Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011825.t1 | RHN42265.1 | 97.2 | 597 | 17 | 0 | 1 | 597 | 1 | 597 | 1.4e-308 | 1068.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011825.t1 | Q8GUM4 | 41.2 | 524 | 290 | 7 | 21 | 542 | 21 | 528 | 1.4e-102 | 375.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011825.t1 | A0A396GTZ3 | 97.2 | 597 | 17 | 0 | 1 | 597 | 1 | 597 | 1.0e-308 | 1068.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011825 | MS.gene074163 | PPI |
| MS.gene011825 | MS.gene47071 | PPI |
| MS.gene55433 | MS.gene011825 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011825.t1 | MTR_3g082330 | 42.125 | 546 | 304 | 7 | 11 | 554 | 12 | 547 | 6.28e-145 | 431 |
| MS.gene011825.t1 | MTR_3g082410 | 42.125 | 546 | 304 | 7 | 11 | 554 | 12 | 547 | 5.83e-144 | 428 |
| MS.gene011825.t1 | MTR_7g031900 | 38.420 | 557 | 312 | 10 | 15 | 561 | 13 | 548 | 5.84e-138 | 414 |
| MS.gene011825.t1 | MTR_6g022160 | 39.501 | 481 | 273 | 7 | 82 | 560 | 4 | 468 | 1.24e-118 | 361 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011825.t1 | AT4G37030 | 66.135 | 564 | 189 | 1 | 1 | 562 | 1 | 564 | 0.0 | 766 |
| MS.gene011825.t1 | AT4G12680 | 42.697 | 534 | 282 | 6 | 28 | 552 | 28 | 546 | 8.95e-146 | 434 |
| MS.gene011825.t1 | AT5G40640 | 41.794 | 524 | 287 | 6 | 21 | 542 | 21 | 528 | 2.35e-138 | 415 |
| MS.gene011825.t1 | AT3G27390 | 40.141 | 568 | 316 | 7 | 21 | 586 | 21 | 566 | 3.61e-138 | 414 |
| MS.gene011825.t1 | AT3G27390 | 40.141 | 568 | 316 | 7 | 21 | 586 | 21 | 566 | 3.61e-138 | 414 |
Find 137 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAACGTTGGGGTGATTT+TGG | 0.073856 | 8.1:+27219306 | MS.gene011825:CDS |
| GCTGCTTTGATACTGATTAT+AGG | 0.191136 | 8.1:+27219286 | MS.gene011825:CDS |
| AAACCATCTTCTTTCGATAT+TGG | 0.201377 | 8.1:-27221154 | None:intergenic |
| AGATGTTTCTGAAAAGATTT+TGG | 0.223952 | 8.1:+27222974 | MS.gene011825:CDS |
| AACCATCTTCTTTCGATATT+GGG | 0.229674 | 8.1:-27221153 | None:intergenic |
| CTCTTCCTTGGTGCCATAAA+AGG | 0.236156 | 8.1:+27219093 | MS.gene011825:CDS |
| ATCCAATCTTCTAAAGAATT+AGG | 0.250425 | 8.1:-27219033 | None:intergenic |
| ACCACTTGAGTTGGCTTTGA+TGG | 0.278525 | 8.1:-27222153 | None:intergenic |
| TTCCTAATTCTTTAGAAGAT+TGG | 0.283009 | 8.1:+27219031 | MS.gene011825:CDS |
| TGCCTCTATTATAGTATATC+AGG | 0.289735 | 8.1:+27220749 | MS.gene011825:CDS |
| TTTGGCATATGGTTGGGTTT+AGG | 0.310250 | 8.1:+27219513 | MS.gene011825:CDS |
| AAATTAATTGTTACTTCAAA+AGG | 0.318285 | 8.1:-27219366 | None:intergenic |
| GGCATTATTCACTCATTCAT+TGG | 0.319746 | 8.1:+27222905 | MS.gene011825:CDS |
| CGTAGTTCCTTCAAGTAACT+TGG | 0.327610 | 8.1:-27219967 | None:intergenic |
| GACTATTCAAGAAGTGAAAA+TGG | 0.327988 | 8.1:+27221295 | MS.gene011825:CDS |
| AGGCAATCCAACACCAACTA+TGG | 0.328987 | 8.1:-27222099 | None:intergenic |
| TGCAGGTTAATTCATGTTCC+TGG | 0.330940 | 8.1:+27220477 | MS.gene011825:intron |
| GATAAGAGGCAAGGAATTAT+TGG | 0.352583 | 8.1:+27222010 | MS.gene011825:CDS |
| TGCCAGCTTTGTTTGGCATA+TGG | 0.354484 | 8.1:+27219502 | MS.gene011825:CDS |
| AATATTGTCAAACCAGCAAT+TGG | 0.356494 | 8.1:-27220657 | None:intergenic |
| GAATGAATTGTTAGGATGAT+TGG | 0.364915 | 8.1:+27222822 | MS.gene011825:intron |
| ATTGCTTTGCCAGCTTTGTT+TGG | 0.365895 | 8.1:+27219495 | MS.gene011825:CDS |
| GGCTTTGGTTACACATTCTC+AGG | 0.376208 | 8.1:+27222947 | MS.gene011825:CDS |
| TTGGTTCTTCAATCCGGTTA+TGG | 0.376453 | 8.1:+27222238 | MS.gene011825:CDS |
| AAGGCAGTTGTACTGTGGTT+AGG | 0.385783 | 8.1:+27219914 | MS.gene011825:CDS |
| CAATCCAACAACTTGTCCTT+TGG | 0.390148 | 8.1:-27222218 | None:intergenic |
| TGTTTCCTGCACATGTGGCT+TGG | 0.393525 | 8.1:+27219332 | MS.gene011825:CDS |
| GCTTTGTTTGGCATATGGTT+GGG | 0.393957 | 8.1:+27219507 | MS.gene011825:CDS |
| GATCTTGAAGGAGCTAAGTT+TGG | 0.395219 | 8.1:-27221263 | None:intergenic |
| TGTACCAGCCCTTGAACAAT+AGG | 0.397217 | 8.1:-27220578 | None:intergenic |
| GTTCTTGTTGGTGTTGGGTA+TGG | 0.397301 | 8.1:+27219549 | MS.gene011825:CDS |
| GGTAGTGTTCTTGTTGGTGT+TGG | 0.400483 | 8.1:+27219543 | MS.gene011825:CDS |
| AAGCAGATCAAATACTACTA+TGG | 0.405072 | 8.1:+27221220 | MS.gene011825:CDS |
| TACTGATTATAGGAAACGTT+GGG | 0.405547 | 8.1:+27219296 | MS.gene011825:CDS |
| AAGATCTTTCCGTAGAGGTT+TGG | 0.407048 | 8.1:+27220966 | MS.gene011825:CDS |
| ACAGTTTGTGTCCCAATTGC+TGG | 0.407213 | 8.1:+27220645 | MS.gene011825:CDS |
| TGTCATTGCCAGCATTTCAT+TGG | 0.408938 | 8.1:+27220695 | MS.gene011825:CDS |
| TCCTTGGATTTCAACTTTCG+AGG | 0.417570 | 8.1:+27219581 | MS.gene011825:CDS |
| GTAGTGTTCTTGTTGGTGTT+GGG | 0.422524 | 8.1:+27219544 | MS.gene011825:CDS |
| AGGTTGAAGACTTGGGATAA+TGG | 0.424290 | 8.1:+27222350 | MS.gene011825:CDS |
| ACAGATAAGGGTTATTAAGT+TGG | 0.427835 | 8.1:+27222271 | MS.gene011825:CDS |
