AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50839

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50839.t1 MTR_3g005340 95.327 535 11 4 1 529 1 527 0.0 1047
MS.gene50839.t1 MTR_4g084570 57.034 526 204 6 6 529 25 530 0.0 618
MS.gene50839.t1 MTR_1g031590 57.229 498 197 4 33 529 47 529 0.0 605
MS.gene50839.t1 MTR_5g059260 57.113 478 186 4 53 526 72 534 0.0 555
MS.gene50839.t1 MTR_4g100810 41.727 417 219 9 108 520 68 464 4.21e-102 318
MS.gene50839.t1 MTR_3g115220 40.909 396 214 8 125 516 84 463 1.04e-95 302
MS.gene50839.t1 MTR_3g086570 39.702 403 228 9 133 526 130 526 1.89e-95 301
MS.gene50839.t1 MTR_5g032100 39.302 430 220 9 116 515 53 471 2.85e-93 294
MS.gene50839.t1 MTR_2g016470 38.902 437 234 9 123 526 159 595 3.02e-93 297
MS.gene50839.t1 MTR_5g012770 40.447 403 209 9 122 520 94 469 5.13e-92 291
MS.gene50839.t1 MTR_5g099010 39.850 399 213 8 125 516 92 470 8.40e-91 290
MS.gene50839.t1 MTR_5g064620 36.498 474 270 10 33 502 5 451 5.25e-90 286
MS.gene50839.t1 MTR_3g100310 37.613 444 226 11 117 526 68 494 4.69e-88 281
MS.gene50839.t1 MTR_3g099480 36.923 455 254 13 63 502 41 477 1.18e-87 280
MS.gene50839.t1 MTR_4g132590 37.939 427 231 8 133 527 50 474 1.09e-82 266
MS.gene50839.t1 MTR_4g132590 37.939 427 231 8 133 527 149 573 1.84e-81 265
MS.gene50839.t1 MTR_3g096020 38.522 379 215 6 125 502 165 526 4.32e-80 262
MS.gene50839.t1 MTR_2g059350 38.168 393 222 8 139 526 105 481 1.29e-79 259
MS.gene50839.t1 MTR_4g110030 38.083 386 220 7 141 521 108 479 6.28e-79 257
MS.gene50839.t1 MTR_6g016015 37.922 385 220 8 137 516 103 473 1.53e-78 256
MS.gene50839.t1 MTR_4g019210 36.919 409 230 12 125 526 207 594 1.08e-77 257
MS.gene50839.t1 MTR_4g125460 38.158 380 214 8 148 523 88 450 2.56e-77 251
MS.gene50839.t1 MTR_4g125460 38.158 380 214 8 148 523 227 589 6.09e-76 252
MS.gene50839.t1 MTR_5g081690 37.084 391 219 10 149 533 121 490 3.84e-75 247
MS.gene50839.t1 MTR_4g082310 36.104 385 216 9 149 525 97 459 1.65e-71 237
MS.gene50839.t1 MTR_1g102030 35.731 417 230 16 121 519 59 455 4.44e-71 236
MS.gene50839.t1 MTR_5g042200 35.550 391 229 11 137 518 68 444 2.94e-70 233
MS.gene50839.t1 MTR_3g086570 38.158 304 176 7 133 427 130 430 1.06e-66 222
MS.gene50839.t1 MTR_3g026650 33.415 407 249 8 125 526 144 533 8.87e-60 207
MS.gene50839.t1 MTR_4g023030 31.126 453 256 9 104 522 161 591 2.00e-57 202
MS.gene50839.t1 MTR_4g010990 30.311 386 228 9 125 500 49 403 8.38e-53 186
MS.gene50839.t1 MTR_3g026650 33.523 352 216 6 125 471 144 482 2.20e-51 183
MS.gene50839.t1 MTR_1g101990 39.024 246 129 8 261 501 3 232 1.12e-47 168
MS.gene50839.t1 MTR_4g010990 30.205 341 205 8 165 500 2 314 1.58e-43 158
MS.gene50839.t1 MTR_3g026650 32.714 269 163 6 125 388 144 399 2.84e-33 131
MS.gene50839.t1 MTR_7g017330 30.915 317 193 9 148 450 97 401 7.68e-32 130
MS.gene50839.t1 MTR_3g092590 28.852 305 203 4 148 444 89 387 9.45e-32 129
MS.gene50839.t1 MTR_3g092590 28.852 305 203 4 148 444 89 387 3.92e-31 128
MS.gene50839.t1 MTR_2g038320 27.110 391 233 11 109 494 52 395 6.38e-27 113
MS.gene50839.t1 MTR_1g007390 26.861 309 206 5 148 442 89 391 2.07e-25 110
MS.gene50839.t1 MTR_1g101985 39.450 109 59 2 121 225 59 164 1.39e-18 84.0
MS.gene50839.t1 MTR_7g064210 30.952 168 104 4 270 431 27 188 1.63e-18 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50839.t1 AT1G35510 66.422 545 161 4 1 529 1 539 0.0 742
