Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011540.t1 | XP_003608700.2 | 98.9 | 538 | 6 | 0 | 1 | 538 | 1 | 538 | 0.00E+00 | 1099.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011540.t1 | Q8LPF8 | 76.9 | 477 | 106 | 2 | 25 | 500 | 42 | 515 | 1.0e-221 | 770.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011540.t1 | G7JIV4 | 98.9 | 538 | 6 | 0 | 1 | 538 | 1 | 538 | 0.0e+00 | 1099.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene011540 | MS.gene009264 | PPI |
MS.gene011540 | MS.gene50839 | PPI |
MS.gene011540 | MS.gene058758 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011540.t1 | MTR_4g100810 | 98.885 | 538 | 6 | 0 | 1 | 538 | 1 | 538 | 0.0 | 1112 |
MS.gene011540.t1 | MTR_5g012770 | 79.089 | 483 | 78 | 3 | 22 | 496 | 34 | 501 | 0.0 | 796 |
MS.gene011540.t1 | MTR_3g115220 | 62.470 | 413 | 153 | 2 | 79 | 490 | 82 | 493 | 0.0 | 548 |
MS.gene011540.t1 | MTR_5g099010 | 57.206 | 451 | 178 | 4 | 68 | 506 | 68 | 515 | 0.0 | 538 |
MS.gene011540.t1 | MTR_1g031590 | 44.192 | 396 | 187 | 9 | 74 | 444 | 115 | 501 | 3.96e-107 | 331 |
MS.gene011540.t1 | MTR_4g084570 | 38.664 | 494 | 271 | 14 | 28 | 496 | 68 | 554 | 9.22e-103 | 320 |
MS.gene011540.t1 | MTR_3g005340 | 41.355 | 428 | 230 | 9 | 81 | 491 | 123 | 546 | 7.24e-101 | 316 |
MS.gene011540.t1 | MTR_5g042200 | 42.222 | 405 | 211 | 8 | 104 | 491 | 81 | 479 | 3.00e-98 | 306 |
MS.gene011540.t1 | MTR_5g081690 | 41.284 | 436 | 230 | 14 | 73 | 492 | 88 | 513 | 3.31e-98 | 307 |
MS.gene011540.t1 | MTR_5g064620 | 42.711 | 391 | 213 | 6 | 78 | 464 | 84 | 467 | 4.27e-97 | 305 |
MS.gene011540.t1 | MTR_4g082310 | 41.606 | 411 | 217 | 8 | 104 | 497 | 93 | 497 | 4.73e-97 | 304 |
MS.gene011540.t1 | MTR_4g019210 | 41.531 | 431 | 228 | 11 | 76 | 491 | 202 | 623 | 7.22e-97 | 307 |
MS.gene011540.t1 | MTR_3g099480 | 45.652 | 368 | 189 | 7 | 108 | 468 | 140 | 503 | 8.85e-95 | 299 |
MS.gene011540.t1 | MTR_6g016015 | 44.032 | 377 | 203 | 6 | 101 | 470 | 108 | 483 | 1.95e-93 | 295 |
MS.gene011540.t1 | MTR_4g125460 | 39.110 | 427 | 236 | 11 | 79 | 490 | 62 | 479 | 3.01e-92 | 291 |
MS.gene011540.t1 | MTR_3g086570 | 39.492 | 433 | 235 | 11 | 80 | 489 | 119 | 547 | 6.43e-92 | 292 |
MS.gene011540.t1 | MTR_5g059260 | 44.382 | 356 | 174 | 7 | 109 | 444 | 158 | 509 | 1.06e-91 | 292 |
MS.gene011540.t1 | MTR_2g016470 | 36.364 | 462 | 239 | 14 | 80 | 491 | 160 | 616 | 1.91e-91 | 292 |
MS.gene011540.t1 | MTR_4g110030 | 41.076 | 409 | 229 | 7 | 101 | 498 | 109 | 516 | 6.27e-91 | 288 |
MS.gene011540.t1 | MTR_4g125460 | 38.876 | 427 | 237 | 11 | 79 | 490 | 201 | 618 | 1.06e-90 | 291 |
MS.gene011540.t1 | MTR_3g096020 | 44.675 | 338 | 179 | 4 | 111 | 444 | 192 | 525 | 1.75e-89 | 287 |
MS.gene011540.t1 | MTR_2g059350 | 42.400 | 375 | 208 | 6 | 101 | 468 | 108 | 481 | 2.79e-89 | 284 |
MS.gene011540.t1 | MTR_4g132590 | 36.199 | 442 | 226 | 11 | 73 | 464 | 32 | 467 | 1.05e-80 | 261 |
MS.gene011540.t1 | MTR_5g032100 | 36.222 | 450 | 242 | 14 | 79 | 490 | 60 | 502 | 1.91e-80 | 260 |
MS.gene011540.t1 | MTR_4g132590 | 36.199 | 442 | 226 | 11 | 73 | 464 | 131 | 566 | 1.74e-79 | 260 |
MS.gene011540.t1 | MTR_1g102030 | 37.471 | 427 | 248 | 9 | 79 | 490 | 61 | 483 | 8.41e-79 | 256 |
MS.gene011540.t1 | MTR_3g026650 | 38.760 | 387 | 223 | 8 | 111 | 489 | 176 | 556 | 1.02e-76 | 252 |
MS.gene011540.t1 | MTR_3g100310 | 35.681 | 426 | 233 | 12 | 101 | 489 | 94 | 515 | 2.38e-75 | 248 |
MS.gene011540.t1 | MTR_4g023030 | 39.848 | 394 | 209 | 10 | 111 | 489 | 236 | 616 | 1.82e-72 | 243 |
MS.gene011540.t1 | MTR_3g086570 | 41.587 | 315 | 160 | 8 | 80 | 373 | 119 | 430 | 3.65e-71 | 234 |
MS.gene011540.t1 | MTR_3g026650 | 41.587 | 315 | 175 | 4 | 111 | 420 | 176 | 486 | 2.02e-66 | 223 |
MS.gene011540.t1 | MTR_1g101990 | 38.909 | 275 | 163 | 4 | 220 | 490 | 6 | 279 | 1.83e-53 | 184 |
MS.gene011540.t1 | MTR_4g010990 | 31.250 | 368 | 221 | 9 | 78 | 433 | 46 | 393 | 1.40e-50 | 179 |
MS.gene011540.t1 | MTR_7g017330 | 34.868 | 304 | 172 | 9 | 97 | 380 | 88 | 385 | 3.77e-45 | 169 |
MS.gene011540.t1 | MTR_4g010990 | 31.677 | 322 | 189 | 8 | 124 | 433 | 2 | 304 | 1.41e-44 | 161 |
MS.gene011540.t1 | MTR_3g092590 | 29.650 | 371 | 232 | 9 | 40 | 383 | 12 | 380 | 1.50e-42 | 160 |
MS.gene011540.t1 | MTR_3g092590 | 29.650 | 371 | 232 | 9 | 40 | 383 | 12 | 380 | 4.75e-42 | 160 |
MS.gene011540.t1 | MTR_3g026650 | 40.351 | 228 | 128 | 3 | 111 | 334 | 176 | 399 | 8.06e-41 | 152 |
MS.gene011540.t1 | MTR_1g007390 | 28.382 | 377 | 235 | 10 | 40 | 383 | 12 | 386 | 1.51e-35 | 141 |
MS.gene011540.t1 | MTR_7g064210 | 40.113 | 177 | 94 | 2 | 212 | 377 | 13 | 188 | 7.79e-32 | 127 |
MS.gene011540.t1 | MTR_2g038320 | 26.879 | 346 | 207 | 12 | 101 | 436 | 85 | 394 | 2.49e-26 | 111 |
MS.gene011540.t1 | MTR_4g008200 | 27.729 | 339 | 199 | 12 | 108 | 435 | 35 | 338 | 2.60e-24 | 105 |
MS.gene011540.t1 | MTR_4g008200 | 27.729 | 339 | 199 | 12 | 108 | 435 | 86 | 389 | 7.40e-24 | 104 |
MS.gene011540.t1 | MTR_1g101985 | 47.170 | 106 | 54 | 1 | 79 | 184 | 61 | 164 | 1.06e-23 | 98.6 |
MS.gene011540.t1 | MTR_1g095680 | 41.860 | 86 | 39 | 1 | 234 | 308 | 9 | 94 | 4.57e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011540.t1 | AT4G16650 | 77.004 | 474 | 106 | 1 | 20 | 493 | 37 | 507 | 0.0 | 762 |
MS.gene011540.t1 | AT4G16650 | 77.004 | 474 | 106 | 1 | 20 | 493 | 37 | 507 | 0.0 | 762 |
MS.gene011540.t1 | AT1G76270 | 56.455 | 457 | 194 | 3 | 79 | 534 | 77 | 529 | 0.0 | 543 |
MS.gene011540.t1 | AT1G20550 | 54.088 | 477 | 206 | 5 | 25 | 490 | 16 | 490 | 0.0 | 539 |
MS.gene011540.t1 | AT4G38390 | 60.827 | 411 | 160 | 1 | 80 | 489 | 95 | 505 | 0.0 | 537 |
MS.gene011540.t1 | AT1G14970 | 44.089 | 406 | 201 | 10 | 107 | 491 | 8 | 408 | 2.16e-108 | 330 |
MS.gene011540.t1 | AT1G14970 | 44.089 | 406 | 201 | 10 | 107 | 491 | 34 | 434 | 4.97e-108 | 330 |
MS.gene011540.t1 | AT2G01480 | 47.875 | 353 | 168 | 7 | 108 | 444 | 154 | 506 | 1.06e-106 | 330 |
MS.gene011540.t1 | AT1G14970 | 44.089 | 406 | 201 | 10 | 107 | 491 | 154 | 554 | 2.55e-106 | 330 |
