AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058407

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058407.t1 MTR_3g008580 95.939 591 24 0 1 591 1 591 0.0 1150
MS.gene058407.t1 MTR_4g101650 68.276 580 184 0 8 587 6 585 0.0 809
MS.gene058407.t1 MTR_7g051440 64.148 569 197 4 22 586 22 587 0.0 722
MS.gene058407.t1 MTR_3g115050 50.000 528 243 7 26 552 27 534 2.61e-175 508
MS.gene058407.t1 MTR_4g049390 48.030 533 255 7 22 552 19 531 2.27e-170 495
MS.gene058407.t1 MTR_4g075690 47.920 553 257 8 1 552 11 533 4.37e-170 494
MS.gene058407.t1 MTR_1g026410 48.168 546 262 6 8 552 8 533 2.57e-168 490
MS.gene058407.t1 MTR_8g479390 48.077 520 246 7 35 552 37 534 1.99e-167 488
MS.gene058407.t1 MTR_5g018270 50.195 512 232 6 41 552 43 531 3.99e-167 486
MS.gene058407.t1 MTR_8g479380 47.547 530 250 7 34 559 34 539 2.53e-166 484
MS.gene058407.t1 MTR_4g048350 47.842 533 255 8 22 552 19 530 2.81e-166 484
MS.gene058407.t1 MTR_1g090707 47.532 547 270 10 12 555 8 540 2.99e-166 486
MS.gene058407.t1 MTR_2g088080 48.295 528 252 6 26 552 27 534 3.57e-164 479
MS.gene058407.t1 MTR_4g132320 46.069 547 274 6 7 552 9 535 8.30e-161 471
MS.gene058407.t1 MTR_4g083190 45.570 553 277 9 4 552 6 538 8.15e-156 458
MS.gene058407.t1 MTR_3g083450 45.522 536 270 9 22 552 19 537 1.67e-148 439
MS.gene058407.t1 MTR_3g083390 44.304 553 284 10 5 552 3 536 5.86e-148 438
MS.gene058407.t1 MTR_3g083440 44.123 553 285 10 5 552 3 536 1.05e-147 437
MS.gene058407.t1 MTR_3g083400 43.942 553 286 10 5 552 3 536 2.30e-146 434
MS.gene058407.t1 MTR_3g083430 44.123 553 285 10 5 552 3 536 2.40e-146 434
MS.gene058407.t1 MTR_2g088080 48.203 473 224 6 81 552 1 453 2.28e-145 428
MS.gene058407.t1 MTR_4g083210 43.091 550 285 9 9 552 5 532 3.13e-144 428
MS.gene058407.t1 MTR_3g083410 44.423 511 256 8 50 552 10 500 9.07e-137 408
MS.gene058407.t1 MTR_4g075690 46.895 467 217 8 1 466 11 447 1.18e-134 400
MS.gene058407.t1 MTR_5g020620 29.138 580 360 19 1 551 4 561 7.50e-55 195
MS.gene058407.t1 MTR_5g020600 27.737 548 343 19 1 516 5 531 2.52e-50 183
MS.gene058407.t1 MTR_7g062250 27.675 542 352 16 3 516 14 543 1.67e-49 181
MS.gene058407.t1 MTR_3g078740 26.435 575 351 16 32 552 29 585 1.13e-48 179
MS.gene058407.t1 MTR_7g058690 27.848 553 343 20 4 516 9 545 4.84e-48 177
MS.gene058407.t1 MTR_5g069680 28.466 541 344 19 1 516 1 523 4.41e-47 174
MS.gene058407.t1 MTR_8g027375 27.122 542 351 15 10 516 4 536 9.45e-47 173
MS.gene058407.t1 MTR_4g015120 25.448 558 355 15 30 551 25 557 1.21e-46 172
MS.gene058407.t1 MTR_7g060460 27.555 548 349 16 3 516 13 546 1.28e-46 173
MS.gene058407.t1 MTR_7g458880 26.916 509 319 17 47 516 51 545 1.20e-45 170
MS.gene058407.t1 MTR_4g064530 25.859 553 349 15 4 516 19 550 1.18e-43 164
MS.gene058407.t1 MTR_8g091390 28.000 550 331 17 41 552 46 568 1.45e-43 164
MS.gene058407.t1 MTR_5g081810 27.944 501 307 17 47 516 17 494 7.40e-43 161
MS.gene058407.t1 MTR_3g462760 26.706 513 328 14 32 516 29 521 7.98e-43 162
MS.gene058407.t1 MTR_4g064530 26.007 546 343 15 4 509 19 543 1.94e-42 160
MS.gene058407.t1 MTR_5g073210 27.256 554 359 16 8 533 5 542 5.15e-42 159
MS.gene058407.t1 MTR_3g078700 25.836 538 318 19 49 552 46 536 6.88e-40 153
MS.gene058407.t1 MTR_5g083360 26.786 560 351 21 32 551 27 567 1.53e-39 152
MS.gene058407.t1 MTR_2g008330 26.703 543 351 17 7 516 16 544 2.36e-39 152
MS.gene058407.t1 MTR_7g062310 27.200 500 328 15 47 516 65 558 5.89e-38 148
MS.gene058407.t1 MTR_4g133150 39.912 228 97 7 133 357 21 211 7.85e-38 139
MS.gene058407.t1 MTR_3g071890 26.705 528 347 18 7 507 12 526 1.21e-37 147
MS.gene058407.t1 MTR_3g101635 26.374 546 365 15 15 533 13 548 4.13e-37 145
MS.gene058407.t1 MTR_3g101640 25.699 572 388 16 10 551 7 571 6.31e-37 145
MS.gene058407.t1 MTR_7g065970 25.835 569 369 17 1 533 1 552 3.34e-36 143
MS.gene058407.t1 MTR_4g019225 24.682 551 375 12 33 551 30 572 2.72e-35 140
MS.gene058407.t1 MTR_3g078730 25.182 548 325 17 41 552 37 535 1.75e-33 135
MS.gene058407.t1 MTR_7g065980 26.117 582 376 17 13 551 1 571 1.99e-31 129
MS.gene058407.t1 MTR_4g133160 35.238 105 54 2 433 537 1 91 6.10e-15 71.2
MS.gene058407.t1 MTR_5g018290 50.000 60 30 0 493 552 5 64 5.02e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058407.t1 AT4G25240 68.806 561 174 1 8 568 8 567 0.0 815
MS.gene058407.t1 AT4G25240 68.806 561 174 1 8 568 8 567 0.0 815
MS.gene058407.t1 AT5G51480 65.559 572 194 3 21 590 20 590 0.0 807
MS.gene058407.t1 AT4G12420 66.667 570 186 1 1 570 1 566 0.0 806
MS.gene058407.t1 AT4G12420 66.667 570 186 1 1 570 1 566 0.0 806
MS.gene058407.t1 AT5G48450 58.974 585 220 7 13 591 13 583 0.0 692
MS.gene058407.t1 AT5G48450 59.278 582 216 7 13 586 13 581 0.0 692
MS.gene058407.t1 AT1G21850 47.698 543 261 6 11 552 11 531 1.66e-171 498
MS.gene058407.t1 AT4G22010 49.136 521 243 7 42 560 39 539 2.43e-169 493
MS.gene058407.t1 AT1G76160 46.014 552 274 7 2 552 3 531 1.96e-166 485
MS.gene058407.t1 AT1G21860 45.672 543 272 6 11 552 11 531 5.47e-165 481
MS.gene058407.t1 AT4G38420 46.909 550 264 9 10 552 12 540 9.56e-164 478
MS.gene058407.t1 AT1G41830 45.276 561 284 8 1 560 2 540 2.29e-162 474
MS.gene058407.t1 AT1G55570 44.227 563 291 8 2 559 4 548 7.79e-160 469
MS.gene058407.t1 AT1G55560 44.771 545 277 9 15 552 10 537 1.01e-158 466
MS.gene058407.t1 AT1G75790 44.424 547 272 8 21 555 19 545 1.06e-158 465
MS.gene058407.t1 AT3G13400 45.372 551 277 9 8 552 6 538 8.31e-157 461
MS.gene058407.t1 AT3G13400 45.372 551 277 9 8 552 6 538 8.31e-157 461
MS.gene058407.t1 AT4G28090 47.461 512 245 10 45 552 44 535 1.40e-156 460
MS.gene058407.t1 AT3G13390 46.429 532 264 7 26 552 25 540 1.63e-156 460
MS.gene058407.t1 AT5G66920 45.331 514 256 7 41 552 49 539 2.54e-156 459
MS.gene058407.t1 AT4G37160 47.398 538 260 8 17 552 19 535 6.92e-155 456
MS.gene058407.t1 AT2G23630 45.505 545 268 8 22 558 21 544 5.40e-148 438
MS.gene058407.t1 AT2G23630 45.505 545 268 8 22 558 16 539 5.41e-148 438
MS.gene058407.t1 AT4G38420 46.341 492 236 9 9 493 11 481 1.86e-139 414
MS.gene058407.t1 AT4G38420 45.161 465 227 9 9 466 11 454 6.25e-127 381
MS.gene058407.t1 AT4G37160 46.460 452 219 8 17 466 19 449 4.33e-122 368
MS.gene058407.t1 AT4G39830 26.976 582 366 16 8 552 19 578 1.30e-53 192
MS.gene058407.t1 AT5G21105 28.285 548 320 19 49 552 58 576 1.70e-48 178
MS.gene058407.t1 AT5G21100 26.374 546 332 16 49 552 44 561 1.89e-47 175
MS.gene058407.t1 AT5G21105 29.307 505 289 18 49 509 58 538 3.33e-47 174
MS.gene058407.t1 AT1G18140 27.715 534 306 20 47 524 47 556 1.85e-45 169
MS.gene058407.t1 AT2G46570 26.087 598 356 15 3 551 9 569 7.01e-45 168
MS.gene058407.t1 AT2G30210 27.993 543 347 18 5 516 6 535 2.82e-44 166
MS.gene058407.t1 AT5G60020 27.007 548 346 18 13 516 5 542 7.88e-44 165
MS.gene058407.t1 AT5G58910 27.339 545 345 20 5 516 6 532 1.11e-43 164
MS.gene058407.t1 AT5G48100 27.256 543 347 16 6 520 9 531 2.28e-43 163
MS.gene058407.t1 AT5G60020 27.206 544 342 18 13 512 5 538 6.17e-43 162
MS.gene058407.t1 AT5G60020 27.451 510 320 17 47 516 11 510 1.03e-42 161
MS.gene058407.t1 AT5G58910 28.320 512 316 20 38 516 38 531 1.11e-42 161
MS.gene058407.t1 AT5G03260 29.681 502 298 18 47 516 44 522 2.03e-42 160
MS.gene058407.t1 AT4G39830 26.316 494 310 13 95 552 6 481 1.47e-41 157
MS.gene058407.t1 AT5G01190 27.022 544 341 16 8 516 1 523 1.57e-41 158
MS.gene058407.t1 AT4G39830 26.316 494 310 13 95 552 8 483 1.75e-41 157
