Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63806.t1 | XP_003617631.1 | 98.7 | 543 | 7 | 0 | 1 | 543 | 1 | 543 | 0.00E+00 | 1084.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63806.t1 | Q94CF0 | 85.1 | 545 | 79 | 1 | 1 | 543 | 1 | 545 | 1.5e-276 | 953.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63806.t1 | G7K8N7 | 98.7 | 543 | 7 | 0 | 1 | 543 | 1 | 543 | 0.0e+00 | 1084.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63806 | MS.gene00737 | PPI |
| MS.gene68957 | MS.gene63806 | PPI |
| MS.gene63806 | MS.gene25228 | PPI |
| MS.gene042141 | MS.gene63806 | PPI |
| MS.gene012680 | MS.gene63806 | PPI |
| MS.gene63806 | MS.gene68879 | PPI |
| MS.gene63806 | MS.gene28297 | PPI |
| MS.gene003031 | MS.gene63806 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63806.t1 | MTR_5g093720 | 98.711 | 543 | 7 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1109 |
| MS.gene63806.t1 | MTR_3g054130 | 82.472 | 542 | 92 | 2 | 1 | 542 | 4 | 542 | 0.0 | 899 |
| MS.gene63806.t1 | MTR_2g025180 | 79.026 | 534 | 110 | 1 | 12 | 543 | 7 | 540 | 0.0 | 894 |
| MS.gene63806.t1 | MTR_4g132840 | 76.022 | 538 | 124 | 2 | 8 | 543 | 8 | 542 | 0.0 | 860 |
| MS.gene63806.t1 | MTR_5g093720 | 98.214 | 392 | 7 | 0 | 1 | 392 | 1 | 392 | 0.0 | 798 |
| MS.gene63806.t1 | MTR_3g054210 | 83.292 | 401 | 65 | 1 | 140 | 540 | 38 | 436 | 0.0 | 697 |
| MS.gene63806.t1 | MTR_3g115640 | 43.421 | 76 | 43 | 0 | 19 | 94 | 10 | 85 | 7.37e-12 | 68.9 |
| MS.gene63806.t1 | MTR_5g099170 | 36.782 | 87 | 55 | 0 | 10 | 96 | 5 | 91 | 8.67e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63806.t1 | AT3G20290 | 84.771 | 545 | 81 | 1 | 1 | 543 | 1 | 545 | 0.0 | 941 |
| MS.gene63806.t1 | AT3G20290 | 84.771 | 545 | 81 | 1 | 1 | 543 | 1 | 545 | 0.0 | 941 |
| MS.gene63806.t1 | AT3G20290 | 84.771 | 545 | 81 | 1 | 1 | 543 | 1 | 545 | 0.0 | 941 |
| MS.gene63806.t1 | AT4G05520 | 77.037 | 540 | 121 | 2 | 6 | 543 | 7 | 545 | 0.0 | 890 |
| MS.gene63806.t1 | AT4G05520 | 77.180 | 539 | 121 | 2 | 6 | 543 | 7 | 544 | 0.0 | 889 |
| MS.gene63806.t1 | AT1G21630 | 41.489 | 94 | 50 | 1 | 5 | 98 | 4 | 92 | 1.09e-14 | 78.2 |
| MS.gene63806.t1 | AT1G21630 | 41.489 | 94 | 50 | 1 | 5 | 98 | 4 | 92 | 1.11e-14 | 77.8 |
| MS.gene63806.t1 | AT1G21630 | 41.489 | 94 | 50 | 1 | 5 | 98 | 4 | 92 | 1.12e-14 | 77.8 |
| MS.gene63806.t1 | AT1G21630 | 41.489 | 94 | 50 | 1 | 5 | 98 | 4 | 92 | 1.14e-14 | 77.8 |
| MS.gene63806.t1 | AT1G20760 | 35.484 | 93 | 57 | 1 | 19 | 108 | 11 | 103 | 4.20e-12 | 69.7 |
Find 110 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTTGGCAGGTGAATT+TGG | 0.152143 | 5.3:+75623639 | MS.gene63806:CDS |
| CAAACCTATGGTTATGCTTT+TGG | 0.166936 | 5.3:+75621783 | MS.gene63806:CDS |