| AAGTTTGGCATAAACATTGC+AGG | 0.428463 | 8.1:-27221248 | None:intergenic |
| GGTTCTCAAGGAACAGATAA+GGG | 0.430454 | 8.1:+27222259 | MS.gene011825:CDS |
| AGCTTTGTTTGGCATATGGT+TGG | 0.433383 | 8.1:+27219506 | MS.gene011825:CDS |
| AGGCAGTTGTACTGTGGTTA+GGG | 0.434898 | 8.1:+27219915 | MS.gene011825:CDS |
| TTGATGAATATACGAATGAT+TGG | 0.435343 | 8.1:+27221016 | MS.gene011825:CDS |
| TTCATATCCAAGTTACTTGA+AGG | 0.443666 | 8.1:+27219960 | MS.gene011825:CDS |
| CAAAGGACAAGTTGTTGGAT+TGG | 0.449625 | 8.1:+27222219 | MS.gene011825:CDS |
| GTCTCTCTAACTGATCTTGA+AGG | 0.455805 | 8.1:-27221275 | None:intergenic |
| CGAAACTTCCTTCTGTATGT+TGG | 0.456021 | 8.1:-27222870 | None:intergenic |
| ATCAGTATCAAAGCAGCAAT+AGG | 0.464848 | 8.1:-27219280 | None:intergenic |
| GTTCCTGGATGTGTGATTGT+AGG | 0.467610 | 8.1:+27220492 | MS.gene011825:CDS |
| GTTGGATTGGTTCTTCAATC+CGG | 0.471016 | 8.1:+27222232 | MS.gene011825:CDS |
| CAGACCAAAGGACAAGTTGT+TGG | 0.471091 | 8.1:+27222214 | MS.gene011825:CDS |
| TTAACTCAGGATGGAACCTT+GGG | 0.472086 | 8.1:+27219883 | MS.gene011825:intron |
| TTGGGACACAAACTGTTTCA+AGG | 0.474502 | 8.1:-27220638 | None:intergenic |
| TGTTCCTTGAGAACCATAAC+CGG | 0.474914 | 8.1:-27222251 | None:intergenic |
| AATTAATTGTTACTTCAAAA+GGG | 0.479275 | 8.1:-27219365 | None:intergenic |
| TGAGCAGCTCTAAGACCATC+AGG | 0.483015 | 8.1:-27222386 | None:intergenic |
| GATAAGGGTTATTAAGTTGG+TGG | 0.485743 | 8.1:+27222274 | MS.gene011825:CDS |
| GAAAATAGCCAATGAAATGC+TGG | 0.487880 | 8.1:-27220703 | None:intergenic |
| ACTCGAGGAAACAGTGGGTC+AGG | 0.490749 | 8.1:+27221197 | MS.gene011825:CDS |
| TGGTTCTCAAGGAACAGATA+AGG | 0.493510 | 8.1:+27222258 | MS.gene011825:CDS |
| ATAGCTGGTAGTGTTCTTGT+TGG | 0.494389 | 8.1:+27219537 | MS.gene011825:CDS |
| AATTATGCAGGCTTTATTGT+GGG | 0.495246 | 8.1:+27219256 | MS.gene011825:intron |
| ATGTGTGATTGTAGGGATAG+TGG | 0.496279 | 8.1:+27220500 | MS.gene011825:CDS |
| TGGTTGGGTTTAGGTATAGC+TGG | 0.496915 | 8.1:+27219522 | MS.gene011825:CDS |
| TCAAGTAACTTGGATATGAA+TGG | 0.499939 | 8.1:-27219957 | None:intergenic |
| CAGATCAGTGTAAGACACTA+AGG | 0.500384 | 8.1:+27220004 | MS.gene011825:CDS |
| GAGTCCATACCTATTGTTCA+AGG | 0.501729 | 8.1:+27220569 | MS.gene011825:CDS |
| ACAGTCCAAGCCACATGTGC+AGG | 0.503615 | 8.1:-27219337 | None:intergenic |
| ATGAGGGACTGTGAGATAAG+AGG | 0.507519 | 8.1:+27221996 | MS.gene011825:CDS |
| ACCATCTTCTTTCGATATTG+GGG | 0.508556 | 8.1:-27221152 | None:intergenic |
| TTTAACTCAGGATGGAACCT+TGG | 0.509087 | 8.1:+27219882 | MS.gene011825:intron |
| ATAAACAAAGGTTGAAGACT+TGG | 0.510371 | 8.1:+27222342 | MS.gene011825:CDS |
| CTTAGAGCTGCTCAAATTGA+GGG | 0.513791 | 8.1:+27222395 | MS.gene011825:CDS |
| AACCATATGCCAAACAAAGC+TGG | 0.514652 | 8.1:-27219504 | None:intergenic |
| TATTTGGAGAAAGATCCTTC+TGG | 0.517933 | 8.1:+27223005 | MS.gene011825:CDS |
| ATAGCAATTGCAGTGAATAG+AGG | 0.521061 | 8.1:-27220540 | None:intergenic |
| TCTTAGAGCTGCTCAAATTG+AGG | 0.521338 | 8.1:+27222394 | MS.gene011825:CDS |
| GAAATTCTTGCACTGTATTG+TGG | 0.522001 | 8.1:+27219629 | MS.gene011825:CDS |
| TTCCTGGATGTGTGATTGTA+GGG | 0.525274 | 8.1:+27220493 | MS.gene011825:CDS |
| CAGCAATACACCACTTGAGT+TGG | 0.526106 | 8.1:-27222162 | None:intergenic |
| AACCTGATATACTATAATAG+AGG | 0.530458 | 8.1:-27220751 | None:intergenic |
| AAATTATGCAGGCTTTATTG+TGG | 0.530901 | 8.1:+27219255 | MS.gene011825:intron |
| AGGGTTATTAAGTTGGTGGA+AGG | 0.531476 | 8.1:+27222278 | MS.gene011825:CDS |
| CATGATTTAATCAGCAGAGA+AGG | 0.534133 | 8.1:+27220609 | MS.gene011825:CDS |
| ATCCCTACAATCACACATCC+AGG | 0.534696 | 8.1:-27220495 | None:intergenic |
| ACACAAACTGTTTCAAGGAA+TGG | 0.536385 | 8.1:-27220633 | None:intergenic |
| GAAGCATCCATAGTTGGTGT+TGG | 0.536429 | 8.1:+27222092 | MS.gene011825:CDS |
| GAAGTTTCGTCAAGTCGTTA+AGG | 0.537989 | 8.1:+27222884 | MS.gene011825:CDS |
| CGATATAAGCCAAACCTCTA+CGG | 0.538095 | 8.1:-27220975 | None:intergenic |
| TCAAGAAGTGAAAATGGTGC+AGG | 0.541464 | 8.1:+27221301 | MS.gene011825:CDS |
| TGTGTGATTGTAGGGATAGT+GGG | 0.546317 | 8.1:+27220501 | MS.gene011825:CDS |
| TAAACAAAGGTTGAAGACTT+GGG | 0.547144 | 8.1:+27222343 | MS.gene011825:CDS |
| CAGCCCTTGAACAATAGGTA+TGG | 0.553845 | 8.1:-27220573 | None:intergenic |
| TTTGGCTTATATCGTGGCAA+TGG | 0.553951 | 8.1:+27220984 | MS.gene011825:CDS |
| GGGATTGTTTCCTGCACATG+TGG | 0.554102 | 8.1:+27219327 | MS.gene011825:CDS |
| GTTAACGAAGCATCCATAGT+TGG | 0.554261 | 8.1:+27222086 | MS.gene011825:CDS |
| CAATCCGGTTATGGTTCTCA+AGG | 0.559769 | 8.1:+27222247 | MS.gene011825:CDS |
| GATTGGCTCTATCTTAGAGA+AGG | 0.561467 | 8.1:+27221033 | MS.gene011825:CDS |
| ATATTGTCAAACCAGCAATT+GGG | 0.563293 | 8.1:-27220656 | None:intergenic |
| TCCATCAAAGCCAACTCAAG+TGG | 0.565812 | 8.1:+27222152 | MS.gene011825:CDS |