MS.gene058407.t1 AT5G01190 27.455 499 311 14 49 516 31 509 3.18e-40 154
MS.gene058407.t1 AT5G09360 25.836 538 336 18 17 516 22 534 1.49e-39 152
MS.gene058407.t1 AT5G58910 27.984 511 312 20 38 516 2 488 2.33e-39 151
MS.gene058407.t1 AT2G29130 25.344 509 323 15 47 516 48 538 4.08e-39 151
MS.gene058407.t1 AT2G38080 25.461 542 348 18 8 516 5 523 5.82e-39 151
MS.gene058407.t1 AT3G09220 26.233 507 333 14 35 511 32 527 1.40e-38 150
MS.gene058407.t1 AT5G05390 25.655 534 357 16 13 516 7 530 9.98e-38 147
MS.gene058407.t1 AT4G39830 25.506 494 301 13 95 552 8 470 4.80e-37 144
MS.gene058407.t1 AT5G01040 26.716 539 329 16 13 511 14 526 1.30e-36 144
MS.gene058407.t1 AT5G01050 25.000 580 369 15 13 551 14 568 9.56e-34 136
MS.gene058407.t1 AT2G46570 26.070 514 297 14 87 551 5 484 1.75e-32 131
MS.gene058407.t1 AT2G40370 24.014 558 369 18 1 516 1 545 3.68e-32 131
MS.gene058407.t1 AT5G07130 24.698 579 382 18 11 551 7 569 1.91e-31 129
MS.gene058407.t1 AT5G21105 28.030 396 226 13 193 552 13 385 1.57e-29 121
MS.gene058407.t1 AT3G09220 25.513 439 287 13 102 511 3 430 2.20e-27 115
MS.gene058407.t1 AT5G07130 24.900 498 321 17 92 551 2 484 2.25e-21 98.2
MS.gene058407.t1 AT5G07130 24.900 498 321 17 92 551 2 484 2.25e-21 98.2

Find 137 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCAACGGTACATATAA+AGG 0.235380 3.2:+2973209 MS.gene058407:CDS
CAAAGAGCTTCTGGTGGATT+TGG 0.242544 3.2:+2969932 MS.gene058407:CDS
TGTTCTGTTCATCGGCTTGC+TGG 0.257454 3.2:-2973168 None:intergenic
TCTGTGTCGCCCGCTTCTTC+AGG 0.260513 3.2:-2974160 None:intergenic
GAATCTGAGAGCAGAAAATT+TGG 0.265348 3.2:+2974093 MS.gene058407:CDS
CAATTCCATTTCGAAGGAAT+TGG 0.268802 3.2:-2969845 None:intergenic
TTGTAGGTTATAGCTATAAA+TGG 0.270636 3.2:+2969382 MS.gene058407:intron
TAGTTGAAATTCCCACATTA+TGG 0.287649 3.2:-2971642 None:intergenic
TTCTTACCCAACAACGAAAA+AGG 0.291492 3.2:-2973297 None:intergenic
TCCACCACTGCTTCTCCTCT+TGG 0.296372 3.2:+2968473 MS.gene058407:CDS
TTTCAAGTGAAGGATCAAAT+AGG 0.305138 3.2:+2969878 MS.gene058407:CDS
CAAATCCACCAGAAGCTCTT+TGG 0.332368 3.2:-2969931 None:intergenic
CTTGGATTTAGGATGGACTA+TGG 0.332483 3.2:+2973391 MS.gene058407:intron
CAATTCCTTCGAAATGGAAT+TGG 0.334883 3.2:+2969846 MS.gene058407:CDS
GTTTCATGATCTATCCCATT+AGG 0.337800 3.2:-2971062 None:intergenic
TCCTCTTGGTGTTCCTCAAA+AGG 0.338699 3.2:+2968487 MS.gene058407:CDS
GCTATAAATGGGAAATTTCC+TGG 0.342290 3.2:+2969394 MS.gene058407:CDS
ACCCATCCAGATGAAAGTTT+TGG 0.347652 3.2:-2973271 None:intergenic
AATAATACTCTGGTACCTAA+TGG 0.349217 3.2:+2971047 MS.gene058407:CDS
ACTAATTTCCAAAGAGCTTC+TGG 0.362239 3.2:+2969923 MS.gene058407:CDS
TCATTATGGCAGAAGGTTAC+AGG 0.370428 3.2:+2971850 MS.gene058407:CDS
CGAAAGGACCCTTGAGGGTT+AGG 0.374840 3.2:-2972975 None:intergenic
TAAAACCTGACGTTCCGTTT+CGG 0.375200 3.2:+2973099 MS.gene058407:CDS
GTCCCTTTGTTATCAACAAT+AGG 0.376747 3.2:+2969954 MS.gene058407:CDS
TCCCTTTGTTATCAACAATA+GGG 0.381706 3.2:+2969955 MS.gene058407:CDS
GGTTTGTGAATGAATCATTA+TGG 0.383149 3.2:+2971836 MS.gene058407:CDS
ATTGTCCAATTCCTTCGAAA+TGG 0.389205 3.2:+2969840 MS.gene058407:CDS
AATTCCAAGGGTGGAGCATC+TGG 0.393938 3.2:+2971895 MS.gene058407:CDS
CCAGATGGTGTTCTTATCAA+TGG 0.394586 3.2:+2971005 MS.gene058407:CDS
AGTAGTCTGTACTTGCGTTC+TGG 0.398114 3.2:-2971795 None:intergenic
TCGTGGCAGGATGGAGTTCT+TGG 0.405129 3.2:+2969812 MS.gene058407:CDS
AGAAGCTCTTTGGAAATTAG+TGG 0.406173 3.2:-2969921 None:intergenic
ATAATACTCTGGTACCTAAT+GGG 0.409806 3.2:+2971048 MS.gene058407:CDS
TCAAAATCATAATCTATTGC+TGG 0.416012 3.2:+2971681 MS.gene058407:CDS
TCACCGTCGGGCTGCGCAAA+AGG 0.416320 3.2:-2969992 None:intergenic
CAAGAAACACTTACAATAAG+TGG 0.417064 3.2:+2973431 MS.gene058407:CDS
CTCTGTCCAAAACTTTCATC+TGG 0.418687 3.2:+2973265 MS.gene058407:CDS
CTAACCCTCAAGGGTCCTTT+CGG 0.421813 3.2:+2972976 MS.gene058407:CDS
CCACATTATGGACACGAATT+CGG 0.426819 3.2:-2971630 None:intergenic
ACAACTCGAGCTGCAATTAA+CGG 0.437704 3.2:+2973065 MS.gene058407:CDS
GTCCAAAACTTTCATCTGGA+TGG 0.440283 3.2:+2973269 MS.gene058407:CDS
TTCAAGTGAAGGATCAAATA+GGG 0.440677 3.2:+2969879 MS.gene058407:CDS
TGGAGCATGGACAGCAATCC+TGG 0.442003 3.2:+2974045 MS.gene058407:CDS
TGTAGGTTATAGCTATAAAT+GGG 0.443651 3.2:+2969383 MS.gene058407:intron
ATCACTGGTGTTCTGTTCAT+CGG 0.467144 3.2:-2973176 None:intergenic
TCATCAACGGTACATATAAA+GGG 0.471123 3.2:+2973210 MS.gene058407:CDS
AGGATTGCTGTCCATGCTCC+AGG 0.473930 3.2:-2974043 None:intergenic
GTTCTGTTCATCGGCTTGCT+GGG 0.478544 3.2:-2973167 None:intergenic
TCATCTGGTGGTGGTGGCAG+AGG 0.480319 3.2:-2971919 None:intergenic
AGAGTATTATTGTACTGATA+AGG 0.480921 3.2:-2971035 None:intergenic
TCCCTATTGTTGATAACAAA+GGG 0.489298 3.2:-2969956 None:intergenic
CAGATGGTGTTCTTATCAAT+GGG 0.490691 3.2:+2971006 MS.gene058407:CDS
TTCCCATGAGCAATGTGAAA+AGG 0.492544 3.2:-2974616 None:intergenic
GCAAGCCGAAACGGAACGTC+AGG 0.492678 3.2:-2973104 None:intergenic
AGGACCAGATGCTCCACCCT+TGG 0.494547 3.2:-2971899 None:intergenic
CTCTAGACAATGTTGGATCA+TGG 0.498904 3.2:+2974071 MS.gene058407:CDS
TTTACACTACTCAAATTCCA+AGG 0.507295 3.2:+2971882 MS.gene058407:CDS
ACCAACTTTGATATTCATGC+TGG 0.519723 3.2:+2971742 MS.gene058407:CDS
GAAACAATTACTGTTGATCC+AGG 0.523157 3.2:+2971080 MS.gene058407:CDS
GCTCTAAGATCAACACTTGA+CGG 0.523581 3.2:+2970963 MS.gene058407:CDS
GAAGCGGGCGACACAGAGAC+TGG 0.528313 3.2:+2974166 MS.gene058407:CDS
TGAAGTTCTGTGTAAACAGT+TGG 0.529500 3.2:-2968443 None:intergenic
ACCAAGAGGAGAAGCAGTGG+TGG 0.530783 3.2:-2968474 None:intergenic
CCGAATTCGTGTCCATAATG+TGG 0.531461 3.2:+2971630 MS.gene058407:CDS
GCTGACAACAATCAGCTAAG+AGG 0.532345 3.2:+2973125 MS.gene058407:CDS
GCAGATTCTACTTTGAGAAG+TGG 0.534225 3.2:+2974590 MS.gene058407:CDS
CTCCCTATTGTTGATAACAA+AGG 0.534422 3.2:-2969957 None:intergenic
CCATTGATAAGAACACCATC+TGG 0.534528 3.2:-2971005 None:intergenic
AGAGCAGAAAAGAGTAGGAC+TGG 0.537825 3.2:-2971765 None:intergenic
TGAAGGGTATTACACCGATC+AGG 0.538222 3.2:+2971711 MS.gene058407:CDS
GTCTGTACTTGCGTTCTGGT+CGG 0.542837 3.2:-2971791 None:intergenic
TTTGTAGTAACATTAATCAC+AGG 0.544812 3.2:-2969418 None:intergenic
TTGTTGTCAGCAAGCCGAAA+CGG 0.546970 3.2:-2973113 None:intergenic
CGTACCGAAAGGACCCTTGA+GGG 0.550715 3.2:-2972980 None:intergenic
TACGTCCAATTCCATTTCGA+AGG 0.554756 3.2:-2969851 None:intergenic
CATAATGAAAATTTCACCGT+CGG 0.555555 3.2:-2970005 None:intergenic
GTTGTGCCGTTGATCGCCAC+CGG 0.555618 3.2:-2973047 None:intergenic
AATGCGGCGTAACTCGTGGC+AGG 0.556140 3.2:+2969799 MS.gene058407:CDS
CTCTTTGGAAATTAGTGGAA+GGG 0.556284 3.2:-2969916 None:intergenic
TCCAAAACTTTCATCTGGAT+GGG 0.556839 3.2:+2973270 MS.gene058407:CDS
ATAATGAAAATTTCACCGTC+GGG 0.559708 3.2:-2970004 None:intergenic
GTAACATTAATCACAGGTCC+AGG 0.563672 3.2:-2969412 None:intergenic
AGTGAATGTGTATAATCAGC+TGG 0.564829 3.2:+2969453 MS.gene058407:CDS
CGAATTCGTGTCCATAATGT+GGG 0.565215 3.2:+2971631 MS.gene058407:CDS
ATGATTGATCTATCAATCAC+TGG 0.566439 3.2:-2973191 None:intergenic
GACGTATCAGTTTCAAGTGA+AGG 0.566878 3.2:+2969868 MS.gene058407:CDS
GTTGGTGTAATTTGCCTGAT+CGG 0.567425 3.2:-2971725 None:intergenic
GCCAGCATGAATATCAAAGT+TGG 0.570786 3.2:-2971743 None:intergenic
ACAGCACCGGTGGCGATCAA+CGG 0.572276 3.2:+2973041 MS.gene058407:CDS
TGAGAGCAGAAAATTTGGAC+AGG 0.573207 3.2:+2974098 MS.gene058407:CDS
TGTACTTGCGTTCTGGTCGG+TGG 0.574019 3.2:-2971788 None:intergenic
CGGCGTAACTCGTGGCAGGA+TGG 0.575515 3.2:+2969803 MS.gene058407:CDS
