025 MS.gene011504:CDS
ACTAGCTTAGATATTCATGT+TGG 0.562613 8.2:-21760192 MS.gene011504:CDS
CAAGTGATAAGTATGCATCT+TGG 0.565246 8.2:+21759385 None:intergenic
TTAAGGGCATTGTCTGGCAT+CGG 0.569023 8.2:+21758227 None:intergenic
ATTGACTGCAGGATGGACTT+CGG 0.572724 8.2:-21759259 MS.gene011504:intron
AGGAGGAGTTCATGGCAAGA+TGG 0.573398 8.2:-21761366 MS.gene011504:CDS
GACTTACCAGTTTCAAGTGA+AGG 0.574483 8.2:-21761301 MS.gene011504:CDS
AACCACCAGTGAAAATCGAT+GGG 0.582588 8.2:-21759607 MS.gene011504:CDS
CAGCTGAAGAGAGTGTAAGA+AGG 0.584437 8.2:+21762043 None:intergenic
AAACAACCTACCAATGAATG+AGG 0.588957 8.2:+21761636 None:intergenic
ACGTGATTCATTCACAAACC+TGG 0.590454 8.2:+21760101 None:intergenic
GGTGTTCTCATCAATGGGAA+AGG 0.593689 8.2:-21760957 MS.gene011504:CDS
CCAGACAATGCCCTTAAATG+TGG 0.594808 8.2:-21758221 MS.gene011504:CDS
ATTACTGATGTTTCTACCCG+AGG 0.595120 8.2:+21759458 None:intergenic
GCAGGGGTACATATAACAAG+TGG 0.596349 8.2:-21759219 MS.gene011504:CDS
GGTACATATAACAAGTGGGA+TGG 0.596737 8.2:-21759214 MS.gene011504:CDS
TCAAATTGATCATCTGGACC+CGG 0.598046 8.2:+21760006 None:intergenic
TGGTGGTTGAAATAGGTCTG+GGG 0.600438 8.2:-21761397 MS.gene011504:intron
TCAAAAGGAACAGAAATGAC+GGG 0.601945 8.2:+21761192 None:intergenic
AGGTCCGGTTAGAGGCTTCG+TGG 0.602265 8.2:+21759481 None:intergenic
TTGGTACACACGCAATCACA+CGG 0.603449 8.2:-21761133 MS.gene011504:intron
GGTCCGGTTAGAGGCTTCGT+GGG 0.612012 8.2:+21759482 None:intergenic
ATAGGTCTGGGGTTCAGCAA+AGG 0.613231 8.2:-21761386 MS.gene011504:intron
AATAGCTCGTACTACAGCGC+AGG 0.617032 8.2:-21759191 MS.gene011504:intron
ACCTGTTGGGGTACTCCAAG+AGG 0.618129 8.2:+21761970 None:intergenic
TCCAAACTCCAACATTGTCG+AGG 0.619426 8.2:+21758342 None:intergenic
GGTCTGGGGTTCAGCAAAGG+AGG 0.623918 8.2:-21761383 MS.gene011504:CDS
AATTCCAAGGGGAAAGCAAG+AGG 0.626773 8.2:-21760039 MS.gene011504:CDS
GTCAGCAAGCCTGATTGGAG+TGG 0.632584 8.2:+21759541 None:intergenic
GCAAGAGGTCATTTACCACC+GGG 0.637101 8.2:-21760024 MS.gene011504:CDS
CCAAACTCCAACATTGTCGA+GGG 0.637486 8.2:+21758343 None:intergenic
TTACTTCTAGCAGAGACTGA+AGG 0.644138 8.2:-21760240 MS.gene011504:CDS
AAGGAACAGAAATGACGGGT+CGG 0.646239 8.2:+21761196 None:intergenic
TGCACTATTCAAATTCCAAG+GGG 0.648906 8.2:-21760050 MS.gene011504:CDS
CAGGGGTACATATAACAAGT+GGG 0.653422 8.2:-21759218 MS.gene011504:CDS
TGGTCAAGAAACATACATCA+GGG 0.655143 8.2:-21758285 MS.gene011504:CDS
CCATATCTGAAAGATCCTTG+TGG 0.657664 8.2:+21759668 None:intergenic
AAAGATCTTGGAATGCCAGA+TGG 0.662306 8.2:-21760978 MS.gene011504:CDS
CAACCTACCAATGAATGAGG+AGG 0.666485 8.2:+21761639 None:intergenic
AGATGGAACGTATCAGCAAG+TGG 0.669963 8.2:-21759704 MS.gene011504:CDS
GTTACATTAATAGTAGGACC+TGG 0.670641 8.2:+21761710 None:intergenic
CAACATTATGTACACGAAGT+CGG 0.670671 8.2:+21760304 None:intergenic
AGATTGGTCTGAGAATAGCA+GGG 0.671526 8.2:-21759236 MS.gene011504:CDS
ACTGATGTTTCTACCCGAGG+AGG 0.675653 8.2:+21759461 None:intergenic
GGTTTGTGAATGAATCACGT+TGG 0.686085 8.2:-21760098 MS.gene011504:CDS
GATTGGTCTGAGAATAGCAG+GGG 0.702170 8.2:-21759235 MS.gene011504:CDS
AATTGATCATCTGGACCCGG+TGG 0.707631 8.2:+21760009 None:intergenic
GGTGCTCGTCCAAATCCACA+AGG 0.734148 8.2:-21759683 MS.gene011504:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTTTTAAAAAATTGA+GGG - chr8.2:21761114-21761133 MS.gene011504:intron 10.0%
!! AATATATAATTCTATAGAAC+TGG + chr8.2:21760161-21760180 None:intergenic 15.0%
!!! AAGTTTATTTTTTTTATTGG+TGG - chr8.2:21758678-21758697 MS.gene011504:intron 15.0%
!!! AAGTTTTTTGAAATTAATGT+AGG - chr8.2:21759065-21759084 MS.gene011504:intron 15.0%
!!! GTTTTGTTTTTAAAAAATTG+AGG - chr8.2:21761113-21761132 MS.gene011504:intron 15.0%
!!! TTTCTTTGTTAATTTTTAAC+AGG - chr8.2:21759756-21759775 MS.gene011504:intron 15.0%