MS.gene50839.t1 AT2G01480 55.238 525 216 6 6 529 28 534 0.0 607
MS.gene50839.t1 AT2G01480 54.635 507 211 6 6 511 28 516 0.0 583
MS.gene50839.t1 AT1G14970 55.020 498 208 6 33 529 53 535 0.0 583
MS.gene50839.t1 AT1G38131 56.818 484 183 6 53 527 67 533 0.0 565
MS.gene50839.t1 AT1G38065 62.189 402 144 1 134 527 3 404 0.0 543
MS.gene50839.t1 AT1G38065 64.644 379 134 0 149 527 36 414 0.0 540
MS.gene50839.t1 AT1G14970 61.055 398 153 1 132 529 20 415 0.0 538
MS.gene50839.t1 AT1G14970 61.979 384 146 0 146 529 6 389 0.0 529
MS.gene50839.t1 AT3G26370 40.943 403 223 9 133 526 138 534 1.07e-99 312
MS.gene50839.t1 AT4G38390 40.404 396 217 8 125 516 96 476 6.15e-95 300
MS.gene50839.t1 AT5G65470 39.716 423 212 9 125 515 61 472 5.61e-92 290
MS.gene50839.t1 AT1G76270 40.909 374 203 6 148 520 105 461 1.43e-90 289
MS.gene50839.t1 AT1G29200 38.588 425 228 7 132 524 49 472 1.74e-90 286
MS.gene50839.t1 AT1G29200 38.588 425 228 7 132 524 49 472 1.74e-90 286
MS.gene50839.t1 AT1G20550 41.351 370 199 6 148 516 108 460 2.79e-89 285
MS.gene50839.t1 AT1G29200 38.588 425 228 7 132 524 165 588 3.77e-89 286
MS.gene50839.t1 AT4G16650 40.943 403 218 8 122 520 92 478 4.20e-89 284
MS.gene50839.t1 AT4G16650 40.943 403 218 8 122 520 92 478 4.20e-89 284
MS.gene50839.t1 AT4G24530 36.937 444 237 10 113 526 65 495 2.36e-88 281
MS.gene50839.t1 AT1G22460 39.370 381 213 6 123 502 134 497 1.41e-86 278
MS.gene50839.t1 AT1G62330 36.490 433 238 9 125 522 196 626 1.86e-84 275
MS.gene50839.t1 AT1G11990 38.636 396 232 7 133 522 175 565 1.43e-83 271
MS.gene50839.t1 AT1G29200 38.596 399 216 6 154 524 1 398 1.85e-83 266
MS.gene50839.t1 AT5G64600 39.459 370 202 7 135 501 103 453 9.73e-83 267
MS.gene50839.t1 AT5G01100 36.973 403 229 9 125 521 192 575 3.50e-79 261
MS.gene50839.t1 AT1G11990 35.897 429 235 8 133 522 160 587 1.17e-78 259
MS.gene50839.t1 AT2G03280 38.933 375 207 7 149 517 88 446 3.18e-78 254
MS.gene50839.t1 AT1G14020 38.667 375 208 7 149 517 91 449 5.70e-78 254
MS.gene50839.t1 AT5G35570 36.829 410 233 11 124 527 225 614 7.28e-76 252
MS.gene50839.t1 AT5G15740 35.878 393 231 8 140 527 97 473 2.96e-74 244
MS.gene50839.t1 AT3G54100 34.491 432 252 11 101 520 168 580 8.59e-74 246
MS.gene50839.t1 AT1G04910 37.565 386 212 11 125 501 63 428 1.25e-73 243
MS.gene50839.t1 AT3G02250 36.220 381 226 7 140 516 97 464 5.00e-73 241
MS.gene50839.t1 AT2G37980 35.109 413 240 11 125 530 201 592 1.56e-72 243
MS.gene50839.t1 AT2G03280 36.318 402 207 8 149 517 88 473 2.30e-72 239
MS.gene50839.t1 AT2G44500 34.726 383 212 8 152 522 180 536 1.18e-61 213
MS.gene50839.t1 AT5G63390 32.995 394 231 8 125 506 135 507 4.98e-60 208
MS.gene50839.t1 AT3G07900 30.882 408 253 9 125 522 159 547 2.17e-54 193
MS.gene50839.t1 AT1G52630 31.694 366 211 8 125 481 48 383 3.11e-53 187
MS.gene50839.t1 AT3G26370 39.167 240 135 6 133 364 138 374 2.56e-51 180
MS.gene50839.t1 AT1G52630 30.625 320 193 6 165 481 2 295 8.75e-43 156
MS.gene50839.t1 AT3G03810 28.492 358 230 8 118 456 48 398 1.96e-35 140
MS.gene50839.t1 AT3G03810 28.492 358 230 8 118 456 48 398 1.96e-35 140
MS.gene50839.t1 AT3G30300 29.524 315 196 9 148 448 99 401 4.26e-33 134
MS.gene50839.t1 AT3G30300 29.524 315 196 9 148 448 99 401 4.26e-33 134