CTTGTTAAAGGTTACAGCAC+CGG 0.575674 3.2:+2973028 MS.gene058407:CDS
GCTCTTTGGAAATTAGTGGA+AGG 0.576494 3.2:-2969917 None:intergenic
CCAGAAAATGTTCTATATTG+CGG 0.576586 3.2:+2974193 MS.gene058407:CDS
AATATCTCGCAGCACAACTC+AGG 0.579985 3.2:+2973459 MS.gene058407:CDS
TGGTGTTCTTATCAATGGGA+AGG 0.580003 3.2:+2971010 MS.gene058407:CDS
AAGAAACACTTACAATAAGT+GGG 0.581952 3.2:+2973432 MS.gene058407:CDS
TTAGGATGGACTATGGCGAT+TGG 0.582570 3.2:+2973398 MS.gene058407:intron
ATTGTCAATCCTGAAGAAGC+GGG 0.584686 3.2:+2974151 MS.gene058407:CDS
CACTACTCAAATTCCAAGGG+TGG 0.584854 3.2:+2971886 MS.gene058407:CDS
AATTTCCAAAGAGCTTCTGG+TGG 0.586760 3.2:+2969926 MS.gene058407:CDS
TTCAAATGCGGCGTAACTCG+TGG 0.587526 3.2:+2969795 MS.gene058407:CDS
ACTATATTGTTGCAAGTGCG+AGG 0.588609 3.2:+2971815 MS.gene058407:CDS
GATTGTCAATCCTGAAGAAG+CGG 0.591474 3.2:+2974150 MS.gene058407:CDS
AACACCAAGAGGAGAAGCAG+TGG 0.595232 3.2:-2968477 None:intergenic
GGTGGAGAGCAGAAAAGAGT+AGG 0.595801 3.2:-2971770 None:intergenic
TTACGCCGCATTTGAACACC+AGG 0.596768 3.2:-2969788 None:intergenic
CTGGTGTCTCTAGACAATGT+TGG 0.597006 3.2:+2974064 MS.gene058407:CDS
TTATCAGTACAATAATACTC+TGG 0.597537 3.2:+2971037 MS.gene058407:CDS
TTACACTACTCAAATTCCAA+GGG 0.598552 3.2:+2971883 MS.gene058407:CDS
GAGCTCGTCCTAACCCTCAA+GGG 0.599281 3.2:+2972967 MS.gene058407:CDS
GAGCAGAAAATTTGGACAGG+TGG 0.600104 3.2:+2974101 MS.gene058407:CDS
AATTTGGACAGGTGGTACCT+AGG 0.611380 3.2:+2974109 MS.gene058407:CDS
TCAGATAAGTTTCTTGACCT+AGG 0.612670 3.2:-2974126 None:intergenic
GGTGTTCTTATCAATGGGAA+GGG 0.615393 3.2:+2971011 MS.gene058407:CDS
GGAGCTCGTCCTAACCCTCA+AGG 0.616297 3.2:+2972966 MS.gene058407:CDS
CCTCAAGGGTCCTTTCGGTA+CGG 0.617590 3.2:+2972981 MS.gene058407:CDS
CTATTGCTGGTAGAAACTGA+AGG 0.617963 3.2:+2971694 MS.gene058407:CDS
GAATGAATCATTATGGCAGA+AGG 0.620430 3.2:+2971843 MS.gene058407:CDS
CTTGATTGAGCCGTACCGAA+AGG 0.621022 3.2:-2972991 None:intergenic
TATTGCTGGTAGAAACTGAA+GGG 0.621251 3.2:+2971695 MS.gene058407:CDS
ATGAAGATCTTCTCATAACA+TGG 0.639852 3.2:+2969476 MS.gene058407:CDS
CAACATTGTCTAGAGACACC+AGG 0.642184 3.2:-2974063 None:intergenic
AGGCTAAACACATCTGCAAG+TGG 0.642227 3.2:+2972945 MS.gene058407:intron
ATTGATAGATCAATCATCAA+CGG 0.647112 3.2:+2973197 MS.gene058407:CDS
GCAGGCCTGGTGTTCAAATG+CGG 0.653874 3.2:+2969783 MS.gene058407:intron
TGTTACTACAAATAATCATG+TGG 0.657556 3.2:+2969429 MS.gene058407:CDS
GTTAAAGGTTACAGCACCGG+TGG 0.660172 3.2:+2973031 MS.gene058407:CDS
AAAGACCTCGGAATACCAGA+TGG 0.667451 3.2:+2970990 MS.gene058407:CDS
TAGGTCAAGAAACTTATCTG+AGG 0.669852 3.2:+2974128 MS.gene058407:CDS
TTGAAAACAGAGCAATGTTG+AGG 0.674788 3.2:-2968400 None:intergenic
TTGGTATACTCAAGACTACA+CGG 0.674976 3.2:+2970036 MS.gene058407:CDS
CTTGACGGTGGAAAAGACCT+CGG 0.676213 3.2:+2970978 MS.gene058407:CDS
GAACACCATCTGGTATTCCG+AGG 0.681409 3.2:-2970995 None:intergenic
CTAAGATCAACACTTGACGG+TGG 0.682768 3.2:+2970966 MS.gene058407:CDS
CCGTACCGAAAGGACCCTTG+AGG 0.699100 3.2:-2972981 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGCTTAAATTAAAAAATTA+GGG - chr3.2:2969159-2969178 None:intergenic 10.0%
!! TTAGCTTAAATTAAAAAATT+AGG - chr3.2:2969160-2969179 None:intergenic 10.0%
!!! TTTCTAATGATTTTAATTTA+GGG + chr3.2:2973527-2973546 MS.gene058407:intron 10.0%
!!! TTTTCTAATGATTTTAATTT+AGG + chr3.2:2973526-2973545 MS.gene058407:intron 10.0%
!! ATACGTTCAAATATAATAAT+CGG - chr3.2:2970746-2970765 None:intergenic 15.0%
!! ATATCATATCATTATTTGTA+CGG - chr3.2:2971175-2971194 None:intergenic 15.0%
!! TACAAAATATTGTTAAATAG+TGG + chr3.2:2972624-2972643 MS.gene058407:intron 15.0%
!! TATAAAATATGGTCAAATAA+TGG + chr3.2:2972283-2972302 MS.gene058407:intron 15.0%
!! TATGTTTGTTTGATAAATAT+AGG + chr3.2:2970941-2970960 MS.gene058407:intron 15.0%
!!! AAAAAGTGTAAATTTGAAAA+AGG + chr3.2:2968990-2969009 MS.gene058407:intron 15.0%
!!! ACTTTTTAAACATATTTGAA+AGG - chr3.2:2968977-2968996 None:intergenic 15.0%
!!! CATTATTTCTTAAGTATTTT+TGG + chr3.2:2972049-2972068 MS.gene058407:intron 15.0%
!!! CTTTTTAAACATATTTGAAA+GGG - chr3.2:2968976-2968995 None:intergenic 15.0%
!!! GAATTACAAATATATTTTTC+AGG + chr3.2:2971598-2971617 MS.gene058407:intron 15.0%
!!! GGATCTTTTTATAATATAAA+AGG + chr3.2:2972070-2972089 MS.gene058407:intron 15.0%
!!! GTGCTTTTTAAAATAAATTA+AGG + chr3.2:2973646-2973665 MS.gene058407:intron 15.0%
!!! TCAAAAATAAAACTTTTAAG+TGG - chr3.2:2970670-2970689 None:intergenic 15.0%
!!! TGTTGATTATGATAATAATA+TGG + chr3.2:2969348-2969367 MS.gene058407:intron 15.0%
!!! TTTTTTGAAAGAAAGAAAAA+AGG - chr3.2:2968598-2968617 None:intergenic 15.0%
!! AAAAATAGACTTGTAACAAA+CGG - chr3.2:2974277-2974296 None:intergenic 20.0%
!! AAATCAAGGATATAAGAAAA+AGG - chr3.2:2971439-2971458 None:intergenic 20.0%
!! AATCAAGGATATAAGAAAAA+GGG - chr3.2:2971438-2971457 None:intergenic 20.0%
!! AATCATTTGAAAAAAACCTA+AGG - chr3.2:2973593-2973612 None:intergenic 20.0%
!! AATTGGACAATAAAAGTTAA+TGG - chr3.2:2971117-2971136 None:intergenic 20.0%
!! ATATAACAATTTACAAGAGT+GGG + chr3.2:2972422-2972441 MS.gene058407:intron 20.0%
!! ATGCTATTCAGTATAAAATA+TGG + chr3.2:2972272-2972291 MS.gene058407:intron 20.0%
!! TAAGATAAAAAAGAAGAGAT+AGG + chr3.2:2969648-2969667 MS.gene058407:intron 20.0%
!!! AAAAAAAGGACTCATTTTTA+TGG - chr3.2:2968651-2968670 None:intergenic 20.0%
!!! AACAAATATCTATTGTTTCT+GGG + chr3.2:2972247-2972266 MS.gene058407:intron 20.0%
!!! AATGATCAATTTTTTTGTGT+TGG + chr3.2:2968814-2968833 MS.gene058407:intron 20.0%
!!! AATTTTTGTTGTGTTTCTTA+TGG + chr3.2:2968930-2968949 MS.gene058407:intron 20.0%
!!! AGGTAATAATAATTCAGTTT+TGG - chr3.2:2972382-2972401 None:intergenic 20.0%
!!! ATTTGTAACAATTGATTTCT+TGG + chr3.2:2973373-2973392 MS.gene058407:intron 20.0%
!!! ATTTTGAATTCGAAAGTTTA+AGG - chr3.2:2971668-2971687 None:intergenic 20.0%
!!! ATTTTTTCTCGTTAATTAGA+TGG + chr3.2:2973674-2973693 MS.gene058407:intron 20.0%
!!! CAAAAAAGTGTTGTTTTTTT+GGG + chr3.2:2968611-2968630 MS.gene058407:intron 20.0%
!!! CAAAATTTTGATTTTTACTG+TGG + chr3.2:2969579-2969598 MS.gene058407:intron 20.0%
!!! TACTGATTTTTACTTGTTAA+AGG + chr3.2:2973016-2973035 MS.gene058407:CDS 20.0%
!!! TATATTTAGTTCTATTGACT+CGG + chr3.2:2972804-2972823 MS.gene058407:intron 20.0%
!!! TCAAAAAAGTGTTGTTTTTT+TGG + chr3.2:2968610-2968629 MS.gene058407:intron 20.0%
!!! TTAACTTTTATTGTCCAATT+TGG + chr3.2:2971117-2971136 MS.gene058407:intron 20.0%
! AAAATAGACTTGTAACAAAC+GGG - chr3.2:2974276-2974295 None:intergenic 25.0%
! AAATAACATACAGAAACCAA+AGG - chr3.2:2969608-2969627 None:intergenic 25.0%
! AAGAAACACTTACAATAAGT+GGG + chr3.2:2973432-2973451 MS.gene058407:CDS 25.0%
! AATACATAAATACCTTTGGA+GGG + chr3.2:2973948-2973967 MS.gene058407:intron 25.0%
! ACCTAATACATAAATACCTT+TGG + chr3.2:2973944-2973963 MS.gene058407:intron 25.0%
! AGCTTCTAAATGAAACATTT+CGG - chr3.2:2971463-2971482 None:intergenic 25.0%
! AGTAATCAATTCCAAACAAT+AGG - chr3.2:2970561-2970580 None:intergenic 25.0%
! AGTGCCATCTAATTAAAAAA+GGG - chr3.2:2973882-2973901 None:intergenic 25.0%
! ATGTAAAAGTTACAAGCATT+TGG + chr3.2:2973910-2973929 MS.gene058407:intron 25.0%
! ATTGATAGATCAATCATCAA+CGG + chr3.2:2973197-2973216 MS.gene058407:CDS 25.0%
! GAAAAAGACTAATACCAAAT+TGG - chr3.2:2971134-2971153 None:intergenic 25.0%
! GAACAAATATCTATTGTTTC+TGG + chr3.2:2972246-2972265 MS.gene058407:intron 25.0%
! GATATAACAATTTACAAGAG+TGG + chr3.2:2972421-2972440 MS.gene058407:intron 25.0%