!! ACATATTTAATATGTCAACA+CGG + chr8.2:21760273-21760292 None:intergenic 20.0%
!! GTTATAGTTAAACTTGAAAA+GGG - chr8.2:21758259-21758278 MS.gene011504:CDS 20.0%
!! GTTATATAGAAAAGATGTAA+AGG - chr8.2:21758301-21758320 MS.gene011504:CDS 20.0%
!! GTTTAAAAAGTTGAAAACTT+TGG - chr8.2:21758637-21758656 MS.gene011504:intron 20.0%
!! TGGTTTATGAAAAAAAAAGA+AGG + chr8.2:21761026-21761045 None:intergenic 20.0%
!! TGTTATAGTTAAACTTGAAA+AGG - chr8.2:21758258-21758277 MS.gene011504:CDS 20.0%
!! TTACTGAAAAATGTTCATTA+TGG + chr8.2:21762090-21762109 None:intergenic 20.0%
!! TTGAATAATAAGGGTAAATA+TGG + chr8.2:21761428-21761447 None:intergenic 20.0%
!!! ATGTTTTTCATTGTTTATGT+AGG - chr8.2:21758336-21758355 MS.gene011504:CDS 20.0%
!!! GCTTTTAGTAAATTAAGATT+AGG - chr8.2:21759511-21759530 MS.gene011504:CDS 20.0%
!!! TAATGAACATTTTTCAGTAA+AGG - chr8.2:21762090-21762109 MS.gene011504:CDS 20.0%
!!! TATCAACTTTAGAATTCATT+AGG - chr8.2:21760241-21760260 MS.gene011504:CDS 20.0%
!!! TTACTTTTCAAATACTGATA+TGG - chr8.2:21759279-21759298 MS.gene011504:intron 20.0%
!!! TTGTTTTTCAAATACTGATA+TGG - chr8.2:21759341-21759360 MS.gene011504:intron 20.0%
! AAACATTAGAAACATTTGAC+AGG + chr8.2:21759739-21759758 None:intergenic 25.0%
! AAAGTCAATGATGAAAATCA+AGG + chr8.2:21761092-21761111 None:intergenic 25.0%
! AATTATATAGTCTGCATTAG+TGG + chr8.2:21760323-21760342 None:intergenic 25.0%
! ATGTAGTAAACCAAATAGTA+AGG + chr8.2:21761604-21761623 None:intergenic 25.0%
! TAACTATTATGTATGAAGCA+TGG - chr8.2:21758524-21758543 MS.gene011504:intron 25.0%
! TAGTTGTGTATAAAACTTGT+AGG + chr8.2:21761670-21761689 None:intergenic 25.0%
! TATGAAACCTCAAAATCATA+GGG + chr8.2:21758089-21758108 None:intergenic 25.0%
! TTTGTGGTTACATTAATAGT+AGG + chr8.2:21758391-21758410 None:intergenic 25.0%
!! AGAGTGTCATTATATCTATA+AGG + chr8.2:21759162-21759181 None:intergenic 25.0%
!! CTTCTTTCTCTTACTATTTT+TGG - chr8.2:21758149-21758168 MS.gene011504:intron 25.0%
!! GAGTGTCATTATATCTATAA+GGG + chr8.2:21759161-21759180 None:intergenic 25.0%
!!! AGCTAAAAGCTCTTTTTTTT+GGG + chr8.2:21761234-21761253 None:intergenic 25.0%
!!! AGCTTTTGCTTTGAATAATA+AGG + chr8.2:21761438-21761457 None:intergenic 25.0%
!!! ATACTCCCTTTAATTTGTAA+TGG + chr8.2:21760576-21760595 None:intergenic 25.0%
!!! CTCTTACTATTTTTGGAAAT+GGG - chr8.2:21758156-21758175 MS.gene011504:intron 25.0%
!!! GATATGCATTTTTTGTTGTA+GGG - chr8.2:21760734-21760753 MS.gene011504:intron 25.0%
!!! GCAGATGAAATAATTTTTTG+AGG + chr8.2:21762011-21762030 None:intergenic 25.0%
!!! GCTTTTGCTTTGAATAATAA+GGG + chr8.2:21761437-21761456 None:intergenic 25.0%
!!! TCTCTTACTATTTTTGGAAA+TGG - chr8.2:21758155-21758174 MS.gene011504:intron 25.0%
!!! TGATATGGATGTTTTTTGTT+TGG - chr8.2:21759294-21759313 MS.gene011504:intron 25.0%
!!! TTTTTATTGGTGGTTGAAAT+AGG - chr8.2:21758688-21758707 MS.gene011504:intron 25.0%
AGAAAGAAGAAAAACCTGTT+GGG + chr8.2:21758138-21758157 None:intergenic 30.0%
ATCAAAAGGAACAGAAATGA+CGG + chr8.2:21758904-21758923 None:intergenic 30.0%
ATGCATACTTATCACTTGAA+TGG - chr8.2:21760712-21760731 MS.gene011504:intron 30.0%
ATTAAGATTAGGCACTCAAA+AGG - chr8.2:21759522-21759541 MS.gene011504:CDS 30.0%
ATTTCATCTGCTTCAATCAA+CGG - chr8.2:21762020-21762039 MS.gene011504:CDS 30.0%
CAGTTGGTCAAAAGAATTTA+TGG - chr8.2:21761158-21761177 MS.gene011504:CDS 30.0%
CTACTAACAGATATTAGTCA+AGG + chr8.2:21759631-21759650 None:intergenic 30.0%
CTCTTGTATACAATTTCTCT+AGG - chr8.2:21759445-21759464 MS.gene011504:CDS 30.0%
GATTCTGTGTTAGATTAGAT+TGG - chr8.2:21759023-21759042 MS.gene011504:intron 30.0%
GCTGACCATTACAAATTAAA+GGG - chr8.2:21760568-21760587 MS.gene011504:intron 30.0%
GTAGAAACATCAGTAATCAA+TGG - chr8.2:21760640-21760659 MS.gene011504:intron 30.0%