MS.gene011540.t1 | AT2G01480 | 47.875 | 353 | 168 | 7 | 108 | 444 | 154 | 506 | 6.01e-106 | 329 |
MS.gene011540.t1 | AT1G14020 | 42.356 | 399 | 217 | 6 | 104 | 490 | 87 | 484 | 4.44e-99 | 309 |
MS.gene011540.t1 | AT1G35510 | 42.469 | 405 | 209 | 8 | 108 | 492 | 159 | 559 | 4.14e-98 | 308 |
MS.gene011540.t1 | AT2G03280 | 42.462 | 398 | 215 | 7 | 104 | 488 | 84 | 480 | 4.92e-97 | 303 |
MS.gene011540.t1 | AT5G64600 | 41.935 | 403 | 208 | 9 | 108 | 489 | 117 | 514 | 1.56e-96 | 303 |
MS.gene011540.t1 | AT2G37980 | 38.990 | 495 | 258 | 17 | 35 | 497 | 141 | 623 | 1.13e-95 | 304 |
MS.gene011540.t1 | AT1G22460 | 42.822 | 404 | 207 | 11 | 108 | 491 | 160 | 559 | 1.13e-95 | 302 |
MS.gene011540.t1 | AT5G15740 | 43.501 | 377 | 205 | 6 | 101 | 470 | 99 | 474 | 4.27e-95 | 299 |
MS.gene011540.t1 | AT3G54100 | 40.323 | 434 | 235 | 11 | 79 | 497 | 195 | 619 | 4.98e-94 | 300 |
MS.gene011540.t1 | AT1G38065 | 43.514 | 370 | 190 | 8 | 108 | 460 | 26 | 393 | 1.80e-93 | 293 |
MS.gene011540.t1 | AT1G38065 | 43.514 | 370 | 190 | 8 | 108 | 460 | 36 | 403 | 2.43e-93 | 293 |
MS.gene011540.t1 | AT3G02250 | 43.236 | 377 | 206 | 6 | 101 | 470 | 99 | 474 | 2.81e-92 | 291 |
MS.gene011540.t1 | AT1G38131 | 43.514 | 370 | 190 | 8 | 108 | 460 | 155 | 522 | 6.19e-92 | 293 |
MS.gene011540.t1 | AT3G26370 | 40.441 | 408 | 215 | 10 | 105 | 490 | 155 | 556 | 9.26e-92 | 291 |
MS.gene011540.t1 | AT2G03280 | 39.765 | 425 | 215 | 8 | 104 | 488 | 84 | 507 | 2.99e-91 | 289 |
MS.gene011540.t1 | AT1G04910 | 41.860 | 387 | 217 | 5 | 79 | 460 | 61 | 444 | 1.53e-90 | 287 |
MS.gene011540.t1 | AT5G35570 | 40.610 | 426 | 229 | 10 | 80 | 490 | 225 | 641 | 3.19e-90 | 290 |
MS.gene011540.t1 | AT1G62330 | 38.614 | 404 | 199 | 9 | 109 | 464 | 222 | 624 | 2.29e-86 | 280 |
MS.gene011540.t1 | AT1G11990 | 38.875 | 409 | 219 | 9 | 79 | 464 | 163 | 563 | 4.61e-84 | 272 |
MS.gene011540.t1 | AT2G44500 | 40.674 | 386 | 218 | 6 | 111 | 489 | 180 | 561 | 3.25e-83 | 270 |
MS.gene011540.t1 | AT5G01100 | 36.131 | 429 | 248 | 10 | 79 | 490 | 190 | 609 | 5.19e-82 | 268 |
MS.gene011540.t1 | AT4G24530 | 36.345 | 476 | 257 | 16 | 55 | 490 | 48 | 517 | 5.98e-81 | 262 |
MS.gene011540.t1 | AT1G29200 | 37.678 | 422 | 218 | 9 | 83 | 460 | 44 | 464 | 1.76e-79 | 258 |
MS.gene011540.t1 | AT1G29200 | 37.678 | 422 | 218 | 9 | 83 | 460 | 44 | 464 | 1.76e-79 | 258 |
MS.gene011540.t1 | AT1G29200 | 37.678 | 422 | 218 | 9 | 83 | 460 | 160 | 580 | 1.71e-78 | 258 |
MS.gene011540.t1 | AT1G11990 | 35.650 | 446 | 219 | 10 | 79 | 464 | 148 | 585 | 1.73e-77 | 256 |
MS.gene011540.t1 | AT1G29200 | 38.363 | 391 | 197 | 8 | 113 | 460 | 1 | 390 | 3.58e-76 | 247 |
MS.gene011540.t1 | AT5G65470 | 34.956 | 452 | 245 | 14 | 79 | 489 | 59 | 502 | 7.74e-76 | 248 |
MS.gene011540.t1 | AT3G07900 | 37.613 | 444 | 254 | 13 | 63 | 491 | 139 | 574 | 1.62e-75 | 249 |
MS.gene011540.t1 | AT5G63390 | 37.824 | 386 | 229 | 7 | 111 | 489 | 167 | 548 | 9.16e-74 | 244 |
MS.gene011540.t1 | AT1G52630 | 30.130 | 385 | 233 | 9 | 72 | 443 | 39 | 400 | 6.16e-50 | 178 |
MS.gene011540.t1 | AT3G26370 | 41.395 | 215 | 114 | 4 | 105 | 309 | 155 | 367 | 9.83e-48 | 171 |
MS.gene011540.t1 | AT3G30300 | 35.974 | 303 | 172 | 9 | 95 | 380 | 90 | 387 | 6.47e-47 | 174 |
MS.gene011540.t1 | AT3G30300 | 35.974 | 303 | 172 | 9 | 95 | 380 | 90 | 387 | 6.47e-47 | 174 |
MS.gene011540.t1 | AT2G44500 | 41.667 | 228 | 126 | 3 | 111 | 334 | 180 | 404 | 6.38e-45 | 164 |
MS.gene011540.t1 | AT1G52630 | 30.120 | 332 | 199 | 7 | 124 | 443 | 2 | 312 | 6.94e-44 | 159 |
MS.gene011540.t1 | AT3G03810 | 32.075 | 371 | 226 | 10 | 38 | 383 | 10 | 379 | 1.90e-43 | 164 |
MS.gene011540.t1 | AT3G03810 | 32.075 | 371 | 226 | 10 | 38 | 383 | 10 | 379 | 1.90e-43 | 164 |
MS.gene011540.t1 | AT3G21190 | 26.471 | 340 | 201 | 12 | 108 | 435 | 90 | 392 | 1.75e-23 | 103 |
MS.gene011540.t1 | AT1G51630 | 24.706 | 340 | 207 | 11 | 108 | 435 | 91 | 393 | 1.10e-20 | 95.1 |
Find 122 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCATGCGCCAATTGATATT+TGG | 0.125119 | 8.3:+20284718 | MS.gene011540:CDS |
TGTATGTAACAGGCGATATA+TGG | 0.223337 | 8.3:+20288243 | MS.gene011540:intron |
TCACTCAATTCGTCTATAAA+TGG | 0.225919 | 8.3:-20288457 | None:intergenic |
GCTTAATATGTTCTCTCATT+TGG | 0.246182 | 8.3:-20288580 | None:intergenic |
CCTGAAAATGCCAGCATATC+TGG | 0.250790 | 8.3:-20287332 | None:intergenic |
CTTCTTTGCATTTGGTCTAA+TGG | 0.257972 | 8.3:-20288278 | None:intergenic |
CTCGGGACACGCATGGTATA+TGG | 0.258841 | 8.3:-20286575 | None:intergenic |
TAATTGGTTCATTAATTATC+TGG | 0.271850 | 8.3:+20286490 | MS.gene011540:CDS |
TTCATTTCCTCCGTTTATTT+CGG | 0.275809 | 8.3:-20288536 | None:intergenic |
TACTTACCCCAGTTCTTTGT+TGG | 0.313373 | 8.3:-20285586 | None:intergenic |
ATTGACCGCATGACCTTATC+TGG | 0.317222 | 8.3:-20286542 | None:intergenic |
GCGCTAAGCTTCTTTGCATT+TGG | 0.317689 | 8.3:-20288286 | None:intergenic |
CCACGCTTTCGTTCTCCGTC+AGG | 0.330147 | 8.3:-20287850 | None:intergenic |
ATCTCCTTTGTATAGATGTT+GGG | 0.341513 | 8.3:-20288009 | None:intergenic |
TCATGCGCCAATTGATATTT+GGG | 0.356114 | 8.3:+20284719 | MS.gene011540:CDS |
GCTCTCCCATGAATCCTCTT+TGG | 0.363004 | 8.3:-20288369 | None:intergenic |
TATGTTCTCTCATTTGGCTT+TGG | 0.365917 | 8.3:-20288574 | None:intergenic |
TCGGGACACGCATGGTATAT+GGG | 0.373647 | 8.3:-20286574 | None:intergenic |
AGCTTGGTGAAATCAGAAAA+AGG | 0.385190 | 8.3:+20287390 | MS.gene011540:CDS |
GAAGCTTAGCGCGCTGTTCA+TGG | 0.386331 | 8.3:+20288297 | MS.gene011540:CDS |
CCTTTCTCGAAAATGTATTC+CGG | 0.393462 | 8.3:-20288336 | None:intergenic |
GGACTGAACCAACAAAGAAC+TGG | 0.397018 | 8.3:+20285578 | MS.gene011540:CDS |
TTCACTGAACACACCTCAAA+TGG | 0.408067 | 8.3:-20287005 | None:intergenic |
ACTTGATCAAGATAATATTC+AGG | 0.409288 | 8.3:-20286608 | None:intergenic |
GGCGTGCCAAAGAGGATTCA+TGG | 0.413721 | 8.3:+20288363 | MS.gene011540:CDS |
TGTGATTCCCAAATATCAAT+TGG | 0.422550 | 8.3:-20284726 | None:intergenic |
GGAACTGACGCCGAAATAAA+CGG | 0.425295 | 8.3:+20288526 | MS.gene011540:CDS |
TAGTTCATCATCAAGGTCAT+TGG | 0.428900 | 8.3:-20286866 | None:intergenic |