MS.gene50839.t1 AT2G44500 34.538 249 127 7 152 388 180 404 6.59e-33 130
MS.gene50839.t1 AT3G21190 24.302 358 221 8 127 479 69 381 3.56e-21 96.7
MS.gene50839.t1 AT1G51630 23.743 358 223 8 127 479 70 382 4.95e-21 95.9

Find 126 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAGAGCTTGCTCAATTTA+AGG 0.161428 3.4:+993912 MS.gene50839:CDS
TGCTGGAATGTTATTGTATA+TGG 0.184989 3.4:+987043 MS.gene50839:CDS
ATTGAGAGAAGTTGAATTAT+TGG 0.195868 3.4:-987207 None:intergenic
CACCATTTGCTTCAATTATA+AGG 0.212717 3.4:-988118 None:intergenic
TTAAATTGAGCAAGCTCTTC+TGG 0.230717 3.4:-993910 None:intergenic
CTCAACTCTTTCATAATCTT+TGG 0.230844 3.4:+987153 MS.gene50839:CDS
GAAGGTTCTTCCTCAGCTTT+TGG 0.238304 3.4:+989871 MS.gene50839:CDS
AATAAAACTCTTCCTCAAAT+AGG 0.255319 3.4:+987831 MS.gene50839:CDS
ACATTCCAGCAATATATAAT+AGG 0.255492 3.4:-987031 None:intergenic
ACACTATTTAAATGAAATAT+TGG 0.261431 3.4:-988738 None:intergenic
CATAACAAGATATACAAATT+TGG 0.289842 3.4:-986967 None:intergenic
TCAAAGCTGTACCTTATGTT+AGG 0.294651 3.4:-994199 None:intergenic
AACATATTTCCCACCACTTT+GGG 0.297173 3.4:-992389 None:intergenic
CTTAGGTGCTTTGCCAACTT+TGG 0.319483 3.4:+992295 MS.gene50839:CDS
CATTCCAGCAATATATAATA+GGG 0.328155 3.4:-987030 None:intergenic
CTTTCTGCAAGCGTTCTAAT+AGG 0.337272 3.4:-992337 None:intergenic
CCTTCATCTTGCAGCCATTT+CGG 0.349842 3.4:+989689 MS.gene50839:intron
GAACCAGGAGGAGGAGGATT+GGG 0.363196 3.4:-987116 None:intergenic
GGCCTCGGTGGCGTCGGTGC+TGG 0.370663 3.4:+986912 MS.gene50839:CDS
TTTGGACCATGATGATGATT+TGG 0.373594 3.4:-986949 None:intergenic
TATTTCATTTAAATAGTGTA+TGG 0.395586 3.4:+988742 MS.gene50839:CDS
GCACCCCTATTATATATTGC+TGG 0.399098 3.4:+987026 MS.gene50839:CDS
AACTGTTGAAGTATGTCATC+TGG 0.405679 3.4:-989779 None:intergenic
CCTCCCAATCCTCCTCCTCC+TGG 0.405829 3.4:+987113 MS.gene50839:CDS
AGCGGCGGCCTCGGTGGCGT+CGG 0.405981 3.4:+986906 MS.gene50839:CDS
AAACATATTTCCCACCACTT+TGG 0.408641 3.4:-992390 None:intergenic
CTCACTTCTTGATGGGTCAC+AGG 0.413756 3.4:+994104 MS.gene50839:CDS
AGGAGTAAGAGCGGCGGCCT+CGG 0.414594 3.4:+986897 MS.gene50839:CDS
AGAACCAGGAGGAGGAGGAT+TGG 0.419470 3.4:-987117 None:intergenic
CATCGAAAATGTCACCGAAA+TGG 0.420415 3.4:-989703 None:intergenic
TAATAAAGCCTGGTGCAAAT+CGG 0.426209 3.4:+993420 MS.gene50839:CDS
GCTTCGCCATAGTGATCAAA+AGG 0.428810 3.4:+995165 MS.gene50839:CDS
TCCAGCTGCAACATATACTA+AGG 0.440136 3.4:-993806 None:intergenic
GCTGGAATGTTATTGTATAT+GGG 0.443252 3.4:+987044 MS.gene50839:CDS
TGTGATGCAGTTGCTGTGGC+TGG 0.444509 3.4:+988690 MS.gene50839:CDS
TACCTTATAATTGAAGCAAA+TGG 0.449254 3.4:+988116 MS.gene50839:CDS
AATAAAGCCTGGTGCAAATC+GGG 0.451446 3.4:+993421 MS.gene50839:CDS
AGTTGAATTATTGGAAGAGA+AGG 0.458923 3.4:-987198 None:intergenic
ATGCATGGGTACAGCCGCTT+GGG 0.460172 3.4:+986873 MS.gene50839:CDS
CAGGTAGGGATGATGCTTAG+AGG 0.461529 3.4:+993763 MS.gene50839:intron
CCATCCACCCGATTTGCACC+AGG 0.462018 3.4:-993428 None:intergenic
GCTGAATCAGCAACGCTTGT+CGG 0.462593 3.4:+988142 MS.gene50839:CDS
TGATGCAGGGCCACTCATCT+AGG 0.467062 3.4:+994011 MS.gene50839:intron
TAAACCTGATAAAAGAAGAT+TGG 0.467496 3.4:+994159 MS.gene50839:CDS
TGAATTATTGGAAGAGAAGG+AGG 0.468813 3.4:-987195 None:intergenic
CAAAGCTGTACCTTATGTTA+GGG 0.472564 3.4:-994198 None:intergenic
TTAGAATTTCCCAAGTCAAA+TGG 0.479932 3.4:+988092 MS.gene50839:intron