| ATACTGATTATAGGAAACGT+TGG | 0.566056 | 8.1:+27219295 | MS.gene011825:CDS |
| CATACCTATTGTTCAAGGGC+TGG | 0.568654 | 8.1:+27220574 | MS.gene011825:CDS |
| GGAAGGTGAAGTGAGATACT+TGG | 0.570542 | 8.1:+27222295 | MS.gene011825:CDS |
| GCCCCAATATCGAAAGAAGA+TGG | 0.573372 | 8.1:+27221151 | MS.gene011825:CDS |
| TGACTCATTATCATATCTGA+AGG | 0.575441 | 8.1:-27219604 | None:intergenic |
| GGTAGCTTATTGATTCCTGA+TGG | 0.575995 | 8.1:+27222371 | MS.gene011825:CDS |
| CTTCTGGTAGATCAAGTACA+AGG | 0.577363 | 8.1:+27223021 | MS.gene011825:CDS |
| AGGATGATTGGAATGATAAG+AGG | 0.577930 | 8.1:+27222834 | MS.gene011825:intron |
| ACTGCCTTTGATAGTTCCCA+AGG | 0.580385 | 8.1:-27219899 | None:intergenic |
| CTGGTTTGACAATATTTGTG+TGG | 0.580754 | 8.1:+27220664 | MS.gene011825:CDS |
| GGAACCTTGGGAACTATCAA+AGG | 0.586981 | 8.1:+27219895 | MS.gene011825:CDS |
| ATTGGCTCTATCTTAGAGAA+GGG | 0.594018 | 8.1:+27221034 | MS.gene011825:CDS |
| GCCTCGAAAGTTGAAATCCA+AGG | 0.596159 | 8.1:-27219582 | None:intergenic |
| AATGTATTTCAACAGATATG+GGG | 0.598943 | 8.1:+27221966 | MS.gene011825:intron |
| ATGCTGGCAATGACAACAAG+AGG | 0.599832 | 8.1:-27220687 | None:intergenic |
| TAGGAAAGATCTTTCCGTAG+AGG | 0.600407 | 8.1:+27220961 | MS.gene011825:intron |
| CAAAGCTTCCAACATACAGA+AGG | 0.602294 | 8.1:+27222862 | MS.gene011825:CDS |
| TTTCTACTCGAGGAAACAGT+GGG | 0.608465 | 8.1:+27221192 | MS.gene011825:CDS |
| TAGAGGTTTGGCTTATATCG+TGG | 0.611757 | 8.1:+27220978 | MS.gene011825:CDS |
| CAGCTGCTGATCTTTATGAG+TGG | 0.617272 | 8.1:+27222048 | MS.gene011825:CDS |
| AGTCCATACCTATTGTTCAA+GGG | 0.625840 | 8.1:+27220570 | MS.gene011825:CDS |
| AGATATGGGGAAATATGATG+AGG | 0.632784 | 8.1:+27221979 | MS.gene011825:intron |
| AACTCATTTCAACAGACCAA+AGG | 0.636042 | 8.1:+27222202 | MS.gene011825:CDS |
| GGACTGTGAGATAAGAGGCA+AGG | 0.637968 | 8.1:+27222001 | MS.gene011825:CDS |
| GATATGGGGAAATATGATGA+GGG | 0.644141 | 8.1:+27221980 | MS.gene011825:intron |
| CTTGTACTTGATCTACCAGA+AGG | 0.644969 | 8.1:-27223020 | None:intergenic |
| TTTGGCATAAACATTGCAGG+TGG | 0.646923 | 8.1:-27221245 | None:intergenic |
| GATCTTTATGAGTGGTTGCG+AGG | 0.647291 | 8.1:+27222056 | MS.gene011825:CDS |
| GTCTTACACTGATCTGAACA+AGG | 0.649202 | 8.1:-27219997 | None:intergenic |
| AAATTGAGGGAATTTCCAGA+AGG | 0.670524 | 8.1:+27222408 | MS.gene011825:CDS |
| GTCTGTAGAAGTGAATAACA+AGG | 0.673802 | 8.1:-27222119 | None:intergenic |
| GTTTCCTCGAGTAGAAAACT+CGG | 0.683978 | 8.1:-27221186 | None:intergenic |
| TATCAAAGGCAGTTGTACTG+TGG | 0.686468 | 8.1:+27219909 | MS.gene011825:CDS |
| ACTGATTATAGGAAACGTTG+GGG | 0.698175 | 8.1:+27219297 | MS.gene011825:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTCAAATTTATCTAATAA+CGG | - | chr8.1:27222788-27222807 | None:intergenic | 15.0% |
| !!! | AAAATAATTAAGTGATTTTC+TGG | - | chr8.1:27220900-27220919 | None:intergenic | 15.0% |
| !!! | AAATTAATTGTTACTTCAAA+AGG | - | chr8.1:27219369-27219388 | None:intergenic | 15.0% |
| !!! | AATTAATTGTTACTTCAAAA+GGG | - | chr8.1:27219368-27219387 | None:intergenic | 15.0% |
| !! | AAAATGTATTTCAACAGATA+TGG | + | chr8.1:27221964-27221983 | MS.gene011825:intron | 20.0% |
| !! | AAATGTATTTCAACAGATAT+GGG | + | chr8.1:27221965-27221984 | MS.gene011825:intron | 20.0% |
| !! | AACGTTTATTCCATAAAAAA+AGG | - | chr8.1:27222645-27222664 | None:intergenic | 20.0% |
| !! | ACGTTTATTCCATAAAAAAA+GGG | - | chr8.1:27222644-27222663 | None:intergenic | 20.0% |
| !! | AGTCAAATTTATCTAATAAC+GGG | - | chr8.1:27222787-27222806 | None:intergenic | 20.0% |
| !! | ATATACGATAAGAAAACAAT+TGG | - | chr8.1:27221085-27221104 | None:intergenic | 20.0% |
| !! | ATGAGTACTTATATTGTTTA+TGG | + | chr8.1:27220236-27220255 | MS.gene011825:intron | 20.0% |
| !! | ATTATCAACTTATTAAGGTT+AGG | + | chr8.1:27220098-27220117 | MS.gene011825:intron | 20.0% |
| !! | ATTATTTCAATGTTACATAG+TGG | + | chr8.1:27219694-27219713 | MS.gene011825:intron | 20.0% |
| !! | CAAATTGTGTTTAAATACTA+CGG | + | chr8.1:27221783-27221802 | MS.gene011825:intron | 20.0% |
| !! | GTAACATAAAGTATGAAAAA+GGG | - | chr8.1:27219142-27219161 | None:intergenic | 20.0% |
| !! | GTCATTTCAATTACAAATTT+CGG | + | chr8.1:27220175-27220194 | MS.gene011825:intron | 20.0% |
| !! | TCATTTCAATTACAAATTTC+GGG | + | chr8.1:27220176-27220195 | MS.gene011825:intron | 20.0% |
| !! | TGTAACATAAAGTATGAAAA+AGG | - | chr8.1:27219143-27219162 | None:intergenic | 20.0% |
| !! | TTGAAATGACATAATCAATA+TGG | - | chr8.1:27220165-27220184 | None:intergenic | 20.0% |
| !!! | AAAGATGTTTAAAACTTGTT+CGG | - | chr8.1:27221883-27221902 | None:intergenic | 20.0% |
| !!! | AATGATTGATCTTTTATTGT+TGG | + | chr8.1:27220133-27220152 | MS.gene011825:intron | 20.0% |
| !!! | ATTTTTCTTGAAAATTATGC+AGG | + | chr8.1:27219244-27219263 | MS.gene011825:intron | 20.0% |