! GCACAAACAAAATAAAATTG+GGG - chr3.2:2969137-2969156 None:intergenic 25.0%
! GGCACAAACAAAATAAAATT+GGG - chr3.2:2969138-2969157 None:intergenic 25.0%
! TAATACATAAATACCTTTGG+AGG + chr3.2:2973947-2973966 MS.gene058407:intron 25.0%
! TAGTGCCATCTAATTAAAAA+AGG - chr3.2:2973883-2973902 None:intergenic 25.0%
! TATATTATTCAGCAAGTTGT+TGG + chr3.2:2971549-2971568 MS.gene058407:intron 25.0%
! TATGGTTAAATTCTGATTGT+AGG + chr3.2:2969366-2969385 MS.gene058407:intron 25.0%
! TCAAAATCATAATCTATTGC+TGG + chr3.2:2971681-2971700 MS.gene058407:CDS 25.0%
! TGACAACTTCATTAACATAT+TGG + chr3.2:2972514-2972533 MS.gene058407:intron 25.0%
! TGATAACAAATTTCCTTGTA+AGG + chr3.2:2972490-2972509 MS.gene058407:intron 25.0%
! TGCAAGTATATGAATAACAA+TGG - chr3.2:2969733-2969752 None:intergenic 25.0%
! TGGAGTGTAAAATATAAATG+TGG + chr3.2:2972749-2972768 MS.gene058407:intron 25.0%
! TGTAGGTTATAGCTATAAAT+GGG + chr3.2:2969383-2969402 MS.gene058407:intron 25.0%
! TGTTACTACAAATAATCATG+TGG + chr3.2:2969429-2969448 MS.gene058407:CDS 25.0%
! TTATCAGTACAATAATACTC+TGG + chr3.2:2971037-2971056 MS.gene058407:CDS 25.0%
! TTGTAGGTTATAGCTATAAA+TGG + chr3.2:2969382-2969401 MS.gene058407:intron 25.0%
! TTGTTATAAAAATCATCTGG+TGG - chr3.2:2971934-2971953 None:intergenic 25.0%
! TTTGTAGTAACATTAATCAC+AGG - chr3.2:2969421-2969440 None:intergenic 25.0%
!! ACAATTGATTTCTTGGATTT+AGG + chr3.2:2973380-2973399 MS.gene058407:intron 25.0%
!! ACCAGATGATTTTTATAACA+AGG + chr3.2:2971933-2971952 MS.gene058407:CDS 25.0%
!! AGAGTATTATTGTACTGATA+AGG - chr3.2:2971038-2971057 None:intergenic 25.0%
!! CCAGATGATTTTTATAACAA+GGG + chr3.2:2971934-2971953 MS.gene058407:CDS 25.0%
!! GGTGAAATTTTCATTATGAT+TGG + chr3.2:2970010-2970029 MS.gene058407:CDS 25.0%
!! GTAAGTGTTTCTTGAATTTT+CGG - chr3.2:2973425-2973444 None:intergenic 25.0%
!! GTCTATTTTACCAATATAAC+AGG + chr3.2:2974015-2974034 MS.gene058407:intron 25.0%
!!! GTATGTTATTTTGAAATGTG+TGG + chr3.2:2969617-2969636 MS.gene058407:intron 25.0%
!!! TCCAAAGGTATTTATGTATT+AGG - chr3.2:2973948-2973967 None:intergenic 25.0%
!!! TTAAGCTTGTTTTTTCATCT+GGG + chr3.2:2968545-2968564 MS.gene058407:intron 25.0%
!!! TTTAAGCTTGTTTTTTCATC+TGG + chr3.2:2968544-2968563 MS.gene058407:intron 25.0%
!!! TTTTCATTATGATTGGTGAT+TGG + chr3.2:2970017-2970036 MS.gene058407:CDS 25.0%
AAATTACTTTACAGAGAGTG+AGG - chr3.2:2971296-2971315 None:intergenic 30.0%
AAATTTACAGCATAGTCACA+TGG - chr3.2:2970878-2970897 None:intergenic 30.0%
AACACATACTATGTCACATT+TGG + chr3.2:2969679-2969698 MS.gene058407:intron 30.0%
AATAATACTCTGGTACCTAA+TGG + chr3.2:2971047-2971066 MS.gene058407:CDS 30.0%
ACAAAAAAATCTCATCTCAG+AGG - chr3.2:2970252-2970271 None:intergenic 30.0%
ACAAGCTTAAAAGAACGAAA+TGG - chr3.2:2968535-2968554 None:intergenic 30.0%
ACCAGTGGAAAAATTGAAAA+TGG - chr3.2:2971244-2971263 None:intergenic 30.0%
ATAATACTCTGGTACCTAAT+GGG + chr3.2:2971048-2971067 MS.gene058407:CDS 30.0%
ATAATGAAAATTTCACCGTC+GGG - chr3.2:2970007-2970026 None:intergenic 30.0%
ATCATCAACGGTACATATAA+AGG + chr3.2:2973209-2973228 MS.gene058407:CDS 30.0%
ATGAAGATCTTCTCATAACA+TGG + chr3.2:2969476-2969495 MS.gene058407:CDS 30.0%
ATGATTGATCTATCAATCAC+TGG - chr3.2:2973194-2973213 None:intergenic 30.0%
CAAGAAACACTTACAATAAG+TGG + chr3.2:2973431-2973450 MS.gene058407:CDS 30.0%
CAGCAGAAACAAACAAAAAA+AGG - chr3.2:2968665-2968684 None:intergenic 30.0%
CATAATGAAAATTTCACCGT+CGG - chr3.2:2970008-2970027 None:intergenic 30.0%
CATATAACAAAGTGAAACAG+AGG - chr3.2:2968780-2968799 None:intergenic 30.0%
CCAGAAAATGTTCTATATTG+CGG + chr3.2:2974193-2974212 MS.gene058407:CDS 30.0%
CCAGTGGAAAAATTGAAAAT+GGG - chr3.2:2971243-2971262 None:intergenic 30.0%
GAGTTGTGCTAAAAAGATTA+TGG + chr3.2:2972773-2972792 MS.gene058407:intron 30.0%
GCTGACTATATCATATAGAA+TGG + chr3.2:2971480-2971499 MS.gene058407:intron 30.0%
GGGCACAAACAAAATAAAAT+TGG - chr3.2:2969139-2969158 None:intergenic 30.0%
GGTTTGTGAATGAATCATTA+TGG + chr3.2:2971836-2971855 MS.gene058407:CDS 30.0%
GTTGAGATTGTATGTGTAAA+TGG + chr3.2:2968849-2968868 MS.gene058407:intron 30.0%
TACAGAACTTGAAAATTCCA+TGG - chr3.2:2970313-2970332 None:intergenic 30.0%
TAGGAAAAGAACCTATTGTT+TGG + chr3.2:2970547-2970566 MS.gene058407:intron 30.0%
TAGTAAGAAGAGAAAGTGAA+AGG - chr3.2:2973329-2973348 None:intergenic 30.0%
TAGTTGAAATTCCCACATTA+TGG - chr3.2:2971645-2971664 None:intergenic 30.0%
TCAAGCTATCAATAAAGTGA+CGG - chr3.2:2970345-2970364 None:intergenic 30.0%
TCACTTAAAAATCCTTCTTG+CGG + chr3.2:2970604-2970623 MS.gene058407:intron 30.0%
TCATCAACGGTACATATAAA+GGG + chr3.2:2973210-2973229 MS.gene058407:CDS 30.0%
TGAAACATTTCGGAAAATCA+AGG - chr3.2:2971453-2971472 None:intergenic 30.0%
TGGTCAAATAATGGCTATAT+CGG + chr3.2:2972292-2972311 MS.gene058407:intron 30.0%
TGTAACAAAAGCAGAGTTAA+TGG - chr3.2:2970422-2970441 None:intergenic 30.0%
TTAAATAGGCAACGAAATAG+CGG + chr3.2:2972578-2972597 MS.gene058407:intron 30.0%
TTAATGGCGATAAAAATACC+TGG - chr3.2:2971101-2971120 None:intergenic 30.0%
TTACACTACTCAAATTCCAA+GGG + chr3.2:2971883-2971902 MS.gene058407:CDS 30.0%
TTAGTTGATTAACCTCACAA+GGG - chr3.2:2972460-2972479 None:intergenic 30.0%
TTATAAAAATCATCTGGTGG+TGG - chr3.2:2971931-2971950 None:intergenic 30.0%
TTATTTGTACGGCATGAAAA+TGG - chr3.2:2971164-2971183 None:intergenic 30.0%
TTCAAGTGAAGGATCAAATA+GGG + chr3.2:2969879-2969898 MS.gene058407:CDS 30.0%
TTCAGTGACACTAAGTAAAT+GGG - chr3.2:2970447-2970466 None:intergenic 30.0%
TTGAAGATGAAGGGTAATTT+GGG + chr3.2:2970361-2970380 MS.gene058407:intron 30.0%
TTGATTTCTTGGATTTAGGA+TGG + chr3.2:2973384-2973403 MS.gene058407:intron 30.0%
TTTACACTACTCAAATTCCA+AGG + chr3.2:2971882-2971901 MS.gene058407:CDS 30.0%
TTTACTAAGGACATGTTTCA+TGG + chr3.2:2973554-2973573 MS.gene058407:intron 30.0%
! ATAACTCTAAAAGTAGTCTG+TGG - chr3.2:2971532-2971551 None:intergenic 30.0%
! ATTGATAGCTTGAAGATGAA+GGG + chr3.2:2970352-2970371 MS.gene058407:intron 30.0%
! CCCTTGTTATAAAAATCATC+TGG - chr3.2:2971937-2971956 None:intergenic 30.0%
! TATTGATAGCTTGAAGATGA+AGG + chr3.2:2970351-2970370 MS.gene058407:intron 30.0%
! TCCCTTTGTTATCAACAATA+GGG + chr3.2:2969955-2969974 MS.gene058407:CDS 30.0%
! TCTAAGTTAAGTGCAGTTTT+AGG + chr3.2:2972125-2972144 MS.gene058407:intron 30.0%
! TGAGAAAAAATGTTTGTTGC+AGG + chr3.2:2969765-2969784 MS.gene058407:intron 30.0%
! TTGATCAAACTGCAATTTTC+TGG + chr3.2:2972344-2972363 MS.gene058407:intron 30.0%
! TTTCAAGTGAAGGATCAAAT+AGG + chr3.2:2969878-2969897 MS.gene058407:CDS 30.0%
!! ACTTTTGTTTGTATTGGAGA+GGG - chr3.2:2974219-2974238 None:intergenic 30.0%
!! ATTAACTCTGCTTTTGTTAC+AGG + chr3.2:2970421-2970440 MS.gene058407:intron 30.0%
!! TACTTTTGTTTGTATTGGAG+AGG - chr3.2:2974220-2974239 None:intergenic 30.0%
!! TCCCTATTGTTGATAACAAA+GGG - chr3.2:2969959-2969978 None:intergenic 30.0%
!! TTGATTCTGAGGTTGAAAAA+GGG + chr3.2:2968873-2968892 MS.gene058407:intron 30.0%
!! TTTGATTCTGAGGTTGAAAA+AGG + chr3.2:2968872-2968891 MS.gene058407:intron 30.0%
!! TTTTCAACACTCTGTTTTTC+TGG + chr3.2:2968416-2968435 MS.gene058407:CDS 30.0%
!!! CAATTTTTCCACTGGTTTAT+TGG + chr3.2:2971248-2971267 MS.gene058407:intron 30.0%
!!! GACGTTACTTTTGTTTGTAT+TGG - chr3.2:2974225-2974244 None:intergenic 30.0%
!!! GTTGCCCTTTTTTAATTAGA+TGG + chr3.2:2973875-2973894 MS.gene058407:intron 30.0%
!!! TGGTTTTAAAAGAGTTCCTT+AGG + chr3.2:2973574-2973593 MS.gene058407:intron 30.0%
AAAAAAAAACCACCGCAAGA+AGG - chr3.2:2970619-2970638 None:intergenic 35.0%