CCCACTTCATGAGGAGTAAG+AGG | 0.434476 | 8.3:-20287880 | None:intergenic |
GTTCATGGCGAGGCATGAAA+TGG | 0.434734 | 8.3:+20288312 | MS.gene011540:CDS |
AGAGGATTCATGGGAGAGCC+AGG | 0.436961 | 8.3:+20288373 | MS.gene011540:CDS |
CATCTCCTTTGTATAGATGT+TGG | 0.438548 | 8.3:-20288010 | None:intergenic |
GTTATATAGCAGTCCATTTG+AGG | 0.440662 | 8.3:+20286992 | MS.gene011540:CDS |
CACGCTTTCGTTCTCCGTCA+GGG | 0.449075 | 8.3:-20287849 | None:intergenic |
ACATACCTGTATGTTGCATC+GGG | 0.449719 | 8.3:+20287937 | MS.gene011540:CDS |
CGTCCAGCTTTCATCTCTCC+TGG | 0.453678 | 8.3:-20288391 | None:intergenic |
AACATGGCCAGGATTCTTGC+TGG | 0.456728 | 8.3:+20288141 | MS.gene011540:CDS |
CACATACCTGTATGTTGCAT+CGG | 0.462028 | 8.3:+20287936 | MS.gene011540:CDS |
GCATTTAGAAATCTGACAAT+AGG | 0.464250 | 8.3:+20288505 | MS.gene011540:CDS |
ACGTTGTTTCTCATCTTGAA+TGG | 0.468318 | 8.3:+20284101 | MS.gene011540:CDS |
CAGGTTTGAGCCAGATATGC+TGG | 0.469168 | 8.3:+20287322 | MS.gene011540:intron |
TATTCAGGATCTGATTTCCT+CGG | 0.470623 | 8.3:-20286593 | None:intergenic |
AGATTTCTAAATGCGAGCTT+AGG | 0.471285 | 8.3:-20288496 | None:intergenic |
ATACGCGAGCGCATGTCAAA+TGG | 0.471651 | 8.3:+20285530 | MS.gene011540:CDS |
AGATAAGGTCATGCGGTCAA+TGG | 0.476341 | 8.3:+20286544 | MS.gene011540:CDS |
CCTTTGACCAGCAAGAATCC+TGG | 0.479961 | 8.3:-20288148 | None:intergenic |
CTACTACGGATGCAAAGAAA+GGG | 0.482045 | 8.3:+20284761 | MS.gene011540:CDS |
TTCTCACAGACACAAGTGCT+TGG | 0.492215 | 8.3:-20288433 | None:intergenic |
GTAATCAACAGCAGCTAGGC+GGG | 0.492518 | 8.3:-20288073 | None:intergenic |
CGGGACACGCATGGTATATG+GGG | 0.492983 | 8.3:-20286573 | None:intergenic |
ACTACTACGGATGCAAAGAA+AGG | 0.497464 | 8.3:+20284760 | MS.gene011540:CDS |
ATTCAGGATCTGATTTCCTC+GGG | 0.501133 | 8.3:-20286592 | None:intergenic |
AAAAGGTTTCAATTCTTCCT+CGG | 0.501153 | 8.3:-20288037 | None:intergenic |
AATTGAGTGAAGATGGAATC+CGG | 0.501267 | 8.3:+20288470 | MS.gene011540:CDS |
TGTAATGAGGATGCGAAAGA+TGG | 0.508686 | 8.3:+20286963 | MS.gene011540:CDS |
GTATGTAACAGGCGATATAT+GGG | 0.511833 | 8.3:+20288244 | MS.gene011540:intron |
ATAGACGAATTGAGTGAAGA+TGG | 0.512145 | 8.3:+20288463 | MS.gene011540:CDS |
TAAATGCGAGCTTAGGTGGC+CGG | 0.513190 | 8.3:-20288489 | None:intergenic |
ATTCCATGGTCGGTCATTTG+CGG | 0.516284 | 8.3:+20284034 | MS.gene011540:CDS |
GAGCCAGGAGAGATGAAAGC+TGG | 0.520156 | 8.3:+20288388 | MS.gene011540:CDS |
ACCCGTCGTCTCAAGAGTAT+TGG | 0.523710 | 8.3:-20286635 | None:intergenic |
ACAACAACGGTAACATGGCC+AGG | 0.529185 | 8.3:+20288130 | MS.gene011540:CDS |
CGGGAAGAGAATGAAAGAAA+AGG | 0.531327 | 8.3:-20288054 | None:intergenic |
TGTTAAAAGAGTTCCAGATA+AGG | 0.534714 | 8.3:+20286529 | MS.gene011540:CDS |
ACAAAACCAATACGACAACT+TGG | 0.536194 | 8.3:+20286931 | MS.gene011540:CDS |
TTGCTTATTGCCGCGAGCGG+AGG | 0.537115 | 8.3:+20285557 | MS.gene011540:CDS |
GGTTTGATGCTGCGAGCGCT+TGG | 0.537934 | 8.3:+20287901 | MS.gene011540:CDS |
CCAATTAACATCGAAAATGT+TGG | 0.538007 | 8.3:-20286474 | None:intergenic |
TCCTCTTACTCCTCATGAAG+TGG | 0.539526 | 8.3:+20287879 | MS.gene011540:CDS |
CCTCTTACTCCTCATGAAGT+GGG | 0.541378 | 8.3:+20287880 | MS.gene011540:CDS |
TTTCTAAATGCGAGCTTAGG+TGG | 0.543183 | 8.3:-20288493 | None:intergenic |
TTCGAGATCCATTCCATGGT+CGG | 0.545811 | 8.3:+20284024 | MS.gene011540:CDS |
GACTGAACCAACAAAGAACT+GGG | 0.546290 | 8.3:+20285579 | MS.gene011540:CDS |
GCCAATACTCTTGAGACGAC+GGG | 0.549625 | 8.3:+20286634 | MS.gene011540:CDS |
CCAGGATTCTTGCTGGTCAA+AGG | 0.549818 | 8.3:+20288148 | MS.gene011540:CDS |
TTGGTTCAGTCCTCCGCTCG+CGG | 0.550953 | 8.3:-20285567 | None:intergenic |
TCAAATGGACTGCTATATAA+CGG | 0.554034 | 8.3:-20286990 | None:intergenic |
GCAAATGACCGACCATGGAA+TGG | 0.559030 | 8.3:-20284032 | None:intergenic |
TGGCGAGGCATGAAATGGAC+CGG | 0.559422 | 8.3:+20288317 | MS.gene011540:CDS |
GTTAGAGTGAGTGTGGTTCG+TGG | 0.562414 | 8.3:-20283984 | None:intergenic |
TCTCCTTTGTATAGATGTTG+GGG | 0.562630 | 8.3:-20288008 | None:intergenic |
AAACCGCAAATGACCGACCA+TGG | 0.565822 | 8.3:-20284037 | None:intergenic |
CAATATTCTAAATACTACTA+CGG | 0.567932 | 8.3:+20284747 | MS.gene011540:CDS |
GCGTGCCAAAGAGGATTCAT+GGG | 0.571444 | 8.3:+20288364 | MS.gene011540:CDS |
CTGATGCTGTTGTTGTTGCA+CGG | 0.572212 | 8.3:+20286239 | MS.gene011540:CDS |
CCGCAGTTTCTTCTCTACAC+TGG | 0.574458 | 8.3:+20284144 | MS.gene011540:CDS |
CAATGTAATCAACAGCAGCT+AGG | 0.577338 | 8.3:-20288077 | None:intergenic |
AAGATCTCTGAGAGGCTGCA+TGG | 0.577808 | 8.3:-20287983 | None:intergenic |
TTAGCGCGCTGTTCATGGCG+AGG | 0.577856 | 8.3:+20288302 | MS.gene011540:CDS |
TGCTAACAACAACGGTAACA+TGG | 0.579524 | 8.3:+20288125 | MS.gene011540:CDS |
TGGAATGGATCTCGAACAGA+TGG | 0.584319 | 8.3:-20284017 | None:intergenic |
TACTTGCTTATTGCCGCGAG+CGG | 0.584367 | 8.3:+20285554 | MS.gene011540:CDS |
AAGATGAGAAACAACGTGAC+CGG | 0.587152 | 8.3:-20284095 | None:intergenic |
GGAGAGATGAAAGCTGGACG+AGG | 0.589299 | 8.3:+20288394 | MS.gene011540:CDS |
TGCCAATACTCTTGAGACGA+CGG | 0.593501 | 8.3:+20286633 | MS.gene011540:CDS |
TCTGTTCGAGATCCATTCCA+TGG | 0.594173 | 8.3:+20284020 | MS.gene011540:CDS |
AGCATCAAACCCACTTCATG+AGG | 0.596281 | 8.3:-20287889 | None:intergenic |
TGATTTCCTCGGGACACGCA+TGG | 0.609508 | 8.3:-20286582 | None:intergenic |
ATACAGGATTTGAGCCCTGA+CGG | 0.612438 | 8.3:+20287835 | MS.gene011540:intron |
CACACTTGTTGTACCTGAGT+TGG | 0.618209 | 8.3:+20286273 | MS.gene011540:CDS |
ATACCTGTATGTTGCATCGG+GGG | 0.619931 | 8.3:+20287939 | MS.gene011540:CDS |
AAAGAATTATGATCCAACTC+AGG | 0.620218 | 8.3:-20286286 | None:intergenic |
AAGGTAAAGGCGTGCCAAAG+AGG | 0.620555 | 8.3:+20288355 | MS.gene011540:CDS |
TTTCCCCAACATCTATACAA+AGG | 0.622108 | 8.3:+20288005 | MS.gene011540:CDS |
CCTGACGGAGAACGAAAGCG+TGG | 0.628749 | 8.3:+20287850 | MS.gene011540:CDS |
GTATTTGTTGCTAACAACAA+CGG | 0.634873 | 8.3:+20288117 | MS.gene011540:CDS |
GACAAAACCCCAAATGGGTG+TGG | 0.644598 | 8.3:+20283943 | None:intergenic |
AAATGGGTGTGGTGAAGTCG+TGG | 0.645174 | 8.3:+20283954 | None:intergenic |
TACAAAGGAGATGCTTGCCG+AGG | 0.652331 | 8.3:+20288020 | MS.gene011540:CDS |