| !!! | CAATATTAAGTTGATATGTA+TGG | + | chr8.1:27222486-27222505 | MS.gene011825:intron | 20.0% |
| !!! | TAACATAGTTTTGTTAGAAT+TGG | + | chr8.1:27221634-27221653 | MS.gene011825:intron | 20.0% |
| !!! | TTCTTGATATTTTTCTTGAA+GGG | + | chr8.1:27219213-27219232 | MS.gene011825:intron | 20.0% |
| !!! | TTTCTTGATATTTTTCTTGA+AGG | + | chr8.1:27219212-27219231 | MS.gene011825:intron | 20.0% |
| !!! | TTTTTGGAGTTAATAAACAA+AGG | + | chr8.1:27222330-27222349 | MS.gene011825:CDS | 20.0% |
| !!! | TTTTTTTTTTCATGTGTGTT+TGG | + | chr8.1:27219387-27219406 | MS.gene011825:intron | 20.0% |
| ! | AAAAGAAACGTTATCTTAAC+TGG | - | chr8.1:27220059-27220078 | None:intergenic | 25.0% |
| ! | AAAGTATGAAAAAGGGTAAA+AGG | - | chr8.1:27219135-27219154 | None:intergenic | 25.0% |
| ! | AACCTGATATACTATAATAG+AGG | - | chr8.1:27220754-27220773 | None:intergenic | 25.0% |
| ! | AAGTATGAAAAAGGGTAAAA+GGG | - | chr8.1:27219134-27219153 | None:intergenic | 25.0% |
| ! | AATGTATTTCAACAGATATG+GGG | + | chr8.1:27221966-27221985 | MS.gene011825:intron | 25.0% |
| ! | ACTATAATATTGTTGTGTAG+CGG | + | chr8.1:27219798-27219817 | MS.gene011825:intron | 25.0% |
| ! | ATTGATATAACAATACCTTC+TGG | - | chr8.1:27222426-27222445 | None:intergenic | 25.0% |
| ! | CGCAAATTATCAACTTATTA+AGG | + | chr8.1:27220093-27220112 | MS.gene011825:intron | 25.0% |
| ! | GTAATATATAACCCTAAGTA+GGG | - | chr8.1:27221764-27221783 | None:intergenic | 25.0% |
| ! | TGAAAAAAAACCTATCAACA+TGG | - | chr8.1:27220274-27220293 | None:intergenic | 25.0% |
| ! | TGTAATATATAACCCTAAGT+AGG | - | chr8.1:27221765-27221784 | None:intergenic | 25.0% |
| ! | TTGATGAATATACGAATGAT+TGG | + | chr8.1:27221016-27221035 | MS.gene011825:CDS | 25.0% |
| ! | TTGCAAATAAAAGACATGTT+TGG | - | chr8.1:27220421-27220440 | None:intergenic | 25.0% |
| ! | TTTCATTCTTCATGTATGTT+TGG | + | chr8.1:27222518-27222537 | MS.gene011825:intron | 25.0% |
| !! | AAAGAAAGAAGAACCTTTTA+TGG | - | chr8.1:27219109-27219128 | None:intergenic | 25.0% |
| !! | ATCCAATCTTCTAAAGAATT+AGG | - | chr8.1:27219036-27219055 | None:intergenic | 25.0% |
| !! | ATTTTCTCTAGCATTTTTGT+CGG | + | chr8.1:27220720-27220739 | MS.gene011825:CDS | 25.0% |
| !! | TTCCTAATTCTTTAGAAGAT+TGG | + | chr8.1:27219031-27219050 | MS.gene011825:CDS | 25.0% |
| !! | TTGGAAAAAGTTGTTCTTTT+TGG | + | chr8.1:27222314-27222333 | MS.gene011825:CDS | 25.0% |
| !!! | AATGTTTTTTTTGTGTTTGC+AGG | + | chr8.1:27219433-27219452 | MS.gene011825:intron | 25.0% |
| !!! | ACCAAAATTGATTTTGAATG+AGG | - | chr8.1:27220867-27220886 | None:intergenic | 25.0% |
| !!! | AGATGTTTCTGAAAAGATTT+TGG | + | chr8.1:27222974-27222993 | MS.gene011825:CDS | 25.0% |
| !!! | ATGTTTTTTTTGTGTTTGCA+GGG | + | chr8.1:27219434-27219453 | MS.gene011825:intron | 25.0% |
| !!! | GATTTTGGTTACTCATTATT+TGG | + | chr8.1:27222989-27223008 | MS.gene011825:CDS | 25.0% |
| !!! | TTTTGTTAGAATTGGTTCAA+AGG | + | chr8.1:27221642-27221661 | MS.gene011825:intron | 25.0% |
| AAACCATCTTCTTTCGATAT+TGG | - | chr8.1:27221157-27221176 | None:intergenic | 30.0% | |
| AACCATCTTCTTTCGATATT+GGG | - | chr8.1:27221156-27221175 | None:intergenic | 30.0% | |
| AAGCAGATCAAATACTACTA+TGG | + | chr8.1:27221220-27221239 | MS.gene011825:CDS | 30.0% | |
| AATATTGTCAAACCAGCAAT+TGG | - | chr8.1:27220660-27220679 | None:intergenic | 30.0% | |
| ACAGATAAGGGTTATTAAGT+TGG | + | chr8.1:27222271-27222290 | MS.gene011825:CDS | 30.0% | |
| AGTACCAAATGTTGTAATAG+CGG | + | chr8.1:27219774-27219793 | MS.gene011825:intron | 30.0% | |
| ATAAACAAAGGTTGAAGACT+TGG | + | chr8.1:27222342-27222361 | MS.gene011825:CDS | 30.0% | |
| ATAAACATACACCAAAATGC+TGG | + | chr8.1:27222569-27222588 | MS.gene011825:intron | 30.0% | |
| ATATTGTCAAACCAGCAATT+GGG | - | chr8.1:27220659-27220678 | None:intergenic | 30.0% | |
| ATCATAGATGTCGTGTAATT+TGG | - | chr8.1:27221581-27221600 | None:intergenic | 30.0% | |
| CAATTGGAAGAAGTTTACTT+TGG | - | chr8.1:27221069-27221088 | None:intergenic | 30.0% | |
| CACAAAAAGGTCAAAAAAGA+AGG | - | chr8.1:27220937-27220956 | None:intergenic | 30.0% | |
| GAATGAATTGTTAGGATGAT+TGG | + | chr8.1:27222822-27222841 | MS.gene011825:intron | 30.0% | |
| GACTATTCAAGAAGTGAAAA+TGG | + | chr8.1:27221295-27221314 | MS.gene011825:CDS | 30.0% | |
| GCAATGATGAATGAATTGTT+AGG | + | chr8.1:27222814-27222833 | MS.gene011825:intron | 30.0% | |
| TAAACAAAGGTTGAAGACTT+GGG | + | chr8.1:27222343-27222362 | MS.gene011825:CDS | 30.0% | |
| TAAACATACACCAAAATGCT+GGG | + | chr8.1:27222570-27222589 | MS.gene011825:intron | 30.0% | |
| TATATCAAGACCTAACACTT+AGG | + | chr8.1:27222685-27222704 | MS.gene011825:intron | 30.0% | |
| TATCTGCTTACATTTAACTC+AGG | + | chr8.1:27219870-27219889 | MS.gene011825:intron | 30.0% | |
| TCAAGTAACTTGGATATGAA+TGG | - | chr8.1:27219960-27219979 | None:intergenic | 30.0% | |