TGGCAAAGCACCTAAGCCCT+TGG 0.490647 3.4:-992288 None:intergenic
CGTGGAAACATCTGTTTAAG+TGG 0.496809 3.4:-993859 None:intergenic
TGATGATGATTTGGAAGAAG+AGG 0.497481 3.4:-986940 None:intergenic
AATGCATGGGTACAGCCGCT+TGG 0.500838 3.4:+986872 None:intergenic
TATAAGGTAACCATTTGACT+TGG 0.501455 3.4:-988102 None:intergenic
TGATACAGTTAATGAAAGCT+TGG 0.504603 3.4:+987772 MS.gene50839:intron
ATGTCCTTTGACTCCGTTGG+AGG 0.506692 3.4:+993454 MS.gene50839:CDS
TAGAGAGAACCAGGAGGAGG+AGG 0.510248 3.4:-987122 None:intergenic
ACCTTAGTATATGTTGCAGC+TGG 0.511140 3.4:+993805 MS.gene50839:CDS
TGAGTATGACGGTGGGGCAG+AGG 0.518193 3.4:+993331 MS.gene50839:CDS
GGCAGAGGAGAAACGTGAAA+TGG 0.518630 3.4:+993346 MS.gene50839:CDS
AATTTCTTCATACAGTCACT+TGG 0.519812 3.4:+989728 MS.gene50839:CDS
CTTATAATTGAAGCAAATGG+TGG 0.523484 3.4:+988119 MS.gene50839:CDS
AAATGGATATCGCTCGTGAA+AGG 0.523973 3.4:+993363 MS.gene50839:CDS
GAAAGCTTGGAGTGTGAAAG+AGG 0.525362 3.4:+987785 MS.gene50839:CDS
TATTCGATAACCCTAACATA+AGG 0.526611 3.4:+994188 MS.gene50839:CDS
AAGATGTCCTTTGACTCCGT+TGG 0.528532 3.4:+993451 MS.gene50839:CDS
TCAATCTTAGAGTAAAAGCT+TGG 0.528802 3.4:+989825 MS.gene50839:CDS
GAAGTATTTGTTACAACTCA+AGG 0.529110 3.4:+994070 MS.gene50839:CDS
AGGGATGATGCTTAGAGGCA+TGG 0.538115 3.4:+993768 MS.gene50839:CDS
TACTGATTGAGCTAATCTGT+TGG 0.540656 3.4:-992254 None:intergenic
TCCAGCTCACTATCTTAAGA+AGG 0.541466 3.4:+989853 MS.gene50839:CDS
GCAGGGCCACTCATCTAGGT+TGG 0.545489 3.4:+994015 MS.gene50839:intron
CTTCTTCCAAATCATCATCA+TGG 0.547396 3.4:+986943 MS.gene50839:CDS
GGTCACAGGAGATATATGTA+TGG 0.548227 3.4:+994118 MS.gene50839:CDS
TGCCATCGGATCCAAATGCA+TGG 0.548512 3.4:+986858 None:intergenic
CCTGGTGCAAATCGGGTGGA+TGG 0.550028 3.4:+993428 MS.gene50839:CDS
GGGATGATGCTTAGAGGCAT+GGG 0.550201 3.4:+993769 MS.gene50839:CDS
ATAAGGTAACCATTTGACTT+GGG 0.551096 3.4:-988101 None:intergenic
ATATCGCTCGTGAAAGGAGT+TGG 0.552846 3.4:+993369 MS.gene50839:CDS
TTGCAGAAAGCATGGTTGAT+CGG 0.558395 3.4:+992350 MS.gene50839:CDS
CCAGGAGGAGGAGGATTGGG+AGG 0.561127 3.4:-987113 None:intergenic
AAATCTAAGAGCTCCAAAGT+TGG 0.561506 3.4:-992308 None:intergenic
GTGTGAAAGAGGATAGACAA+TGG 0.564266 3.4:+987796 MS.gene50839:CDS
CACAGGAGATATATGTATGG+TGG 0.569689 3.4:+994121 MS.gene50839:CDS
GAGGAGTCATTTAGCATGAA+AGG 0.570886 3.4:-987176 None:intergenic
AGCATAGTTCCCAAAGTGGT+GGG 0.572143 3.4:+992380 MS.gene50839:CDS
CATACCTCCAACGGAGTCAA+AGG 0.575718 3.4:-993458 None:intergenic
ACCTTCTTAAGATAGTGAGC+TGG 0.578959 3.4:-989854 None:intergenic
AAGCATAGGATAATAAAGCC+TGG 0.583107 3.4:+993410 MS.gene50839:CDS
ATTTCTTCATACAGTCACTT+GGG 0.583241 3.4:+989729 MS.gene50839:CDS
AATTAAGTGCATACCTCCAA+CGG 0.583495 3.4:-993467 None:intergenic
GGACTTCTATAGAGAGAACC+AGG 0.584685 3.4:-987131 None:intergenic
GAGGATTGGGAGGAAGACGA+TGG 0.584938 3.4:-987103 None:intergenic
ACAGGAGATATATGTATGGT+GGG 0.587238 3.4:+994122 MS.gene50839:CDS
ATGGGTACAGCCGCTTGGGA+AGG 0.592007 3.4:+986877 MS.gene50839:CDS
AAGCATAGTTCCCAAAGTGG+TGG 0.596503 3.4:+992379 MS.gene50839:CDS
CTATAGAGAGAACCAGGAGG+AGG 0.596886 3.4:-987125 None:intergenic
CTTCGCCATAGTGATCAAAA+GGG 0.597132 3.4:+995166 MS.gene50839:CDS
ATTACAAACAAAAGATACAC+TGG 0.597403 3.4:+993882 MS.gene50839:CDS
TAGAACGCTTGCAGAAAGCA+TGG 0.602757 3.4:+992342 MS.gene50839:CDS