| CTTCTAAAGGCTTCAACTTC+TGG | 0.183151 | 5.3:-75621566 | None:intergenic |
| TTGCAGCTGATGAGGGTTTA+TGG | 0.205072 | 5.3:+75622771 | MS.gene63806:intron |
| TGACTTTGTCTCCCCATTAT+TGG | 0.230026 | 5.3:+75621605 | MS.gene63806:CDS |
| TAAAATGTAGCTAGTTTCTT+TGG | 0.265116 | 5.3:+75620414 | MS.gene63806:intron |
| AGTAACTTACTGACCAATAA+TGG | 0.275209 | 5.3:-75621618 | None:intergenic |
| ACCTCCCATGTTGGAAGGTT+TGG | 0.279552 | 5.3:+75620667 | MS.gene63806:CDS |
| CATTATCAGTCATCTTAAAA+AGG | 0.279779 | 5.3:+75623569 | MS.gene63806:CDS |
| TGGTTCAATTACGCTGATTC+AGG | 0.282294 | 5.3:+75618562 | MS.gene63806:CDS |
| CCACTGACAGCATCATTTAC+AGG | 0.290703 | 5.3:-75623073 | None:intergenic |
| GTGCTAATAAATTTAATCAT+AGG | 0.295416 | 5.3:-75623916 | None:intergenic |
| TTCAGCAGATCATGTGTTAT+TGG | 0.298372 | 5.3:-75620451 | None:intergenic |
| TTTAGTGGACTTACAACTTT+TGG | 0.313831 | 5.3:+75622275 | MS.gene63806:CDS |
| GATTGTGATGGTCGCATAAC+TGG | 0.314600 | 5.3:+75618673 | MS.gene63806:intron |
| CTAGTTTCTTTGGCACAATC+TGG | 0.324017 | 5.3:+75620424 | MS.gene63806:CDS |
| CAAAGCGACCTGGATGTAAA+TGG | 0.325430 | 5.3:+75620812 | MS.gene63806:CDS |
| GAAGTCACTCGTGTGTATAT+TGG | 0.325748 | 5.3:+75622834 | MS.gene63806:CDS |
| GAAAGTCACCAGGAGGTAAA+TGG | 0.328789 | 5.3:-75623755 | None:intergenic |
| ACCATTGCTGATAAATGTTT+TGG | 0.340440 | 5.3:-75618543 | None:intergenic |
| TCAAAGCGACAAGGTTATCT+AGG | 0.345250 | 5.3:+75620301 | MS.gene63806:CDS |
| TTAAAATTCTTTAAGAGGTT+AGG | 0.355482 | 5.3:-75623888 | None:intergenic |
| CCTGACGAGAGAAGCATTCC+TGG | 0.356472 | 5.3:+75622221 | MS.gene63806:CDS |
| TCAGCAGATCATGTGTTATT+GGG | 0.370095 | 5.3:-75620450 | None:intergenic |
| GATTCTTAAAATTCTTTAAG+AGG | 0.371540 | 5.3:-75623893 | None:intergenic |
| AAAGTTGTAAGTCCACTAAA+TGG | 0.379160 | 5.3:-75622272 | None:intergenic |
| GTAACTTACTGACCAATAAT+GGG | 0.382996 | 5.3:-75621617 | None:intergenic |
| TCCGTGACATCAATAATTGA+TGG | 0.385375 | 5.3:+75621525 | MS.gene63806:CDS |
| TCTCTGAAATGCTCAACATT+TGG | 0.386870 | 5.3:-75623777 | None:intergenic |
| AAGTCACTCGTGTGTATATT+GGG | 0.391300 | 5.3:+75622835 | MS.gene63806:CDS |
| CCAGGAATGCTTCTCTCGTC+AGG | 0.394765 | 5.3:-75622221 | None:intergenic |
| GTCTCGTCAACATCTTAAAC+AGG | 0.395819 | 5.3:+75618732 | MS.gene63806:CDS |
| CTTCGATCACAAGCCGCCTT+TGG | 0.399002 | 5.3:-75623160 | None:intergenic |
| TCAAACAGTTCCTTTCCAAT+TGG | 0.410121 | 5.3:-75623097 | None:intergenic |
| CACTAAATGGCATGTCTGCT+TGG | 0.410612 | 5.3:-75622259 | None:intergenic |
| TCGCGTGATATCATCCTTAC+GGG | 0.420417 | 5.3:+75622598 | MS.gene63806:CDS |
| AAAGGAGATGCCTGCAATGA+TGG | 0.425362 | 5.3:+75623587 | MS.gene63806:CDS |
| CTTCCCGAGTGACCACATTA+AGG | 0.428825 | 5.3:-75622796 | None:intergenic |