| TCGATCACAATACTTCATTT+GGG | + | chr8.1:27221458-27221477 | MS.gene011825:intron | 30.0% | |
| TCTTTCCTACATTCACAAAA+AGG | - | chr8.1:27220950-27220969 | None:intergenic | 30.0% | |
| TGACTCATTATCATATCTGA+AGG | - | chr8.1:27219607-27219626 | None:intergenic | 30.0% | |
| TGCCTCTATTATAGTATATC+AGG | + | chr8.1:27220749-27220768 | MS.gene011825:CDS | 30.0% | |
| TTCATATCCAAGTTACTTGA+AGG | + | chr8.1:27219960-27219979 | MS.gene011825:CDS | 30.0% | |
| ! | ATACTGATTATAGGAAACGT+TGG | + | chr8.1:27219295-27219314 | MS.gene011825:CDS | 30.0% |
| ! | GCATTCTATGTTTGCATTTT+TGG | - | chr8.1:27221677-27221696 | None:intergenic | 30.0% |
| ! | GCCTCATTCAAAATCAATTT+TGG | + | chr8.1:27220863-27220882 | MS.gene011825:intron | 30.0% |
| ! | TACTGATTATAGGAAACGTT+GGG | + | chr8.1:27219296-27219315 | MS.gene011825:CDS | 30.0% |
| ! | TCAATTTTACACTGAGACTT+AGG | - | chr8.1:27220805-27220824 | None:intergenic | 30.0% |
| ! | TGTTTAAAACTTGTTCGGTA+TGG | - | chr8.1:27221878-27221897 | None:intergenic | 30.0% |
| ! | TTTGACCTTTTTGTGAATGT+AGG | + | chr8.1:27220942-27220961 | MS.gene011825:intron | 30.0% |
| !! | AAATTATGCAGGCTTTATTG+TGG | + | chr8.1:27219255-27219274 | MS.gene011825:intron | 30.0% |
| !! | AATTATGCAGGCTTTATTGT+GGG | + | chr8.1:27219256-27219275 | MS.gene011825:intron | 30.0% |
| !!! | TAAGTGATTTTCTGGTTATG+TGG | - | chr8.1:27220892-27220911 | None:intergenic | 30.0% |
| AAATTGAGGGAATTTCCAGA+AGG | + | chr8.1:27222408-27222427 | MS.gene011825:CDS | 35.0% | |
| AACTCATTTCAACAGACCAA+AGG | + | chr8.1:27222202-27222221 | MS.gene011825:CDS | 35.0% | |
| AAGTTTGGCATAAACATTGC+AGG | - | chr8.1:27221251-27221270 | None:intergenic | 35.0% | |
| ACAACTTATGCCATGTTGAT+AGG | + | chr8.1:27220261-27220280 | MS.gene011825:intron | 35.0% | |
| ACACAAACTGTTTCAAGGAA+TGG | - | chr8.1:27220636-27220655 | None:intergenic | 35.0% | |
| ACACTAAGGTAATCATCAAG+CGG | + | chr8.1:27220018-27220037 | MS.gene011825:intron | 35.0% | |
| ACCATCTTCTTTCGATATTG+GGG | - | chr8.1:27221155-27221174 | None:intergenic | 35.0% | |
| ACTGATTATAGGAAACGTTG+GGG | + | chr8.1:27219297-27219316 | MS.gene011825:CDS | 35.0% | |
| AGAATGCACAAGATTTGATC+AGG | + | chr8.1:27221690-27221709 | MS.gene011825:intron | 35.0% | |
| AGATATGGGGAAATATGATG+AGG | + | chr8.1:27221979-27221998 | MS.gene011825:intron | 35.0% | |
| AGATGCTTCAAAAAAGGCTT+TGG | + | chr8.1:27222932-27222951 | MS.gene011825:CDS | 35.0% | |
| AGGATGATTGGAATGATAAG+AGG | + | chr8.1:27222834-27222853 | MS.gene011825:intron | 35.0% | |
| AGTCCATACCTATTGTTCAA+GGG | + | chr8.1:27220570-27220589 | MS.gene011825:CDS | 35.0% | |
| ATAGCAATTGCAGTGAATAG+AGG | - | chr8.1:27220543-27220562 | None:intergenic | 35.0% | |
| ATCAGTATCAAAGCAGCAAT+AGG | - | chr8.1:27219283-27219302 | None:intergenic | 35.0% | |
| CATGATTTAATCAGCAGAGA+AGG | + | chr8.1:27220609-27220628 | MS.gene011825:CDS | 35.0% | |
| CTAGGAGATGTATGCAAAAT+TGG | - | chr8.1:27221723-27221742 | None:intergenic | 35.0% | |
| CTCATAGTTTACTGATACGT+GGG | - | chr8.1:27221855-27221874 | None:intergenic | 35.0% | |
| CTCGATCACAATACTTCATT+TGG | + | chr8.1:27221457-27221476 | MS.gene011825:intron | 35.0% | |
| CTTAACTGGAGTTAAAGCAA+AGG | - | chr8.1:27220045-27220064 | None:intergenic | 35.0% | |
| CTTATTAAGGTTAGGTCGTT+TGG | + | chr8.1:27220106-27220125 | MS.gene011825:intron | 35.0% | |
| GAAAATAGCCAATGAAATGC+TGG | - | chr8.1:27220706-27220725 | None:intergenic | 35.0% | |
| GAAATTCTTGCACTGTATTG+TGG | + | chr8.1:27219629-27219648 | MS.gene011825:CDS | 35.0% | |
| GATAAGAGGCAAGGAATTAT+TGG | + | chr8.1:27222010-27222029 | MS.gene011825:CDS | 35.0% | |
| GATATGGGGAAATATGATGA+GGG | + | chr8.1:27221980-27221999 | MS.gene011825:intron | 35.0% | |
| GGAGAAAGATGCTTCAAAAA+AGG | + | chr8.1:27222926-27222945 | MS.gene011825:CDS | 35.0% | |
| GGCATTATTCACTCATTCAT+TGG | + | chr8.1:27222905-27222924 | MS.gene011825:CDS | 35.0% | |
| GGTACTAAAAATGTGTATCG+CGG | - | chr8.1:27219760-27219779 | None:intergenic | 35.0% | |
| GTCGATGTCAACAGAATAAA+TGG | - | chr8.1:27221109-27221128 | None:intergenic | 35.0% | |
| GTCTGTAGAAGTGAATAACA+AGG | - | chr8.1:27222122-27222141 | None:intergenic | 35.0% | |
| TAAGTTATTCCAAACGTACG+AGG | + | chr8.1:27222758-27222777 | MS.gene011825:intron | 35.0% | |
| TACACGACATCTATGATTTC+AGG | + | chr8.1:27221584-27221603 | MS.gene011825:intron | 35.0% | |
| TCCATAAAAAAAGGGAAGTC+TGG | - | chr8.1:27222636-27222655 | None:intergenic | 35.0% | |
| TGCTTACATTTAACTCAGGA+TGG | + | chr8.1:27219874-27219893 | MS.gene011825:intron | 35.0% | |
| TTTACACTGAGACTTAGGAA+TGG | - | chr8.1:27220800-27220819 | None:intergenic | 35.0% | |
| ! | CTGGTTTGACAATATTTGTG+TGG | + | chr8.1:27220664-27220683 | MS.gene011825:CDS | 35.0% |
| ! | GCTGCTTTGATACTGATTAT+AGG | + | chr8.1:27219286-27219305 | MS.gene011825:CDS | 35.0% |