GTAAATTCAAAAGAAAGCAT+AGG 0.604272 3.4:+993396 MS.gene50839:CDS
TGAGCTAATCTGTTGGAGAA+AGG 0.608944 3.4:-992247 None:intergenic
TTATAATTGAAGCAAATGGT+GGG 0.610318 3.4:+988120 MS.gene50839:CDS
CGCTCTTACTCCTTCCCAAG+CGG 0.620829 3.4:-986887 None:intergenic
CATGTTGTGAGTATGACGGT+GGG 0.621484 3.4:+993324 MS.gene50839:CDS
GCCATCGGATCCAAATGCAT+GGG 0.622631 3.4:+986859 None:intergenic
ATTCCAGCAATATATAATAG+GGG 0.624522 3.4:-987029 None:intergenic
CAAAGATTATGAAAGAGTTG+AGG 0.629535 3.4:-987152 None:intergenic
AGTAAGAGCGGCGGCCTCGG+TGG 0.631954 3.4:+986900 MS.gene50839:CDS
TCATGTTGTGAGTATGACGG+TGG 0.632511 3.4:+993323 MS.gene50839:CDS
AAAGCCTGGTGCAAATCGGG+TGG 0.634118 3.4:+993424 MS.gene50839:CDS
CGCTTGGGAAGGAGTAAGAG+CGG 0.641063 3.4:+986888 MS.gene50839:CDS
GAGCAGCCAACCTAGATGAG+TGG 0.642905 3.4:-994021 None:intergenic
AGAAAGCATGGTTGATCGGA+TGG 0.644563 3.4:+992354 MS.gene50839:CDS
GATATGTGATGCAGTTGCTG+TGG 0.644897 3.4:+988686 MS.gene50839:intron
CACCTCATTTCCAAAAGCTG+AGG 0.645775 3.4:-989881 None:intergenic
GCTCGTGAAAGGAGTTGGCG+AGG 0.646861 3.4:+993374 MS.gene50839:CDS
CTGTGACCCATCAAGAAGTG+AGG 0.654052 3.4:-994103 None:intergenic
AGCTGCAACATATACTAAGG+TGG 0.658104 3.4:-993803 None:intergenic
ACTTGGGAAGCATGTACATG+TGG 0.671732 3.4:+989745 MS.gene50839:CDS
ATAGTGTATGGAGAGACTCA+AGG 0.675542 3.4:+988754 MS.gene50839:CDS
GTGAAGCATAGTTCCCAAAG+TGG 0.676949 3.4:+992376 MS.gene50839:CDS
TTCCAGCACCGACGCCACCG+AGG 0.689231 3.4:-986914 None:intergenic
TAGTGATCAAAAGGGAACCG+AGG 0.701242 3.4:+995174 MS.gene50839:CDS
TTGGGAAGGAGTAAGAGCGG+CGG 0.722162 3.4:+986891 MS.gene50839:CDS
GTATTTGTTACAACTCAAGG+TGG 0.726210 3.4:+994073 MS.gene50839:CDS
ATGTTGTGAGTATGACGGTG+GGG 0.735863 3.4:+993325 MS.gene50839:CDS
CTTCTATAGAGAGAACCAGG+AGG 0.771668 3.4:-987128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.4 gene 986873 995520 986873 ID=MS.gene50839
chr3.4 mRNA 986873 995520 986873 ID=MS.gene50839.t1;Parent=MS.gene50839
chr3.4 exon 986873 987232 986873 ID=MS.gene50839.t1.exon1;Parent=MS.gene50839.t1
chr3.4 CDS 986873 987232 986873 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 987780 987852 987780 ID=MS.gene50839.t1.exon2;Parent=MS.gene50839.t1
chr3.4 CDS 987780 987852 987780 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 988096 988163 988096 ID=MS.gene50839.t1.exon3;Parent=MS.gene50839.t1
chr3.4 CDS 988096 988163 988096 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 988687 988775 988687 ID=MS.gene50839.t1.exon4;Parent=MS.gene50839.t1
chr3.4 CDS 988687 988775 988687 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 989703 989900 989703 ID=MS.gene50839.t1.exon5;Parent=MS.gene50839.t1
chr3.4 CDS 989703 989900 989703 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 992231 992435 992231 ID=MS.gene50839.t1.exon6;Parent=MS.gene50839.t1
chr3.4 CDS 992231 992435 992231 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 993308 993475 993308 ID=MS.gene50839.t1.exon7;Parent=MS.gene50839.t1
chr3.4 CDS 993308 993475 993308 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 993766 993933 993766 ID=MS.gene50839.t1.exon8;Parent=MS.gene50839.t1
chr3.4 CDS 993766 993933 993766 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 994019 994209 994019 ID=MS.gene50839.t1.exon9;Parent=MS.gene50839.t1