| AAGCGGTAAGTAACTTCTAA+AGG | 0.431336 | 5.3:-75621579 | None:intergenic |
| TAAGAGGTTAGGAATGTCAT+AGG | 0.436436 | 5.3:-75623877 | None:intergenic |
| CTGCTTAAATGTAGCTATCC+AGG | 0.436539 | 5.3:+75621844 | MS.gene63806:CDS |
| CTGTCAATAGGTGCACATAT+TGG | 0.436772 | 5.3:+75621969 | MS.gene63806:intron |
| ACAACAAACCTATCAGTTGT+AGG | 0.438184 | 5.3:-75621999 | None:intergenic |
| TGGACAGCAACAGTATTTCC+AGG | 0.441166 | 5.3:-75622239 | None:intergenic |
| GCATAGCAATGATAAACTCT+TGG | 0.443437 | 5.3:-75620327 | None:intergenic |
| CAAGCAGACATGCCATTTAG+TGG | 0.445462 | 5.3:+75622260 | MS.gene63806:CDS |
| TGCTAATAAATTTAATCATA+GGG | 0.452574 | 5.3:-75623915 | None:intergenic |
| ATATACACACGAGTGACTTC+GGG | 0.454681 | 5.3:-75622831 | None:intergenic |
| CTTTGGAGCACGAACCGATT+GGG | 0.457471 | 5.3:-75618516 | None:intergenic |
| CAAAAGCATAACCATAGGTT+TGG | 0.457780 | 5.3:-75621782 | None:intergenic |
| GCTTGTGAGGATCAAACAAT+AGG | 0.458575 | 5.3:-75622553 | None:intergenic |
| AAGCATGTATCTTGGCTGCT+CGG | 0.460644 | 5.3:-75623545 | None:intergenic |
| AGCCATCACTATCAAGTAGT+TGG | 0.461614 | 5.3:+75620939 | MS.gene63806:CDS |
| AAACTAATTGATAATTTGGC+AGG | 0.463679 | 5.3:+75623630 | MS.gene63806:CDS |
| ATCGCGTGATATCATCCTTA+CGG | 0.468258 | 5.3:+75622597 | MS.gene63806:CDS |
| ATTACATTTGTGGACAGTCC+TGG | 0.471784 | 5.3:+75622440 | MS.gene63806:CDS |
| AATATACACACGAGTGACTT+CGG | 0.476072 | 5.3:-75622832 | None:intergenic |
| AACCTATCAGTTGTAGGCTC+TGG | 0.479032 | 5.3:-75621993 | None:intergenic |
| AGAGTTTATCATTGCTATGC+AGG | 0.481694 | 5.3:+75620330 | MS.gene63806:CDS |
| GATGCTGTCAGTGGTCCAAT+TGG | 0.486711 | 5.3:+75623082 | MS.gene63806:CDS |
| ACTGGAGCACATTACATTTG+TGG | 0.493955 | 5.3:+75622430 | MS.gene63806:CDS |
| ACCAAAACATTTATCAGCAA+TGG | 0.494108 | 5.3:+75618542 | MS.gene63806:CDS |
| GAGCACGAACCGATTGGGAT+CGG | 0.494221 | 5.3:-75618511 | None:intergenic |
| GACCAGAGCCTACAACTGAT+AGG | 0.496227 | 5.3:+75621991 | MS.gene63806:CDS |
| GAGTTCGATCCGATCCCAAT+CGG | 0.498703 | 5.3:+75618502 | MS.gene63806:CDS |
| TAGTTTCTTTGGCACAATCT+GGG | 0.500930 | 5.3:+75620425 | MS.gene63806:CDS |
| CATTTCAGAGAGAGCTTGAG+TGG | 0.511652 | 5.3:+75623789 | MS.gene63806:CDS |
| AAGGAGATGCCTGCAATGAT+GGG | 0.518507 | 5.3:+75623588 | MS.gene63806:CDS |
| GATAATGTAAGCATGTATCT+TGG | 0.519127 | 5.3:-75623553 | None:intergenic |
| CCCGATGTTGCAGCTGATGA+GGG | 0.519609 | 5.3:+75622764 | MS.gene63806:intron |
| AGGGAGTTCCATTTACCTCC+TGG | 0.527048 | 5.3:+75623747 | MS.gene63806:CDS |
| AGCATGTATCTTGGCTGCTC+GGG | 0.529896 | 5.3:-75623544 | None:intergenic |
| TATCTTTAAGATCTGAAAGA+AGG | 0.531910 | 5.3:-75623135 | None:intergenic |
| AAATTCAAAACAGGTACAAA+GGG | 0.532909 | 5.3:+75623728 | MS.gene63806:intron |
