Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012680.t1 | XP_003610495.1 | 97.6 | 542 | 13 | 0 | 1 | 542 | 1 | 542 | 0.00E+00 | 1076.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012680.t1 | Q94CF0 | 75.4 | 536 | 129 | 1 | 10 | 542 | 10 | 545 | 9.6e-244 | 844.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012680.t1 | G7JKG5 | 97.6 | 542 | 13 | 0 | 1 | 542 | 1 | 542 | 0.0e+00 | 1076.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93693 | MS.gene012680 | PPI |
| MS.gene012680 | MS.gene63806 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012680.t1 | MTR_4g132840 | 97.601 | 542 | 13 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1099 |
| MS.gene012680.t1 | MTR_2g025180 | 80.712 | 534 | 100 | 1 | 12 | 542 | 7 | 540 | 0.0 | 912 |
| MS.gene012680.t1 | MTR_5g093720 | 76.022 | 538 | 124 | 2 | 8 | 542 | 8 | 543 | 0.0 | 848 |
| MS.gene012680.t1 | MTR_3g054130 | 72.897 | 535 | 137 | 3 | 10 | 541 | 13 | 542 | 0.0 | 802 |
| MS.gene012680.t1 | MTR_3g054210 | 80.519 | 385 | 73 | 1 | 155 | 539 | 54 | 436 | 0.0 | 662 |
| MS.gene012680.t1 | MTR_5g093720 | 75.452 | 387 | 90 | 2 | 8 | 391 | 8 | 392 | 0.0 | 597 |
| MS.gene012680.t1 | MTR_3g115640 | 42.857 | 84 | 48 | 0 | 15 | 98 | 6 | 89 | 4.83e-14 | 75.9 |
| MS.gene012680.t1 | MTR_5g099170 | 30.247 | 162 | 105 | 2 | 10 | 168 | 5 | 161 | 5.38e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012680.t1 | AT4G05520 | 74.535 | 538 | 133 | 2 | 8 | 542 | 9 | 545 | 0.0 | 851 |
| MS.gene012680.t1 | AT4G05520 | 74.302 | 537 | 135 | 2 | 8 | 542 | 9 | 544 | 0.0 | 850 |
| MS.gene012680.t1 | AT3G20290 | 73.849 | 543 | 125 | 2 | 10 | 542 | 10 | 545 | 0.0 | 840 |
| MS.gene012680.t1 | AT3G20290 | 73.849 | 543 | 125 | 2 | 10 | 542 | 10 | 545 | 0.0 | 840 |
| MS.gene012680.t1 | AT3G20290 | 73.849 | 543 | 125 | 2 | 10 | 542 | 10 | 545 | 0.0 | 840 |
| MS.gene012680.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 2.07e-14 | 77.0 |
| MS.gene012680.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 2.15e-14 | 77.0 |
| MS.gene012680.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 2.18e-14 | 77.0 |
| MS.gene012680.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 2.29e-14 | 77.0 |
| MS.gene012680.t1 | AT1G20760 | 29.936 | 157 | 98 | 4 | 13 | 157 | 5 | 161 | 2.86e-13 | 73.2 |
Find 106 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAGCTCATGAGAGTTTA+TGG | 0.160965 | 8.1:-1424447 | MS.gene012680:intron |
| CCAACAAAGCCTTCATTTAT+AGG | 0.188899 | 8.1:+1424011 | None:intergenic |
| CGACCGTCACACGCCTTTCT+TGG | 0.227930 | 8.1:+1423924 | None:intergenic |
| AATGCCCAACCTGATGTATT+TGG | 0.273045 | 8.1:-1426250 | MS.gene012680:intron |
| ATATATACACGTACAACTTC+TGG | 0.293769 | 8.1:+1424387 | None:intergenic |
| TCTTGAAGATGAATTTAAAA+AGG | 0.293969 | 8.1:-1423628 | MS.gene012680:intron |
| GAAGTTGTACGTGTATATAT+TGG | 0.299728 | 8.1:-1424384 | MS.gene012680:CDS |
| TGGTTCATCATAGCCGATTC+AGG | 0.300088 | 8.1:-1427886 | MS.gene012680:intron |
| CAAACATCACTTACCAATAA+TGG | 0.301165 | 8.1:+1425593 | None:intergenic |
| TGGAGCACTGATGTGGTCTT+TGG | 0.305099 | 8.1:-1424427 | MS.gene012680:CDS |
| TTTAGTGGCCTGACAACTTT+TGG | 0.307719 | 8.1:-1424948 | MS.gene012680:CDS |
| ACTGATGAGAGGAGCATTCC+TGG | 0.309209 | 8.1:-1425002 | MS.gene012680:CDS |
| TTACTTGTTGAGTATCAATT+TGG | 0.313457 | 8.1:+1424563 | None:intergenic |
| TCTCTGAAGTGATCAATATT+AGG | 0.314915 | 8.1:+1423490 | None:intergenic |
| ATTTAGAAATCCTTATGATT+AGG | 0.327594 | 8.1:-1423362 | None:intergenic |
| AAATGATCTCCTTTCAGATT+TGG | 0.327851 | 8.1:-1423955 | MS.gene012680:CDS |
| GAAGGCTTTGTTGGCCCATT+AGG | 0.330059 | 8.1:-1424002 | MS.gene012680:CDS |
| CCTATAAATGAAGGCTTTGT+TGG | 0.345953 | 8.1:-1424011 | MS.gene012680:CDS |
| TTAGCTTTGCCCATCATTGC+AGG | 0.348004 | 8.1:+1423675 | None:intergenic |
| CTAAATTTCTTTAAGAGCTC+TGG | 0.348355 | 8.1:+1423379 | None:intergenic |
| AAACCAATGGTCATGCTTCT+TGG | 0.353013 | 8.1:-1425421 | MS.gene012680:CDS |
| CTTGACACAGGGGCACATAT+TGG | 0.369302 | 8.1:-1425229 | MS.gene012680:intron |
| TGTTTGTTTAATTAGAATAC+AGG | 0.374061 | 8.1:-1426286 | MS.gene012680:intron |
| AATACGCGTTGTGTTGAATA+AGG | 0.381834 | 8.1:-1424590 | MS.gene012680:CDS |
| AAAGTTGTCAGGCCACTAAA+AGG | 0.381997 | 8.1:+1424951 | None:intergenic |
| GACACCCCTGGTGTCCTCTC+TGG | 0.384423 | 8.1:-1424772 | MS.gene012680:CDS |
| CTCATTTCTGTGGGACAGGC+GGG | 0.402719 | 8.1:-1427365 | MS.gene012680:CDS |
| CGGCTATGATGAACCATTGC+TGG | 0.403204 | 8.1:+1427893 | None:intergenic |
| TTGTATAAACCTGCTTGAGC+TGG | 0.410116 | 8.1:+1427698 | None:intergenic |
| GCAGTGACATCAATAATAGA+TGG | 0.412207 | 8.1:-1425686 | MS.gene012680:CDS |