AACTCAAACCAATAAACCAG+TGG - chr3.2:2971259-2971278 None:intergenic 35.0%
ACATACTATGTCACATTTGG+TGG + chr3.2:2969682-2969701 MS.gene058407:intron 35.0%
ACCAACTTTGATATTCATGC+TGG + chr3.2:2971742-2971761 MS.gene058407:CDS 35.0%
ACTAATTTCCAAAGAGCTTC+TGG + chr3.2:2969923-2969942 MS.gene058407:CDS 35.0%
AGTGAATGTGTATAATCAGC+TGG + chr3.2:2969453-2969472 MS.gene058407:CDS 35.0%
ATCACCATTGAAATCACACA+AGG - chr3.2:2969084-2969103 None:intergenic 35.0%
ATGAAGTTGTCAACCTTACA+AGG - chr3.2:2972506-2972525 None:intergenic 35.0%
ATTCAGCAAGTTGTTGGAAT+TGG + chr3.2:2971555-2971574 MS.gene058407:intron 35.0%
ATTGTCCAATTCCTTCGAAA+TGG + chr3.2:2969840-2969859 MS.gene058407:CDS 35.0%
CAATTCCATTTCGAAGGAAT+TGG - chr3.2:2969848-2969867 None:intergenic 35.0%
CAATTCCTTCGAAATGGAAT+TGG + chr3.2:2969846-2969865 MS.gene058407:CDS 35.0%
CAGATGGTGTTCTTATCAAT+GGG + chr3.2:2971006-2971025 MS.gene058407:CDS 35.0%
CCAGGAAAAACCTGTTATAT+TGG - chr3.2:2974028-2974047 None:intergenic 35.0%
CTAATTAAAAAAGGGCAACC+CGG - chr3.2:2973874-2973893 None:intergenic 35.0%
CTTAGAATCTGATGTCATAG+AGG + chr3.2:2971995-2972014 MS.gene058407:intron 35.0%
CTTCAGTGACACTAAGTAAA+TGG - chr3.2:2970448-2970467 None:intergenic 35.0%
CTTGAAGATGAAGGGTAATT+TGG + chr3.2:2970360-2970379 MS.gene058407:intron 35.0%
GAAACAATTACTGTTGATCC+AGG + chr3.2:2971080-2971099 MS.gene058407:CDS 35.0%
GAAACATGTCCTTAGTAAAC+AGG - chr3.2:2973553-2973572 None:intergenic 35.0%
GAAATGAACGAGTATAGGAA+AGG + chr3.2:2970476-2970495 MS.gene058407:intron 35.0%
GAACCAATTCGTAAAAGAAC+CGG - chr3.2:2970160-2970179 None:intergenic 35.0%
GAATCTGAGAGCAGAAAATT+TGG + chr3.2:2974093-2974112 MS.gene058407:CDS 35.0%
GAATGAATCATTATGGCAGA+AGG + chr3.2:2971843-2971862 MS.gene058407:CDS 35.0%
GCTATAAATGGGAAATTTCC+TGG + chr3.2:2969394-2969413 MS.gene058407:CDS 35.0%
GGAAAAATTGAAAATGGGTG+TGG - chr3.2:2971238-2971257 None:intergenic 35.0%
GGAATCAGAAAAGCAAAGAA+GGG - chr3.2:2968514-2968533 None:intergenic 35.0%
GTGTAAATGGTTTGATTCTG+AGG + chr3.2:2968862-2968881 MS.gene058407:intron 35.0%
GTTAGTTGATTAACCTCACA+AGG - chr3.2:2972461-2972480 None:intergenic 35.0%
GTTTCATGATCTATCCCATT+AGG - chr3.2:2971065-2971084 None:intergenic 35.0%
TAAGAATTCGCACCTGAATT+CGG + chr3.2:2970181-2970200 MS.gene058407:intron 35.0%
TAATTAGATGGCACTACTGA+GGG + chr3.2:2973686-2973705 MS.gene058407:intron 35.0%
TAGGTCAAGAAACTTATCTG+AGG + chr3.2:2974128-2974147 MS.gene058407:CDS 35.0%
TAGTACCACTTGAGTTACAT+AGG + chr3.2:2970528-2970547 MS.gene058407:intron 35.0%
TATTGCTGGTAGAAACTGAA+GGG + chr3.2:2971695-2971714 MS.gene058407:CDS 35.0%
TCACCATTGAAATCACACAA+GGG - chr3.2:2969083-2969102 None:intergenic 35.0%
TCAGATAAGTTTCTTGACCT+AGG - chr3.2:2974129-2974148 None:intergenic 35.0%
TCATAGAGGATTATATCGCA+TGG + chr3.2:2972009-2972028 MS.gene058407:intron 35.0%
TCCAAAACTTTCATCTGGAT+GGG + chr3.2:2973270-2973289 MS.gene058407:CDS 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr3.2:2973782-2973801 MS.gene058407:intron 35.0%
TGAAGATGAAGGGTAATTTG+GGG + chr3.2:2970362-2970381 MS.gene058407:intron 35.0%
TGAAGTTCTGTGTAAACAGT+TGG - chr3.2:2968446-2968465 None:intergenic 35.0%
TGATAACAAATTCCCTTGTG+AGG + chr3.2:2972445-2972464 MS.gene058407:intron 35.0%
TGGAATCAGAAAAGCAAAGA+AGG - chr3.2:2968515-2968534 None:intergenic 35.0%
TGTCAAAAAATTCGGTACGT+GGG - chr3.2:2970804-2970823 None:intergenic 35.0%
TTAATTAGATGGCACTACTG+AGG + chr3.2:2973685-2973704 MS.gene058407:intron 35.0%
TTATATCCGTAACGCAAAGT+AGG - chr3.2:2972408-2972427 None:intergenic 35.0%
TTCAGGAAATGAACGAGTAT+AGG + chr3.2:2970471-2970490 MS.gene058407:intron 35.0%
TTCGCGACTGTCAAAAAATT+CGG - chr3.2:2970812-2970831 None:intergenic 35.0%
TTCTTACCCAACAACGAAAA+AGG - chr3.2:2973300-2973319 None:intergenic 35.0%
TTGAAAACAGAGCAATGTTG+AGG - chr3.2:2968403-2968422 None:intergenic 35.0%
TTGGTATACTCAAGACTACA+CGG + chr3.2:2970036-2970055 MS.gene058407:CDS 35.0%
TTGTAAAATACTCCCTCCAA+AGG - chr3.2:2973963-2973982 None:intergenic 35.0%
TTGTCAGTCGCATAAAATAG+CGG - chr3.2:2972688-2972707 None:intergenic 35.0%
TTTAACAACACTGCTGCAAA+AGG - chr3.2:2972563-2972582 None:intergenic 35.0%
TTTACATCATGATGCTGAGT+AGG + chr3.2:2972925-2972944 MS.gene058407:intron 35.0%
! AAACGAGTATCTCTTTTGAG+TGG + chr3.2:2974374-2974393 MS.gene058407:intron 35.0%
! AATTTAGGGCCTGTTTACTA+AGG + chr3.2:2973541-2973560 MS.gene058407:intron 35.0%
! AGAAGCTCTTTGGAAATTAG+TGG - chr3.2:2969924-2969943 None:intergenic 35.0%
! ATTTTTACTGTGGTGTCCTT+TGG + chr3.2:2969589-2969608 MS.gene058407:intron 35.0%
! CCAATATAACAGGTTTTTCC+TGG + chr3.2:2974025-2974044 MS.gene058407:intron 35.0%
! CCCATTTTCAATTTTTCCAC+TGG + chr3.2:2971240-2971259 MS.gene058407:intron 35.0%
! CCGCAATATAGAACATTTTC+TGG - chr3.2:2974196-2974215 None:intergenic 35.0%
! CTCTTTGGAAATTAGTGGAA+GGG - chr3.2:2969919-2969938 None:intergenic 35.0%
! CTTTTCCTATGTAACTCAAG+TGG - chr3.2:2970536-2970555 None:intergenic 35.0%
! GTCCCTTTGTTATCAACAAT+AGG + chr3.2:2969954-2969973 MS.gene058407:CDS 35.0%
! GTTTGTGATTTTGTGACTGA+TGG + chr3.2:2969048-2969067 MS.gene058407:intron 35.0%
! TAGACTATAGTTCTATAGCG+TGG + chr3.2:2972215-2972234 MS.gene058407:intron 35.0%
! TTCCTTTTCACATTGCTCAT+GGG + chr3.2:2974614-2974633 MS.gene058407:CDS 35.0%
! TTGCAGCAGTGTTGTTAAAT+AGG + chr3.2:2972564-2972583 MS.gene058407:intron 35.0%
! TTTCCGGTTCTTTTACGAAT+TGG + chr3.2:2970154-2970173 MS.gene058407:intron 35.0%
! TTTGATGGCACATAGTGTTT+GGG + chr3.2:2970500-2970519 MS.gene058407:intron 35.0%
!! AAAAGCAGAGTTAATGGACT+CGG - chr3.2:2970416-2970435 None:intergenic 35.0%
!! CAAACCTGATACTTTTTGCT+TGG - chr3.2:2971972-2971991 None:intergenic 35.0%
!! CTCCCTATTGTTGATAACAA+AGG - chr3.2:2969960-2969979 None:intergenic 35.0%
!! GAGTATAGGAAAGGTTTTGA+TGG + chr3.2:2970485-2970504 MS.gene058407:intron 35.0%
!! TATTGACTCGGAATGATCAA+GGG + chr3.2:2972816-2972835 MS.gene058407:intron 35.0%
!! TGAACCAAGCAAAAAGTATC+AGG + chr3.2:2971965-2971984 MS.gene058407:CDS 35.0%
!! TTGTTTGTTTCTGCTGAAAG+TGG + chr3.2:2968669-2968688 MS.gene058407:intron 35.0%
!! TTTTGATGGCACATAGTGTT+TGG + chr3.2:2970499-2970518 MS.gene058407:intron 35.0%
!!! GGGTAATTTGGGGTTTTAAA+AGG + chr3.2:2970372-2970391 MS.gene058407:intron 35.0%
!!! TAATTCAGTTTTGGCTAACG+CGG - chr3.2:2972373-2972392 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr3.2:2973783-2973802 None:intergenic 35.0%
AATTAGATGGCACTACTGAG+GGG + chr3.2:2973687-2973706 MS.gene058407:intron 40.0%
AATTTCCAAAGAGCTTCTGG+TGG + chr3.2:2969926-2969945 MS.gene058407:CDS 40.0%
ACAACTCGAGCTGCAATTAA+CGG + chr3.2:2973065-2973084 MS.gene058407:CDS 40.0%
ACTATATTGTTGCAAGTGCG+AGG + chr3.2:2971815-2971834 MS.gene058407:CDS 40.0%
ACTGCCTCTTGTGTAAAAAC+AGG + chr3.2:2973776-2973795 MS.gene058407:intron 40.0%
AGAGGTTAGAATGCAGTTCA+TGG - chr3.2:2970234-2970253 None:intergenic 40.0%
AGTTAAGTGACAACTCACGT+TGG + chr3.2:2972722-2972741 MS.gene058407:intron 40.0%
ATCACTGGTGTTCTGTTCAT+CGG - chr3.2:2973179-2973198 None:intergenic 40.0%
ATTGTCAATCCTGAAGAAGC+GGG + chr3.2:2974151-2974170 MS.gene058407:CDS 40.0%
ATTGTTTGCGAATGTCAGTG+AGG + chr3.2:2972159-2972178 MS.gene058407:intron 40.0%
CATGTTAGCAAGCTTATGCA+TGG + chr3.2:2973617-2973636 MS.gene058407:intron 40.0%
CCACATTATGGACACGAATT+CGG - chr3.2:2971633-2971652 None:intergenic 40.0%
CCAGATGGTGTTCTTATCAA+TGG + chr3.2:2971005-2971024 MS.gene058407:CDS 40.0%
CCATTGATAAGAACACCATC+TGG - chr3.2:2971008-2971027 None:intergenic 40.0%