| ! | TCACATTAGTTCTTCTGAGT+CGG | - | chr8.1:27221506-27221525 | None:intergenic | 35.0% |
| !! | ATGAAGTATTGTGATCGAGT+AGG | - | chr8.1:27221456-27221475 | None:intergenic | 35.0% |
| !! | ATTGGCTCTATCTTAGAGAA+GGG | + | chr8.1:27221034-27221053 | MS.gene011825:CDS | 35.0% |
| !! | GATAAGGGTTATTAAGTTGG+TGG | + | chr8.1:27222274-27222293 | MS.gene011825:CDS | 35.0% |
| !! | TGAAGGTGTTTAGCCAAATA+GGG | - | chr8.1:27222711-27222730 | None:intergenic | 35.0% |
| !!! | ACCAGACTTCCCTTTTTTTA+TGG | + | chr8.1:27222632-27222651 | MS.gene011825:intron | 35.0% |
| AACCATATGCCAAACAAAGC+TGG | - | chr8.1:27219507-27219526 | None:intergenic | 40.0% | |
| AAGATCTTTCCGTAGAGGTT+TGG | + | chr8.1:27220966-27220985 | MS.gene011825:CDS | 40.0% | |
| ACATCAAATTTCTTGCAGCC+AGG | + | chr8.1:27221129-27221148 | MS.gene011825:intron | 40.0% | |
| AGGTTGAAGACTTGGGATAA+TGG | + | chr8.1:27222350-27222369 | MS.gene011825:CDS | 40.0% | |
| ATGTGTGATTGTAGGGATAG+TGG | + | chr8.1:27220500-27220519 | MS.gene011825:CDS | 40.0% | |
| CAAAGCTTCCAACATACAGA+AGG | + | chr8.1:27222862-27222881 | MS.gene011825:CDS | 40.0% | |
| CAAAGGACAAGTTGTTGGAT+TGG | + | chr8.1:27222219-27222238 | MS.gene011825:CDS | 40.0% | |
| CAATCCAACAACTTGTCCTT+TGG | - | chr8.1:27222221-27222240 | None:intergenic | 40.0% | |
| CAGATCAGTGTAAGACACTA+AGG | + | chr8.1:27220004-27220023 | MS.gene011825:CDS | 40.0% | |
| CCTAAACTCTGCTTATTTGC+AGG | + | chr8.1:27220460-27220479 | MS.gene011825:intron | 40.0% | |
| CCTGCAAATAAGCAGAGTTT+AGG | - | chr8.1:27220463-27220482 | None:intergenic | 40.0% | |
| CGAAACTTCCTTCTGTATGT+TGG | - | chr8.1:27222873-27222892 | None:intergenic | 40.0% | |
| CGATATAAGCCAAACCTCTA+CGG | - | chr8.1:27220978-27220997 | None:intergenic | 40.0% | |
| CGTAGTTCCTTCAAGTAACT+TGG | - | chr8.1:27219970-27219989 | None:intergenic | 40.0% | |
| CTTAGAGCTGCTCAAATTGA+GGG | + | chr8.1:27222395-27222414 | MS.gene011825:CDS | 40.0% | |
| CTTCTGGTAGATCAAGTACA+AGG | + | chr8.1:27223021-27223040 | MS.gene011825:CDS | 40.0% | |
| GAAGTTTCGTCAAGTCGTTA+AGG | + | chr8.1:27222884-27222903 | MS.gene011825:CDS | 40.0% | |
| GAGTCCATACCTATTGTTCA+AGG | + | chr8.1:27220569-27220588 | MS.gene011825:CDS | 40.0% | |
| GATCTTGAAGGAGCTAAGTT+TGG | - | chr8.1:27221266-27221285 | None:intergenic | 40.0% | |
| GCTCATAGTTTACTGATACG+TGG | - | chr8.1:27221856-27221875 | None:intergenic | 40.0% | |
| GGTTCTCAAGGAACAGATAA+GGG | + | chr8.1:27222259-27222278 | MS.gene011825:CDS | 40.0% | |
| GTCTCTCTAACTGATCTTGA+AGG | - | chr8.1:27221278-27221297 | None:intergenic | 40.0% | |
| GTCTTACACTGATCTGAACA+AGG | - | chr8.1:27220000-27220019 | None:intergenic | 40.0% | |
| GTTTCCTCGAGTAGAAAACT+CGG | - | chr8.1:27221189-27221208 | None:intergenic | 40.0% | |
| TAGGAAAGATCTTTCCGTAG+AGG | + | chr8.1:27220961-27220980 | MS.gene011825:intron | 40.0% | |
| TATCAAAGGCAGTTGTACTG+TGG | + | chr8.1:27219909-27219928 | MS.gene011825:CDS | 40.0% | |
| TCAACGCAAATTGCAGAAGA+TGG | - | chr8.1:27219839-27219858 | None:intergenic | 40.0% | |
| TCAAGAAGTGAAAATGGTGC+AGG | + | chr8.1:27221301-27221320 | MS.gene011825:CDS | 40.0% | |
| TCAGGGGTAATACTGTAAAC+TGG | - | chr8.1:27221810-27221829 | None:intergenic | 40.0% | |
| TCCTTGGATTTCAACTTTCG+AGG | + | chr8.1:27219581-27219600 | MS.gene011825:CDS | 40.0% | |
| TCTTAGAGCTGCTCAAATTG+AGG | + | chr8.1:27222394-27222413 | MS.gene011825:CDS | 40.0% | |
| TGCAGGTTAATTCATGTTCC+TGG | + | chr8.1:27220477-27220496 | MS.gene011825:intron | 40.0% | |
| TGGTTCTCAAGGAACAGATA+AGG | + | chr8.1:27222258-27222277 | MS.gene011825:CDS | 40.0% | |
| TGTCATTGCCAGCATTTCAT+TGG | + | chr8.1:27220695-27220714 | MS.gene011825:CDS | 40.0% | |
| TGTGTGATTGTAGGGATAGT+GGG | + | chr8.1:27220501-27220520 | MS.gene011825:CDS | 40.0% | |
| TGTTCCTTGAGAACCATAAC+CGG | - | chr8.1:27222254-27222273 | None:intergenic | 40.0% | |
| TTAACTCAGGATGGAACCTT+GGG | + | chr8.1:27219883-27219902 | MS.gene011825:intron | 40.0% | |
| TTCCTGGATGTGTGATTGTA+GGG | + | chr8.1:27220493-27220512 | MS.gene011825:CDS | 40.0% | |
| TTGGGACACAAACTGTTTCA+AGG | - | chr8.1:27220641-27220660 | None:intergenic | 40.0% | |
| TTTAACTCAGGATGGAACCT+TGG | + | chr8.1:27219882-27219901 | MS.gene011825:intron | 40.0% | |
| TTTCTACTCGAGGAAACAGT+GGG | + | chr8.1:27221192-27221211 | MS.gene011825:CDS | 40.0% | |
| TTTGGCATAAACATTGCAGG+TGG | - | chr8.1:27221248-27221267 | None:intergenic | 40.0% | |
| TTTGGCATATGGTTGGGTTT+AGG | + | chr8.1:27219513-27219532 | MS.gene011825:CDS | 40.0% | |
| ! | AAGAACCTTTTATGGCACCA+AGG | - | chr8.1:27219101-27219120 | None:intergenic | 40.0% |
| ! | AGTGCCGCTATTACAACATT+TGG | - | chr8.1:27219781-27219800 | None:intergenic | 40.0% |
| ! | ATAGCTGGTAGTGTTCTTGT+TGG | + | chr8.1:27219537-27219556 | MS.gene011825:CDS | 40.0% |