| TTTGAAGCAACTGGTGGAAA+AGG | 0.416156 | 8.1:+1426123 | None:intergenic |
| CGAGTTTGTGAGGATCAAAT+AGG | 0.427269 | 8.1:+1424668 | None:intergenic |
| GGAGCACTGATGTGGTCTTT+GGG | 0.444899 | 8.1:-1424426 | MS.gene012680:CDS |
| TATAATTAGTCATCTTAAGA+TGG | 0.447879 | 8.1:-1423703 | MS.gene012680:CDS |
| CTTTGTTGGCCCATTAGGAC+AGG | 0.454491 | 8.1:-1423997 | MS.gene012680:CDS |
| AAGTTGTACGTGTATATATT+GGG | 0.465764 | 8.1:-1424383 | MS.gene012680:intron |
| AAGAAAGGCGTGTGACGGTC+GGG | 0.466010 | 8.1:-1423922 | MS.gene012680:intron |
| TTTGGTAGATATTCCAAGAA+AGG | 0.467486 | 8.1:-1423937 | MS.gene012680:CDS |
| TCGACAGCTACAGTATTTCC+AGG | 0.474626 | 8.1:+1424984 | None:intergenic |
| TGTATAAACCTGCTTGAGCT+GGG | 0.475887 | 8.1:+1427699 | None:intergenic |
| AATCTGTCAGTCGTGGGCTC+TGG | 0.480066 | 8.1:+1425205 | None:intergenic |
| GATGGAGATGCCTGCAATGA+TGG | 0.484172 | 8.1:-1423685 | MS.gene012680:CDS |
| AGATGAAAACAGTTTCGGAT+TGG | 0.485016 | 8.1:-1427951 | MS.gene012680:CDS |
| GCTAGATGAAATAACATTTG+TGG | 0.485142 | 8.1:-1424794 | MS.gene012680:CDS |
| GCGTCGATTCCTTCCATGAC+TGG | 0.495974 | 8.1:+1426408 | None:intergenic |
| TGTGCTCATTCGAAGAAGAA+TGG | 0.500241 | 8.1:+1427926 | None:intergenic |
| TGCTTCAAAATCTGTAAAGA+AGG | 0.508344 | 8.1:-1426109 | MS.gene012680:intron |
| AGAGTTTGTTACTGCAATGC+AGG | 0.509107 | 8.1:-1427492 | MS.gene012680:intron |
| TGTGGAGCGGTTAAAACCAT+TGG | 0.509696 | 8.1:-1425648 | MS.gene012680:CDS |
| CATGTCTTACCAAATACATC+AGG | 0.511926 | 8.1:+1426241 | None:intergenic |
| AACGATAGGCCTATAAATGA+AGG | 0.512787 | 8.1:-1424020 | MS.gene012680:CDS |
| CTTACCAAATACATCAGGTT+GGG | 0.513555 | 8.1:+1426246 | None:intergenic |
| ATCTTGCAAAACAGGTTCAA+AGG | 0.513723 | 8.1:-1423540 | MS.gene012680:intron |
| TTGCTAAGATGTGAATATCC+AGG | 0.514496 | 8.1:-1425361 | MS.gene012680:intron |
| TCTTGCAAAACAGGTTCAAA+GGG | 0.520886 | 8.1:-1423539 | MS.gene012680:intron |
| ACAGCTCATTTCTGTGGGAC+AGG | 0.521260 | 8.1:-1427369 | MS.gene012680:intron |
| CAACGAAGTTATGATTTCAC+TGG | 0.522621 | 8.1:-1424733 | MS.gene012680:CDS |
| ATCATAGGTTTGGGCTATTG+CGG | 0.524238 | 8.1:-1427546 | MS.gene012680:intron |
| TAGCATCATTTCCACTGATA+CGG | 0.530170 | 8.1:+1427755 | None:intergenic |
| CAAGAAAGGCGTGTGACGGT+CGG | 0.530982 | 8.1:-1423923 | MS.gene012680:CDS |
| ACGAACTACCAAAAGTTGTC+AGG | 0.533920 | 8.1:+1424940 | None:intergenic |
| AATCGATAAGTGACCTCCAA+TGG | 0.536634 | 8.1:+1425632 | None:intergenic |
| AACATACAGCTCATTTCTGT+GGG | 0.538922 | 8.1:-1427374 | MS.gene012680:intron |
| TAACATACAGCTCATTTCTG+TGG | 0.543650 | 8.1:-1427375 | MS.gene012680:intron |
| AGGGAGTTTCATCTGCCAGC+TGG | 0.548527 | 8.1:-1423520 | MS.gene012680:CDS |
| TGACCAAGAAGCATGACCAT+TGG | 0.549477 | 8.1:+1425418 | None:intergenic |
| CTTCTTGGTCAATATTCCAC+AGG | 0.551134 | 8.1:-1425406 | MS.gene012680:CDS |
| AAAGATCAAACTTCCAGTCA+TGG | 0.553680 | 8.1:-1426421 | MS.gene012680:CDS |
| CAAGCTGTAGATGACATGCT+TGG | 0.556132 | 8.1:-1423412 | MS.gene012680:CDS |
| TGACAGATTTGTTGCTGTCA+TGG | 0.556604 | 8.1:-1425191 | MS.gene012680:intron |
| TGCAATGATGGGCAAAGCTA+AGG | 0.558316 | 8.1:-1423673 | MS.gene012680:CDS |
| GATGGAGATGGCCGTATCAG+TGG | 0.562870 | 8.1:-1427766 | MS.gene012680:CDS |
| AGCAACAAATCTGTCAGTCG+TGG | 0.568117 | 8.1:+1425198 | None:intergenic |
| GCTCATTTCTGTGGGACAGG+CGG | 0.569244 | 8.1:-1427366 | MS.gene012680:CDS |
| ATTTCACTGGTGTTATATCG+TGG | 0.572590 | 8.1:-1424720 | MS.gene012680:CDS |
| ATGGAGATGCCTGCAATGAT+GGG | 0.573266 | 8.1:-1423684 | MS.gene012680:CDS |
| ATCAAACTTCCAGTCATGGA+AGG | 0.574841 | 8.1:-1426417 | MS.gene012680:CDS |
| GGAGCGGTTAAAACCATTGG+AGG | 0.579905 | 8.1:-1425645 | MS.gene012680:CDS |
| CAGTGACATCAATAATAGAT+GGG | 0.583352 | 8.1:-1425685 | MS.gene012680:CDS |
| TCTTACCAAATACATCAGGT+TGG | 0.584546 | 8.1:+1426245 | None:intergenic |
| GTTTGTTTAATTAGAATACA+GGG | 0.584681 | 8.1:-1426285 | MS.gene012680:intron |
| GCAACTGGTGGAAAAGGCCG+AGG | 0.585876 | 8.1:+1426129 | None:intergenic |
| TATAAACCTGCTTGAGCTGG+GGG | 0.587511 | 8.1:+1427701 | None:intergenic |
| ATTCCAAGAAAGGCGTGTGA+CGG | 0.590078 | 8.1:-1423927 | MS.gene012680:CDS |
| GTATAAACCTGCTTGAGCTG+GGG | 0.592484 | 8.1:+1427700 | None:intergenic |
| ATATTAGGAAAATCACCAGC+TGG | 0.597150 | 8.1:+1423505 | None:intergenic |
| ACATTGAAACGTACCAGCAA+TGG | 0.600140 | 8.1:-1427906 | MS.gene012680:CDS |
| ATAACATTTGTGGACACCCC+TGG | 0.602613 | 8.1:-1424784 | MS.gene012680:CDS |
| TCATTTCTGTGGGACAGGCG+GGG | 0.609400 | 8.1:-1427364 | MS.gene012680:CDS |
| TCACTGATGTCGAGTTTGTG+AGG | 0.613213 | 8.1:+1424658 | None:intergenic |
| TGGGTTGAAGAAATTGTATG+TGG | 0.618187 | 8.1:-1425666 | MS.gene012680:CDS |
| GAATATCTACCAAATCTGAA+AGG | 0.620381 | 8.1:+1423946 | None:intergenic |