| CTGAAACCTCCCATGTTGGA+AGG | 0.536185 | 5.3:+75620662 | MS.gene63806:CDS |
| ATATATTACCATTTACATCC+AGG | 0.538105 | 5.3:-75620820 | None:intergenic |
| TGATAGGTTTGTTGTTGTCA+TGG | 0.540376 | 5.3:+75622007 | MS.gene63806:CDS |
| GCCCGATGTTGCAGCTGATG+AGG | 0.545566 | 5.3:+75622763 | MS.gene63806:intron |
| GCCATCAATTATTGATGTCA+CGG | 0.551244 | 5.3:-75621526 | None:intergenic |
| TCTTTGGAGCACGAACCGAT+TGG | 0.552486 | 5.3:-75618517 | None:intergenic |
| TTTGGCAGGTGAATTTGGAA+AGG | 0.553683 | 5.3:+75623644 | MS.gene63806:CDS |
| GGAGCCTTAATGTGGTCACT+CGG | 0.556776 | 5.3:+75622792 | MS.gene63806:CDS |
| CTAGGGCAACTTACAGGATG+AGG | 0.558542 | 5.3:-75622335 | None:intergenic |
| TTTGTCATCATGTCCCCGTA+AGG | 0.562314 | 5.3:-75622612 | None:intergenic |
| AAAATTCAAAACAGGTACAA+AGG | 0.562439 | 5.3:+75623727 | MS.gene63806:intron |
| AAATCTGAAACCTCCCATGT+TGG | 0.564021 | 5.3:+75620658 | MS.gene63806:CDS |
| ATTGATGTCACGGAGGAAAG+TGG | 0.569090 | 5.3:-75621516 | None:intergenic |
| CTTAATGTGGTCACTCGGGA+AGG | 0.569960 | 5.3:+75622797 | MS.gene63806:CDS |
| GAGCCTTAATGTGGTCACTC+GGG | 0.589840 | 5.3:+75622793 | MS.gene63806:CDS |
| TACGTCCAAACCTTCCAACA+TGG | 0.590355 | 5.3:-75620672 | None:intergenic |
| TGACCCAAAAGCATAACCAT+AGG | 0.591304 | 5.3:-75621787 | None:intergenic |
| AACCAACTACTTGATAGTGA+TGG | 0.612642 | 5.3:-75620941 | None:intergenic |
| AAAGCATAAACAAAGCGACC+TGG | 0.615745 | 5.3:+75620802 | MS.gene63806:CDS |
| GGGTTTATGGAGCCTTAATG+TGG | 0.616040 | 5.3:+75622784 | MS.gene63806:CDS |
| TCACTAATATCAAGCTTGTG+AGG | 0.618071 | 5.3:-75622566 | None:intergenic |
| TCAACATTTGGAAAGTCACC+AGG | 0.621326 | 5.3:-75623765 | None:intergenic |
| TCTTAAAGATATACCAAAGG+CGG | 0.626329 | 5.3:+75623147 | MS.gene63806:CDS |
| ACGTCCAAACCTTCCAACAT+GGG | 0.630836 | 5.3:-75620671 | None:intergenic |
| TGTCAGTGGTCCAATTGGAA+AGG | 0.632617 | 5.3:+75623087 | MS.gene63806:CDS |
| TCCAAACCTTCCAACATGGG+AGG | 0.646871 | 5.3:-75620668 | None:intergenic |
| AGATCTTAAAGATATACCAA+AGG | 0.648218 | 5.3:+75623144 | MS.gene63806:CDS |
| ACATGATGACAAAATTCGAG+TGG | 0.655436 | 5.3:+75622622 | MS.gene63806:CDS |
| CATGATCTGCTGAATAGTGA+TGG | 0.656942 | 5.3:+75620460 | MS.gene63806:CDS |
| ATTGCAGATTCAAAGCGACA+AGG | 0.684261 | 5.3:+75620292 | MS.gene63806:CDS |
| TAACTTACTGACCAATAATG+GGG | 0.687423 | 5.3:-75621616 | None:intergenic |
| GGGAGACAAAGTCATTAAAG+CGG | 0.691811 | 5.3:-75621596 | None:intergenic |
| CGCGTGATATCATCCTTACG+GGG | 0.701287 | 5.3:+75622599 | MS.gene63806:CDS |
| CCTGTAAATGATGCTGTCAG+TGG | 0.715225 | 5.3:+75623073 | MS.gene63806:CDS |
| ATCAATTATTGATGTCACGG+AGG | 0.720432 | 5.3:-75621523 | None:intergenic |