| ! | GGTATGGATTTTTCACTCCT+TGG | + | chr8.1:27219565-27219584 | MS.gene011825:CDS | 40.0% |
| ! | GTAGTGTTCTTGTTGGTGTT+GGG | + | chr8.1:27219544-27219563 | MS.gene011825:CDS | 40.0% |
| ! | GTTAACGAAGCATCCATAGT+TGG | + | chr8.1:27222086-27222105 | MS.gene011825:CDS | 40.0% |
| ! | TAGAGGTTTGGCTTATATCG+TGG | + | chr8.1:27220978-27220997 | MS.gene011825:CDS | 40.0% |
| ! | TTCTTTTCTGCTCTCTTCCT+TGG | + | chr8.1:27219081-27219100 | MS.gene011825:CDS | 40.0% |
| ! | TTGGTTCTTCAATCCGGTTA+TGG | + | chr8.1:27222238-27222257 | MS.gene011825:CDS | 40.0% |
| ! | TTTGGCTTATATCGTGGCAA+TGG | + | chr8.1:27220984-27221003 | MS.gene011825:CDS | 40.0% |
| ! | TTTTCTACTCGAGGAAACAG+TGG | + | chr8.1:27221191-27221210 | MS.gene011825:CDS | 40.0% |
| !! | AGCTTTGTTTGGCATATGGT+TGG | + | chr8.1:27219506-27219525 | MS.gene011825:CDS | 40.0% |
| !! | AGGGTTATTAAGTTGGTGGA+AGG | + | chr8.1:27222278-27222297 | MS.gene011825:CDS | 40.0% |
| !! | ATTGCTTTGCCAGCTTTGTT+TGG | + | chr8.1:27219495-27219514 | MS.gene011825:CDS | 40.0% |
| !! | CTGAAGGTGTTTAGCCAAAT+AGG | - | chr8.1:27222712-27222731 | None:intergenic | 40.0% |
| !! | GATTGGCTCTATCTTAGAGA+AGG | + | chr8.1:27221033-27221052 | MS.gene011825:CDS | 40.0% |
| !! | GCTTTGTTTGGCATATGGTT+GGG | + | chr8.1:27219507-27219526 | MS.gene011825:CDS | 40.0% |
| !! | GGTAGCTTATTGATTCCTGA+TGG | + | chr8.1:27222371-27222390 | MS.gene011825:CDS | 40.0% |
| !! | GTTGGATTGGTTCTTCAATC+CGG | + | chr8.1:27222232-27222251 | MS.gene011825:CDS | 40.0% |
| AAGGCAGTTGTACTGTGGTT+AGG | + | chr8.1:27219914-27219933 | MS.gene011825:CDS | 45.0% | |
| ACAGTTTGTGTCCCAATTGC+TGG | + | chr8.1:27220645-27220664 | MS.gene011825:CDS | 45.0% | |
| ACGCAAATTGCAGAAGATGG+AGG | - | chr8.1:27219836-27219855 | None:intergenic | 45.0% | |
| AGGCAATCCAACACCAACTA+TGG | - | chr8.1:27222102-27222121 | None:intergenic | 45.0% | |
| AGGCAGTTGTACTGTGGTTA+GGG | + | chr8.1:27219915-27219934 | MS.gene011825:CDS | 45.0% | |
| ATACATCTCCTAGTGCAGAG+TGG | + | chr8.1:27221730-27221749 | MS.gene011825:intron | 45.0% | |
| ATCCCTACAATCACACATCC+AGG | - | chr8.1:27220498-27220517 | None:intergenic | 45.0% | |
| ATGAGGGACTGTGAGATAAG+AGG | + | chr8.1:27221996-27222015 | MS.gene011825:CDS | 45.0% | |
| ATGCTGGCAATGACAACAAG+AGG | - | chr8.1:27220690-27220709 | None:intergenic | 45.0% | |
| CAATCCGGTTATGGTTCTCA+AGG | + | chr8.1:27222247-27222266 | MS.gene011825:CDS | 45.0% | |
| CAGACCAAAGGACAAGTTGT+TGG | + | chr8.1:27222214-27222233 | MS.gene011825:CDS | 45.0% | |
| CAGCAATACACCACTTGAGT+TGG | - | chr8.1:27222165-27222184 | None:intergenic | 45.0% | |
| CAGCCCTTGAACAATAGGTA+TGG | - | chr8.1:27220576-27220595 | None:intergenic | 45.0% | |
| CAGCTGCTGATCTTTATGAG+TGG | + | chr8.1:27222048-27222067 | MS.gene011825:CDS | 45.0% | |
| CATACCTATTGTTCAAGGGC+TGG | + | chr8.1:27220574-27220593 | MS.gene011825:CDS | 45.0% | |
| CCAAATAGGGCCTAAGTGTT+AGG | - | chr8.1:27222698-27222717 | None:intergenic | 45.0% | |
| CCTAACACTTAGGCCCTATT+TGG | + | chr8.1:27222695-27222714 | MS.gene011825:intron | 45.0% | |
| GATCTTTATGAGTGGTTGCG+AGG | + | chr8.1:27222056-27222075 | MS.gene011825:CDS | 45.0% | |
| GCCCCAATATCGAAAGAAGA+TGG | + | chr8.1:27221151-27221170 | MS.gene011825:CDS | 45.0% | |
| GCCTCGAAAGTTGAAATCCA+AGG | - | chr8.1:27219585-27219604 | None:intergenic | 45.0% | |
| GGAACCTTGGGAACTATCAA+AGG | + | chr8.1:27219895-27219914 | MS.gene011825:CDS | 45.0% | |
| GGAAGGTGAAGTGAGATACT+TGG | + | chr8.1:27222295-27222314 | MS.gene011825:CDS | 45.0% | |
| GGCTAAACACCTTCAGACAA+GGG | + | chr8.1:27222716-27222735 | MS.gene011825:intron | 45.0% | |
| GGTAGTGTTCTTGTTGGTGT+TGG | + | chr8.1:27219543-27219562 | MS.gene011825:CDS | 45.0% | |
| GTTCCTGGATGTGTGATTGT+AGG | + | chr8.1:27220492-27220511 | MS.gene011825:CDS | 45.0% | |
| TCCATCAAAGCCAACTCAAG+TGG | + | chr8.1:27222152-27222171 | MS.gene011825:CDS | 45.0% | |
| TGACATAAGCCCTTGTCTGA+AGG | - | chr8.1:27222728-27222747 | None:intergenic | 45.0% | |
| TGGCTAAACACCTTCAGACA+AGG | + | chr8.1:27222715-27222734 | MS.gene011825:intron | 45.0% | |
| TGGTTGGGTTTAGGTATAGC+TGG | + | chr8.1:27219522-27219541 | MS.gene011825:CDS | 45.0% | |
| TGTACCAGCCCTTGAACAAT+AGG | - | chr8.1:27220581-27220600 | None:intergenic | 45.0% | |
| TTACTGATACGTGGGACGAA+AGG | - | chr8.1:27221847-27221866 | None:intergenic | 45.0% | |
| ! | ACTGCCTTTGATAGTTCCCA+AGG | - | chr8.1:27219902-27219921 | None:intergenic | 45.0% |
| ! | AGGAAACGTTGGGGTGATTT+TGG | + | chr8.1:27219306-27219325 | MS.gene011825:CDS | 45.0% |
| ! | GAAGCATCCATAGTTGGTGT+TGG | + | chr8.1:27222092-27222111 | MS.gene011825:CDS | 45.0% |
| ! | GGAAACGTTGGGGTGATTTT+GGG | + | chr8.1:27219307-27219326 | MS.gene011825:CDS | 45.0% |
| ! | GGCTTTGGTTACACATTCTC+AGG | + | chr8.1:27222947-27222966 | MS.gene011825:CDS | 45.0% |