| TTTAGCATCAAAATCACTGT+CGG | 0.628300 | 8.1:+1425441 | None:intergenic |
| GCAACAAATCTGTCAGTCGT+GGG | 0.631768 | 8.1:+1425199 | None:intergenic |
| TGAAGAAATTGTATGTGGAG+CGG | 0.633851 | 8.1:-1425661 | MS.gene012680:CDS |
| GCAAAGCTAAGGTGCAACAA+AGG | 0.634595 | 8.1:-1423662 | MS.gene012680:CDS |
| ACTTAGGTACTGATCAGCCT+CGG | 0.636844 | 8.1:-1426146 | MS.gene012680:intron |
| TTCTCCAGAGAGGACACCAG+GGG | 0.637406 | 8.1:+1424768 | None:intergenic |
| TGTAGTCTGGAACTGATGAG+AGG | 0.669559 | 8.1:-1425013 | MS.gene012680:intron |
| TGATTGATGGTAGATGGAGA+TGG | 0.672828 | 8.1:-1427778 | MS.gene012680:intron |
| TTTCTCCAGAGAGGACACCA+GGG | 0.678570 | 8.1:+1424767 | None:intergenic |
| ATTGATGTCACTGCACTGAG+AGG | 0.682164 | 8.1:+1425695 | None:intergenic |
| ATTGCGGATACTAAGAGACA+AGG | 0.684993 | 8.1:-1427530 | MS.gene012680:CDS |
| TAATATTGATCACTTCAGAG+AGG | 0.691370 | 8.1:-1423488 | MS.gene012680:CDS |
| GAGTTTATGGAGCACTGATG+TGG | 0.700795 | 8.1:-1424434 | MS.gene012680:CDS |
| CGAGTGATTTACTCTCTACG+CGG | 0.776293 | 8.1:-1424625 | MS.gene012680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAATTGATATTACTT+AGG | - | chr8.1:1425150-1425169 | MS.gene012680:intron | 10.0% |
| !!! | TTAATATAGATAATTTTTCA+TGG | + | chr8.1:1424147-1424166 | None:intergenic | 10.0% |
| !! | ATGAAAATACAAACAAATAA+AGG | + | chr8.1:1427503-1427522 | None:intergenic | 15.0% |
| !! | TCTTAAATAATTGTTGAAAT+GGG | - | chr8.1:1424651-1424670 | MS.gene012680:CDS | 15.0% |
| !!! | AATTTTTTATTTGCTTTCAT+AGG | + | chr8.1:1425273-1425292 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTATTAATGACA+TGG | - | chr8.1:1425101-1425120 | MS.gene012680:intron | 15.0% |
| !!! | TTTTATATTATTTTTAGACC+TGG | - | chr8.1:1427423-1427442 | MS.gene012680:intron | 15.0% |
| !! | AAAATTGAAGTTAAACTGAA+GGG | + | chr8.1:1424790-1424809 | None:intergenic | 20.0% |
| !! | AAAGATATAAAAAAACTCAC+TGG | + | chr8.1:1426433-1426452 | None:intergenic | 20.0% |
| !! | AAATTAGAAAAACAAGTTGT+CGG | + | chr8.1:1426815-1426834 | None:intergenic | 20.0% |
| !! | AGGTAATACAAGATTAATAA+AGG | + | chr8.1:1426059-1426078 | None:intergenic | 20.0% |
| !! | CAACTGAAATTAATAGAAAT+GGG | + | chr8.1:1424864-1424883 | None:intergenic | 20.0% |
| !! | GAAAAAGAAAAAGTGATAAT+TGG | + | chr8.1:1423506-1423525 | None:intergenic | 20.0% |
| !! | GTATATAATGTATTATCTGT+TGG | - | chr8.1:1424745-1424764 | MS.gene012680:CDS | 20.0% |
| !! | GTCTTAAATAATTGTTGAAA+TGG | - | chr8.1:1424650-1424669 | MS.gene012680:CDS | 20.0% |
| !! | GTTTGTTTAATTAGAATACA+GGG | - | chr8.1:1425027-1425046 | MS.gene012680:intron | 20.0% |
| !! | TAGATTTGATTAACATCTAA+AGG | + | chr8.1:1426180-1426199 | None:intergenic | 20.0% |
| !! | TATAATTAGTCATCTTAAGA+TGG | - | chr8.1:1427609-1427628 | MS.gene012680:intron | 20.0% |
| !! | TCAACTGAAATTAATAGAAA+TGG | + | chr8.1:1424865-1424884 | None:intergenic | 20.0% |
| !! | TCTTGAAGATGAATTTAAAA+AGG | - | chr8.1:1427684-1427703 | MS.gene012680:intron | 20.0% |
| !! | TGTTTGTTTAATTAGAATAC+AGG | - | chr8.1:1425026-1425045 | MS.gene012680:intron | 20.0% |
| !!! | AAAACTTCATTTTGTCAAAA+TGG | + | chr8.1:1425249-1425268 | None:intergenic | 20.0% |
| !!! | AAACTTCATTTTGTCAAAAT+GGG | + | chr8.1:1425248-1425267 | None:intergenic | 20.0% |
| !!! | ACAACTTGTTTTTCTAATTT+TGG | - | chr8.1:1426815-1426834 | MS.gene012680:intron | 20.0% |
| !!! | ATTACTATGCATAAACATTT+TGG | - | chr8.1:1425484-1425503 | MS.gene012680:intron | 20.0% |
| !!! | TCTTTATGCTTTCATAATTT+TGG | - | chr8.1:1427052-1427071 | MS.gene012680:intron | 20.0% |
| !!! | TTGTTTGTATTTTCATTTTC+CGG | - | chr8.1:1427507-1427526 | MS.gene012680:CDS | 20.0% |
| ! | AAGTTGTACGTGTATATATT+GGG | - | chr8.1:1426929-1426948 | MS.gene012680:intron | 25.0% |
| ! | AATATGTAACGAAGAAACTA+AGG | + | chr8.1:1427742-1427761 | None:intergenic | 25.0% |
| ! | AATCCATTAGAAATACAAAC+TGG | + | chr8.1:1425356-1425375 | None:intergenic | 25.0% |
| ! | ACTTAATTGTAACTGAAATG+AGG | + | chr8.1:1423667-1423686 | None:intergenic | 25.0% |
| ! | ATTTATGAACTTTCTCTTGT+TGG | + | chr8.1:1424520-1424539 | None:intergenic | 25.0% |
| ! | CGTTATACATCTATATTTCA+AGG | - | chr8.1:1424561-1424580 | MS.gene012680:intron | 25.0% |
| ! | CTGCTGAATGTAAATAATTT+GGG | - | chr8.1:1424446-1424465 | MS.gene012680:intron | 25.0% |
| ! | GAAAACAAACCAATAAGAAA+AGG | + | chr8.1:1425006-1425025 | None:intergenic | 25.0% |
| ! | GAAAATTGAAGTTAAACTGA+AGG | + | chr8.1:1424791-1424810 | None:intergenic | 25.0% |
| ! | GCAAAATAAGGAAACAAAAA+TGG | + | chr8.1:1427720-1427739 | None:intergenic | 25.0% |
| ! | TAACATCTAAAGGAAATACA+AGG | + | chr8.1:1426170-1426189 | None:intergenic | 25.0% |
| ! | TAGCTATTAGGCTTAATTAA+TGG | - | chr8.1:1424491-1424510 | MS.gene012680:intron | 25.0% |