| ACATTTGGAAAGTCACCAGG+AGG | 0.745590 | 5.3:-75623762 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCAAAAATAAAAAATAAAAT+TGG | - | chr5.3:75618598-75618617 | None:intergenic | 10.0% |
| !!! | AAATATTTTAGAGATATTTT+AGG | - | chr5.3:75619438-75619457 | None:intergenic | 10.0% |
| !!! | ATAAATTTTTGTAATTGTAT+TGG | + | chr5.3:75620526-75620545 | MS.gene63806:intron | 10.0% |
| !!! | CCAATTTTATTTTTTATTTT+TGG | + | chr5.3:75618595-75618614 | MS.gene63806:intron | 10.0% |
| !!! | TTTAGAAATAATTAATTTTG+TGG | + | chr5.3:75623350-75623369 | MS.gene63806:intron | 10.0% |
| !! | ATAAATCAAATCAAATCAAA+AGG | - | chr5.3:75623311-75623330 | None:intergenic | 15.0% |
| !! | ATTAAAGAGGAATTTAATAT+AGG | - | chr5.3:75619653-75619672 | None:intergenic | 15.0% |
| !! | ATTGATATGATTAAATTACT+AGG | + | chr5.3:75623278-75623297 | MS.gene63806:intron | 15.0% |
| !! | CAAACATTATCATAAAATAA+AGG | - | chr5.3:75620044-75620063 | None:intergenic | 15.0% |
| !! | CTATGATTTATATTTGTTTA+TGG | + | chr5.3:75620718-75620737 | MS.gene63806:intron | 15.0% |
| !! | TTTCAATTATTAAGAGTAAA+AGG | + | chr5.3:75621084-75621103 | MS.gene63806:intron | 15.0% |
| !!! | ACTACTAATTGTTTTTATAA+TGG | + | chr5.3:75622700-75622719 | MS.gene63806:intron | 15.0% |
| !!! | CTACTAATTGTTTTTATAAT+GGG | + | chr5.3:75622701-75622720 | MS.gene63806:intron | 15.0% |
| !!! | CTTTATTTTATGATAATGTT+TGG | + | chr5.3:75620042-75620061 | MS.gene63806:intron | 15.0% |
| !!! | TTGATTTGATTTATTCTTTT+GGG | + | chr5.3:75623317-75623336 | MS.gene63806:intron | 15.0% |
| !!! | TTTCATTTTTTTTTTTTCCA+TGG | + | chr5.3:75622090-75622109 | MS.gene63806:intron | 15.0% |
| !!! | TTTGATTTGATTTATTCTTT+TGG | + | chr5.3:75623316-75623335 | MS.gene63806:intron | 15.0% |
| !! | AAATATTAAAATGCACTTGT+AGG | + | chr5.3:75620551-75620570 | MS.gene63806:intron | 20.0% |
| !! | AATCAATACATTCACTAAAA+TGG | - | chr5.3:75620849-75620868 | None:intergenic | 20.0% |
| !! | ATCAAATATAGTTTCTGATA+GGG | + | chr5.3:75621385-75621404 | MS.gene63806:intron | 20.0% |
| !! | ATCAATACATTCACTAAAAT+GGG | - | chr5.3:75620848-75620867 | None:intergenic | 20.0% |
| !! | GATTCTTAAAATTCTTTAAG+AGG | - | chr5.3:75623896-75623915 | None:intergenic | 20.0% |
| !! | GGTATGAAGAAATAAATTAA+AGG | - | chr5.3:75620219-75620238 | None:intergenic | 20.0% |
| !! | TAAATCTAAAAGGCAAAAAA+AGG | - | chr5.3:75619964-75619983 | None:intergenic | 20.0% |
| !! | TATCAAATATAGTTTCTGAT+AGG | + | chr5.3:75621384-75621403 | MS.gene63806:intron | 20.0% |
| !! | TTGAAACTAACATTATTTGT+TGG | + | chr5.3:75621225-75621244 | MS.gene63806:intron | 20.0% |
| !! | TTTATTTGACATGATTTGAT+TGG | + | chr5.3:75619455-75619474 | MS.gene63806:intron | 20.0% |
| !!! | ATTTTAAATGAGTAAGATTC+TGG | - | chr5.3:75620400-75620419 | None:intergenic | 20.0% |