CATATACCATGCGTGTCCCG+AGG | 0.654449 | 8.3:+20286576 | MS.gene011540:CDS |
TGTAATCAACAGCAGCTAGG+CGG | 0.658178 | 8.3:-20288074 | None:intergenic |
CAACTCAGGTACAACAAGTG+TGG | 0.676378 | 8.3:-20286272 | None:intergenic |
TACTACGGATGCAAAGAAAG+GGG | 0.685798 | 8.3:+20284762 | MS.gene011540:CDS |
TCAAAGCATGATAATTAACA+CGG | 0.686663 | 8.3:-20286903 | None:intergenic |
CTGACGGAGAACGAAAGCGT+GGG | 0.689450 | 8.3:+20287851 | MS.gene011540:CDS |
GAGTTCCAGATAAGGTCATG+CGG | 0.704682 | 8.3:+20286537 | MS.gene011540:CDS |
GGGACACGCATGGTATATGG+GGG | 0.711401 | 8.3:-20286572 | None:intergenic |
CATACCTGTATGTTGCATCG+GGG | 0.711632 | 8.3:+20287938 | MS.gene011540:CDS |
TTGGGGAAAAGATCTCTGAG+AGG | 0.727453 | 8.3:-20287991 | None:intergenic |
ACTGACGCCGAAATAAACGG+AGG | 0.750065 | 8.3:+20288529 | MS.gene011540:CDS |
CCAGTGTAGAGAAGAAACTG+CGG | 0.760750 | 8.3:-20284144 | None:intergenic |
ACTGAACCAACAAAGAACTG+GGG | 0.763615 | 8.3:+20285580 | MS.gene011540:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAACAAAGTATAAAA+TGG | - | chr8.3:20285416-20285435 | None:intergenic | 10.0% |
!! | TAACATAATAATGAATAAAA+GGG | - | chr8.3:20284183-20284202 | None:intergenic | 10.0% |
!! | TATATATAACATAATTAGAA+AGG | - | chr8.3:20285304-20285323 | None:intergenic | 10.0% |
!!! | ATATAAATTTTGTTTGATAA+AGG | + | chr8.3:20288203-20288222 | MS.gene011540:intron | 10.0% |
!!! | TTATATTAATTTTTCAAACA+AGG | - | chr8.3:20288189-20288208 | None:intergenic | 10.0% |
!!! | TTGTGTAAAAATATAATTTT+AGG | + | chr8.3:20287576-20287595 | MS.gene011540:intron | 10.0% |
!! | AATATTAACAAATTGTCTAT+GGG | - | chr8.3:20285440-20285459 | None:intergenic | 15.0% |
!! | AGTTATAATGTATTACAAAA+AGG | - | chr8.3:20286411-20286430 | None:intergenic | 15.0% |
!! | CAATCAATATATAATTAGAA+AGG | - | chr8.3:20285272-20285291 | None:intergenic | 15.0% |
!! | GAAATAACATTACTTTAATT+TGG | - | chr8.3:20286183-20286202 | None:intergenic | 15.0% |
!! | GTAACATAATAATGAATAAA+AGG | - | chr8.3:20284184-20284203 | None:intergenic | 15.0% |
!!! | AAAAATATAATTTTAGGTGT+TGG | + | chr8.3:20287582-20287601 | MS.gene011540:intron | 15.0% |
!!! | AATTTGCATATTGTTTTATA+CGG | + | chr8.3:20286326-20286345 | MS.gene011540:intron | 15.0% |
!!! | ATAGACAATTTGTTAATATT+GGG | + | chr8.3:20285440-20285459 | MS.gene011540:intron | 15.0% |
!!! | TTAAAGTAATGTTATTTCTA+TGG | + | chr8.3:20286185-20286204 | MS.gene011540:intron | 15.0% |
!! | AAATTTAAATTCCATACACA+AGG | - | chr8.3:20287031-20287050 | None:intergenic | 20.0% |
!! | ATGGATAAGTTTAATGTATA+TGG | + | chr8.3:20285677-20285696 | MS.gene011540:intron | 20.0% |
!! | CAATATTAACAAATTGTCTA+TGG | - | chr8.3:20285441-20285460 | None:intergenic | 20.0% |
!! | CAATATTCTAAATACTACTA+CGG | + | chr8.3:20284747-20284766 | MS.gene011540:CDS | 20.0% |
!! | CATTATAATAGCAATATGTA+AGG | + | chr8.3:20287253-20287272 | MS.gene011540:intron | 20.0% |
!! | GATAAAATCACATAATTCAA+TGG | + | chr8.3:20285953-20285972 | MS.gene011540:intron | 20.0% |
!! | TATCAAATTATTATCGATGT+CGG | - | chr8.3:20285937-20285956 | None:intergenic | 20.0% |
!!! | AATGAAAATGACTCAAATTT+TGG | - | chr8.3:20284906-20284925 | None:intergenic | 20.0% |
!!! | AGTAGTTTTTCAAAATAATC+TGG | + | chr8.3:20287688-20287707 | MS.gene011540:intron | 20.0% |
!!! | CATAGACAATTTGTTAATAT+TGG | + | chr8.3:20285439-20285458 | MS.gene011540:intron | 20.0% |
!!! | TAATTGGTTCATTAATTATC+TGG | + | chr8.3:20286490-20286509 | MS.gene011540:CDS | 20.0% |
!!! | TGTAATTGATGTGAATTTTT+TGG | + | chr8.3:20284682-20284701 | MS.gene011540:intron | 20.0% |
!!! | TTAAATTTAACTTCCATCAA+AGG | + | chr8.3:20287043-20287062 | MS.gene011540:intron | 20.0% |
! | AAAATCATACATACATGTCA+AGG | - | chr8.3:20284853-20284872 | None:intergenic | 25.0% |
! | AATAATATCTTCACTGCTTT+AGG | + | chr8.3:20285093-20285112 | MS.gene011540:intron | 25.0% |
! | ACTTGATCAAGATAATATTC+AGG | - | chr8.3:20286611-20286630 | None:intergenic | 25.0% |
! | CAAATGAGAGAACATATTAA+CGG | + | chr8.3:20288581-20288600 | MS.gene011540:CDS | 25.0% |
! | CATATAAGTGCTTATGTATA+AGG | + | chr8.3:20284267-20284286 | MS.gene011540:intron | 25.0% |
! | CATCAATTACACAACATATT+TGG | - | chr8.3:20284673-20284692 | None:intergenic | 25.0% |
! | GATAAGTTTAATGTATATGG+AGG | + | chr8.3:20285680-20285699 | MS.gene011540:intron | 25.0% |
! | TATATATATTGCTTCAAAGC+CGG | + | chr8.3:20285318-20285337 | MS.gene011540:intron | 25.0% |
! | TCAAAGCATGATAATTAACA+CGG | - | chr8.3:20286906-20286925 | None:intergenic | 25.0% |
! | TCATGATCTATGATGATTTA+TGG | + | chr8.3:20287297-20287316 | MS.gene011540:intron | 25.0% |
! | TCTTCAAAAACAACTGAAAA+AGG | - | chr8.3:20285780-20285799 | None:intergenic | 25.0% |
! | TGTCTTAATTAGATTACACT+AGG | - | chr8.3:20286123-20286142 | None:intergenic | 25.0% |
! | TTCTATCTCATTATGGTAAT+TGG | + | chr8.3:20285493-20285512 | MS.gene011540:intron | 25.0% |
! | TTGGTCAAAAAATTGTAATG+AGG | + | chr8.3:20286950-20286969 | MS.gene011540:CDS | 25.0% |
!! | AGTTGGATCATAATTCTTTT+TGG | + | chr8.3:20286290-20286309 | MS.gene011540:CDS | 25.0% |
!! | ATCAGTCTAAAATTACCATT+AGG | - | chr8.3:20284997-20285016 | None:intergenic | 25.0% |
!! | TACTGATTGAAATCAAGAAA+AGG | + | chr8.3:20285722-20285741 | MS.gene011540:intron | 25.0% |
!! | TTGTGTTTGCTAACTAAAAA+TGG | + | chr8.3:20284825-20284844 | MS.gene011540:intron | 25.0% |
!! | TTTTCTTGATTTCAATCAGT+AGG | - | chr8.3:20285723-20285742 | None:intergenic | 25.0% |
!!! | ATTGATGTGAATTTTTTGGT+AGG | + | chr8.3:20284686-20284705 | MS.gene011540:intron | 25.0% |
!!! | GGTAAAGAAATAACTAGTTT+TGG | - | chr8.3:20287780-20287799 | None:intergenic | 25.0% |
!!! | GTAATTTTAGACTGATTTCA+AGG | + | chr8.3:20285001-20285020 | MS.gene011540:intron | 25.0% |
AAAAGGTTTCAATTCTTCCT+CGG | - | chr8.3:20288040-20288059 | None:intergenic | 30.0% | |
AAAGAATTATGATCCAACTC+AGG | - | chr8.3:20286289-20286308 | None:intergenic | 30.0% | |
AAATCCTGTATTATTGCAAG+AGG | - | chr8.3:20287826-20287845 | None:intergenic | 30.0% | |
ACTGAGTTTAGATCATGTTA+AGG | - | chr8.3:20285211-20285230 | None:intergenic | 30.0% | |