| ! | TATTTCTTCATCATAGGTTT+GGG | - | chr8.1:1423757-1423776 | MS.gene012680:intron | 25.0% |
| ! | TCTGCTGAATGTAAATAATT+TGG | - | chr8.1:1424445-1424464 | MS.gene012680:intron | 25.0% |
| ! | TGAATGTAAATAATTTGGGA+TGG | - | chr8.1:1424450-1424469 | MS.gene012680:intron | 25.0% |
| !! | AATTTTTCATGGAACAATAG+TGG | + | chr8.1:1424136-1424155 | None:intergenic | 25.0% |
| !! | ATTACTGTAGCAATTTTTCA+TGG | - | chr8.1:1424226-1424245 | MS.gene012680:intron | 25.0% |
| !! | ATTTCCTATTTCTTCATCAT+AGG | - | chr8.1:1423751-1423770 | MS.gene012680:CDS | 25.0% |
| !! | TAAACAAAACTGTTCCTTTT+GGG | - | chr8.1:1426198-1426217 | MS.gene012680:intron | 25.0% |
| !! | TGAACTTACTTTCTGTTTTA+AGG | + | chr8.1:1423994-1424013 | None:intergenic | 25.0% |
| !! | TGATTTTGTATCTCCATTAT+TGG | - | chr8.1:1425706-1425725 | MS.gene012680:intron | 25.0% |
| !! | TTACTTGTTGAGTATCAATT+TGG | + | chr8.1:1426752-1426771 | None:intergenic | 25.0% |
| !!! | ATGACATCATATTTTAGAAC+CGG | + | chr8.1:1427529-1427548 | None:intergenic | 25.0% |
| !!! | CTTTCATAATTTTGGTGAAA+AGG | - | chr8.1:1427060-1427079 | MS.gene012680:intron | 25.0% |
| !!! | GTCTTTTTTTATTTGTAGTC+TGG | - | chr8.1:1426286-1426305 | MS.gene012680:intron | 25.0% |
| !!! | GTTCTAAAATATGATGTCAT+TGG | - | chr8.1:1427529-1427548 | MS.gene012680:CDS | 25.0% |
| !!! | TTGTTGATTCCTTTTCTTAT+TGG | - | chr8.1:1424994-1425013 | MS.gene012680:CDS | 25.0% |
| !!! | TTTTCGTTTTCATTGATTGA+TGG | - | chr8.1:1423521-1423540 | MS.gene012680:CDS | 25.0% |
| AAGGAAACAAAAATGGAAGT+AGG | + | chr8.1:1427713-1427732 | None:intergenic | 30.0% | |
| AATATGATGTCATTGGAATG+AGG | - | chr8.1:1427536-1427555 | MS.gene012680:CDS | 30.0% | |
| ACAAGTTGTCGGAAATATTT+AGG | + | chr8.1:1426804-1426823 | None:intergenic | 30.0% | |
| ATAAAAAAACTCACTGGATG+TGG | + | chr8.1:1426427-1426446 | None:intergenic | 30.0% | |
| ATATATACACGTACAACTTC+TGG | + | chr8.1:1426928-1426947 | None:intergenic | 30.0% | |
| CAAACATCACTTACCAATAA+TGG | + | chr8.1:1425722-1425741 | None:intergenic | 30.0% | |
| CAAACCTATGATGAAGAAAT+AGG | + | chr8.1:1423758-1423777 | None:intergenic | 30.0% | |
| CAGTGACATCAATAATAGAT+GGG | - | chr8.1:1425627-1425646 | MS.gene012680:CDS | 30.0% | |
| CTGAAGAATGTCAAATTAAC+TGG | + | chr8.1:1427231-1427250 | None:intergenic | 30.0% | |
| GAAGAAACTAAGGCAAAATA+AGG | + | chr8.1:1427732-1427751 | None:intergenic | 30.0% | |
| GAAGTAGAAAAAACCTGAAT+CGG | + | chr8.1:1423442-1423461 | None:intergenic | 30.0% | |
| GAAGTTGTACGTGTATATAT+TGG | - | chr8.1:1426928-1426947 | MS.gene012680:intron | 30.0% | |
| GAATATCTACCAAATCTGAA+AGG | + | chr8.1:1427369-1427388 | None:intergenic | 30.0% | |
| GCTAGATGAAATAACATTTG+TGG | - | chr8.1:1426518-1426537 | MS.gene012680:intron | 30.0% | |
| GTCATTATGACTAACAAGTT+AGG | - | chr8.1:1425823-1425842 | MS.gene012680:intron | 30.0% | |
| TAATATTGATCACTTCAGAG+AGG | - | chr8.1:1427824-1427843 | MS.gene012680:intron | 30.0% | |
| TATATACTGCTTTGACATAG+TGG | - | chr8.1:1424098-1424117 | MS.gene012680:intron | 30.0% | |
| TCATCAAGATATACACATGA+AGG | + | chr8.1:1426020-1426039 | None:intergenic | 30.0% | |
| TGCTTCAAAATCTGTAAAGA+AGG | - | chr8.1:1425203-1425222 | MS.gene012680:CDS | 30.0% | |
| TTACTATCATCTTGCAAAAC+AGG | - | chr8.1:1427764-1427783 | MS.gene012680:CDS | 30.0% | |
| TTATGATGTTCAATTGCAAC+AGG | + | chr8.1:1427030-1427049 | None:intergenic | 30.0% | |
| TTTACATTCAGCAGATAAAG+AGG | + | chr8.1:1424440-1424459 | None:intergenic | 30.0% | |
| TTTAGCATCAAAATCACTGT+CGG | + | chr8.1:1425874-1425893 | None:intergenic | 30.0% | |
| TTTGGTAGATATTCCAAGAA+AGG | - | chr8.1:1427375-1427394 | MS.gene012680:intron | 30.0% | |
| ! | AAACAAAACTGTTCCTTTTG+GGG | - | chr8.1:1426199-1426218 | MS.gene012680:intron | 30.0% |
| ! | CTAAACAAAACTGTTCCTTT+TGG | - | chr8.1:1426197-1426216 | MS.gene012680:intron | 30.0% |
| ! | CTAAATTTCTTTAAGAGCTC+TGG | + | chr8.1:1427936-1427955 | None:intergenic | 30.0% |
| ! | CTATTTCTTCATCATAGGTT+TGG | - | chr8.1:1423756-1423775 | MS.gene012680:intron | 30.0% |
| ! | GTACCAGTTTGTATTTCTAA+TGG | - | chr8.1:1425350-1425369 | MS.gene012680:intron | 30.0% |
| ! | GTGTATATCTTGATGATAGA+GGG | - | chr8.1:1426024-1426043 | MS.gene012680:intron | 30.0% |
| ! | TAAGACCAGATGATTTTCTT+AGG | + | chr8.1:1424636-1424655 | None:intergenic | 30.0% |
| ! | TCTACAGCTTGAATCATTTT+AGG | + | chr8.1:1427891-1427910 | None:intergenic | 30.0% |
| ! | TGTATATCTTGATGATAGAG+GGG | - | chr8.1:1426025-1426044 | MS.gene012680:intron | 30.0% |
| ! | TGTGTATATCTTGATGATAG+AGG | - | chr8.1:1426023-1426042 | MS.gene012680:intron | 30.0% |
| ! | TTGTTTTCGCATTACGTTAA+TGG | - | chr8.1:1427196-1427215 | MS.gene012680:intron | 30.0% |