| !!! | CTTATTACATTAGTTTTAAC+TGG | + | chr5.3:75622172-75622191 | MS.gene63806:intron | 20.0% |
| !!! | GCAAAAACTAATTGATAATT+TGG | + | chr5.3:75623626-75623645 | MS.gene63806:CDS | 20.0% |
| !!! | TATTTTTGTTTATTGAAGAG+TGG | + | chr5.3:75623209-75623228 | MS.gene63806:intron | 20.0% |
| !!! | TGATTTGATTTATTCTTTTG+GGG | + | chr5.3:75623318-75623337 | MS.gene63806:intron | 20.0% |
| !!! | TTAAAATTCTTTAAGAGGTT+AGG | - | chr5.3:75623891-75623910 | None:intergenic | 20.0% |
| !!! | TTTGTTTATGCTTTTTTTTC+TGG | - | chr5.3:75620796-75620815 | None:intergenic | 20.0% |
| ! | AAAAACTAACCATAGAAAAG+TGG | - | chr5.3:75618986-75619005 | None:intergenic | 25.0% |
| ! | AAAACTAACCATAGAAAAGT+GGG | - | chr5.3:75618985-75619004 | None:intergenic | 25.0% |
| ! | AAAATTCAAAACAGGTACAA+AGG | + | chr5.3:75623727-75623746 | MS.gene63806:intron | 25.0% |
| ! | AAATCGATACACTTATTCAA+TGG | - | chr5.3:75622363-75622382 | None:intergenic | 25.0% |
| ! | AAATTCAAAACAGGTACAAA+GGG | + | chr5.3:75623728-75623747 | MS.gene63806:intron | 25.0% |
| ! | AAATTCACAATAAACATGTG+CGG | - | chr5.3:75620583-75620602 | None:intergenic | 25.0% |
| ! | AAGAGGAATTTAATATAGGA+AGG | - | chr5.3:75619649-75619668 | None:intergenic | 25.0% |
| ! | AATATCATGTAAGATGTTGT+TGG | - | chr5.3:75619216-75619235 | None:intergenic | 25.0% |
| ! | AATGATGTATATTGTCAACT+AGG | + | chr5.3:75619285-75619304 | MS.gene63806:intron | 25.0% |
| ! | ACATACAAACAGTATTTAAC+TGG | - | chr5.3:75623438-75623457 | None:intergenic | 25.0% |
| ! | AGAGGAATTTAATATAGGAA+GGG | - | chr5.3:75619648-75619667 | None:intergenic | 25.0% |
| ! | AGATCTTAAAGATATACCAA+AGG | + | chr5.3:75623144-75623163 | MS.gene63806:CDS | 25.0% |
| ! | ATATATTACCATTTACATCC+AGG | - | chr5.3:75620823-75620842 | None:intergenic | 25.0% |
| ! | ATGGTAAGTTATGTATGTTT+AGG | + | chr5.3:75620479-75620498 | MS.gene63806:intron | 25.0% |
| ! | ATGTAACAGAATCTAAAAAG+GGG | - | chr5.3:75618630-75618649 | None:intergenic | 25.0% |
| ! | ATTATTAAGAGTAAAAGGCT+TGG | + | chr5.3:75621089-75621108 | MS.gene63806:intron | 25.0% |
| ! | CAAAAAAAGGTCAAAACAAA+AGG | - | chr5.3:75619951-75619970 | None:intergenic | 25.0% |
| ! | CAAAGATAAAACATATGCAT+TGG | - | chr5.3:75619123-75619142 | None:intergenic | 25.0% |
| ! | CATGTAACAGAATCTAAAAA+GGG | - | chr5.3:75618631-75618650 | None:intergenic | 25.0% |
| ! | CATTATCAGTCATCTTAAAA+AGG | + | chr5.3:75623569-75623588 | MS.gene63806:CDS | 25.0% |
| ! | GATTAATATCTATGTACTGA+CGG | - | chr5.3:75619505-75619524 | None:intergenic | 25.0% |
| ! | GGAATTTCAAATAACAAAGA+AGG | - | chr5.3:75620879-75620898 | None:intergenic | 25.0% |
| ! | TAAAAATATGTTACGCTTTG+TGG | + | chr5.3:75620353-75620372 | MS.gene63806:intron | 25.0% |