ATCTCCTTTGTATAGATGTT+GGG | - | chr8.3:20288012-20288031 | None:intergenic | 30.0% | |
ATTACCTCTTGCAATAATAC+AGG | + | chr8.3:20287819-20287838 | MS.gene011540:intron | 30.0% | |
CCAATTAACATCGAAAATGT+TGG | - | chr8.3:20286477-20286496 | None:intergenic | 30.0% | |
CTGAGTTTAGATCATGTTAA+GGG | - | chr8.3:20285210-20285229 | None:intergenic | 30.0% | |
GAAGTCACTGTATTACAAAA+AGG | - | chr8.3:20286453-20286472 | None:intergenic | 30.0% | |
GATAAAGGAGTTGTGAAAAT+GGG | - | chr8.3:20287173-20287192 | None:intergenic | 30.0% | |
GATCATGAGAATTCAAACAT+TGG | - | chr8.3:20287285-20287304 | None:intergenic | 30.0% | |
GATTTCTTCTTGTATGTAAC+AGG | + | chr8.3:20288233-20288252 | MS.gene011540:intron | 30.0% | |
GCATTTAGAAATCTGACAAT+AGG | + | chr8.3:20288505-20288524 | MS.gene011540:CDS | 30.0% | |
TATAGGGATGAGATCATATA+TGG | - | chr8.3:20287121-20287140 | None:intergenic | 30.0% | |
TATTGTCAGTGGAAATGATA+TGG | - | chr8.3:20287466-20287485 | None:intergenic | 30.0% | |
TCAATTTCAGACAGTGATAA+AGG | - | chr8.3:20287188-20287207 | None:intergenic | 30.0% | |
TCACTCAATTCGTCTATAAA+TGG | - | chr8.3:20288460-20288479 | None:intergenic | 30.0% | |
TGAGTTTAGATCATGTTAAG+GGG | - | chr8.3:20285209-20285228 | None:intergenic | 30.0% | |
TGATAAAGGAGTTGTGAAAA+TGG | - | chr8.3:20287174-20287193 | None:intergenic | 30.0% | |
TGTATTATTGCAAGAGGTAA+TGG | - | chr8.3:20287820-20287839 | None:intergenic | 30.0% | |
TGTGATTCCCAAATATCAAT+TGG | - | chr8.3:20284729-20284748 | None:intergenic | 30.0% | |
TGTTAAAAGAGTTCCAGATA+AGG | + | chr8.3:20286529-20286548 | MS.gene011540:CDS | 30.0% | |
TTAACATGATCTAAACTCAG+TGG | + | chr8.3:20285210-20285229 | MS.gene011540:intron | 30.0% | |
TTAGGATAGATTACATCAGT+AGG | + | chr8.3:20285111-20285130 | MS.gene011540:intron | 30.0% | |
TTCATTTCCTCCGTTTATTT+CGG | - | chr8.3:20288539-20288558 | None:intergenic | 30.0% | |
! | AACATAATGGCTTAAGGTTT+TGG | + | chr8.3:20284535-20284554 | MS.gene011540:intron | 30.0% |
! | ACATAATGGCTTAAGGTTTT+GGG | + | chr8.3:20284536-20284555 | MS.gene011540:intron | 30.0% |
! | CCAACATTTTCGATGTTAAT+TGG | + | chr8.3:20286474-20286493 | MS.gene011540:CDS | 30.0% |
! | GGATCATAATTCTTTTTGGA+AGG | + | chr8.3:20286294-20286313 | MS.gene011540:CDS | 30.0% |
! | GTATTTGTTGCTAACAACAA+CGG | + | chr8.3:20288117-20288136 | MS.gene011540:CDS | 30.0% |
! | GTTTTGTCAGTAGAAATCAT+AGG | - | chr8.3:20287444-20287463 | None:intergenic | 30.0% |
! | GTTTTTGTAGTTCATCATCA+AGG | - | chr8.3:20286876-20286895 | None:intergenic | 30.0% |
!! | ATGAAGCTTTATTTGCCTAA+TGG | + | chr8.3:20284979-20284998 | MS.gene011540:intron | 30.0% |
!! | CAGATTTTTCGGTATTTTAC+AGG | + | chr8.3:20286810-20286829 | MS.gene011540:intron | 30.0% |
!! | TACATTTTCGAGAAAGGTAA+AGG | + | chr8.3:20288342-20288361 | MS.gene011540:CDS | 30.0% |
!! | TCAAATGGACTGCTATATAA+CGG | - | chr8.3:20286993-20287012 | None:intergenic | 30.0% |
!! | TCAGTTTTGATAACTCCTTT+TGG | + | chr8.3:20286768-20286787 | MS.gene011540:intron | 30.0% |
!! | TGTCACTTTCTATCTCATTA+TGG | + | chr8.3:20285486-20285505 | MS.gene011540:intron | 30.0% |
!!! | ATGTGAATTTTTTGGTAGGA+TGG | + | chr8.3:20284690-20284709 | MS.gene011540:intron | 30.0% |
!!! | GCATTTTCAGGTTGTTATTT+TGG | + | chr8.3:20287344-20287363 | MS.gene011540:CDS | 30.0% |
!!! | TTTCAGGTTGTTATTTTGGT+GGG | + | chr8.3:20287348-20287367 | MS.gene011540:CDS | 30.0% |
!!! | TTTTCAGGTTGTTATTTTGG+TGG | + | chr8.3:20287347-20287366 | MS.gene011540:CDS | 30.0% |
AAAAACAGCACATAGCAACA+TGG | - | chr8.3:20285041-20285060 | None:intergenic | 35.0% | |
AAACTTATCTACTGACGACT+GGG | - | chr8.3:20284638-20284657 | None:intergenic | 35.0% | |
AAAGGAGAAACTATTGTCAG+TGG | - | chr8.3:20287477-20287496 | None:intergenic | 35.0% | |
AATAGATCCTTGAACAAGTC+AGG | - | chr8.3:20287521-20287540 | None:intergenic | 35.0% | |
AATTGAGTGAAGATGGAATC+CGG | + | chr8.3:20288470-20288489 | MS.gene011540:CDS | 35.0% | |
ACAAAACCAATACGACAACT+TGG | + | chr8.3:20286931-20286950 | MS.gene011540:CDS | 35.0% | |
AGATTTCTAAATGCGAGCTT+AGG | - | chr8.3:20288499-20288518 | None:intergenic | 35.0% | |
ATAGACGAATTGAGTGAAGA+TGG | + | chr8.3:20288463-20288482 | MS.gene011540:CDS | 35.0% | |
ATCATGCGCCAATTGATATT+TGG | + | chr8.3:20284718-20284737 | MS.gene011540:CDS | 35.0% | |
ATGGCTCATTCACTTGATAT+TGG | - | chr8.3:20287801-20287820 | None:intergenic | 35.0% | |
ATTCACTTGTATGGTTGCTT+TGG | + | chr8.3:20284576-20284595 | MS.gene011540:intron | 35.0% | |
ATTCCTATTGTAGACCACAT+TGG | - | chr8.3:20284232-20284251 | None:intergenic | 35.0% | |
ATTTCCTCATAGCAGTGTAA+TGG | - | chr8.3:20285384-20285403 | None:intergenic | 35.0% | |
CACCACAATTGAATTCCAAA+AGG | - | chr8.3:20286786-20286805 | None:intergenic | 35.0% | |
CACTAGGCTCTATTAACAAT+AGG | - | chr8.3:20286107-20286126 | None:intergenic | 35.0% | |
CAGACACACCAAAAGATATA+GGG | - | chr8.3:20287137-20287156 | None:intergenic | 35.0% | |
CATCTCCTTTGTATAGATGT+TGG | - | chr8.3:20288013-20288032 | None:intergenic | 35.0% | |
CCTTTCTCGAAAATGTATTC+CGG | - | chr8.3:20288339-20288358 | None:intergenic | 35.0% | |
CTCACAAACATAATGGCTTA+AGG | + | chr8.3:20284529-20284548 | MS.gene011540:intron | 35.0% | |
CTTATTTCCATAAGTGCTAC+AGG | - | chr8.3:20284352-20284371 | None:intergenic | 35.0% | |
CTTCTTTGCATTTGGTCTAA+TGG | - | chr8.3:20288281-20288300 | None:intergenic | 35.0% | |
GAAAAAGAAAGACAAGAGCT+TGG | + | chr8.3:20287374-20287393 | MS.gene011540:CDS | 35.0% | |
GAGAAGACTCACAAACATAA+TGG | + | chr8.3:20284522-20284541 | MS.gene011540:intron | 35.0% | |
GTATGTAACAGGCGATATAT+GGG | + | chr8.3:20288244-20288263 | MS.gene011540:intron | 35.0% | |
GTTATATAGCAGTCCATTTG+AGG | + | chr8.3:20286992-20287011 | MS.gene011540:CDS | 35.0% | |
TAAACTTATCTACTGACGAC+TGG | - | chr8.3:20284639-20284658 | None:intergenic | 35.0% | |
TAGTTCATCATCAAGGTCAT+TGG | - | chr8.3:20286869-20286888 | None:intergenic | 35.0% | |
TATTCAGGATCTGATTTCCT+CGG | - | chr8.3:20286596-20286615 | None:intergenic | 35.0% | |
TCATGCGCCAATTGATATTT+GGG | + | chr8.3:20284719-20284738 | MS.gene011540:CDS | 35.0% | |
TCTATGATGATTTATGGCAC+AGG | + | chr8.3:20287303-20287322 | MS.gene011540:intron | 35.0% | |