| ! | TTTCATTGATTGATGGTAGA+TGG | - | chr8.1:1423528-1423547 | MS.gene012680:CDS | 30.0% |
| !! | ATAATTTTGGTGAAAAGGCT+TGG | - | chr8.1:1427065-1427084 | MS.gene012680:intron | 30.0% |
| !! | ATGTATGCTGAGTTTTAACA+TGG | - | chr8.1:1423866-1423885 | MS.gene012680:intron | 30.0% |
| !! | TCTCTGAAGTGATCAATATT+AGG | + | chr8.1:1427825-1427844 | None:intergenic | 30.0% |
| !! | TGATTTTGATGCTAAACCAA+TGG | - | chr8.1:1425878-1425897 | MS.gene012680:intron | 30.0% |
| !!! | ACTAAGAGACAAGGTTTTTT+AGG | - | chr8.1:1423791-1423810 | MS.gene012680:intron | 30.0% |
| !!! | TATAAATGTTGTTTTGCCTG+TGG | + | chr8.1:1425925-1425944 | None:intergenic | 30.0% |
| !!! | TTTACAGATTTTGAAGCAAC+TGG | + | chr8.1:1425201-1425220 | None:intergenic | 30.0% |
| AAAGATCAAACTTCCAGTCA+TGG | - | chr8.1:1424891-1424910 | MS.gene012680:intron | 35.0% | |
| AACATACAGCTCATTTCTGT+GGG | - | chr8.1:1423938-1423957 | MS.gene012680:CDS | 35.0% | |
| AACGATAGGCCTATAAATGA+AGG | - | chr8.1:1427292-1427311 | MS.gene012680:intron | 35.0% | |
| AATACGCGTTGTGTTGAATA+AGG | - | chr8.1:1426722-1426741 | MS.gene012680:intron | 35.0% | |
| ACAGACCTAAGAAAATCATC+TGG | - | chr8.1:1424628-1424647 | MS.gene012680:CDS | 35.0% | |
| AGGACAGCATAAGCTTAAAT+AGG | + | chr8.1:1427010-1427029 | None:intergenic | 35.0% | |
| ATATTAGGAAAATCACCAGC+TGG | + | chr8.1:1427810-1427829 | None:intergenic | 35.0% | |
| ATCTTGCAAAACAGGTTCAA+AGG | - | chr8.1:1427772-1427791 | MS.gene012680:intron | 35.0% | |
| ATTACCTTACTCTTGACACA+GGG | - | chr8.1:1426072-1426091 | MS.gene012680:intron | 35.0% | |
| CAAAAAGTTCCTGTCCTAAT+GGG | + | chr8.1:1427327-1427346 | None:intergenic | 35.0% | |
| CAAAACAATGTTGTCAATCG+TGG | + | chr8.1:1424355-1424374 | None:intergenic | 35.0% | |
| CAACGAAGTTATGATTTCAC+TGG | - | chr8.1:1426579-1426598 | MS.gene012680:intron | 35.0% | |
| CAAGGTAGTATCATGATTCA+TGG | - | chr8.1:1425793-1425812 | MS.gene012680:intron | 35.0% | |
| CATGTCTTACCAAATACATC+AGG | + | chr8.1:1425074-1425093 | None:intergenic | 35.0% | |
| CCAACAAAGCCTTCATTTAT+AGG | + | chr8.1:1427304-1427323 | None:intergenic | 35.0% | |
| CTTACCAAATACATCAGGTT+GGG | + | chr8.1:1425069-1425088 | None:intergenic | 35.0% | |
| GCAGTGACATCAATAATAGA+TGG | - | chr8.1:1425626-1425645 | MS.gene012680:CDS | 35.0% | |
| GTACTCATTGTGTAGCTATT+AGG | - | chr8.1:1424479-1424498 | MS.gene012680:intron | 35.0% | |
| GTCATGATAAGGATGATGAA+GGG | - | chr8.1:1424394-1424413 | MS.gene012680:CDS | 35.0% | |
| GTTGTCGGAAATATTTAGGT+CGG | + | chr8.1:1426800-1426819 | None:intergenic | 35.0% | |
| TAACATACAGCTCATTTCTG+TGG | - | chr8.1:1423937-1423956 | MS.gene012680:CDS | 35.0% | |
| TAGCATCATTTCCACTGATA+CGG | + | chr8.1:1423560-1423579 | None:intergenic | 35.0% | |
| TATTACCTTACTCTTGACAC+AGG | - | chr8.1:1426071-1426090 | MS.gene012680:intron | 35.0% | |
| TATTACTCATTCGTATGACC+AGG | + | chr8.1:1427444-1427463 | None:intergenic | 35.0% | |
| TCAAAAAGTTCCTGTCCTAA+TGG | + | chr8.1:1427328-1427347 | None:intergenic | 35.0% | |
| TCTTACCAAATACATCAGGT+TGG | + | chr8.1:1425070-1425089 | None:intergenic | 35.0% | |
| TCTTGCAAAACAGGTTCAAA+GGG | - | chr8.1:1427773-1427792 | MS.gene012680:intron | 35.0% | |
| TGAAGAAATTGTATGTGGAG+CGG | - | chr8.1:1425651-1425670 | MS.gene012680:CDS | 35.0% | |
| TGTCAAAATGGGCACAAATT+TGG | + | chr8.1:1425237-1425256 | None:intergenic | 35.0% | |
| TTGAATGAGCTGAAAAGTCA+AGG | + | chr8.1:1427274-1427293 | None:intergenic | 35.0% | |
| TTGCTAAGATGTGAATATCC+AGG | - | chr8.1:1425951-1425970 | MS.gene012680:intron | 35.0% | |
| TTTATAGTATGCTCTTGTGG+CGG | - | chr8.1:1424027-1424046 | MS.gene012680:CDS | 35.0% | |
| ! | AATTTTTCATGGATGGATGC+AGG | - | chr8.1:1424237-1424256 | MS.gene012680:intron | 35.0% |
| ! | CACGATTGACAACATTGTTT+TGG | - | chr8.1:1424353-1424372 | MS.gene012680:intron | 35.0% |
| ! | CCTATAAATGAAGGCTTTGT+TGG | - | chr8.1:1427301-1427320 | MS.gene012680:intron | 35.0% |
| ! | CGTTTTATAGTATGCTCTTG+TGG | - | chr8.1:1424024-1424043 | MS.gene012680:CDS | 35.0% |
| ! | CTCTTTCTTAGCATTTTTGC+AGG | - | chr8.1:1427131-1427150 | MS.gene012680:intron | 35.0% |
| ! | CTGTAGCAATTTTTCATGGA+TGG | - | chr8.1:1424230-1424249 | MS.gene012680:intron | 35.0% |
| ! | GATATCTAATTTTCCGATGC+TGG | - | chr8.1:1425379-1425398 | MS.gene012680:CDS | 35.0% |
| ! | TATCCAGGTTAGTTATGTTG+TGG | - | chr8.1:1425966-1425985 | MS.gene012680:intron | 35.0% |
| ! | TGGGTTGAAGAAATTGTATG+TGG | - | chr8.1:1425646-1425665 | MS.gene012680:CDS | 35.0% |
| ! | TGGTACGCATTTTTACAGAT+TGG | + | chr8.1:1425336-1425355 | None:intergenic | 35.0% |
| ! | TTTTCAGCTCATTCAACGAT+AGG | - | chr8.1:1427278-1427297 | MS.gene012680:intron | 35.0% |