chr3.4 CDS 994019 994209 994019 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 995132 995195 995132 ID=MS.gene50839.t1.exon10;Parent=MS.gene50839.t1
chr3.4 CDS 995132 995195 995132 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
chr3.4 exon 995503 995520 995503 ID=MS.gene50839.t1.exon11;Parent=MS.gene50839.t1
chr3.4 CDS 995503 995520 995503 ID=cds.MS.gene50839.t1;Parent=MS.gene50839.t1
Gene Sequence

>MS.gene50839

ATGCATGGGTACAGCCGCTTGGGAAGGAGTAAGAGCGGCGGCCTCGGTGGCGTCGGTGCTGGAAAATCCTCTTCTTCCAAATCATCATCATGGTCCAAATTTGTATATCTTGTTATGTCAGCTATTTTCAGAAGAAGAGGGTTATTGCTATTTGCACCCCTATTATATATTGCTGGAATGTTATTGTATATGGGTTCTTTAAGCTTTGATATTGTTCTTGTTTCTAAACACCATCGTCTTCCTCCCAATCCTCCTCCTCCTGGTTCTCTCTATAGAAGTCCTCAACTCTTTCATAATCTTTGGCCTTTCATGCTAAATGACTCCTCCTTCTCTTCCAATAATTCAACTTCTCTCAATGTTGTAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCAAATAGACAATATGCTCAAATTATGGCTCTGTTTGCCAATGCCTGATTTTGAGTTTGTAGGTTATAAGCTCGTATGACAAGAAAGGCTTGTTTTATAACATGCTTTTGCAAAGGACTTATTTTTGGTTCTGCTGTCACTATAAGCCTTTGCAAACAGAGTCATTGCAAGTCTTTCTTAAACAGACACCCACTTCTTGCCAAACAGAGTCATTGTTTCCACTATAAGTTGTTTTCATAAACTACTATTTAGGGAAATAGCTTATGAACACTGACACACCATAAGCTATTTTTGTAAGCTCTCTCAGACACCCATTCAAGTGTTTATGTCAGTAGATAATTTGTTCATAAACTAATCCAAATATGGTCAGTGTATATATGTTAGTTTTTCGGAGTGAGATCTAAGTCCATTAAATGGTGTTCTTGTGTTTTGTGTTGCTTGAATCATGTACATATTTAGTGTTTGGCTGAAAACATGTGGTTGATTGATTGATTGATACAGTTAATGAAAGCTTGGAGTGTGAAAGAGGATAGACAATGGAAGCCATGTGCTAATAAAACTCTTCCTCAAATAGGTTTTTTCTCGTTTCTTATCTTTACTTCTTTTCTGGAAAGCATTTTGTCCAATTCTTAACATTTCTTTTACTTGTTTGGTTGTTGCACGTTTGCATTCCTTAGCTTTTCCACCTTTCTCACTCTATTTTGTTTCTTAGCTATCTTTGGATTTCTTATTCAAACTTCACCTATACGTGTTTGTTATAATTGTTGAAAGAACTTGCTAACTTTTTCTTGTCCTTTCTCCTTTTCTTTTTGCTTAGAATTTCCCAAGTCAAATGGTTACCTTATAATTGAAGCAAATGGTGGGCTGAATCAGCAACGCTTGTCGGTATGCCTATTTATGAGACCAAATATTTCATTTTTACTAGTCATTAATTTATTTAGTTAGGATTAGGAATCTTACATAGTACCCGTGAATGATGATTCCATTTCATATCTCCAGTCCCATTTTTGGTAGCAGAAAAAAATATTATCATCATAAAGCTGTTATTTTCTATTCAACTGTTTCTGTTATCAAGTTGTAAAAAAAAAAAAAAAAAGAATCAAATATAAATTATTATGAAATCAATCTCTAGAATCATCATCCAGGGATGTTAAAGAGCTGCTATATTGGGGCTATAATGCTATTGCAAAGCAGAATTTGAACAAATTGTTATTATTCTGCGATATGCTATTTAGTACAAAATATTGTGAAATAGAGGCTATTACATGTTGAATATGGTGGTAGGCTGCCAGGCATACATGTTGAATGCTATTTGATAGACATCGATGATCTGTTTTGCTTTCCACATTGGATCATGTGTCCAACTGTCCATATTGTTCTCGAACTTATTATACTACTCACTATGCAGATATGTGATGCAGTTGCTGTGGCTGGATTACTAAATGCAACTCTTATCATTCCAATATTTCATTTAAATAGTGTATGGAGAGACTCAAGGTAATTGATTTTGTTATGCTTAGTCGTAAAATAGGTAACATGATTATGGTTGTTGTTTTAATGGCTGTCAAATCCCATTGATATTGCTCAAACTATTTTAGTTTCTTCTCAACCATATCATTCACACGGGTGTTTAAATATGAAAAATGAGTCGTTTTTCATCATTCTACTTCCATGAGGTCCACCATTTTTATGGGTCATATGCAAGACAGGTCTGATAGGATCTCATCTTAAAAAGATTGAACATCGCCTTGAATTTTTTTTAAGTAAATCTTTGTAGCTGACCCCACTTGTTGTAAAAGGCTAAGGTTGTTGTATTAAATCTTCGGGATGCACTTCAAATTTGAGGATTGTTATATATGGATAGAAAGGAAATAATCACAACTAATACCATGCATTTTAGTGAGGGAAAATAAGTGAGGCTAGGTACTATATAGAGCATACTTCTGTTTTTCTACAATGAGAGTGACCGTTTTCTTAATTTTTACTTATTTATCTACGGTGTGTAGTTTATCTCTTATAGAAAGTTGATAAGTTTTGTAAATGAAAACAAATAGCTCTGCATACTGCATCTATTTGAGTTTTGGTCTTTTACTTTTTTGACATATCTAGCACTATTCACTTGGAACAGAAGATCAATCGAATATCCTGAACGTCGGAAGTCATCTTAAACTTACTTATGAATGCAAGACTCATAAGTAATAGTCAAAGATGTTGAACTGAGTCCATTACATTAGTTGCCACAACATTGGCTTATATTACATCATTTAAAGGAACTACAATTTGATGATTTATTTACACTCCTTTTTGTGCTTAACCGAGACATCTGATATTCAACCTTTGTTAAGTTTTGTATATATCAAACATAGGGTTCTTTGTAATTCTCTTGTTTAAATTAGAAAAGTTTACGTATCCTTCATCTTGCAGCCATTTCGGTGACATTTTCGATGAAAATTTCTTCATACAGTCACTTGGGAAGCATGTACATGTGGTAAGAGAACTTCCAGATGACATACTTCAACAGTTTGACAATAACATAAGTAACATTGTCAATCTTAGAGTAAAAGCTTGGTCTAGTCCAGCTCACTATCTTAAGAAGGTTCTTCCTCAGCTTTTGGAAATGAGGTGTGTGCCTTTCTCTCTTCTCCTGTTTATTCCTCACTGGTCTTCCAGTTCTTCTGGCTTGAAATTAATTTCAGCTGTATGTTTAAAGTTGATTCTCCTTTTAACAAAGTTCAATTATTCTTGATAGCAATTACAAATGCTGAAGATGTAAAATTGTATGATAAACACATTTTCTAATGGAAGATAGAGAGAATACGTTATTTTGGCAACTTAAACATGATTTGCACCACATTTTTGGCTGCTTGAGTTTCCCGTGTATATATTCACTTATACAATTGTATCTGAGTACTTGACATTTTAAATAGATTTGATATAACTTATGGAACACGAAGTCTTCAACCACTAGAGACAAATTTGACAATCAAGCTCTATTGAATATTTTACATAATATTTAATATATTTAATTTAATTGATTTATATTTTCTTGATAAATTGTTAAAATCACAGTCTTTTATTTCAGCTCTGATTGAAACTCTTATCTCAATTATCACTTTCTCCCAAACATAAAAATCGAGATTCTTAGTCAAGTCTTATTCTCACAAAATTGGAATTGGAATTGGAATTGAAATCTAGATTCTTAACTACGATGCCAATTCTAAAAGTTACCCTTAACATACGCATTAAAAAAGAACTTGATTTGAATGGCTGTGGCGTTAAAGAAAACTCGACTTTTGGCAGAATGTAATGGTGTCAACTGATCATGAGAGTCTAACTCTGCTTGGTGGGTAAAGTTATTGTTGCTGTTGCAGCTAAAAACAGGTAGACTGATGGGTTGTATTTTGTTGTGTGTTAAGTTAAAATTGGCATTGGTTCGTTAAACTAAATGTTCCAATGTGAAAAGTGGAAATGCACTCAGATGTTATACACTTGCTCTGGCCCCATATTTAAGAAGAAAAAACAAAAATCATCAAAACCAAGGGGGCTCATTTAATGATTTATTTTTGAAAGATTATTTCAAATATAACCTTGACATTAAATATCTTGACACCCACTAATGTGGGAAATAAATGCATTCACTAATGTGGGAAATAAATGCATTCTTAATAAACATATAAAGGGTATAAAAGTCATTTGAGCAATAAGTAAATGCATCTTAATATTTGCTATTTTTTCTTTTAACGGGAACAAGAAAACTCCATGTTTTTTCTTATATATAGAACCAGAGGAAAAACGAAAGCTTGTATAGGTGATTTAAATCAAAAAATTTGAATGTCTGACGTGTCATGAATTGTTTATTGGTTTTGTGGTCCCCCCTGCTGACTTGGAACAGATGCAGGGAAGGTATTGAGTCAAAGGTTGCATGTTACAAAAAATGCCACACCCTGATCCCCTGGCATTATAGTTGTAGGCACCCTGTTGAATCTGTTCTAGTTCTTTATTACGATTAGGCAAAATTATACAAGGTGTCTTTTATGGTAATTTTTTGTATCAATTTAGTCTTTTATCTTTTTTTCATGTCAAGGTAGTCCTTTATGTTTAAAAATGCCGACAATGTTGTACCAAACTTCATTTTTCATTCATATATGTAACCAAAAGTCTTAACCAGTTCATCAAAATTGCATCTAAATCACATCAAAATGAGTGTTACAATATCTAATCCAATAAAAACATCAAAATCAACATGATTTTTTCAGTTTATATCTAAGATTGTGGCATTGTTGTCAACAGGGTTCTAATTGTGGTGCTGAGTGATGGACATTCTTTATAGTGTGTGTGTGTGTGTGTGTGTGTGTTGAAGGAGTCTTTATAGTATGCTATCATTTAGGGATTATGCACGCAAATTTGTAACATACGCGGATGGAGAATGAAGGTCGGTCCAACGATGTAAACATTTTTAAACATAGATGATTAATTTGACATGGAAAAACAATAAAGGATTACTATTGGGAATTATAATCATAACAAGGAAAAACCCTTATTGGTATATTATTGGATGAACAATATGGATGAGGATAATTAGGATTTATGTTAGTTGTTATCCTTGCCATTTGGTTGTTAGTTAGTTAGTTGGAGGTCTATATATAAGGTTTCCCTTTCTATCTTAGAGGTATCTTTTAACATTTTACCTTTGACTTGAAAATTTCCTTTGTTAGGGGAGTATCTTTGTGTATTTTCTTTTTGGCAATTAATAAAACTATAGGTACGAATGAACTCCCTTTCTGCTTGAGTTATTTCAAAAGAATTCTAACTACATGGACACAAAATTATACTATAGGACCCATGATGTATTTTTGCCTTTTTATTTCGATTACTATTATTCTCTTTGAAGCATATCCTTTCCAATATATAGTTTTTGGCTCCTGAGAGGACTTGGTTCGTGCTTGTTGCAGGGCTGTTCGTATTGCACCTTTCTCCAACAGATTAGCTCAATCAGTACCCTCAAAAATCCAAGGGCTTAGGTGCTTTGCCAACTTTGGAGCTCTTAGATTTTCTGAACCTATTAGAACGCTTGCAGAAAGCATGGTTGATCGGATGGTGAAGCATAGTTCCCAAAGTGGTGGGAAATATGTTTCAGTGCATCTTCGTTTTGAGGAGGTATTATAAAATATCTTTGTACTCGTGCGTTTAGATTTACTAGATACATTATTTATGCAGAATGGATATGCAAAACTGAAGATAATCAATGTTAAGTTCGTTTTTGATAATATAGGGATTTTATGTTTTTGTAGATACTAGATAATTTATTTTATTTTGGCTTTAGTATTTAACTGGAGATTGAGTAGATGCCTACTATATGATTATAATTTACAAATACCCAATTGATTGCTATGTATTGATGTCTTTTGCATAGACTATTGTCAATTTTTATTTTCCGGGTATGTTTTGGTTCCTTGGTTCTACATCAATTGATATTAAGTAATTAAGTCTACGAATTGGGCAAGCACTTCAATTTCAGAATGGGGACGAAAGAGTTAGGTCTGCGTGTTTTCTCTGAATTGGGCAAGGACTTCAGTTTTTTATGTGCCATGAATTCAGACAAAAGACCGGTTTTGATATTGCCAATATTCCTTTCTGCTGGTAGCAAAGCATATATCAAGGGCAACAAATACAATACCAATCTCAGGCTTCTGTCATTAGAGAGGAGGTGATAAATGCTTGTTGAACCTCTTGGAATAGTACAAGATGTTACCTCTCCAGAGTAGAGTTAATCCAGCGGGGGGGTGATGATGTAGAATGCATAAGAATAAAGTTTGGATAATTTAGGTTATTCTCAGTTGTAATAATTTAATGATTATGCCTTATATTTAAACTTAAAAATAGAAATAAGTTTTTGTGTATTTGATGGTAGTAGACCACAAGTCTGGTATATGATTATGAATATGCTATTTTCAATTTTCACATGCGTTCCGTGTGTGTTTGGTTAGCTCTGCGTCAATTATATATAACAGTTTTTTCTGTGCATGAAGGATATGGTTGCATTTTCATGTTGTGAGTATGACGGTGGGGCAGAGGAGAAACGTGAAATGGATATCGCTCGTGAAAGGAGTTGGCGAGGTAAATTCAAAAGAAAGCATAGGATAATAAAGCCTGGTGCAAATCGGGTGGATGGAAGATGTCCTTTGACTCCGTTGGAGGTATGCACTTAATTTTTTTTTTCCTTCCTTTCTTAGGATTCCTAAAAAAGGGCAACCCGGTGCACTGAAGCTCCCGCATATGCAGGGTCCGGGAAGGGGTCCCACCATTTGGTGTATTGTACGCAGCCTTACCCTGTTTTTTACACAAGAGGCTGTTTCCAGGACTTGAACCCGTGACCTTTCGGTCACATGACAACAACTTTACCAGTTGCGCCAAGGTTACACAAGAGGCTGTTTCTTAGGATTCCTATCTCCTTCATATTTGAAGCTCATTTTATTTGATGCTGCAGGTAGGGATGATGCTTAGAGGCATGGGCTTCGATAATACCACCTTAGTATATGTTGCAGCTGGAAAAATTTATAAAGAACAAAAGTACATGTCACCACTTAAACAGATGTTTCCACGATTACAAACAAAAGATACACTGGCAACTCCAGAAGAGCTTGCTCAATTTAAGGTATTTGAGAAGTTATTTATGCTCATTTATTCTGTAAGGGAATTCCAGGAGAATGGAATTTGTGACACGTGTGTTTATGATGCAGGGCCACTCATCTAGGTTGGCTGCTCTTGATTATACTGTTTGTCTTCATAGTGAAGTATTTGTTACAACTCAAGGTGGAAATTTTCCTCACTTCTTGATGGGTCACAGGAGATATATGTATGGTGGGCATTCAAAGACAATTAAACCTGATAAAAGAAGATTGGCTCTATTATTCGATAACCCTAACATAAGGTACAGCTTTGACTATCTTTAGTGGTTAGTGTCTATTTTTGAAGTTGTATCTTGCACCAGACATTAAAATATTTGAGTAGATGACGACGTTTGATCATTATGGAGGCGTTTGATCCATGTACCCGACCCCATTTAGTGGGATTTGGCTTGGTTCCTGTTGTTGTTGTTGTTGTATGACGAACAATGGGTGGGCTTGTGTGTGTGTGTCTGGTATACGTGAACCATCCTACTAATTTTCAAAATTTTATGATGGATTTTCCACAAATATACTTGGTATGTGTTAGGTTTAGCTCTCTGGACTGTCTTTGTTGCTCTGCTCTTGGCTGCTTAGAGCTTTATGGGAGTTGCTATCTCATTTATGGAAAGGATTTAGGCAGTCTTGTTCGATTGTTATATTGCAATACCTTGTATACAGTCCTTGTTTTACGGATGATCTCCCTCAGGACCAGTCCTAAGATTTTTGATGCCCTGGACGAATCAATAAAGTTGCATCCTTTTAATTATTCTAATTTCTTTCTTGTTGCATTTTTTGTTACAAAAGATTCATTCATAATCAAGGTTCTCTAAAATATATTTTCAATAGAATAAATCAAAGCGAGTTAAAAATAAATATATTTATATAGTGCTGACTACTAAGTAAAATAATAATTTTGGTGCAACTAAACAAATGGTGCCCTGGGTTGTCCTCCTCCCGCCCACCCTCAAGGCCACCCCTGATCTCCCTAATTGTACATCCTCTCTTTTCTCTTAATAAAATTTATTTTTCCTTTAAAAGTAACATGGTATGGTTATTTTTATCCTTCTTAGGCTGATTAGAACCTTCGTTTATTCGCTTATCACAAGTACATGTATCTTTCAGAAGTCCCTTCTGGTGGATGCATTTGTAATGTTTGTTGTTTGATATTTATTACTGATTTTGCAGATGGGAAGTATTTAAGCAACAAATGAAAGACATGCTTCGCCATAGTGATCAAAAGGGAACCGAGGTAAAAAAGGCTAGTGAATCCCTATATACTTTTCCCATGCCAGATTGCATGTGTAAACAGGTAGAACCCAAAAATGAAAAAGCTAACATTGGGAAAACCATGAAATTATAAGTGTAAAAGAATTGTCTTTAGGAAATCAAATTGTTCAATAGATGTAATTTCTATCTATATCATCAAGTTATAATTCAAAAAGAAAAGTAGTTTGATTCAAACTTGGAGAAAAGTTGTAACCAAAAAAAAAAAACTTGGAGAAAAGCCATAAACTAAGGTTTCAGTTTTTTTTTTTTTTTTCCTTCTCATTTTCTAGTTAGCTGTGAAATTATAA
Protein sequence

>MS.gene50839.t1

MHGYSRLGRSKSGGLGGVGAGKSSSSKSSSWSKFVYLVMSAIFRRRGLLLFAPLLYIAGMLLYMGSLSFDIVLVSKHHRLPPNPPPPGSLYRSPQLFHNLWPFMLNDSSFSSNNSTSLNVLMKAWSVKEDRQWKPCANKTLPQIEFPKSNGYLIIEANGGLNQQRLSICDAVAVAGLLNATLIIPIFHLNSVWRDSSHFGDIFDENFFIQSLGKHVHVVRELPDDILQQFDNNISNIVNLRVKAWSSPAHYLKKVLPQLLEMRAVRIAPFSNRLAQSVPSKIQGLRCFANFGALRFSEPIRTLAESMVDRMVKHSSQSGGKYVSVHLRFEEDMVAFSCCEYDGGAEEKREMDIARERSWRGKFKRKHRIIKPGANRVDGRCPLTPLEVGMMLRGMGFDNTTLVYVAAGKIYKEQKYMSPLKQMFPRLQTKDTLATPEELAQFKGHSSRLAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRYMYGGHSKTIKPDKRRLALLFDNPNIRWEVFKQQMKDMLRHSDQKGTELAVKL