TCTCCTTTGTATAGATGTTG+GGG | - | chr8.3:20288011-20288030 | None:intergenic | 35.0% | |
TGGAATCATATGTGTCATGT+CGG | + | chr8.3:20285973-20285992 | MS.gene011540:intron | 35.0% | |
TGGACAACATGTATGTCATA+AGG | - | chr8.3:20287101-20287120 | None:intergenic | 35.0% | |
TGGTGTACAATTCACTTGTA+TGG | + | chr8.3:20284567-20284586 | MS.gene011540:intron | 35.0% | |
TGTATGTAACAGGCGATATA+TGG | + | chr8.3:20288243-20288262 | MS.gene011540:intron | 35.0% | |
TTAAACTTATCCATCCACGA+CGG | - | chr8.3:20285671-20285690 | None:intergenic | 35.0% | |
TTGGTGAAATCAGAAAAAGG+TGG | + | chr8.3:20287393-20287412 | MS.gene011540:CDS | 35.0% | |
TTTCCCCAACATCTATACAA+AGG | + | chr8.3:20288005-20288024 | MS.gene011540:CDS | 35.0% | |
! | AGCTTGGTGAAATCAGAAAA+AGG | + | chr8.3:20287390-20287409 | MS.gene011540:CDS | 35.0% |
! | ATTTGCGGTTTCATGCTTTT+CGG | + | chr8.3:20284049-20284068 | MS.gene011540:CDS | 35.0% |
! | GATCTCATCCCTATATCTTT+TGG | + | chr8.3:20287126-20287145 | MS.gene011540:intron | 35.0% |
! | GGTCTCATTTCTCTTTTAAC+CGG | + | chr8.3:20284076-20284095 | MS.gene011540:CDS | 35.0% |
! | TATGTTCTCTCATTTGGCTT+TGG | - | chr8.3:20288577-20288596 | None:intergenic | 35.0% |
! | TCATAGGATTGTAGTCTTAC+AGG | - | chr8.3:20287428-20287447 | None:intergenic | 35.0% |
! | TGTGGTGGTAACAGATTTTT+CGG | + | chr8.3:20286799-20286818 | MS.gene011540:intron | 35.0% |
! | TTCACTTGTATGGTTGCTTT+GGG | + | chr8.3:20284577-20284596 | MS.gene011540:intron | 35.0% |
! | TTTCTCCTTTTATCACCCAT+GGG | + | chr8.3:20287487-20287506 | MS.gene011540:intron | 35.0% |
! | TTTTGACCAAGTTGTCGTAT+TGG | - | chr8.3:20286940-20286959 | None:intergenic | 35.0% |
!! | ACGTTGTTTCTCATCTTGAA+TGG | + | chr8.3:20284101-20284120 | MS.gene011540:CDS | 35.0% |
!! | ATTCTTTTTGGAAGGATGAC+AGG | + | chr8.3:20286302-20286321 | MS.gene011540:CDS | 35.0% |
!! | CTAGTTCTATCGATATCATC+AGG | - | chr8.3:20285838-20285857 | None:intergenic | 35.0% |
!! | GATTTTTAATTACACCGTCG+TGG | + | chr8.3:20285654-20285673 | MS.gene011540:intron | 35.0% |
!! | TGCTTTTTGTATTGCCAATG+TGG | + | chr8.3:20284215-20284234 | MS.gene011540:intron | 35.0% |
!!! | AGTTGTTTTTGAAGAATGCG+AGG | + | chr8.3:20285785-20285804 | MS.gene011540:intron | 35.0% |
!!! | CTCCTTTTGGAATTCAATTG+TGG | + | chr8.3:20286781-20286800 | MS.gene011540:intron | 35.0% |
!!! | CTTTTGGAATTCAATTGTGG+TGG | + | chr8.3:20286784-20286803 | MS.gene011540:intron | 35.0% |
!!! | GGTGTTGGTTTTATAAGTAG+AGG | + | chr8.3:20287597-20287616 | MS.gene011540:intron | 35.0% |
!!! | TAAGGTTTTGGGTAAAGATG+TGG | + | chr8.3:20284547-20284566 | MS.gene011540:intron | 35.0% |
!!! | TTCAGGTTGTTATTTTGGTG+GGG | + | chr8.3:20287349-20287368 | MS.gene011540:CDS | 35.0% |
AACAAAGAACTGGGGTAAGT+AGG | + | chr8.3:20285588-20285607 | MS.gene011540:intron | 40.0% | |
AACTTCCATCAAAGGCAAAG+TGG | + | chr8.3:20287051-20287070 | MS.gene011540:intron | 40.0% | |
AAGATGAGAAACAACGTGAC+CGG | - | chr8.3:20284098-20284117 | None:intergenic | 40.0% | |
AAGCTATCCTGTAGCACTTA+TGG | + | chr8.3:20284342-20284361 | MS.gene011540:intron | 40.0% | |
AATGCGAGGCTAGATTGATT+AGG | + | chr8.3:20285799-20285818 | MS.gene011540:intron | 40.0% | |
ACTACTACGGATGCAAAGAA+AGG | + | chr8.3:20284760-20284779 | MS.gene011540:CDS | 40.0% | |
ACTAGAGACAGATGCAAATC+TGG | + | chr8.3:20285137-20285156 | MS.gene011540:intron | 40.0% | |
ACTAGGTGTTTCATCATGAC+AGG | - | chr8.3:20286736-20286755 | None:intergenic | 40.0% | |
ACTGAACCAACAAAGAACTG+GGG | + | chr8.3:20285580-20285599 | MS.gene011540:CDS | 40.0% | |
ACTGACATTAACCAGCTACT+AGG | - | chr8.3:20286753-20286772 | None:intergenic | 40.0% | |
ATGATGAAACACCTAGTAGC+TGG | + | chr8.3:20286739-20286758 | MS.gene011540:intron | 40.0% | |
ATTCAGGATCTGATTTCCTC+GGG | - | chr8.3:20286595-20286614 | None:intergenic | 40.0% | |
CAATGTAATCAACAGCAGCT+AGG | - | chr8.3:20288080-20288099 | None:intergenic | 40.0% | |
CATGAAAGCCTCTTTCAACA+AGG | - | chr8.3:20285354-20285373 | None:intergenic | 40.0% | |
CCAGACACACCAAAAGATAT+AGG | - | chr8.3:20287138-20287157 | None:intergenic | 40.0% | |
CCTAGAGAATCATCCACATT+GGG | - | chr8.3:20284603-20284622 | None:intergenic | 40.0% | |
CGGGAAGAGAATGAAAGAAA+AGG | - | chr8.3:20288057-20288076 | None:intergenic | 40.0% | |
CTACTACGGATGCAAAGAAA+GGG | + | chr8.3:20284761-20284780 | MS.gene011540:CDS | 40.0% | |
CTTGTTGAAAGAGGCTTTCA+TGG | + | chr8.3:20285352-20285371 | MS.gene011540:intron | 40.0% | |
GACTGAACCAACAAAGAACT+GGG | + | chr8.3:20285579-20285598 | MS.gene011540:CDS | 40.0% | |
GTTTAGATCATGTTAAGGGG+AGG | - | chr8.3:20285206-20285225 | None:intergenic | 40.0% | |
TACTACGGATGCAAAGAAAG+GGG | + | chr8.3:20284762-20284781 | MS.gene011540:CDS | 40.0% | |
TACTTACCCCAGTTCTTTGT+TGG | - | chr8.3:20285589-20285608 | None:intergenic | 40.0% | |
TAGCAACATGGAGACTTAGA+AGG | - | chr8.3:20285029-20285048 | None:intergenic | 40.0% | |
TAGTGTGACCTTGTTGAAAG+AGG | + | chr8.3:20285343-20285362 | MS.gene011540:intron | 40.0% | |
TATGAAGCAAGGACACTCTA+TGG | - | chr8.3:20286017-20286036 | None:intergenic | 40.0% | |
TGCTAACAACAACGGTAACA+TGG | + | chr8.3:20288125-20288144 | MS.gene011540:CDS | 40.0% | |
TGTAATGAGGATGCGAAAGA+TGG | + | chr8.3:20286963-20286982 | MS.gene011540:CDS | 40.0% | |
TGTTCAGTGAACCTTGTGTA+TGG | + | chr8.3:20287017-20287036 | MS.gene011540:intron | 40.0% | |
TTCACTGAACACACCTCAAA+TGG | - | chr8.3:20287008-20287027 | None:intergenic | 40.0% | |
TTGCCAATGTGGTCTACAAT+AGG | + | chr8.3:20284226-20284245 | MS.gene011540:intron | 40.0% | |
TTTAATTACACCGTCGTGGA+TGG | + | chr8.3:20285658-20285677 | MS.gene011540:intron | 40.0% | |
TTTCTAAATGCGAGCTTAGG+TGG | - | chr8.3:20288496-20288515 | None:intergenic | 40.0% | |
! | ATAGAGTGTCCTTGCTTCAT+AGG | + | chr8.3:20286016-20286035 | MS.gene011540:intron | 40.0% |
! | ATATGTGTCATGTCGGTGTT+GGG | + | chr8.3:20285980-20285999 | MS.gene011540:intron | 40.0% |
! | CTCATAGCAGTGTAATGGAA+GGG | - | chr8.3:20285379-20285398 | None:intergenic | 40.0% |
! | GTGCTACAGGATAGCTTTTA+TGG | - | chr8.3:20284339-20284358 | None:intergenic | 40.0% |