CCTATACCTACTTTGCGTTA+CGG + chr3.2:2972399-2972418 MS.gene058407:intron 40.0%
CGAATTCGTGTCCATAATGT+GGG + chr3.2:2971631-2971650 MS.gene058407:CDS 40.0%
CGTACAATACACCAAATGGT+GGG + chr3.2:2973808-2973827 MS.gene058407:intron 40.0%
CTATTGCTGGTAGAAACTGA+AGG + chr3.2:2971694-2971713 MS.gene058407:CDS 40.0%
CTCTAGACAATGTTGGATCA+TGG + chr3.2:2974071-2974090 MS.gene058407:CDS 40.0%
CTCTGTCCAAAACTTTCATC+TGG + chr3.2:2973265-2973284 MS.gene058407:CDS 40.0%
CTGCCTCTTGTGTAAAAACA+GGG + chr3.2:2973777-2973796 MS.gene058407:intron 40.0%
CTGTCAAAAAATTCGGTACG+TGG - chr3.2:2970805-2970824 None:intergenic 40.0%
CTTAAAAATCCTTCTTGCGG+TGG + chr3.2:2970607-2970626 MS.gene058407:intron 40.0%
CTTGTTAAAGGTTACAGCAC+CGG + chr3.2:2973028-2973047 MS.gene058407:CDS 40.0%
GAGGTTAGAATGCAGTTCAT+GGG - chr3.2:2970233-2970252 None:intergenic 40.0%
GATTGTCAATCCTGAAGAAG+CGG + chr3.2:2974150-2974169 MS.gene058407:CDS 40.0%
GCCAGCATGAATATCAAAGT+TGG - chr3.2:2971746-2971765 None:intergenic 40.0%
GGAACAGTTTGAATTCTGAC+TGG + chr3.2:2971576-2971595 MS.gene058407:intron 40.0%
GGGTACAAAAACACTGTCAA+TGG - chr3.2:2974256-2974275 None:intergenic 40.0%
GGTGTTCTTATCAATGGGAA+GGG + chr3.2:2971011-2971030 MS.gene058407:CDS 40.0%
GTAACATTAATCACAGGTCC+AGG - chr3.2:2969415-2969434 None:intergenic 40.0%
GTCAAAAAATTCGGTACGTG+GGG - chr3.2:2970803-2970822 None:intergenic 40.0%
GTCCAAAACTTTCATCTGGA+TGG + chr3.2:2973269-2973288 MS.gene058407:CDS 40.0%
GTTGTTGTCATGTGACTGTA+AGG + chr3.2:2973732-2973751 MS.gene058407:intron 40.0%
TAAAACCTGACGTTCCGTTT+CGG + chr3.2:2973099-2973118 MS.gene058407:CDS 40.0%
TACAGCATAGTCACATGGTT+CGG - chr3.2:2970873-2970892 None:intergenic 40.0%
TACGTCCAATTCCATTTCGA+AGG - chr3.2:2969854-2969873 None:intergenic 40.0%
TCAAAAAATTCGGTACGTGG+GGG - chr3.2:2970802-2970821 None:intergenic 40.0%
TCAATAAAGTGACGGCAGAA+AGG - chr3.2:2970337-2970356 None:intergenic 40.0%
TCATTATGGCAGAAGGTTAC+AGG + chr3.2:2971850-2971869 MS.gene058407:CDS 40.0%
TGAGAGCAGAAAATTTGGAC+AGG + chr3.2:2974098-2974117 MS.gene058407:CDS 40.0%
TGATGTTCTCACAGAAAGCA+CGG - chr3.2:2971386-2971405 None:intergenic 40.0%
TGGTGTTCTTATCAATGGGA+AGG + chr3.2:2971010-2971029 MS.gene058407:CDS 40.0%
TGTACACTGTATGTAGGCAT+TGG - chr3.2:2971215-2971234 None:intergenic 40.0%
TTCCCATGAGCAATGTGAAA+AGG - chr3.2:2974619-2974638 None:intergenic 40.0%
TTCGTAAAAGAACCGGAAAC+CGG - chr3.2:2970153-2970172 None:intergenic 40.0%
TTTGGTACGTGGTACGAATT+CGG - chr3.2:2970843-2970862 None:intergenic 40.0%
! AAAAATGTTTGTTGCAGGCC+TGG + chr3.2:2969770-2969789 MS.gene058407:intron 40.0%
! ACCCATCCAGATGAAAGTTT+TGG - chr3.2:2973274-2973293 None:intergenic 40.0%
! CTTCCTTTTCACATTGCTCA+TGG + chr3.2:2974613-2974632 MS.gene058407:CDS 40.0%
! GACGTATCAGTTTCAAGTGA+AGG + chr3.2:2969868-2969887 MS.gene058407:CDS 40.0%
! GCAGATTCTACTTTGAGAAG+TGG + chr3.2:2974590-2974609 MS.gene058407:CDS 40.0%
! GCTCTTTGGAAATTAGTGGA+AGG - chr3.2:2969920-2969939 None:intergenic 40.0%
! GTTGGTGTAATTTGCCTGAT+CGG - chr3.2:2971728-2971747 None:intergenic 40.0%
! TAGTGTCACTGAAGAGTTTC+AGG + chr3.2:2970454-2970473 MS.gene058407:intron 40.0%
! TATATCGGAGCGCTATAGTA+TGG + chr3.2:2972307-2972326 MS.gene058407:intron 40.0%
! TGTGATTTTGTGACTGATGG+TGG + chr3.2:2969051-2969070 MS.gene058407:intron 40.0%
!! AAAGCAGAGTTAATGGACTC+GGG - chr3.2:2970415-2970434 None:intergenic 40.0%
!! CTATTGACTCGGAATGATCA+AGG + chr3.2:2972815-2972834 MS.gene058407:intron 40.0%
!! CTTGGATTTAGGATGGACTA+TGG + chr3.2:2973391-2973410 MS.gene058407:intron 40.0%
!! GCTCTAAGATCAACACTTGA+CGG + chr3.2:2970963-2970982 MS.gene058407:CDS 40.0%
!! GGTACTCCTTTTTCGTTGTT+GGG + chr3.2:2973291-2973310 MS.gene058407:CDS 40.0%
!! TAAAAATCATCTGGTGGTGG+TGG - chr3.2:2971928-2971947 None:intergenic 40.0%
!! TATAGTTTTGCCACCTACTG+CGG + chr3.2:2969264-2969283 MS.gene058407:intron 40.0%
!! TCATCTGGGTCGTTTTCTTT+TGG + chr3.2:2968559-2968578 MS.gene058407:intron 40.0%
!! TTTGTGACTGATGGTGGAAT+TGG + chr3.2:2969057-2969076 MS.gene058407:intron 40.0%
!!! CAGATGAAAGTTTTGGACAG+AGG - chr3.2:2973267-2973286 None:intergenic 40.0%
AAAGACCTCGGAATACCAGA+TGG + chr3.2:2970990-2971009 MS.gene058407:CDS 45.0%
AATATCTCGCAGCACAACTC+AGG + chr3.2:2973459-2973478 MS.gene058407:CDS 45.0%
AATTTGGACAGGTGGTACCT+AGG + chr3.2:2974109-2974128 MS.gene058407:CDS 45.0%
ACATAATTCGTCCATCCTCC+TGG + chr3.2:2970103-2970122 MS.gene058407:intron 45.0%
AGAGCAGAAAAGAGTAGGAC+TGG - chr3.2:2971768-2971787 None:intergenic 45.0%
AGGCTAAACACATCTGCAAG+TGG + chr3.2:2972945-2972964 MS.gene058407:intron 45.0%
AGTAGTCTGTACTTGCGTTC+TGG - chr3.2:2971798-2971817 None:intergenic 45.0%
ATTCCGATTCATACCGCAGT+AGG - chr3.2:2969280-2969299 None:intergenic 45.0%
CAAAAAATTCGGTACGTGGG+GGG - chr3.2:2970801-2970820 None:intergenic 45.0%
CAAATCCACCAGAAGCTCTT+TGG - chr3.2:2969934-2969953 None:intergenic 45.0%
CAACATTGTCTAGAGACACC+AGG - chr3.2:2974066-2974085 None:intergenic 45.0%
CACTACTCAAATTCCAAGGG+TGG + chr3.2:2971886-2971905 MS.gene058407:CDS 45.0%
CATAATTCGTCCATCCTCCT+GGG + chr3.2:2970104-2970123 MS.gene058407:intron 45.0%
CCGAATTCGTGTCCATAATG+TGG + chr3.2:2971630-2971649 MS.gene058407:CDS 45.0%
CCGTAACGCAAAGTAGGTAT+AGG - chr3.2:2972402-2972421 None:intergenic 45.0%
CTAAGATCAACACTTGACGG+TGG + chr3.2:2970966-2970985 MS.gene058407:CDS 45.0%
CTGGTGTCTCTAGACAATGT+TGG + chr3.2:2974064-2974083 MS.gene058407:CDS 45.0%
GAGCAGAAAATTTGGACAGG+TGG + chr3.2:2974101-2974120 MS.gene058407:CDS 45.0%
GCATATTAGCCAGCTGACAA+GGG - chr3.2:2972898-2972917 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr3.2:2973807-2973826 MS.gene058407:intron 45.0%
GCTATAGTATGGCTGCATAG+CGG + chr3.2:2972318-2972337 MS.gene058407:intron 45.0%
GCTGACAACAATCAGCTAAG+AGG + chr3.2:2973125-2973144 MS.gene058407:CDS 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3.2:2973804-2973823 MS.gene058407:intron 45.0%
GTCATGTGACTGTAAGGTCA+CGG + chr3.2:2973738-2973757 MS.gene058407:intron 45.0%
GTGTGGTGTACACTGTATGT+AGG - chr3.2:2971221-2971240 None:intergenic 45.0%
GTTAGCAAGCTTATGCATGG+AGG + chr3.2:2973620-2973639 MS.gene058407:intron 45.0%
TAGAATGCAGTTCATGGGCA+TGG - chr3.2:2970228-2970247 None:intergenic 45.0%
TCATGTGACTGTAAGGTCAC+GGG + chr3.2:2973739-2973758 MS.gene058407:intron 45.0%
TGCATATTAGCCAGCTGACA+AGG - chr3.2:2972899-2972918 None:intergenic 45.0%
TGGCCCTTGTGTGATTTCAA+TGG + chr3.2:2969077-2969096 MS.gene058407:intron 45.0%
TTACACAAGAGGCAGTTTCC+AGG - chr3.2:2973772-2973791 None:intergenic 45.0%
TTGGTACGTGGTACGAATTC+GGG - chr3.2:2970842-2970861 None:intergenic 45.0%
TTGTTGTCAGCAAGCCGAAA+CGG - chr3.2:2973116-2973135 None:intergenic 45.0%
! AACAGGTTTTTCCTGGAGCA+TGG + chr3.2:2974032-2974051 MS.gene058407:intron 45.0%
! ACAGAGTCGGTTCACTGTTT+GGG - chr3.2:2970775-2970794 None:intergenic 45.0%
! ACATGGTTCGGAATTCGCTT+TGG - chr3.2:2970861-2970880 None:intergenic 45.0%
! AGCAAAGAAGGGACCTTTTG+AGG - chr3.2:2968503-2968522 None:intergenic 45.0%
! TACAGAGTCGGTTCACTGTT+TGG - chr3.2:2970776-2970795 None:intergenic 45.0%
! TGACAACTCACGTTGGTTGA+TGG + chr3.2:2972729-2972748 MS.gene058407:intron 45.0%
! TGATGTTTTCCCTTGTCAGC+TGG + chr3.2:2972886-2972905 MS.gene058407:intron 45.0%
!! ACCTTTTGAGGAACACCAAG+AGG - chr3.2:2968491-2968510 None:intergenic 45.0%
!! AGAGTTAATGGACTCGGGTT+AGG - chr3.2:2970410-2970429 None:intergenic 45.0%
!! CAAAGAGCTTCTGGTGGATT+TGG + chr3.2:2969932-2969951 MS.gene058407:CDS 45.0%