GTATGAAACCTCAAAATCAT+AGG + chr8.2:21758090-21758109 None:intergenic 30.0%
GTATGTTAGAACAATGAGTT+CGG - chr8.2:21759663-21759682 MS.gene011504:CDS 30.0%
TATCAACAAGTCTGAATTTC+AGG - chr8.2:21759814-21759833 MS.gene011504:intron 30.0%
TATTTCTTTGTAGTCACTCA+TGG + chr8.2:21759414-21759433 None:intergenic 30.0%
TGAATCACTTTATCCAACAT+AGG - chr8.2:21761194-21761213 MS.gene011504:CDS 30.0%
TGCTGACCATTACAAATTAA+AGG - chr8.2:21760567-21760586 MS.gene011504:intron 30.0%
TGTTCAAAATCGATGTTATC+AGG + chr8.2:21759189-21759208 None:intergenic 30.0%
TTATTAGACGTTATGAAGCA+CGG + chr8.2:21758609-21758628 None:intergenic 30.0%
TTGACAAAAAAAGCTCTGTT+TGG - chr8.2:21761279-21761298 MS.gene011504:CDS 30.0%
TTGCACTATTCAAATTCCAA+GGG - chr8.2:21760041-21760060 MS.gene011504:CDS 30.0%
TTGTATTTCAAGAAGTTACC+TGG + chr8.2:21759225-21759244 None:intergenic 30.0%
! ACTAGCTTAGATATTCATGT+TGG - chr8.2:21759900-21759919 MS.gene011504:intron 30.0%
! ATTTGTTCCCTATGATTTTG+AGG - chr8.2:21758079-21758098 MS.gene011504:CDS 30.0%
! GCTCTTTGAAAATTAAGTGA+AGG + chr8.2:21758843-21758862 None:intergenic 30.0%
! GTTTTGTCAAATTGATCATC+TGG + chr8.2:21760095-21760114 None:intergenic 30.0%
! TGGACAATCTTATTCTTTTC+TGG - chr8.2:21759920-21759939 MS.gene011504:intron 30.0%
!! ATTAATGTAGGCTTTGAGAA+AGG - chr8.2:21759077-21759096 MS.gene011504:intron 30.0%
!! TGTTGTTTGAGTTGAGTTTA+TGG - chr8.2:21758991-21759010 MS.gene011504:intron 30.0%
!! TTAAAAAATTGAGGGTACTG+AGG - chr8.2:21761122-21761141 MS.gene011504:intron 30.0%
!! TTATTCTTTTCTGGTAACCA+TGG - chr8.2:21759929-21759948 MS.gene011504:intron 30.0%
!!! GAGCTAAAAGCTCTTTTTTT+TGG + chr8.2:21761235-21761254 None:intergenic 30.0%
!!! GGATATGCATTTTTTGTTGT+AGG - chr8.2:21760733-21760752 MS.gene011504:intron 30.0%
!!! TTGTTGTTTTTATTGGCGAT+TGG - chr8.2:21758940-21758959 MS.gene011504:intron 30.0%
AAACAACCTACCAATGAATG+AGG + chr8.2:21758459-21758478 None:intergenic 35.0%
AAACGCTTGAATCATGAGTT+TGG + chr8.2:21761046-21761065 None:intergenic 35.0%
AACCTTGATTCATGGTATCT+TGG - chr8.2:21761787-21761806 MS.gene011504:intron 35.0%
AAGGTATATGAAGACCATAG+AGG + chr8.2:21759612-21759631 None:intergenic 35.0%
ACGAGCTTATAGCTTATTTC+AGG - chr8.2:21761327-21761346 MS.gene011504:CDS 35.0%
AGTGTAACATCATGCAAGTA+AGG + chr8.2:21760772-21760791 None:intergenic 35.0%
ATGAAAACCTCCTCATTCAT+TGG - chr8.2:21758446-21758465 MS.gene011504:intron 35.0%
ATGTTGTGCTTCTTAATGCA+TGG - chr8.2:21759552-21759571 MS.gene011504:CDS 35.0%
ATTGTCCTATTCCACCAAAA+TGG - chr8.2:21758763-21758782 MS.gene011504:intron 35.0%
CAACATTATGTACACGAAGT+CGG + chr8.2:21759791-21759810 None:intergenic 35.0%
CAAGTGATAAGTATGCATCT+TGG + chr8.2:21760710-21760729 None:intergenic 35.0%
CTTGCACTATTCAAATTCCA+AGG - chr8.2:21760040-21760059 MS.gene011504:CDS 35.0%
GAAAGAAGAAAAACCTGTTG+GGG + chr8.2:21758137-21758156 None:intergenic 35.0%
GAACAAATTGATGTCAAACC+AGG - chr8.2:21759204-21759223 MS.gene011504:CDS 35.0%
GAACAGAAAACCTTGATTCA+TGG - chr8.2:21761779-21761798 MS.gene011504:intron 35.0%
GAGAAAGAAGAAAAACCTGT+TGG + chr8.2:21758139-21758158 None:intergenic 35.0%
GTATACAATTTCTCTAGGCA+TGG - chr8.2:21759450-21759469 MS.gene011504:CDS 35.0%
GTTACATTAATAGTAGGACC+TGG + chr8.2:21758385-21758404 None:intergenic 35.0%
TCAAAAGGAACAGAAATGAC+GGG + chr8.2:21758903-21758922 None:intergenic 35.0%
TCTCTGCTAGAAGTAAGTTA+TGG + chr8.2:21759848-21759867 None:intergenic 35.0%
TCTGTGGTTTATTGTGTAGA+TGG - chr8.2:21760371-21760390 MS.gene011504:intron 35.0%
TGCACTATTCAAATTCCAAG+GGG - chr8.2:21760042-21760061 MS.gene011504:CDS 35.0%
TGGTCAAGAAACATACATCA+GGG - chr8.2:21761807-21761826 MS.gene011504:intron 35.0%
TGTGAATGTCCACAACAAAT+TGG - chr8.2:21758423-21758442 MS.gene011504:intron 35.0%