! | GTTTCTCCTTTTATCACCCA+TGG | + | chr8.3:20287486-20287505 | MS.gene011540:intron | 40.0% |
! | TCATAGCAGTGTAATGGAAG+GGG | - | chr8.3:20285378-20285397 | None:intergenic | 40.0% |
! | TCTCGAACAGATGGCATTTT+TGG | - | chr8.3:20284011-20284030 | None:intergenic | 40.0% |
! | TTCTCCTTTTATCACCCATG+GGG | + | chr8.3:20287488-20287507 | MS.gene011540:intron | 40.0% |
! | TTTGCGGTTTCATGCTTTTC+GGG | + | chr8.3:20284050-20284069 | MS.gene011540:CDS | 40.0% |
!! | CAGTAATCCTGACTTGTTCA+AGG | + | chr8.3:20287511-20287530 | MS.gene011540:intron | 40.0% |
!! | CCGGAATACATTTTCGAGAA+AGG | + | chr8.3:20288336-20288355 | MS.gene011540:CDS | 40.0% |
!! | CCTATATCTTTTGGTGTGTC+TGG | + | chr8.3:20287135-20287154 | MS.gene011540:intron | 40.0% |
!!! | TCAGGTTGTTATTTTGGTGG+GGG | + | chr8.3:20287350-20287369 | MS.gene011540:CDS | 40.0% |
!!! | TTTTGGTGTTAGAGTGAGTG+TGG | - | chr8.3:20283994-20284013 | None:intergenic | 40.0% |
ACAGATGCAAATCTGGCATG+AGG | + | chr8.3:20285144-20285163 | MS.gene011540:intron | 45.0% | |
AGATAAGGTCATGCGGTCAA+TGG | + | chr8.3:20286544-20286563 | MS.gene011540:CDS | 45.0% | |
AGCATCAAACCCACTTCATG+AGG | - | chr8.3:20287892-20287911 | None:intergenic | 45.0% | |
ATACAGGATTTGAGCCCTGA+CGG | + | chr8.3:20287835-20287854 | MS.gene011540:intron | 45.0% | |
ATTCCATGGTCGGTCATTTG+CGG | + | chr8.3:20284034-20284053 | MS.gene011540:CDS | 45.0% | |
ATTGACCGCATGACCTTATC+TGG | - | chr8.3:20286545-20286564 | None:intergenic | 45.0% | |
CAACTCAGGTACAACAAGTG+TGG | - | chr8.3:20286275-20286294 | None:intergenic | 45.0% | |
CATATGTGTCATGTCGGTGT+TGG | + | chr8.3:20285979-20285998 | MS.gene011540:intron | 45.0% | |
CCAGTGTAGAGAAGAAACTG+CGG | - | chr8.3:20284147-20284166 | None:intergenic | 45.0% | |
CCCAATGTGGATGATTCTCT+AGG | + | chr8.3:20284600-20284619 | MS.gene011540:intron | 45.0% | |
CCTCTTACTCCTCATGAAGT+GGG | + | chr8.3:20287880-20287899 | MS.gene011540:CDS | 45.0% | |
CCTGAAAATGCCAGCATATC+TGG | - | chr8.3:20287335-20287354 | None:intergenic | 45.0% | |
CCTTCCATTACACTGCTATG+AGG | + | chr8.3:20285377-20285396 | MS.gene011540:intron | 45.0% | |
CTGCCTATGAAGCATGGATA+CGG | + | chr8.3:20285882-20285901 | MS.gene011540:intron | 45.0% | |
GAGTTCCAGATAAGGTCATG+CGG | + | chr8.3:20286537-20286556 | MS.gene011540:CDS | 45.0% | |
GCAAGGACACTCTATGGATT+AGG | - | chr8.3:20286011-20286030 | None:intergenic | 45.0% | |
GCCTAGAGAATCATCCACAT+TGG | - | chr8.3:20284604-20284623 | None:intergenic | 45.0% | |
GCGCTAAGCTTCTTTGCATT+TGG | - | chr8.3:20288289-20288308 | None:intergenic | 45.0% | |
GGAACTGACGCCGAAATAAA+CGG | + | chr8.3:20288526-20288545 | MS.gene011540:CDS | 45.0% | |
GGACTGAACCAACAAAGAAC+TGG | + | chr8.3:20285578-20285597 | MS.gene011540:CDS | 45.0% | |
TAGTTGCTGCCTATGAAGCA+TGG | + | chr8.3:20285876-20285895 | MS.gene011540:intron | 45.0% | |
TCAACAAGGTCACACTAGTC+CGG | - | chr8.3:20285340-20285359 | None:intergenic | 45.0% | |
TCACACCACTTTGCCTTTGA+TGG | - | chr8.3:20287059-20287078 | None:intergenic | 45.0% | |
TCCTCTTACTCCTCATGAAG+TGG | + | chr8.3:20287879-20287898 | MS.gene011540:CDS | 45.0% | |
TCTGTTCGAGATCCATTCCA+TGG | + | chr8.3:20284020-20284039 | MS.gene011540:CDS | 45.0% | |
TGCCAATACTCTTGAGACGA+CGG | + | chr8.3:20286633-20286652 | MS.gene011540:CDS | 45.0% | |
TGGAATGGATCTCGAACAGA+TGG | - | chr8.3:20284020-20284039 | None:intergenic | 45.0% | |
TGTAATCAACAGCAGCTAGG+CGG | - | chr8.3:20288077-20288096 | None:intergenic | 45.0% | |
TGTCATCTGTTCTCACTCAC+TGG | + | chr8.3:20285628-20285647 | MS.gene011540:intron | 45.0% | |
TGTCCGTATCCATGCTTCAT+AGG | - | chr8.3:20285888-20285907 | None:intergenic | 45.0% | |
TGTTAAGGGGAGGTAATGAG+TGG | - | chr8.3:20285196-20285215 | None:intergenic | 45.0% | |
TTCGAGATCCATTCCATGGT+CGG | + | chr8.3:20284024-20284043 | MS.gene011540:CDS | 45.0% | |
TTCTCACAGACACAAGTGCT+TGG | - | chr8.3:20288436-20288455 | None:intergenic | 45.0% | |
TTGGGGAAAAGATCTCTGAG+AGG | - | chr8.3:20287994-20288013 | None:intergenic | 45.0% | |
! | CCAGATATGCTGGCATTTTC+AGG | + | chr8.3:20287332-20287351 | MS.gene011540:CDS | 45.0% |
! | CCTCATAGCAGTGTAATGGA+AGG | - | chr8.3:20285380-20285399 | None:intergenic | 45.0% |
! | CTGATGCTGTTGTTGTTGCA+CGG | + | chr8.3:20286239-20286258 | MS.gene011540:CDS | 45.0% |
!! | CACACTTGTTGTACCTGAGT+TGG | + | chr8.3:20286273-20286292 | MS.gene011540:CDS | 45.0% |
!! | TGTTCAACCTCCACTTTTCC+AGG | - | chr8.3:20284492-20284511 | None:intergenic | 45.0% |
!!! | GGTTTCATGCTTTTCGGGTT+GGG | + | chr8.3:20284055-20284074 | MS.gene011540:CDS | 45.0% |
AAACCGCAAATGACCGACCA+TGG | - | chr8.3:20284040-20284059 | None:intergenic | 50.0% | |
AACATGGCCAGGATTCTTGC+TGG | + | chr8.3:20288141-20288160 | MS.gene011540:CDS | 50.0% | |
AAGTCAGGATTACTGCCCCA+TGG | - | chr8.3:20287506-20287525 | None:intergenic | 50.0% | |
ACAACAACGGTAACATGGCC+AGG | + | chr8.3:20288130-20288149 | MS.gene011540:CDS | 50.0% | |
ACGCAGCAACCTATGAAGCA+AGG | - | chr8.3:20286028-20286047 | None:intergenic | 50.0% | |
ACTGACGCCGAAATAAACGG+AGG | + | chr8.3:20288529-20288548 | MS.gene011540:CDS | 50.0% | |
ACTGCCCCATGGGTGATAAA+AGG | - | chr8.3:20287495-20287514 | None:intergenic | 50.0% | |
AGTCAGGATTACTGCCCCAT+GGG | - | chr8.3:20287505-20287524 | None:intergenic | 50.0% | |
ATACGCGAGCGCATGTCAAA+TGG | + | chr8.3:20285530-20285549 | MS.gene011540:CDS | 50.0% | |
CAGGTTTGAGCCAGATATGC+TGG | + | chr8.3:20287322-20287341 | MS.gene011540:intron | 50.0% | |
CCAGGATTCTTGCTGGTCAA+AGG | + | chr8.3:20288148-20288167 | MS.gene011540:CDS | 50.0% | |
CCCACTTCATGAGGAGTAAG+AGG | - | chr8.3:20287883-20287902 | None:intergenic | 50.0% | |
CCGCAGTTTCTTCTCTACAC+TGG | + | chr8.3:20284144-20284163 | MS.gene011540:CDS | 50.0% | |
CCTTTGACCAGCAAGAATCC+TGG | - | chr8.3:20288151-20288170 | None:intergenic | 50.0% | |
GCAAATGACCGACCATGGAA+TGG | - | chr8.3:20284035-20284054 | None:intergenic | 50.0% | |
GCCAATACTCTTGAGACGAC+GGG | + | chr8.3:20286634-20286653 | MS.gene011540:CDS | 50.0% | |
GCGTGCCAAAGAGGATTCAT+GGG | + | chr8.3:20288364-20288383 | MS.gene011540:CDS | 50.0% | |