| !! | ACCACTTGAGTTGGCTTTGA+TGG | - | chr8.1:27222156-27222175 | None:intergenic | 45.0% |
| !! | CTCTTCCTTGGTGCCATAAA+AGG | + | chr8.1:27219093-27219112 | MS.gene011825:CDS | 45.0% |
| !! | GTTCTTGTTGGTGTTGGGTA+TGG | + | chr8.1:27219549-27219568 | MS.gene011825:CDS | 45.0% |
| !! | TGCCAGCTTTGTTTGGCATA+TGG | + | chr8.1:27219502-27219521 | MS.gene011825:CDS | 45.0% |
| CTTCTTTCGATATTGGGGCC+TGG | - | chr8.1:27221150-27221169 | None:intergenic | 50.0% | |
| GGACTGTGAGATAAGAGGCA+AGG | + | chr8.1:27222001-27222020 | MS.gene011825:CDS | 50.0% | |
| GGGATTGTTTCCTGCACATG+TGG | + | chr8.1:27219327-27219346 | MS.gene011825:CDS | 50.0% | |
| TGGTTGCAGTGCCCTACTTA+GGG | + | chr8.1:27221750-27221769 | MS.gene011825:intron | 50.0% | |
| TGTTTCCTGCACATGTGGCT+TGG | + | chr8.1:27219332-27219351 | MS.gene011825:CDS | 50.0% | |
| ! | TCGTCCGAGTTTTCTACTCG+AGG | + | chr8.1:27221182-27221201 | MS.gene011825:CDS | 50.0% |
| !! | AACGGGTTACCTCGTACGTT+TGG | - | chr8.1:27222770-27222789 | None:intergenic | 50.0% |
| !! | TGAGCAGCTCTAAGACCATC+AGG | - | chr8.1:27222389-27222408 | None:intergenic | 50.0% |
| ACAGTCCAAGCCACATGTGC+AGG | - | chr8.1:27219340-27219359 | None:intergenic | 55.0% | |
| ACTCGAGGAAACAGTGGGTC+AGG | + | chr8.1:27221197-27221216 | MS.gene011825:CDS | 55.0% | |
| CACTGCAACCACTCTGCACT+AGG | - | chr8.1:27221741-27221760 | None:intergenic | 55.0% | |
| CTTCCTAGAACCTGCGCATG+CGG | + | chr8.1:27222597-27222616 | MS.gene011825:intron | 55.0% | |
| GTGGTTGCAGTGCCCTACTT+AGG | + | chr8.1:27221749-27221768 | MS.gene011825:intron | 55.0% | |
| TACCCCTGAACCGTTCTGCA+GGG | + | chr8.1:27221821-27221840 | MS.gene011825:intron | 55.0% | |
| TTACCCCTGAACCGTTCTGC+AGG | + | chr8.1:27221820-27221839 | MS.gene011825:intron | 55.0% | |
| TTCCTAGAACCTGCGCATGC+GGG | + | chr8.1:27222598-27222617 | MS.gene011825:intron | 55.0% | |
| ! | AGGAAGGGGTCCCAGCATTT+TGG | - | chr8.1:27222583-27222602 | None:intergenic | 55.0% |
| !! | CATGCGCAGGTTCTAGGAAG+GGG | - | chr8.1:27222597-27222616 | None:intergenic | 55.0% |
| !! | GCATGCGCAGGTTCTAGGAA+GGG | - | chr8.1:27222598-27222617 | None:intergenic | 55.0% |
| AAGGCCCTGCAGAACGGTTC+AGG | - | chr8.1:27221828-27221847 | None:intergenic | 60.0% | |
| ACTAAAGCTCCCGCATGCGC+AGG | - | chr8.1:27222610-27222629 | None:intergenic | 60.0% | |
| AGGCCCTGCAGAACGGTTCA+GGG | - | chr8.1:27221827-27221846 | None:intergenic | 60.0% | |
| GGACGAAAGGCCCTGCAGAA+CGG | - | chr8.1:27221834-27221853 | None:intergenic | 60.0% | |
| !! | CGCATGCGCAGGTTCTAGGA+AGG | - | chr8.1:27222599-27222618 | None:intergenic | 60.0% |
| CTCCCGCATGCGCAGGTTCT+AGG | - | chr8.1:27222603-27222622 | None:intergenic | 65.0% | |
| GGCCCTGCAGAACGGTTCAG+GGG | - | chr8.1:27221826-27221845 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 27219021 | 27223079 | 27219021 | ID=MS.gene011825 |
| chr8.1 | mRNA | 27219021 | 27223079 | 27219021 | ID=MS.gene011825.t1;Parent=MS.gene011825 |
| chr8.1 | exon | 27219021 | 27219114 | 27219021 | ID=MS.gene011825.t1.exon1;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27219021 | 27219114 | 27219021 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27219266 | 27219374 | 27219266 | ID=MS.gene011825.t1.exon2;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27219266 | 27219374 | 27219266 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27219455 | 27219650 | 27219455 | ID=MS.gene011825.t1.exon3;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27219455 | 27219650 | 27219455 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27219892 | 27220025 | 27219892 | ID=MS.gene011825.t1.exon4;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27219892 | 27220025 | 27219892 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27220482 | 27220770 | 27220482 | ID=MS.gene011825.t1.exon5;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27220482 | 27220770 | 27220482 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27220964 | 27221070 | 27220964 | ID=MS.gene011825.t1.exon6;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27220964 | 27221070 | 27220964 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27221151 | 27221322 | 27221151 | ID=MS.gene011825.t1.exon7;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27221151 | 27221322 | 27221151 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27221981 | 27222429 | 27221981 | ID=MS.gene011825.t1.exon8;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27221981 | 27222429 | 27221981 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| chr8.1 | exon | 27222836 | 27223079 | 27222836 | ID=MS.gene011825.t1.exon9;Parent=MS.gene011825.t1 |
| chr8.1 | CDS | 27222836 | 27223079 | 27222836 | ID=cds.MS.gene011825.t1;Parent=MS.gene011825.t1 |
| Gene Sequence |
| Protein sequence |