TTGATGAGAAAGAAGAAGAG+AGG + chr8.2:21758020-21758039 None:intergenic 35.0%
TTGGTCAAGAAACATACATC+AGG - chr8.2:21761806-21761825 MS.gene011504:intron 35.0%
TTTCATCTGCTTCAATCAAC+GGG - chr8.2:21762021-21762040 MS.gene011504:CDS 35.0%
! AGGATGAAATCTAGTTCAGT+TGG - chr8.2:21761142-21761161 MS.gene011504:CDS 35.0%
! CTTAATTTTCAAAGAGCAGC+TGG - chr8.2:21758846-21758865 MS.gene011504:intron 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr8.2:21761475-21761494 None:intergenic 35.0%
! GCTGAAGTTGTTATTCACTT+TGG - chr8.2:21762049-21762068 MS.gene011504:CDS 35.0%
! GTAATCAATGGAAGCTTTAG+AGG - chr8.2:21760652-21760671 MS.gene011504:intron 35.0%
! TTCTGTTCCTTTTGATACTC+CGG - chr8.2:21758908-21758927 MS.gene011504:intron 35.0%
! TTTCAAGTGAAGGATCAGAT+TGG - chr8.2:21758801-21758820 MS.gene011504:intron 35.0%
!! ATTGGTAGGTTGTTTTGTTG+TGG - chr8.2:21758464-21758483 MS.gene011504:intron 35.0%
!! CACTCATTTTTGCAATTCTG+TGG - chr8.2:21760355-21760374 MS.gene011504:intron 35.0%
!! CTAGATGATGGAAAAGATCT+TGG - chr8.2:21759102-21759121 MS.gene011504:intron 35.0%
!! TGGAAGCTTTAGAGGATTTA+TGG - chr8.2:21760660-21760679 MS.gene011504:intron 35.0%
!!! GGGGACATTGTTGTTTTTAT+TGG - chr8.2:21758933-21758952 MS.gene011504:intron 35.0%
!!! GGTAACTCAGTTTTGTTAGT+AGG + chr8.2:21761847-21761866 None:intergenic 35.0%
!!! GGTTTTCATCCAATTTGTTG+TGG + chr8.2:21758435-21758454 None:intergenic 35.0%
AAAACAACAATGTCCCCTTC+CGG + chr8.2:21758930-21758949 None:intergenic 40.0%
AAACCACCAGTGAAAATCGA+TGG - chr8.2:21760484-21760503 MS.gene011504:intron 40.0%
AAACCTCCTCATTCATTGGT+AGG - chr8.2:21758450-21758469 MS.gene011504:intron 40.0%
AAAGATCTTGGAATGCCAGA+TGG - chr8.2:21759114-21759133 MS.gene011504:intron 40.0%
AACCACCAGTGAAAATCGAT+GGG - chr8.2:21760485-21760504 MS.gene011504:intron 40.0%
ACGTGATTCATTCACAAACC+TGG + chr8.2:21759994-21760013 None:intergenic 40.0%
ATAAACCTAAACAGACGGCA+AGG + chr8.2:21761701-21761720 None:intergenic 40.0%
CAGATGGTGTTCTCATCAAT+GGG - chr8.2:21759130-21759149 MS.gene011504:intron 40.0%
CCAAACAGAGCCTTACTATT+TGG - chr8.2:21761591-21761610 MS.gene011504:intron 40.0%
CCAAATAGTAAGGCTCTGTT+TGG + chr8.2:21761594-21761613 None:intergenic 40.0%
CCACAAGGATCTTTCAGATA+TGG - chr8.2:21760424-21760443 MS.gene011504:intron 40.0%
CCAGGATAAACCTAAACAGA+CGG + chr8.2:21761706-21761725 None:intergenic 40.0%
CCATATCTGAAAGATCCTTG+TGG + chr8.2:21760427-21760446 None:intergenic 40.0%
CGACTTCGTGTACATAATGT+TGG - chr8.2:21759789-21759808 MS.gene011504:intron 40.0%
CTATTCCACCAAAATGGAAC+TGG - chr8.2:21758769-21758788 MS.gene011504:intron 40.0%
CTGAAAGATCCTTGTGGATT+TGG + chr8.2:21760421-21760440 None:intergenic 40.0%
CTGAAGTCTGCCACATTTAA+GGG + chr8.2:21761884-21761903 None:intergenic 40.0%
GACCAAGATACCATGAATCA+AGG + chr8.2:21761792-21761811 None:intergenic 40.0%
GCTATCAACAAACAGTTTCC+AGG - chr8.2:21758364-21758383 MS.gene011504:CDS 40.0%
GGTACATATAACAAGTGGGA+TGG - chr8.2:21760878-21760897 MS.gene011504:intron 40.0%
GGTTTGTGAATGAATCACGT+TGG - chr8.2:21759994-21760013 MS.gene011504:CDS 40.0%
GTAAATCTCTGTCACGTTGA+TGG + chr8.2:21760452-21760471 None:intergenic 40.0%
TAAACCTAAACAGACGGCAA+GGG + chr8.2:21761700-21761719 None:intergenic 40.0%
TATCCAACATAGGCTCTGTT+TGG - chr8.2:21761204-21761223 MS.gene011504:CDS 40.0%
TCAAATTGATCATCTGGACC+CGG + chr8.2:21760089-21760108 None:intergenic 40.0%
TCTGATCCTTCACTTGAAAC+TGG + chr8.2:21758800-21758819 None:intergenic 40.0%
TGAACCAAGCAAGATCTATC+AGG - chr8.2:21760123-21760142 MS.gene011504:CDS 40.0%
TGAACTTGCATTCTGATCCA+TGG + chr8.2:21759949-21759968 None:intergenic 40.0%
TGTCTCGTTTACTTACGCTT+CGG - chr8.2:21760185-21760204 MS.gene011504:CDS 40.0%
TTACCAAACAGAGCCTATGT+TGG + chr8.2:21761210-21761229 None:intergenic 40.0%