GCTCTCCCATGAATCCTCTT+TGG | - | chr8.3:20288372-20288391 | None:intergenic | 50.0% | |
GTAATCAACAGCAGCTAGGC+GGG | - | chr8.3:20288076-20288095 | None:intergenic | 50.0% | |
GTTAGAGTGAGTGTGGTTCG+TGG | - | chr8.3:20283987-20284006 | None:intergenic | 50.0% | |
GTTCATGGCGAGGCATGAAA+TGG | + | chr8.3:20288312-20288331 | MS.gene011540:CDS | 50.0% | |
TAAATGCGAGCTTAGGTGGC+CGG | - | chr8.3:20288492-20288511 | None:intergenic | 50.0% | |
TACAAAGGAGATGCTTGCCG+AGG | + | chr8.3:20288020-20288039 | MS.gene011540:CDS | 50.0% | |
TACTCTTGAGACGACGGGTA+AGG | + | chr8.3:20286639-20286658 | MS.gene011540:intron | 50.0% | |
TACTTGCTTATTGCCGCGAG+CGG | + | chr8.3:20285554-20285573 | MS.gene011540:CDS | 50.0% | |
TCGGGACACGCATGGTATAT+GGG | - | chr8.3:20286577-20286596 | None:intergenic | 50.0% | |
TGAAGCATGGATACGGACAC+CGG | + | chr8.3:20285889-20285908 | MS.gene011540:intron | 50.0% | |
! | AAGATCTCTGAGAGGCTGCA+TGG | - | chr8.3:20287986-20288005 | None:intergenic | 50.0% |
! | AAGGTAAAGGCGTGCCAAAG+AGG | + | chr8.3:20288355-20288374 | MS.gene011540:CDS | 50.0% |
! | ACCCGTCGTCTCAAGAGTAT+TGG | - | chr8.3:20286638-20286657 | None:intergenic | 50.0% |
!! | TCCACTTTTCCAGGCAACGT+GGG | - | chr8.3:20284483-20284502 | None:intergenic | 50.0% |
!!! | CGGTTTCATGCTTTTCGGGT+TGG | + | chr8.3:20284054-20284073 | MS.gene011540:CDS | 50.0% |
AGAGGATTCATGGGAGAGCC+AGG | + | chr8.3:20288373-20288392 | MS.gene011540:CDS | 55.0% | |
CACGCTTTCGTTCTCCGTCA+GGG | - | chr8.3:20287852-20287871 | None:intergenic | 55.0% | |
CACGTTGCCTGGAAAAGTGG+AGG | + | chr8.3:20284482-20284501 | MS.gene011540:intron | 55.0% | |
CATATACCATGCGTGTCCCG+AGG | + | chr8.3:20286576-20286595 | MS.gene011540:CDS | 55.0% | |
CGGGACACGCATGGTATATG+GGG | - | chr8.3:20286576-20286595 | None:intergenic | 55.0% | |
CGTCCAGCTTTCATCTCTCC+TGG | - | chr8.3:20288394-20288413 | None:intergenic | 55.0% | |
CTCGGGACACGCATGGTATA+TGG | - | chr8.3:20286578-20286597 | None:intergenic | 55.0% | |
GAAGCTTAGCGCGCTGTTCA+TGG | + | chr8.3:20288297-20288316 | MS.gene011540:CDS | 55.0% | |
GAGCCAGGAGAGATGAAAGC+TGG | + | chr8.3:20288388-20288407 | MS.gene011540:CDS | 55.0% | |
GGAGAGATGAAAGCTGGACG+AGG | + | chr8.3:20288394-20288413 | MS.gene011540:CDS | 55.0% | |
GGCGTGCCAAAGAGGATTCA+TGG | + | chr8.3:20288363-20288382 | MS.gene011540:CDS | 55.0% | |
GGGACACGCATGGTATATGG+GGG | - | chr8.3:20286575-20286594 | None:intergenic | 55.0% | |
GTCAGTGTCCGTGTCATGTC+CGG | - | chr8.3:20285911-20285930 | None:intergenic | 55.0% | |
GTTAGAAGTCCCACGTTGCC+TGG | + | chr8.3:20284471-20284490 | MS.gene011540:intron | 55.0% | |
TACGGACACCGGACATGACA+CGG | + | chr8.3:20285900-20285919 | MS.gene011540:intron | 55.0% | |
TACTGACGACTGGGTCACGA+GGG | - | chr8.3:20284629-20284648 | None:intergenic | 55.0% | |
TCCCACGTTGCCTGGAAAAG+TGG | + | chr8.3:20284479-20284498 | MS.gene011540:intron | 55.0% | |
TGATTTCCTCGGGACACGCA+TGG | - | chr8.3:20286585-20286604 | None:intergenic | 55.0% | |
TGGCGAGGCATGAAATGGAC+CGG | + | chr8.3:20288317-20288336 | MS.gene011540:CDS | 55.0% | |
! | CTGACGGAGAACGAAAGCGT+GGG | + | chr8.3:20287851-20287870 | MS.gene011540:CDS | 55.0% |
! | TGGTTGCTTTGGGCCCAATG+TGG | + | chr8.3:20284587-20284606 | MS.gene011540:intron | 55.0% |
!! | CTCCACTTTTCCAGGCAACG+TGG | - | chr8.3:20284484-20284503 | None:intergenic | 55.0% |
ACTGACGACTGGGTCACGAG+GGG | - | chr8.3:20284628-20284647 | None:intergenic | 60.0% | |
CCACGCTTTCGTTCTCCGTC+AGG | - | chr8.3:20287853-20287872 | None:intergenic | 60.0% | |
CCTGACGGAGAACGAAAGCG+TGG | + | chr8.3:20287850-20287869 | MS.gene011540:CDS | 60.0% | |
CTACTGACGACTGGGTCACG+AGG | - | chr8.3:20284630-20284649 | None:intergenic | 60.0% | |
GGTTTGATGCTGCGAGCGCT+TGG | + | chr8.3:20287901-20287920 | MS.gene011540:CDS | 60.0% | |
TTAGCGCGCTGTTCATGGCG+AGG | + | chr8.3:20288302-20288321 | MS.gene011540:CDS | 60.0% | |
TTGCTTATTGCCGCGAGCGG+AGG | + | chr8.3:20285557-20285576 | MS.gene011540:CDS | 60.0% | |
TTGGTTCAGTCCTCCGCTCG+CGG | - | chr8.3:20285570-20285589 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 20283956 | 20288600 | 20283956 | ID=MS.gene011540 |
chr8.3 | mRNA | 20283956 | 20288600 | 20283956 | ID=MS.gene011540.t1;Parent=MS.gene011540 |
chr8.3 | exon | 20283956 | 20284165 | 20283956 | ID=MS.gene011540.t1.exon1;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20283956 | 20284165 | 20283956 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20284708 | 20284798 | 20284708 | ID=MS.gene011540.t1.exon2;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20284708 | 20284798 | 20284708 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20285525 | 20285601 | 20285525 | ID=MS.gene011540.t1.exon3;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20285525 | 20285601 | 20285525 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20286235 | 20286323 | 20286235 | ID=MS.gene011540.t1.exon4;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20286235 | 20286323 | 20286235 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20286466 | 20286655 | 20286466 | ID=MS.gene011540.t1.exon5;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20286466 | 20286655 | 20286466 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20286832 | 20287013 | 20286832 | ID=MS.gene011540.t1.exon6;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20286832 | 20287013 | 20286832 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20287325 | 20287427 | 20287325 | ID=MS.gene011540.t1.exon7;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20287325 | 20287427 | 20287325 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20287841 | 20288169 | 20287841 | ID=MS.gene011540.t1.exon8;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20287841 | 20288169 | 20287841 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
chr8.3 | exon | 20288255 | 20288600 | 20288255 | ID=MS.gene011540.t1.exon9;Parent=MS.gene011540.t1 |
chr8.3 | CDS | 20288255 | 20288600 | 20288255 | ID=cds.MS.gene011540.t1;Parent=MS.gene011540.t1 |
Gene Sequence |
Protein sequence |