| !! | AGGACAGGAACTTTTTGAAA+AGG | - | chr8.1:1427330-1427349 | MS.gene012680:CDS | 35.0% |
| !! | ATGCTGAGTTTTAACATGGA+TGG | - | chr8.1:1423870-1423889 | MS.gene012680:intron | 35.0% |
| !! | ATTTCACTGGTGTTATATCG+TGG | - | chr8.1:1426592-1426611 | MS.gene012680:intron | 35.0% |
| !! | CTTGGTTGTTGTTGTAGTTT+TGG | - | chr8.1:1427083-1427102 | MS.gene012680:intron | 35.0% |
| !! | TTGCTGTTTCAGTATTCCTT+AGG | + | chr8.1:1424608-1424627 | None:intergenic | 35.0% |
| AAAATCACTGTCGGTCTGAA+AGG | + | chr8.1:1425865-1425884 | None:intergenic | 40.0% | |
| AAACCAATGGTCATGCTTCT+TGG | - | chr8.1:1425891-1425910 | MS.gene012680:intron | 40.0% | |
| AAAGTTGTCAGGCCACTAAA+AGG | + | chr8.1:1426364-1426383 | None:intergenic | 40.0% | |
| AAATCACTGTCGGTCTGAAA+GGG | + | chr8.1:1425864-1425883 | None:intergenic | 40.0% | |
| AATCGATAAGTGACCTCCAA+TGG | + | chr8.1:1425683-1425702 | None:intergenic | 40.0% | |
| AATGCCCAACCTGATGTATT+TGG | - | chr8.1:1425062-1425081 | MS.gene012680:intron | 40.0% | |
| ACACCAAACACGTCATGATA+AGG | - | chr8.1:1424383-1424402 | MS.gene012680:intron | 40.0% | |
| ACATTGAAACGTACCAGCAA+TGG | - | chr8.1:1423406-1423425 | MS.gene012680:CDS | 40.0% | |
| ACGAACTACCAAAAGTTGTC+AGG | + | chr8.1:1426375-1426394 | None:intergenic | 40.0% | |
| ACTTCATGAACCACCTAAAG+AGG | - | chr8.1:1424685-1424704 | MS.gene012680:CDS | 40.0% | |
| AGCTGCAGTATTACAGTACA+GGG | + | chr8.1:1426853-1426872 | None:intergenic | 40.0% | |
| ATCAAACTTCCAGTCATGGA+AGG | - | chr8.1:1424895-1424914 | MS.gene012680:intron | 40.0% | |
| ATCATAGGTTTGGGCTATTG+CGG | - | chr8.1:1423766-1423785 | MS.gene012680:intron | 40.0% | |
| ATGATAAGGATGATGAAGGG+AGG | - | chr8.1:1424397-1424416 | MS.gene012680:CDS | 40.0% | |
| ATGATCTCTAATGCCCCAAA+AGG | + | chr8.1:1426215-1426234 | None:intergenic | 40.0% | |
| ATTGCGGATACTAAGAGACA+AGG | - | chr8.1:1423782-1423801 | MS.gene012680:intron | 40.0% | |
| CAACCACAACATAACTAACC+TGG | + | chr8.1:1425972-1425991 | None:intergenic | 40.0% | |
| CATCCTTATCATGACGTGTT+TGG | + | chr8.1:1424389-1424408 | None:intergenic | 40.0% | |
| CGAGTTTGTGAGGATCAAAT+AGG | + | chr8.1:1426647-1426666 | None:intergenic | 40.0% | |
| CGTCATGATAAGGATGATGA+AGG | - | chr8.1:1424393-1424412 | MS.gene012680:CDS | 40.0% | |
| CTTCATGAACCACCTAAAGA+GGG | - | chr8.1:1424686-1424705 | MS.gene012680:CDS | 40.0% | |
| CTTCTTGGTCAATATTCCAC+AGG | - | chr8.1:1425906-1425925 | MS.gene012680:intron | 40.0% | |
| CTTGCAAATCGCAATTAAGC+TGG | - | chr8.1:1423704-1423723 | MS.gene012680:CDS | 40.0% | |
| GAATGTTAGCAAGAAAGCCA+AGG | + | chr8.1:1425414-1425433 | None:intergenic | 40.0% | |
| GGTGGTTCATGAAGTTTACT+AGG | + | chr8.1:1424680-1424699 | None:intergenic | 40.0% | |
| GTGCACTTCATATGTGAACA+AGG | - | chr8.1:1425775-1425794 | MS.gene012680:intron | 40.0% | |
| GTTGCTCGACTATAAAAGCA+AGG | + | chr8.1:1425314-1425333 | None:intergenic | 40.0% | |
| TCAGTATTCCTTAGGTCTGT+TGG | + | chr8.1:1424600-1424619 | None:intergenic | 40.0% | |
| TGAATCAGATGATGTACGCA+AGG | - | chr8.1:1425443-1425462 | MS.gene012680:CDS | 40.0% | |
| TGTATAAACCTGCTTGAGCT+GGG | + | chr8.1:1423616-1423635 | None:intergenic | 40.0% | |
| TGTGCTCATTCGAAGAAGAA+TGG | + | chr8.1:1423389-1423408 | None:intergenic | 40.0% | |
| TTACCTTACTCTTGACACAG+GGG | - | chr8.1:1426073-1426092 | MS.gene012680:intron | 40.0% | |
| TTGAACCTTAGTGAACACTG+TGG | + | chr8.1:1426258-1426277 | None:intergenic | 40.0% | |
| TTGTATAAACCTGCTTGAGC+TGG | + | chr8.1:1423617-1423636 | None:intergenic | 40.0% | |
| TTGTTCCACAGTGTTCACTA+AGG | - | chr8.1:1426250-1426269 | MS.gene012680:intron | 40.0% | |
| ! | TCCTCTCTGGAGAAAAACAA+AGG | - | chr8.1:1426553-1426572 | MS.gene012680:intron | 40.0% |
| ! | TGATTGATGGTAGATGGAGA+TGG | - | chr8.1:1423534-1423553 | MS.gene012680:intron | 40.0% |
| ! | TTTAGTGGCCTGACAACTTT+TGG | - | chr8.1:1426364-1426383 | MS.gene012680:intron | 40.0% |
| ! | TTTGAAGCAACTGGTGGAAA+AGG | + | chr8.1:1425192-1425211 | None:intergenic | 40.0% |
| ! | TTTTCCGATGCTGGAATGAA+AGG | - | chr8.1:1425388-1425407 | MS.gene012680:CDS | 40.0% |
| !! | AGAGTTTGTTACTGCAATGC+AGG | - | chr8.1:1423820-1423839 | MS.gene012680:intron | 40.0% |
| !! | TGACAGATTTGTTGCTGTCA+TGG | - | chr8.1:1426121-1426140 | MS.gene012680:CDS | 40.0% |
| !!! | ACAGATTTTGAAGCAACTGG+TGG | + | chr8.1:1425198-1425217 | None:intergenic | 40.0% |
| !!! | TCCTTTGTTTTTCTCCAGAG+AGG | + | chr8.1:1426557-1426576 | None:intergenic | 40.0% |
| AAGGCCTTTCATTCCAGCAT+CGG | + | chr8.1:1425395-1425414 | None:intergenic | 45.0% | |
| AATTGCCAACAGAGCAGAAG+TGG | + | chr8.1:1426462-1426481 | None:intergenic | 45.0% | |
| AGCAACAAATCTGTCAGTCG+TGG | + | chr8.1:1426117-1426136 | None:intergenic | 45.0% | |