TTACTTCTAGCAGAGACTGA+AGG - chr8.2:21759852-21759871 MS.gene011504:intron 40.0%
! AAACTTGATCCATTGACTGC+AGG - chr8.2:21760822-21760841 MS.gene011504:intron 40.0%
! AATTTTCAAAGAGCAGCTGG+TGG - chr8.2:21758849-21758868 MS.gene011504:intron 40.0%
! ATTACTGATGTTTCTACCCG+AGG + chr8.2:21760637-21760656 None:intergenic 40.0%
! ATTGGTGGTTGAAATAGGTC+TGG - chr8.2:21758693-21758712 MS.gene011504:intron 40.0%
! CAGGGGTACATATAACAAGT+GGG - chr8.2:21760874-21760893 MS.gene011504:intron 40.0%
! GACTTACCAGTTTCAAGTGA+AGG - chr8.2:21758791-21758810 MS.gene011504:intron 40.0%
! GCACTCAAAGTTTTCCTCTA+TGG - chr8.2:21759595-21759614 MS.gene011504:CDS 40.0%
! TAAGTCCAGTTCCATTTTGG+TGG + chr8.2:21758777-21758796 None:intergenic 40.0%
! TGGTAAGTCCAGTTCCATTT+TGG + chr8.2:21758780-21758799 None:intergenic 40.0%
! TTCCTTTTGATACTCCGGAA+GGG - chr8.2:21758913-21758932 MS.gene011504:intron 40.0%
! TTGGTGGTTGAAATAGGTCT+GGG - chr8.2:21758694-21758713 MS.gene011504:intron 40.0%
! TTTAGGTTTATCCTGGAGCA+TGG - chr8.2:21761710-21761729 MS.gene011504:CDS 40.0%
!! AGATTGGTCTGAGAATAGCA+GGG - chr8.2:21760856-21760875 MS.gene011504:intron 40.0%
!! CACAGCAACATTGTTGTTTG+TGG + chr8.2:21758407-21758426 None:intergenic 40.0%
!! CAGTTCCATTTTGGTGGAAT+AGG + chr8.2:21758771-21758790 None:intergenic 40.0%
!! GGTAACACTTTAGCTCTGTT+TGG - chr8.2:21761300-21761319 MS.gene011504:CDS 40.0%
!! TTGAGAAAGGCTCTAGATGA+TGG - chr8.2:21759090-21759109 MS.gene011504:intron 40.0%
!!! CAAGTTTTGAGTGTTGCTGA+CGG + chr8.2:21760809-21760828 None:intergenic 40.0%
!!! TCAGTTTTGTTAGTAGGCTC+CGG + chr8.2:21761841-21761860 None:intergenic 40.0%
AATTCCAAGGGGAAAGCAAG+AGG - chr8.2:21760053-21760072 MS.gene011504:CDS 45.0%
AGATGGAACGTATCAGCAAG+TGG - chr8.2:21760388-21760407 MS.gene011504:intron 45.0%
AGCAAGAGGTCATTTACCAC+CGG - chr8.2:21760067-21760086 MS.gene011504:CDS 45.0%
ATACATCAGGGTTGTCAACC+CGG - chr8.2:21761819-21761838 MS.gene011504:intron 45.0%
CAACCTACCAATGAATGAGG+AGG + chr8.2:21758456-21758475 None:intergenic 45.0%
CAGTGAAAATCGATGGGAAG+CGG - chr8.2:21760491-21760510 MS.gene011504:intron 45.0%
CCAAACTCCAACATTGTCGA+GGG + chr8.2:21761752-21761771 None:intergenic 45.0%
CCAGACAATGCCCTTAAATG+TGG - chr8.2:21761871-21761890 MS.gene011504:intron 45.0%
CCAGATGGTGTTCTCATCAA+TGG - chr8.2:21759129-21759148 MS.gene011504:intron 45.0%
CCATTGATGAGAACACCATC+TGG + chr8.2:21759132-21759151 None:intergenic 45.0%
CTGCTTCAATCAACGGGAAT+GGG - chr8.2:21762027-21762046 MS.gene011504:CDS 45.0%
GACGTTATGAAGCACGGATA+CGG + chr8.2:21758603-21758622 None:intergenic 45.0%
GAGACCTGATAGATCTTGCT+TGG + chr8.2:21760130-21760149 None:intergenic 45.0%
GCATGGACACTCCTCATATT+AGG - chr8.2:21758541-21758560 MS.gene011504:intron 45.0%
GCTGAAGTCTGCCACATTTA+AGG + chr8.2:21761885-21761904 None:intergenic 45.0%
GGTGTTCTCATCAATGGGAA+AGG - chr8.2:21759135-21759154 MS.gene011504:intron 45.0%
TAATGGTCAGCAAGCCTGAT+TGG + chr8.2:21760559-21760578 None:intergenic 45.0%
TACATCACTGCTTCTCCTCT+TGG - chr8.2:21758107-21758126 MS.gene011504:intron 45.0%
TCATGGCAAGATGGTGTTCT+TGG - chr8.2:21758735-21758754 MS.gene011504:intron 45.0%
TCCAAACTCCAACATTGTCG+AGG + chr8.2:21761753-21761772 None:intergenic 45.0%
TCTGCTTCAATCAACGGGAA+TGG - chr8.2:21762026-21762045 MS.gene011504:CDS 45.0%
TGGTGGTTGAAATAGGTCTG+GGG - chr8.2:21758695-21758714 MS.gene011504:intron 45.0%
TTCAGCAAAGGAGGAGTTCA+TGG - chr8.2:21758718-21758737 MS.gene011504:intron 45.0%
TTGGTACACACGCAATCACA+CGG - chr8.2:21758959-21758978 MS.gene011504:intron 45.0%
! ATTGACTGCAGGATGGACTT+CGG - chr8.2:21760833-21760852 MS.gene011504:intron 45.0%
! CAGCTGAAGAGAGTGTAAGA+AGG + chr8.2:21758052-21758071 None:intergenic 45.0%
! CCGTCTGTTTAGGTTTATCC+TGG - chr8.2:21761703-21761722 MS.gene011504:CDS 45.0%