!! GAGTTAATGGACTCGGGTTA+GGG - chr3.2:2970409-2970428 None:intergenic 45.0%
!! GGGTACTCCTTTTTCGTTGT+TGG + chr3.2:2973290-2973309 MS.gene058407:CDS 45.0%
!! TCCTCTTGGTGTTCCTCAAA+AGG + chr3.2:2968487-2968506 MS.gene058407:CDS 45.0%
!! TGAAGGGTATTACACCGATC+AGG + chr3.2:2971711-2971730 MS.gene058407:CDS 45.0%
!! TTAGGATGGACTATGGCGAT+TGG + chr3.2:2973398-2973417 MS.gene058407:intron 45.0%
!! AAAAAAATCTATTTATTTAT+TGG + chr3.2:2970691-2970710 MS.gene058407:intron 5.0%
!! AATATATAATAAAATGAAAT+AGG - chr3.2:2972099-2972118 None:intergenic 5.0%
!!! GATTATAAATTAAATTTTAA+AGG + chr3.2:2969238-2969257 MS.gene058407:intron 5.0%
AACACCAAGAGGAGAAGCAG+TGG - chr3.2:2968480-2968499 None:intergenic 50.0%
AGTTCATGGGCATGGTTCAC+TGG - chr3.2:2970220-2970239 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr3.2:2973716-2973735 None:intergenic 50.0%
CCACCTACTGCGGTATGAAT+CGG + chr3.2:2969274-2969293 MS.gene058407:intron 50.0%
CCATGGCATCTTGCAGAAAC+AGG - chr3.2:2970296-2970315 None:intergenic 50.0%
CTAACCCTCAAGGGTCCTTT+CGG + chr3.2:2972976-2972995 MS.gene058407:CDS 50.0%
CTTGACGGTGGAAAAGACCT+CGG + chr3.2:2970978-2970997 MS.gene058407:CDS 50.0%
CTTGATTGAGCCGTACCGAA+AGG - chr3.2:2972994-2973013 None:intergenic 50.0%
GAACACCATCTGGTATTCCG+AGG - chr3.2:2970998-2971017 None:intergenic 50.0%
GGTGGAGAGCAGAAAAGAGT+AGG - chr3.2:2971773-2971792 None:intergenic 50.0%
GTCTGTACTTGCGTTCTGGT+CGG - chr3.2:2971794-2971813 None:intergenic 50.0%
TCGGAATTCGCTTTGGTACG+TGG - chr3.2:2970854-2970873 None:intergenic 50.0%
TTACGCCGCATTTGAACACC+AGG - chr3.2:2969791-2969810 None:intergenic 50.0%
TTCAAATGCGGCGTAACTCG+TGG + chr3.2:2969795-2969814 MS.gene058407:CDS 50.0%
! AATTCCAAGGGTGGAGCATC+TGG + chr3.2:2971895-2971914 MS.gene058407:CDS 50.0%
! CTCGGGTTAGGGTAAGAAGA+TGG - chr3.2:2970398-2970417 None:intergenic 50.0%
! GTTAAAGGTTACAGCACCGG+TGG + chr3.2:2973031-2973050 MS.gene058407:CDS 50.0%
!! CCTGTTTCTGCAAGATGCCA+TGG + chr3.2:2970293-2970312 MS.gene058407:intron 50.0%
!! GTTCTGTTCATCGGCTTGCT+GGG - chr3.2:2973170-2973189 None:intergenic 50.0%
!! TCGCTGTTTTCGCCGAATTC+AGG - chr3.2:2970196-2970215 None:intergenic 50.0%
!! TGTTCTGTTCATCGGCTTGC+TGG - chr3.2:2973171-2973190 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr3.2:2973751-2973770 MS.gene058407:intron 55.0%
ACCAAGAGGAGAAGCAGTGG+TGG - chr3.2:2968477-2968496 None:intergenic 55.0%
AGGATTGCTGTCCATGCTCC+AGG - chr3.2:2974046-2974065 None:intergenic 55.0%
CCGATTCATACCGCAGTAGG+TGG - chr3.2:2969277-2969296 None:intergenic 55.0%
CCTCAAGGGTCCTTTCGGTA+CGG + chr3.2:2972981-2973000 MS.gene058407:CDS 55.0%
CGAAAGGACCCTTGAGGGTT+AGG - chr3.2:2972978-2972997 None:intergenic 55.0%
CGTACCGAAAGGACCCTTGA+GGG - chr3.2:2972983-2973002 None:intergenic 55.0%
GAGCTCGTCCTAACCCTCAA+GGG + chr3.2:2972967-2972986 MS.gene058407:CDS 55.0%
GCACTACTGAGGGGTAACCT+TGG + chr3.2:2973696-2973715 MS.gene058407:intron 55.0%
GCAGGCCTGGTGTTCAAATG+CGG + chr3.2:2969783-2969802 MS.gene058407:intron 55.0%
GGTACGCACGAACCAATTCG+CGG - chr3.2:2970132-2970151 None:intergenic 55.0%
GTGGTACGAATTCGGGTACG+CGG - chr3.2:2970835-2970854 None:intergenic 55.0%
TCCACCACTGCTTCTCCTCT+TGG + chr3.2:2968473-2968492 MS.gene058407:CDS 55.0%
TCGTGGCAGGATGGAGTTCT+TGG + chr3.2:2969812-2969831 MS.gene058407:CDS 55.0%
TGGAGCATGGACAGCAATCC+TGG + chr3.2:2974045-2974064 MS.gene058407:CDS 55.0%
TGTACTTGCGTTCTGGTCGG+TGG - chr3.2:2971791-2971810 None:intergenic 55.0%
! ACGTGGGGGGTATACAGAGT+CGG - chr3.2:2970788-2970807 None:intergenic 55.0%
! ATTCCTTTTGCGCAGCCCGA+CGG + chr3.2:2969989-2970008 MS.gene058407:CDS 55.0%
!! GCGAATTGGTTCGTGCGTAC+CGG + chr3.2:2970131-2970150 MS.gene058407:intron 55.0%
AATGCGGCGTAACTCGTGGC+AGG + chr3.2:2969799-2969818 MS.gene058407:CDS 60.0%
ACCAATTCGCGGTTCCCAGG+AGG - chr3.2:2970121-2970140 None:intergenic 60.0%
AGGACCAGATGCTCCACCCT+TGG - chr3.2:2971902-2971921 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr3.2:2973705-2973724 MS.gene058407:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr3.2:2973852-2973871 MS.gene058407:intron 60.0%
ATTCGCGGTTCCCAGGAGGA+TGG - chr3.2:2970117-2970136 None:intergenic 60.0%
CATACGCAGAGTCCGGGAAG+GGG - chr3.2:2973835-2973854 None:intergenic 60.0%
CCGTACCGAAAGGACCCTTG+AGG - chr3.2:2972984-2973003 None:intergenic 60.0%
CGAACCAATTCGCGGTTCCC+AGG - chr3.2:2970124-2970143 None:intergenic 60.0%
CTTCCCGGACTCTGCGTATG+CGG + chr3.2:2973835-2973854 MS.gene058407:intron 60.0%
GCAAGCCGAAACGGAACGTC+AGG - chr3.2:2973107-2973126 None:intergenic 60.0%
GCATACGCAGAGTCCGGGAA+GGG - chr3.2:2973836-2973855 None:intergenic 60.0%
GGAGCTCGTCCTAACCCTCA+AGG + chr3.2:2972966-2972985 MS.gene058407:CDS 60.0%
TCCTCCTGGGAACCGCGAAT+TGG + chr3.2:2970117-2970136 MS.gene058407:intron 60.0%
TCTGTGTCGCCCGCTTCTTC+AGG - chr3.2:2974163-2974182 None:intergenic 60.0%
TTCCCGGACTCTGCGTATGC+GGG + chr3.2:2973836-2973855 MS.gene058407:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3.2:2973820-2973839 MS.gene058407:intron 60.0%
! GTTGTGCCGTTGATCGCCAC+CGG - chr3.2:2973050-2973069 None:intergenic 60.0%
!! ACAGCACCGGTGGCGATCAA+CGG + chr3.2:2973041-2973060 MS.gene058407:CDS 60.0%
!! GGTTCGTGCGTACCGGTTTC+CGG + chr3.2:2970138-2970157 MS.gene058407:intron 60.0%
!! TCATCTGGTGGTGGTGGCAG+AGG - chr3.2:2971922-2971941 None:intergenic 60.0%
CGCATACGCAGAGTCCGGGA+AGG - chr3.2:2973837-2973856 None:intergenic 65.0%
CGGCGTAACTCGTGGCAGGA+TGG + chr3.2:2969803-2969822 MS.gene058407:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3.2:2973822-2973841 None:intergenic 65.0%
CTCCCGCATACGCAGAGTCC+GGG - chr3.2:2973841-2973860 None:intergenic 65.0%
GAAGCGGGCGACACAGAGAC+TGG + chr3.2:2974166-2974185 MS.gene058407:CDS 65.0%
GCTCCCGCATACGCAGAGTC+CGG - chr3.2:2973842-2973861 None:intergenic 65.0%
TCACCGTCGGGCTGCGCAAA+AGG - chr3.2:2969995-2970014 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr3.2:2973853-2973872 MS.gene058407:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 2968365 2974664 2968365 ID=MS.gene058407
chr3.2 mRNA 2968365 2974664 2968365 ID=MS.gene058407.t1;Parent=MS.gene058407
chr3.2 exon 2968365 2968508 2968365 ID=MS.gene058407.t1.exon1;Parent=MS.gene058407.t1
chr3.2 CDS 2968365 2968508 2968365 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2969388 2969497 2969388 ID=MS.gene058407.t1.exon2;Parent=MS.gene058407.t1
chr3.2 CDS 2969388 2969497 2969388 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2969787 2970057 2969787 ID=MS.gene058407.t1.exon3;Parent=MS.gene058407.t1
chr3.2 CDS 2969787 2970057 2969787 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2970963 2971101 2970963 ID=MS.gene058407.t1.exon4;Parent=MS.gene058407.t1
chr3.2 CDS 2970963 2971101 2970963 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2971620 2971986 2971620 ID=MS.gene058407.t1.exon5;Parent=MS.gene058407.t1
chr3.2 CDS 2971620 2971986 2971620 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2972947 2973312 2972947 ID=MS.gene058407.t1.exon6;Parent=MS.gene058407.t1
chr3.2 CDS 2972947 2973312 2972947 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2973402 2973480 2973402 ID=MS.gene058407.t1.exon7;Parent=MS.gene058407.t1
chr3.2 CDS 2973402 2973480 2973402 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2974037 2974236 2974037 ID=MS.gene058407.t1.exon8;Parent=MS.gene058407.t1