| ! | TCATGTAACAGAATCTAAAA+AGG | - | chr5.3:75618632-75618651 | None:intergenic | 25.0% |
| ! | TGAAAACTAAGAAAATCTTC+AGG | - | chr5.3:75622075-75622094 | None:intergenic | 25.0% |
| ! | TGCGAATTAGTAGAAAAATA+TGG | + | chr5.3:75619245-75619264 | MS.gene63806:intron | 25.0% |
| ! | TTAAAATGTTCTCTTTGACA+TGG | + | chr5.3:75622892-75622911 | MS.gene63806:intron | 25.0% |
| ! | TTATACTAAATAGTGTATCG+CGG | - | chr5.3:75619817-75619836 | None:intergenic | 25.0% |
| ! | TTGATAGATACAAGACAAAA+TGG | - | chr5.3:75621370-75621389 | None:intergenic | 25.0% |
| !! | AAACTAATTGATAATTTGGC+AGG | + | chr5.3:75623630-75623649 | MS.gene63806:CDS | 25.0% |
| !! | AGGTGAAGTTTAAAACAATA+TGG | - | chr5.3:75620024-75620043 | None:intergenic | 25.0% |
| !! | ATTAATTTTGTGGATCTTCT+TGG | + | chr5.3:75623360-75623379 | MS.gene63806:intron | 25.0% |
| !! | GTTTTCAAATAACTGTCAAT+AGG | + | chr5.3:75621957-75621976 | MS.gene63806:intron | 25.0% |
| !! | TAAAATGTAGCTAGTTTCTT+TGG | + | chr5.3:75620414-75620433 | MS.gene63806:intron | 25.0% |
| !! | TCAACTACTTGTAACATTTT+CGG | - | chr5.3:75623846-75623865 | None:intergenic | 25.0% |
| !! | TTAATTTTGTGGATCTTCTT+GGG | + | chr5.3:75623361-75623380 | MS.gene63806:intron | 25.0% |
| !! | TTACTATCTTTAGAAATCAC+TGG | + | chr5.3:75621636-75621655 | MS.gene63806:intron | 25.0% |
| !!! | AGGGAGTACTATATATATAT+TGG | - | chr5.3:75619059-75619078 | None:intergenic | 25.0% |
| !!! | ATAAATGTTTTGGTGATCTT+TGG | - | chr5.3:75618536-75618555 | None:intergenic | 25.0% |
| !!! | TATCTTTAAGATCTGAAAGA+AGG | - | chr5.3:75623138-75623157 | None:intergenic | 25.0% |
| !!! | TTGCATCAATGTTATTTTTG+TGG | + | chr5.3:75622991-75623010 | MS.gene63806:intron | 25.0% |
| AAAAAGGTCAAAACAAAAGG+AGG | - | chr5.3:75619948-75619967 | None:intergenic | 30.0% | |
| AAACTAACCATAGAAAAGTG+GGG | - | chr5.3:75618984-75619003 | None:intergenic | 30.0% | |
| AAAGTTGTAAGTCCACTAAA+TGG | - | chr5.3:75622275-75622294 | None:intergenic | 30.0% | |
| AAAGTTTAAGTGTACACTGT+CGG | - | chr5.3:75619361-75619380 | None:intergenic | 30.0% | |
| ACATGGAAAAATGGATATCA+GGG | + | chr5.3:75619020-75619039 | MS.gene63806:intron | 30.0% | |
| ACCAAAACATTTATCAGCAA+TGG | + | chr5.3:75618542-75618561 | MS.gene63806:CDS | 30.0% | |
| AGATAGTAAAAACTCGAAAC+TGG | - | chr5.3:75621340-75621359 | None:intergenic | 30.0% | |
| AGCTTTCGACAATAAAAAAC+AGG | - | chr5.3:75622410-75622429 | None:intergenic | 30.0% | |
| AGTAACTTACTGACCAATAA+TGG | - | chr5.3:75621621-75621640 | None:intergenic | 30.0% | |
| ATTATCGCTAATTACTGAAC+TGG | - | chr5.3:75620900-75620919 | None:intergenic | 30.0% | |
| GATAATGTAAGCATGTATCT+TGG | - | chr5.3:75623556-75623575 | None:intergenic | 30.0% | |
| GATATGATTGATTGCTTCAT+TGG | + | chr5.3:75618788-75618807 | MS.gene63806:intron | 30.0% | |