! GCAGGGGTACATATAACAAG+TGG - chr8.2:21760873-21760892 MS.gene011504:intron 45.0%
! GTTCCTTTTGATACTCCGGA+AGG - chr8.2:21758912-21758931 MS.gene011504:intron 45.0%
! TCCTTTTGATACTCCGGAAG+GGG - chr8.2:21758914-21758933 MS.gene011504:intron 45.0%
! TTGATCCATTGACTGCAGGA+TGG - chr8.2:21760826-21760845 MS.gene011504:intron 45.0%
!! AAGGAACAGAAATGACGGGT+CGG + chr8.2:21758899-21758918 None:intergenic 45.0%
!! CCACATTTAAGGGCATTGTC+TGG + chr8.2:21761874-21761893 None:intergenic 45.0%
!! GAGATTGGTCTGAGAATAGC+AGG - chr8.2:21760855-21760874 MS.gene011504:intron 45.0%
!! GATTGGTCTGAGAATAGCAG+GGG - chr8.2:21760857-21760876 MS.gene011504:intron 45.0%
!! GCTCGCTTGTTGTAAAAGAG+TGG + chr8.2:21761001-21761020 None:intergenic 45.0%
!! TTAAGGGCATTGTCTGGCAT+CGG + chr8.2:21761868-21761887 None:intergenic 45.0%
!!! CAGTTTTGTTAGTAGGCTCC+GGG + chr8.2:21761840-21761859 None:intergenic 45.0%
!!! TTCCCATCGATTTTCACTGG+TGG + chr8.2:21760490-21760509 None:intergenic 45.0%
!!! TAAAAGTTTATTTTTTTTAT+TGG - chr8.2:21758675-21758694 MS.gene011504:intron 5.0%
AAAACTGCTGTCCATGCTCC+AGG + chr8.2:21761724-21761743 None:intergenic 50.0%
AAGCGGAGAGCAACACTTAG+TGG - chr8.2:21760508-21760527 MS.gene011504:intron 50.0%
AATAGCTCGTACTACAGCGC+AGG - chr8.2:21760901-21760920 MS.gene011504:CDS 50.0%
AATTGATCATCTGGACCCGG+TGG + chr8.2:21760086-21760105 None:intergenic 50.0%
ACTACATTGTCGCAAGTGCC+AGG - chr8.2:21759973-21759992 MS.gene011504:CDS 50.0%
AGGAGGAGTTCATGGCAAGA+TGG - chr8.2:21758726-21758745 MS.gene011504:intron 50.0%
ATGAAGCACGGATACGGACA+TGG + chr8.2:21758597-21758616 None:intergenic 50.0%
ATGACCTCTTGCTTTCCCCT+TGG + chr8.2:21760060-21760079 None:intergenic 50.0%
CCCTCGACAATGTTGGAGTT+TGG - chr8.2:21761749-21761768 MS.gene011504:intron 50.0%
GAAGTCCATCCTGCAGTCAA+TGG + chr8.2:21760834-21760853 None:intergenic 50.0%
GATTCCCTTGCCGTCTGTTT+AGG - chr8.2:21761693-21761712 MS.gene011504:CDS 50.0%
GCAAGAGGTCATTTACCACC+GGG - chr8.2:21760068-21760087 MS.gene011504:CDS 50.0%
TCACGTTGGCAACGAGTTAC+TGG - chr8.2:21760008-21760027 MS.gene011504:CDS 50.0%
TCCTCATATTAGGCGTGTCC+CGG - chr8.2:21758551-21758570 MS.gene011504:intron 50.0%
TGGCAACGAGTTACTGGAGT+TGG - chr8.2:21760014-21760033 MS.gene011504:CDS 50.0%
TTGGTCTCCCTCGACAATGT+TGG - chr8.2:21761742-21761761 MS.gene011504:intron 50.0%
TTTCCCACGAAGCCTCTAAC+CGG - chr8.2:21760607-21760626 MS.gene011504:intron 50.0%
! ACTGATGTTTCTACCCGAGG+AGG + chr8.2:21760634-21760653 None:intergenic 50.0%
! ATAGGTCTGGGGTTCAGCAA+AGG - chr8.2:21758706-21758725 MS.gene011504:intron 50.0%
! TCCCCTTCCGGAGTATCAAA+AGG + chr8.2:21758918-21758937 None:intergenic 50.0%
! TGGAGCATGGACAGCAGTTT+TGG - chr8.2:21761723-21761742 MS.gene011504:CDS 50.0%
!! CAAAGAGCAGCTGGTGGATT+TGG - chr8.2:21758855-21758874 MS.gene011504:intron 50.0%
!!! CGCTTCCCATCGATTTTCAC+TGG + chr8.2:21760493-21760512 None:intergenic 50.0%
ACCGGGACACGCCTAATATG+AGG + chr8.2:21758555-21758574 None:intergenic 55.0%
CCAATCCTGCCACTCCAATC+AGG - chr8.2:21760542-21760561 MS.gene011504:intron 55.0%
CCTGATTGGAGTGGCAGGAT+TGG + chr8.2:21760545-21760564 None:intergenic 55.0%
GGTGCTCGTCCAAATCCACA+AGG - chr8.2:21760409-21760428 MS.gene011504:intron 55.0%
GTCAGCAAGCCTGATTGGAG+TGG + chr8.2:21760554-21760573 None:intergenic 55.0%
TATTAGGCGTGTCCCGGTGT+CGG - chr8.2:21758557-21758576 MS.gene011504:intron 55.0%
! ACCTGTTGGGGTACTCCAAG+AGG + chr8.2:21758125-21758144 None:intergenic 55.0%
! GCAGGATGGACTTCGGAGAT+TGG - chr8.2:21760840-21760859 MS.gene011504:intron 55.0%
! TCCTCTTGGAGTACCCCAAC+AGG - chr8.2:21758121-21758140 MS.gene011504:intron 55.0%
! TGTTTCTACCCGAGGAGGTC+CGG + chr8.2:21760629-21760648 None:intergenic 55.0%