| ATAACATTTGTGGACACCCC+TGG | - | chr8.1:1426528-1426547 | MS.gene012680:intron | 45.0% | |
| ATGGAGATGCCTGCAATGAT+GGG | - | chr8.1:1427628-1427647 | MS.gene012680:intron | 45.0% | |
| ATGTTGTCAATCGTGGCTAG+CGG | + | chr8.1:1424348-1424367 | None:intergenic | 45.0% | |
| ATTGATGTCACTGCACTGAG+AGG | + | chr8.1:1425620-1425639 | None:intergenic | 45.0% | |
| CAACAGAGCAGAAGTGGAAT+TGG | + | chr8.1:1426456-1426475 | None:intergenic | 45.0% | |
| CAAGCTGTAGATGACATGCT+TGG | - | chr8.1:1427900-1427919 | MS.gene012680:CDS | 45.0% | |
| CAATACTCTCCCTCTTTAGG+TGG | + | chr8.1:1424698-1424717 | None:intergenic | 45.0% | |
| CAATTCCACTTCTGCTCTGT+TGG | - | chr8.1:1426454-1426473 | MS.gene012680:intron | 45.0% | |
| CGAGTGATTTACTCTCTACG+CGG | - | chr8.1:1426687-1426706 | MS.gene012680:intron | 45.0% | |
| CTGCAGCTCATGAGAGTTTA+TGG | - | chr8.1:1426865-1426884 | MS.gene012680:intron | 45.0% | |
| GACCAATACTCTCCCTCTTT+AGG | + | chr8.1:1424701-1424720 | None:intergenic | 45.0% | |
| GACGCATTAGTAGCTGTAAG+TGG | - | chr8.1:1424922-1424941 | MS.gene012680:CDS | 45.0% | |
| GAGCTGCAGTATTACAGTAC+AGG | + | chr8.1:1426854-1426873 | None:intergenic | 45.0% | |
| GCAAAGCTAAGGTGCAACAA+AGG | - | chr8.1:1427650-1427669 | MS.gene012680:intron | 45.0% | |
| GCAACAAATCTGTCAGTCGT+GGG | + | chr8.1:1426116-1426135 | None:intergenic | 45.0% | |
| GCCACTATGTTGTCAAGTAG+CGG | - | chr8.1:1424267-1424286 | MS.gene012680:intron | 45.0% | |
| GCGAAAACAATGTGAAGCAC+AGG | + | chr8.1:1427186-1427205 | None:intergenic | 45.0% | |
| GCTCGACTATAAAAGCAAGG+CGG | + | chr8.1:1425311-1425330 | None:intergenic | 45.0% | |
| GTATAAACCTGCTTGAGCTG+GGG | + | chr8.1:1423615-1423634 | None:intergenic | 45.0% | |
| GTCTGAAAGGGACAAATCAG+AGG | + | chr8.1:1425852-1425871 | None:intergenic | 45.0% | |
| TATAAACCTGCTTGAGCTGG+GGG | + | chr8.1:1423614-1423633 | None:intergenic | 45.0% | |
| TCACTGATGTCGAGTTTGTG+AGG | + | chr8.1:1426657-1426676 | None:intergenic | 45.0% | |
| TCGACAGCTACAGTATTTCC+AGG | + | chr8.1:1426331-1426350 | None:intergenic | 45.0% | |
| TGAAACAGCCAACAGACCTA+AGG | - | chr8.1:1424589-1424608 | MS.gene012680:CDS | 45.0% | |
| TGTGGAGCGGTTAAAACCAT+TGG | - | chr8.1:1425664-1425683 | MS.gene012680:CDS | 45.0% | |
| TTGTCAAGTAGCGGCTATAG+TGG | - | chr8.1:1424276-1424295 | MS.gene012680:intron | 45.0% | |
| ! | ATTCCAAGAAAGGCGTGTGA+CGG | - | chr8.1:1427385-1427404 | MS.gene012680:intron | 45.0% |
| ! | CACCTAAAGAGGGAGAGTAT+TGG | - | chr8.1:1424696-1424715 | MS.gene012680:CDS | 45.0% |
| ! | GATGCTAGCATGCCTTTTAG+TGG | - | chr8.1:1426349-1426368 | MS.gene012680:intron | 45.0% |
| ! | TGACCAAGAAGCATGACCAT+TGG | + | chr8.1:1425897-1425916 | None:intergenic | 45.0% |
| ! | TGGTTCATCATAGCCGATTC+AGG | - | chr8.1:1423426-1423445 | MS.gene012680:CDS | 45.0% |
| ! | TGTAGTCTGGAACTGATGAG+AGG | - | chr8.1:1426299-1426318 | MS.gene012680:intron | 45.0% |
| !! | ACTTAGGTACTGATCAGCCT+CGG | - | chr8.1:1425166-1425185 | MS.gene012680:intron | 45.0% |
| !! | GAGTTTATGGAGCACTGATG+TGG | - | chr8.1:1426878-1426897 | MS.gene012680:intron | 45.0% |
| !! | TGCAATGATGGGCAAAGCTA+AGG | - | chr8.1:1427639-1427658 | MS.gene012680:intron | 45.0% |
| !! | TTAGCTTTGCCCATCATTGC+AGG | + | chr8.1:1427640-1427659 | None:intergenic | 45.0% |
| ACAGCTCATTTCTGTGGGAC+AGG | - | chr8.1:1423943-1423962 | MS.gene012680:CDS | 50.0% | |
| CGGCTATGATGAACCATTGC+TGG | + | chr8.1:1423422-1423441 | None:intergenic | 50.0% | |
| CTTTGTTGGCCCATTAGGAC+AGG | - | chr8.1:1427315-1427334 | MS.gene012680:intron | 50.0% | |
| GATGCTGGAATGAAAGGCCT+TGG | - | chr8.1:1425394-1425413 | MS.gene012680:CDS | 50.0% | |
| GATGGAGATGCCTGCAATGA+TGG | - | chr8.1:1427627-1427646 | MS.gene012680:intron | 50.0% | |
| GCCGCTACTTGACAACATAG+TGG | + | chr8.1:1424271-1424290 | None:intergenic | 50.0% | |
| GGAGCGGTTAAAACCATTGG+AGG | - | chr8.1:1425667-1425686 | MS.gene012680:CDS | 50.0% | |
| TCGTGGCTAGCGGAAAATAG+CGG | + | chr8.1:1424338-1424357 | None:intergenic | 50.0% | |
| TTTCTCCAGAGAGGACACCA+GGG | + | chr8.1:1426548-1426567 | None:intergenic | 50.0% | |
| ! | CTTGACACAGGGGCACATAT+TGG | - | chr8.1:1426083-1426102 | MS.gene012680:intron | 50.0% |
| ! | TTTTCTCCAGAGAGGACACC+AGG | + | chr8.1:1426549-1426568 | None:intergenic | 50.0% |
| !! | ACTGATGAGAGGAGCATTCC+TGG | - | chr8.1:1426310-1426329 | MS.gene012680:intron | 50.0% |
| !! | GAAGGCTTTGTTGGCCCATT+AGG | - | chr8.1:1427310-1427329 | MS.gene012680:intron | 50.0% |
| !! | GGAGCACTGATGTGGTCTTT+GGG | - | chr8.1:1426886-1426905 | MS.gene012680:intron | 50.0% |
| !! | TGGAGCACTGATGTGGTCTT+TGG | - | chr8.1:1426885-1426904 | MS.gene012680:intron | 50.0% |
| AATCTGTCAGTCGTGGGCTC+TGG | + | chr8.1:1426110-1426129 | None:intergenic | 55.0% | |
| AGGGAGTTTCATCTGCCAGC+TGG | - | chr8.1:1427792-1427811 | MS.gene012680:intron | 55.0% | |
| CTCATTTCTGTGGGACAGGC+GGG | - | chr8.1:1423947-1423966 | MS.gene012680:CDS | 55.0% | |
| GATGGAGATGGCCGTATCAG+TGG | - | chr8.1:1423546-1423565 | MS.gene012680:intron | 55.0% | |
| GCTCATTTCTGTGGGACAGG+CGG | - | chr8.1:1423946-1423965 | MS.gene012680:CDS | 55.0% | |
| GTGCCCCTGTGTCAAGAGTA+AGG | + | chr8.1:1426079-1426098 | None:intergenic | 55.0% | |
| TCATTTCTGTGGGACAGGCG+GGG | - | chr8.1:1423948-1423967 | MS.gene012680:CDS | 55.0% | |
| TTCTCCAGAGAGGACACCAG+GGG | + | chr8.1:1426547-1426566 | None:intergenic | 55.0% | |
| ! | AAGAAAGGCGTGTGACGGTC+GGG | - | chr8.1:1427390-1427409 | MS.gene012680:intron | 55.0% |
| ! | CAAGAAAGGCGTGTGACGGT+CGG | - | chr8.1:1427389-1427408 | MS.gene012680:intron | 55.0% |
| !! | GCGTCGATTCCTTCCATGAC+TGG | + | chr8.1:1424907-1424926 | None:intergenic | 55.0% |
| CGACCGTCACACGCCTTTCT+TGG | + | chr8.1:1427391-1427410 | None:intergenic | 60.0% | |
| GCAACTGGTGGAAAAGGCCG+AGG | + | chr8.1:1425186-1425205 | None:intergenic | 60.0% | |
| GACACCCCTGGTGTCCTCTC+TGG | - | chr8.1:1426540-1426559 | MS.gene012680:intron | 65.0% | |
| GAGCTGGGGGCGAGACAAGT+TGG | + | chr8.1:1423601-1423620 | None:intergenic | 65.0% | |
| GTCTCGCCCCCAGCTCAAGC+AGG | - | chr8.1:1423605-1423624 | MS.gene012680:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 1423363 | 1427971 | 1423363 | ID=MS.gene012680 |
| chr8.1 | mRNA | 1423363 | 1427971 | 1423363 | ID=MS.gene012680.t1;Parent=MS.gene012680 |
| chr8.1 | exon | 1427887 | 1427971 | 1427887 | ID=MS.gene012680.t1.exon1;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1427887 | 1427971 | 1427887 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1427708 | 1427787 | 1427708 | ID=MS.gene012680.t1.exon2;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1427708 | 1427787 | 1427708 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1427493 | 1427561 | 1427493 | ID=MS.gene012680.t1.exon3;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1427493 | 1427561 | 1427493 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1427330 | 1427387 | 1427330 | ID=MS.gene012680.t1.exon4;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1427330 | 1427387 | 1427330 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1426398 | 1426453 | 1426398 | ID=MS.gene012680.t1.exon5;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1426398 | 1426453 | 1426398 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1426251 | 1426293 | 1426251 | ID=MS.gene012680.t1.exon6;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1426251 | 1426293 | 1426251 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1426110 | 1426162 | 1426110 | ID=MS.gene012680.t1.exon7;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1426110 | 1426162 | 1426110 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1425607 | 1425720 | 1425607 | ID=MS.gene012680.t1.exon8;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1425607 | 1425720 | 1425607 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1425362 | 1425464 | 1425362 | ID=MS.gene012680.t1.exon9;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1425362 | 1425464 | 1425362 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1425192 | 1425241 | 1425192 | ID=MS.gene012680.t1.exon10;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1425192 | 1425241 | 1425192 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1424902 | 1425030 | 1424902 | ID=MS.gene012680.t1.exon11;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1424902 | 1425030 | 1424902 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1424567 | 1424818 | 1424567 | ID=MS.gene012680.t1.exon12;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1424567 | 1424818 | 1424567 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1424384 | 1424463 | 1424384 | ID=MS.gene012680.t1.exon13;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1424384 | 1424463 | 1424384 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1423923 | 1424049 | 1423923 | ID=MS.gene012680.t1.exon14;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1423923 | 1424049 | 1423923 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1423629 | 1423772 | 1423629 | ID=MS.gene012680.t1.exon15;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1423629 | 1423772 | 1423629 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| chr8.1 | exon | 1423363 | 1423548 | 1423363 | ID=MS.gene012680.t1.exon16;Parent=MS.gene012680.t1 |
| chr8.1 | CDS | 1423363 | 1423548 | 1423363 | ID=cds.MS.gene012680.t1;Parent=MS.gene012680.t1 |
| Gene Sequence |
| Protein sequence |