chr3.2 CDS 2974037 2974236 2974037 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
chr3.2 exon 2974565 2974664 2974565 ID=MS.gene058407.t1.exon9;Parent=MS.gene058407.t1
chr3.2 CDS 2974565 2974664 2974565 ID=cds.MS.gene058407.t1;Parent=MS.gene058407.t1
Gene Sequence

>MS.gene058407

ATGGGTCTCTTCAGATTCTCTCTCTGTTTTTTCATCCTCAACATTGCTCTGTTTTCAACACTCTGTTTTTCTGGTGATCCAACTGTTTACACAGAACTTCACGTCTCTTCCACCACTGCTTCTCCTCTTGGTGTTCCTCAAAAGGTCCCTTCTTTGCTTTTCTGATTCCATTTCGTTCTTTTAAGCTTGTTTTTTCATCTGGGTCGTTTTCTTTTGGCATAAAAATCATTCCTTTTTTCTTTCTTTCAAAAAAGTGTTGTTTTTTTGGGTTTTTGTTCATAAACCATAAAAATGAGTCCTTTTTTTGTTTGTTTCTGCTGAAAGTGGAGTAATTGTTTTCTTTGATTTTGTTTTTGTTTTAATCATTCATTCTTATCATGCAGTTGTAATAGTATAGTTTATTTTTTGTTAACCTCTGTTTCACTTTGTTATATGATTTTTTTCTTTGTAATGATCAATTTTTTTGTGTTGGTGTTTCATGAATGTTGAGATTGTATGTGTAAATGGTTTGATTCTGAGGTTGAAAAAGGGTCAAATCAAATGTTTTTTTTCTTCACGTATATTCAATTTTTGTTGTGTTTCTTATGGTTTGTTTTCTATGAAACAGTCCCTTTCAAATATGTTTAAAAAGTGTAAATTTGAAAAAGGTATCAACTTTTTAAAGTTTCTGCTTCAAACTATATGTTTGTGATTTTGTGACTGATGGTGGAATTGGCCCTTGTGTGATTTCAATGGTGATTAGTGAGATTTTTCATTTGTTAATTTTTTTCCCCAATTTTATTTTGTTTGTGCCCTAATTTTTTAATTTAAGCTAACTTTTCTCATATATGATTAACAATTAATATTAATAATAATTAATAATTATAATCATAAGATTATAAATTAAATTTTAAAGGTTCTATAGTTTTGCCACCTACTGCGGTATGAATCGGAATTAGTCTACGTAGTTGCGTGCATTTTCACTAAATGTTCTAAGAATTTATTGTTGATTATGATAATAATATGGTTAAATTCTGATTGTAGGTTATAGCTATAAATGGGAAATTTCCTGGACCTGTGATTAATGTTACTACAAATAATCATGTGGTAGTGAATGTGTATAATCAGCTGGATGAAGATCTTCTCATAACATGGTGAGTTTCACACTTTCACTGTTACATTGCAATATTTTACTATACTTTTTCGTTGTTCATAGAGAAATGATATTCTGAAATCAAAATTTTGATTTTTACTGTGGTGTCCTTTGGTTTCTGTATGTTATTTTGAAATGTGTGGAAGTTGTATAAGATAAAAAAGAAGAGATAGGTCGTGTTGAACACATACTATGTCACATTTGGTGGTTTTTTTTTTGTTGTTCAAATAAAACCATTGTTATTCATATACTTGCAATGTAACAAATTTGAGAAAAAATGTTTGTTGCAGGCCTGGTGTTCAAATGCGGCGTAACTCGTGGCAGGATGGAGTTCTTGGTACGAATTGTCCAATTCCTTCGAAATGGAATTGGACGTATCAGTTTCAAGTGAAGGATCAAATAGGGAGTTTCTTTTACTTCCCTTCCACTAATTTCCAAAGAGCTTCTGGTGGATTTGGTCCCTTTGTTATCAACAATAGGGAGATTATACAGATTCCTTTTGCGCAGCCCGACGGTGAAATTTTCATTATGATTGGTGATTGGTATACTCAAGACTACACGGTTAGTTATCGTCTTTCATTAAACTTTCTGCTGTAAATCATAGTCACATAATTCGTCCATCCTCCTGGGAACCGCGAATTGGTTCGTGCGTACCGGTTTCCGGTTCTTTTACGAATTGGTTCGTAAGAATTCGCACCTGAATTCGGCGAAAACAGCGAACCAGTGAACCATGCCCATGAACTGCATTCTAACCTCTGAGATGAGATTTTTTTGTTTCGCTAGATGTTTTGTTGTTCCTGTTTCTGCAAGATGCCATGGAATTTTCAAGTTCTGTAGCCTTTCTGCCGTCACTTTATTGATAGCTTGAAGATGAAGGGTAATTTGGGGTTTTAAAAGGCCATCTTCTTACCCTAACCCGAGTCCATTAACTCTGCTTTTGTTACAGGCCCATTTACTTAGTGTCACTGAAGAGTTTCAGGAAATGAACGAGTATAGGAAAGGTTTTGATGGCACATAGTGTTTGGGTTAGCTAGTACCACTTGAGTTACATAGGAAAAGAACCTATTGTTTGGAATTGATTACTATTAATTAATATTAATTTCATTGTCACTTAAAAATCCTTCTTGCGGTGGTTTTTTTTTTCATGTTGAAATACAATTATTTGCATTGCCACTTAAAAGTTTTATTTTTGAAAAAAAAATCTATTTATTTATTGGTAATTAAACATTTTTTAATTAAGAACGTACCGATTATTATATTTGAACGTATTACGAACCCAAACAGTGAACCGACTCTGTATACCCCCCACGTACCGAATTTTTTGACAGTCGCGAACCGCGTACCCGAATTCGTACCACGTACCAAAGCGAATTCCGAACCATGTGACTATGCTGTAAATTTTGAAGATGTTGTGAGTTTTAGTTGATATTTGATTGCTATTTTGTATGTTTGTTTGATAAATATAGGCTCTAAGATCAACACTTGACGGTGGAAAAGACCTCGGAATACCAGATGGTGTTCTTATCAATGGGAAGGGACCTTATCAGTACAATAATACTCTGGTACCTAATGGGATAGATCATGAAACAATTACTGTTGATCCAGGTATTTTTATCGCCATTAACTTTTATTGTCCAATTTGGTATTAGTCTTTTTCAGCAATGCCATTTTCATGCCGTACAAATAATGATATGATATGAAACACTGACACAATACCAATGCCTACATACAGTGTACACCACACCCATTTTCAATTTTTCCACTGGTTTATTGGTTTGAGTTGTGACTGTTTTTTTCCTCACTCTCTGTAAAGTAATTTGTTTTGATTATCTCTAAAAACTATATCTTATTCTTCAGCTCTCTCATTCATAATTTCTATTATTGTTCCGTGCTTTCTGTGAGAACATCAAATTTTGAACTCTTTTTCTGAACAGCGAACCCTTTTTCTTATATCCTTGATTTTCCGAAATGTTTCATTTAGAAGCTGACTATATCATATAGAATGGTATTAAGTAGATTGCTGCATTTGTTTCCACAGACTACTTTTAGAGTTATATTATTCAGCAAGTTGTTGGAATTGGAACAGTTTGAATTCTGACTGGAATTACAAATATATTTTTCAGGCAAGACTTACCGAATTCGTGTCCATAATGTGGGAATTTCAACTACCTTAAACTTTCGAATTCAAAATCATAATCTATTGCTGGTAGAAACTGAAGGGTATTACACCGATCAGGCAAATTACACCAACTTTGATATTCATGCTGGCCAGTCCTACTCTTTTCTGCTCTCCACCGACCAGAACGCAAGTACAGACTACTATATTGTTGCAAGTGCGAGGTTTGTGAATGAATCATTATGGCAGAAGGTTACAGGTGTTGCTGTTTTACACTACTCAAATTCCAAGGGTGGAGCATCTGGTCCTCTGCCACCACCACCAGATGATTTTTATAACAAGGGCGCATCAATGAACCAAGCAAAAAGTATCAGGTTTGTTTCTTAGAATCTGATGTCATAGAGGATTATATCGCATGGAATATAGTTCAATGTTTCATTATTTCTTAAGTATTTTTGGATCTTTTTATAATATAAAAGGAAGCCTATTTCATTTTATTATATATTATCAAATCTAAGTTAAGTGCAGTTTTAGGATGTGTTCAAAATTGTTTGCGAATGTCAGTGAGGTTAATATGTTATAGTATTGTTAAATTGAAGCTATAGACTATAGTTCTATAGCGTGGATGAATCTGAACAAATATCTATTGTTTCTGGGACATGCTATTCAGTATAAAATATGGTCAAATAATGGCTATATCGGAGCGCTATAGTATGGCTGCATAGCGGAATTTGATCAAACTGCAATTTTCTGGAATCCGCGTTAGCCAAAACTGAATTATTATTACCTATACCTACTTTGCGTTACGGATATAACAATTTACAAGAGTGGGTGATAACAAATTCCCTTGTGAGGTTAATCAACTAACATGTAATAGTGATAACAAATTTCCTTGTAAGGTTGACAACTTCATTAACATATTGGCTTGCTTCGCTTCTACATTGATACCTTTTGCAGCAGTGTTGTTAAATAGGCAACGAAATAGCGGAATTCGAACAAATTGCTATTTTGTACAAAATATTGTTAAATAGTGGCCCTAGCGCCGATATAACACTAACAGATTTTGAACAAACCGCTATTTTATGCGACTGACAACACTGATTTGCAAGAGTTAAGTGACAACTCACGTTGGTTGATGGAGTGTAAAATATAAATGTGGAGAGTTGTGCTAAAAAGATTATGGCATCTTGTTATATTTAGTTCTATTGACTCGGAATGATCAAGGGAAAAGCTATATGTTTTCTGTATTTTGTTGTTATATTTTGTAGCATCTTGATGTTTTCCCTTGTCAGCTGGCTAATATGCATTGTTTTTTACATCATGATGCTGAGTAGGCTAAACACATCTGCAAGTGGAGCTCGTCCTAACCCTCAAGGGTCCTTTCGGTACGGCTCAATCAAGATTACTGATTTTTACTTGTTAAAGGTTACAGCACCGGTGGCGATCAACGGCACAACTCGAGCTGCAATTAACGGAATCTCATTTCTAAAACCTGACGTTCCGTTTCGGCTTGCTGACAACAATCAGCTAAGAGGAATTTATAAGCTTGATTTTCCCAGCAAGCCGATGAACAGAACACCAGTGATTGATAGATCAATCATCAACGGTACATATAAAGGGTTCATTGAGATTGTGTTGCAAAACAATGACTCCTCTGTCCAAAACTTTCATCTGGATGGGTACTCCTTTTTCGTTGTTGGGTAAGAATCAACACCTTTCACTTTCTCTTCTTACTAATTACAATATTGTTTAATGATCACATTTGTAACAATTGATTTCTTGGATTTAGGATGGACTATGGCGATTGGTCCGAAAATTCAAGAAACACTTACAATAAGTGGGATGCAATATCTCGCAGCACAACTCAGGTGTGTGATCTTCTTCTTTTTATTGACAAGTGATAACGAGCTACATTTTCTAATGATTTTAATTTAGGGCCTGTTTACTAAGGACATGTTTCATGGTTTTAAAAGAGTTCCTTAGGTTTTTTTCAAATGATTTGTACATGTTAGCAAGCTTATGCATGGAGGTATGTGCTTTTTAAAATAAATTAAGGACATAATTTTTTCTCGTTAATTAGATGGCACTACTGAGGGGTAACCTTGGCGCAACTGGTAAAGTTGTTGTCATGTGACTGTAAGGTCACGGGTTCAAGTCCTGGAAACTGCCTCTTGTGTAAAAACAGGGTAAGGCTGCGTACAATACACCAAATGGTGGGACCCCTTCCCGGACTCTGCGTATGCGGGAGCTTCAGTGCACCGGGTTGCCCTTTTTTAATTAGATGGCACTACTATGTAATGTAAAAGTTACAAGCATTTGGTCTAAAGTTAGACCTAATACATAAATACCTTTGGAGGGAGTATTTTACAATTGTTCATGATAATCTGTTATATTTTACAATTGTCTATTTTACCAATATAACAGGTTTTTCCTGGAGCATGGACAGCAATCCTGGTGTCTCTAGACAATGTTGGATCATGGAATCTGAGAGCAGAAAATTTGGACAGGTGGTACCTAGGTCAAGAAACTTATCTGAGGATTGTCAATCCTGAAGAAGCGGGCGACACAGAGACTGGTGCACCAGAAAATGTTCTATATTGCGGCCCTCTCCAATACAAACAAAAGTAACGTCTCATTTTTCCATTGACAGTGTTTTTGTACCCGTTTGTTACAAGTCTATTTTTTATTTTTTTAAATCACATTTTGAAGTTTTCATTTGTTTTATCTACTGATTAAAAAAAAAAAAAATCTAAACTGTTTCAAACGAGTATCTCTTTTGAGTGGTTTTACTTGAAAATATTTTTTGATAAATATATTTTTTTGAAGAGTGATTTTCGTTATTGTATCAAACACAATAACTGTTTTCTGAAAAATCTCTGAAAATAATTTCTAAACTATTCGTTTTGTTTGTCTTCTCTTATTGTTAAATTTTTACTTTCTTTATACTTGCAGAAAGCAGACACATTCTTCATCTTCTGCAGATTCTACTTTGAGAAGTGGCTTCCTTTTCACATTGCTCATGGGAATTCTTGTGATTTTCACATCTAGTTAA
Protein sequence

>MS.gene058407.t1

MGLFRFSLCFFILNIALFSTLCFSGDPTVYTELHVSSTTASPLGVPQKVIAINGKFPGPVINVTTNNHVVVNVYNQLDEDLLITWPGVQMRRNSWQDGVLGTNCPIPSKWNWTYQFQVKDQIGSFFYFPSTNFQRASGGFGPFVINNREIIQIPFAQPDGEIFIMIGDWYTQDYTALRSTLDGGKDLGIPDGVLINGKGPYQYNNTLVPNGIDHETITVDPGKTYRIRVHNVGISTTLNFRIQNHNLLLVETEGYYTDQANYTNFDIHAGQSYSFLLSTDQNASTDYYIVASARFVNESLWQKVTGVAVLHYSNSKGGASGPLPPPPDDFYNKGASMNQAKSIRLNTSASGARPNPQGSFRYGSIKITDFYLLKVTAPVAINGTTRAAINGISFLKPDVPFRLADNNQLRGIYKLDFPSKPMNRTPVIDRSIINGTYKGFIEIVLQNNDSSVQNFHLDGYSFFVVGMDYGDWSENSRNTYNKWDAISRSTTQVFPGAWTAILVSLDNVGSWNLRAENLDRWYLGQETYLRIVNPEEAGDTETGAPENVLYCGPLQYKQKKQTHSSSSADSTLRSGFLFTLLMGILVIFTSS