!! AGAGCAGCTGGTGGATTTGG+TGG - chr8.2:21758858-21758877 MS.gene011504:intron 55.0%
ACTGACGTGTCTCCGACACC+GGG + chr8.2:21758572-21758591 None:intergenic 60.0%
AGCCTCTAACCGGACCTCCT+CGG - chr8.2:21760617-21760636 MS.gene011504:intron 60.0%
AGGTCCGGTTAGAGGCTTCG+TGG + chr8.2:21760614-21760633 None:intergenic 60.0%
CACTGACGTGTCTCCGACAC+CGG + chr8.2:21758573-21758592 None:intergenic 60.0%
GCAAGCCTGATTGGAGTGGC+AGG + chr8.2:21760550-21760569 None:intergenic 60.0%
GGTCCGGTTAGAGGCTTCGT+GGG + chr8.2:21760613-21760632 None:intergenic 60.0%
! GGTCTGGGGTTCAGCAAAGG+AGG - chr8.2:21758709-21758728 MS.gene011504:intron 60.0%
ACCCGAGGAGGTCCGGTTAG+AGG + chr8.2:21760622-21760641 None:intergenic 65.0%
GCCTCTAACCGGACCTCCTC+GGG - chr8.2:21760618-21760637 MS.gene011504:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 21758005 21762109 21758005 ID=MS.gene011504
chr8.2 mRNA 21758005 21762109 21758005 ID=MS.gene011504.t1;Parent=MS.gene011504
chr8.2 exon 21761972 21762109 21761972 ID=MS.gene011504.t1.exon1;Parent=MS.gene011504.t1
chr8.2 CDS 21761972 21762109 21761972 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21761647 21761756 21761647 ID=MS.gene011504.t1.exon2;Parent=MS.gene011504.t1
chr8.2 CDS 21761647 21761756 21761647 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21761134 21761404 21761134 ID=MS.gene011504.t1.exon3;Parent=MS.gene011504.t1
chr8.2 CDS 21761134 21761404 21761134 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21760889 21761027 21760889 ID=MS.gene011504.t1.exon4;Parent=MS.gene011504.t1
chr8.2 CDS 21760889 21761027 21760889 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21759970 21760336 21759970 ID=MS.gene011504.t1.exon5;Parent=MS.gene011504.t1
chr8.2 CDS 21759970 21760336 21759970 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21759359 21759724 21759359 ID=MS.gene011504.t1.exon6;Parent=MS.gene011504.t1
chr8.2 CDS 21759359 21759724 21759359 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21759192 21759270 21759192 ID=MS.gene011504.t1.exon7;Parent=MS.gene011504.t1
chr8.2 CDS 21759192 21759270 21759192 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21758200 21758399 21758200 ID=MS.gene011504.t1.exon8;Parent=MS.gene011504.t1
chr8.2 CDS 21758200 21758399 21758200 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
chr8.2 exon 21758005 21758107 21758005 ID=MS.gene011504.t1.exon9;Parent=MS.gene011504.t1
chr8.2 CDS 21758005 21758107 21758005 ID=cds.MS.gene011504.t1;Parent=MS.gene011504.t1
Gene Sequence

>MS.gene011504

ATGGCTTCTTCACCTCTCTTCTTCTTTCTCATCAACATTTTCTTCCTTCTTACACTCTCTTCAGCTGAAGATGCATTTGTTCCCTATGATTTTGAGGTTTCATACATCACTGCTTCTCCTCTTGGAGTACCCCAACAGGTTTTTCTTCTTTCTCTTACTATTTTTGGAAATGGGTATGTTCACTTTTTTACTAACTCACTTTGAATTTACTAAAGTTTCAAACTTTACTTTCAGATCTACATCTAAATAGTAATGTTATAGTTAAACTTGAAAAGGGTTATTGTAAATGTGACTGAGTTATATAGAAAAGATGTAAAGGTTTTTTTTAGTAATGTTTTTCATTGTTTATGTAGGTCATTGCTATCAACAAACAGTTTCCAGGTCCTACTATTAATGTAACCACAAACAACAATGTTGCTGTGAATGTCCACAACAAATTGGATGAAAACCTCCTCATTCATTGGTAGGTTGTTTTGTTGTGGATTATTAGATGTAACTAGTGTAACTAACTGTTTTAACTAACTATTATGTATGAAGCATGGACACTCCTCATATTAGGCGTGTCCCGGTGTCGGAGACACGTCAGTGTCCATGTCCGTATCCGTGCTTCATAACGTCTAATAACGATTTTTGTTTAAAAAGTTGAAAACTTTGGTTTTGTTAATTGAGCTAAAAGTTTATTTTTTTTATTGGTGGTTGAAATAGGTCTGGGGTTCAGCAAAGGAGGAGTTCATGGCAAGATGGTGTTCTTGGAACAAATTGTCCTATTCCACCAAAATGGAACTGGACTTACCAGTTTCAAGTGAAGGATCAGATTGGAAGTTTCTTCTACTTTCCTTCACTTAATTTTCAAAGAGCAGCTGGTGGATTTGGTGGTTTCATTATAAACAACCGACCCGTCATTTCTGTTCCTTTTGATACTCCGGAAGGGGACATTGTTGTTTTTATTGGCGATTGGTACACACGCAATCACACGGTTAGTTTTGTGTTGTTTGAGTTGAGTTTATGGAAATTTTCTGATTCTGTGTTAGATTAGATTGGATGTTAGATGAGTTAATTAAAGTTTTTTGAAATTAATGTAGGCTTTGAGAAAGGCTCTAGATGATGGAAAAGATCTTGGAATGCCAGATGGTGTTCTCATCAATGGGAAAGGCCCTTATAGATATAATGACACTCTTGTTCCTGATAACATCGATTTTGAACAAATTGATGTCAAACCAGGTAACTTCTTGAAATACAAACTCAACTTTGAATTCTCTGATTTTTTTAGTTATTTACTTTTCAAATACTGATATGGATGTTTTTTGTTTGGTTTTATGATTAATAATTTAGTTATTTGTTTTTCAAATACTGATATGGATGTTTTTTGTTTGATTTTATGTTTAATAATAAATACAAGAGAAGTTCCATGAGTGACTACAAAGAAATAAACTTTAATGTCTCTTGTATACAATTTCTCTAGGCATGGAAACACAATATCACTCACTAATGAATGATAGCTGTTTTGCTTTTAGTAAATTAAGATTAGGCACTCAAAAGGTTCTCTAATGTTGTGCTTCTTAATGCATGGAAACAAAAATAGATTTGTAAGCACTCAAAGTTTTCCTCTATGGTCTTCATATACCTTGACTAATATCTGTTAGTAGAGTACAAAGTGTGTATGTTAGAACAATGAGTTCGGATAGATGTGAGCTTGATGTTATGACATTCTTCAGTCTTGATGATGATTTACCTGTCAAATGTTTCTAATGTTTCTTTGTTAATTTTTAACAGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTCTAGCAGAGACTGAAGGCTCATATACAATGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGGTAACCATGGATCAGAATGCAAGTTCAGATTACTACATTGTCGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAACGAGTTACTGGAGTTGGTATCTTGCACTATTCAAATTCCAAGGGGAAAGCAAGAGGTCATTTACCACCGGGTCCAGATGATCAATTTGACAAAACTTTCTCAATGAACCAAGCAAGATCTATCAGGTCTCTTCATACTCCAGTTCTATAGAATTATATATTATCTTGTCTCGTTTACTTACGCTTCGGTTTCGAGCAACTGTCTGAAATTTGTCAATAAGTTATCAACTTTAGAATTCATTAGGTCTCATCCGTGTTGACATATTAAATATGTTGTAATCAAACTTTATACTGTGAAGTTCCACTAATGCAGACTATATAATTGAAAAATATTAGCACTCATTTTTGCAATTCTGTGGTTTATTGTGTAGATGGAACGTATCAGCAAGTGGTGCTCGTCCAAATCCACAAGGATCTTTCAGATATGGTTCCATCAACGTGACAGAGATTTACGTATTGAAAAATAAACCACCAGTGAAAATCGATGGGAAGCGGAGAGCAACACTTAGTGGAATTTCTTTTGCCAATCCTGCCACTCCAATCAGGCTTGCTGACCATTACAAATTAAAGGGAGTATACAAACTTGATTTTCCCACGAAGCCTCTAACCGGACCTCCTCGGGTAGAAACATCAGTAATCAATGGAAGCTTTAGAGGATTTATGGAAATTATACTGCAGAACAATGACACCAAGATGCATACTTATCACTTGAATGGATATGCATTTTTTGTTGTAGGGTAAGATTCTATTCCTTACTTGCATGATGTTACACTTTTACATGTTTTAGCCGTCAGCAACACTCAAAACTTGATCCATTGACTGCAGGATGGACTTCGGAGATTGGTCTGAGAATAGCAGGGGTACATATAACAAGTGGGATGGAATAGCTCGTACTACAGCGCAGGTATATTTTCTGTCTTAGAATGCATGTCGATCAAGCAAAGCTTTACTTGTTTTTAACAAGCTCGACATTCAAACTCCACTCTTTTACAACAAGCGAGCAACCTTCTTTTTTTTTCATAAACCAAACTCATGATTCAAGCGTTTGACTTGACTCAACTCGTTTACATCCTTGATTTTCATCATTGACTTTTGTTTTGTTTTTAAAAAATTGAGGGTACTGAGGATGAAATCTAGTTCAGTTGGTCAAAAGAATTTATGGTGCTACATCAAAATGAATCACTTTATCCAACATAGGCTCTGTTTGGTAAACCCAAAAAAAAGAGCTTTTAGCTCTTAGCTTTTAGCTTATAAGCTCATTTGACAAAAAAAGCTCTGTTTGGTAACACTTTAGCTCTGTTTGGTACAACGAGCTTATAGCTTATTTCAGGAGCTTATAAGCTATTTTTCAGAAGCTACTTCAAGTAGCTTTTGAGCTTATAGCTTTTAGCTTCTCATTTTTTCTTCCATATTTACCCTTATTATTCAAAGCAAAAGCTATCAGCTAATTTTACCAAACACTTCAACTAGCTTATCAGCTAAAAGCTATCAGCTAGCTTATCAACTAAAAGCTATCAGCTAGCTTATCAGCTAAAAGTTATCAGCTAGCTTATCAGCTATCAGCTAATTTTACCAAACAGAGCCTTACTATTTGGTTTACTACATGTCTTTCATATGACTTTGTCATAACTGCTATTGCATCATGTATCCTACAAGTTTTATACACAACTATTTGATTCCCTTGCCGTCTGTTTAGGTTTATCCTGGAGCATGGACAGCAGTTTTGGTCTCCCTCGACAATGTTGGAGTTTGGAATCTAAGAACAGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATACATCAGGGTTGTCAACCCGGAGCCTACTAACAAAACTGAGTTACCGATGCCAGACAATGCCCTTAAATGTGGCAGACTTCAGCATTTGCAAAAGTATGTTACATTATCATTCTTCAGTATGTTAAATTAAAAGTATGTTACATAAAAAAAGTTGTTAAATTTTGATGTAAATTTTCTTGTTTCAGGCCTCAAAAAATTATTTCATCTGCTTCAATCAACGGGAATGGGCTGAAGTTGTTATTCACTTTGGTGATGTTTGTATGTGCCATAATGAACATTTTTCAGTAA
Protein sequence

>MS.gene011504.t1

MASSPLFFFLINIFFLLTLSSAEDAFVPYDFEVSYITASPLGVPQQVIAINKQFPGPTINVTTNNNVAVNVHNKLDENLLIHWSGVQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNFQRAAGGFGGFIINNRPVISVPFDTPEGDIVVFIGDWYTRNHTALRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPDNIDFEQIDVKPGKTYRLRVHNVGISTSLNFRIQNHNLLLAETEGSYTMQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQRVTGVGILHYSNSKGKARGHLPPGPDDQFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPPVKIDGKRRATLSGISFANPATPIRLADHYKLKGVYKLDFPTKPLTGPPRVETSVINGSFRGFMEIILQNNDTKMHTYHLNGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPMPDNALKCGRLQHLQKPQKIISSASINGNGLKLLFTLVMFVCAIMNIFQ