| GCAAAGTAGTGAATTATCAT+TGG | - | chr5.3:75618954-75618973 | None:intergenic | 30.0% | |
| GTAACTTACTGACCAATAAT+GGG | - | chr5.3:75621620-75621639 | None:intergenic | 30.0% | |
| GTATGATGAATCGAATTCTA+TGG | + | chr5.3:75623666-75623685 | MS.gene63806:intron | 30.0% | |
| GTCTGAATAGGATGTTATTA+GGG | + | chr5.3:75621200-75621219 | MS.gene63806:intron | 30.0% | |
| GTTAGGAAAAAAGTTACTGT+TGG | + | chr5.3:75618814-75618833 | MS.gene63806:intron | 30.0% | |
| TAAAGAACAAATCTACAGGA+TGG | - | chr5.3:75621440-75621459 | None:intergenic | 30.0% | |
| TAACTTACTGACCAATAATG+GGG | - | chr5.3:75621619-75621638 | None:intergenic | 30.0% | |
| TCAACCAAGTCATATAGTAT+GGG | - | chr5.3:75619086-75619105 | None:intergenic | 30.0% | |
| TCTGAATAGGATGTTATTAG+GGG | + | chr5.3:75621201-75621220 | MS.gene63806:intron | 30.0% | |
| TCTTAAAGATATACCAAAGG+CGG | + | chr5.3:75623147-75623166 | MS.gene63806:CDS | 30.0% | |
| TGACCTGTAAAATTCAAAAC+AGG | + | chr5.3:75623719-75623738 | MS.gene63806:intron | 30.0% | |
| TGATAGGGCATAAATCAATT+TGG | + | chr5.3:75621400-75621419 | MS.gene63806:intron | 30.0% | |
| TGTCTGAATAGGATGTTATT+AGG | + | chr5.3:75621199-75621218 | MS.gene63806:intron | 30.0% | |
| TTGCCACAAATCAAATATAG+TGG | + | chr5.3:75619679-75619698 | MS.gene63806:intron | 30.0% | |
| TTTATCTCCAAATACTCACA+AGG | - | chr5.3:75622387-75622406 | None:intergenic | 30.0% | |
| ! | AAACCTATGGTTATGCTTTT+GGG | + | chr5.3:75621784-75621803 | MS.gene63806:CDS | 30.0% |
| ! | ACCATTGCTGATAAATGTTT+TGG | - | chr5.3:75618546-75618565 | None:intergenic | 30.0% |
| ! | AGTTACTGTTGGTCAATTTT+AGG | + | chr5.3:75618825-75618844 | MS.gene63806:intron | 30.0% |
| ! | ATGTTATTTACTGAAGTTGC+TGG | + | chr5.3:75623454-75623473 | MS.gene63806:intron | 30.0% |
| ! | TCAACGAGCATATGATTTTA+CGG | + | chr5.3:75622490-75622509 | MS.gene63806:CDS | 30.0% |
| ! | TTTTTATTGTCGAAAGCTAC+TGG | + | chr5.3:75622412-75622431 | MS.gene63806:intron | 30.0% |
| !! | CAACCACTATATTTGATTTG+TGG | - | chr5.3:75619685-75619704 | None:intergenic | 30.0% |
| !! | CCTTTTAGATTTAAAGCAGT+CGG | + | chr5.3:75619971-75619990 | MS.gene63806:intron | 30.0% |
| !! | CTTTGATTTTCAGATTGTGA+TGG | + | chr5.3:75618661-75618680 | MS.gene63806:intron | 30.0% |
| !! | GTACCTGTTTTGAATTTTAC+AGG | - | chr5.3:75623725-75623744 | None:intergenic | 30.0% |
| !! | GTTCTAAAGAACAAATCTAC+AGG | - | chr5.3:75621444-75621463 | None:intergenic | 30.0% |
| !! | TGGGTTTGAACTTTTATTTG+TGG | + | chr5.3:75619714-75619733 | MS.gene63806:intron | 30.0% |
| !! | TTTTAGGAACTAACCTAAAG+AGG | - | chr5.3:75619422-75619441 | None:intergenic | 30.0% |
| !!! | CATCAATGTTATTTTTGTGG+TGG | + | chr5.3:75622994-75623013 | MS.gene63806:intron | 30.0% |
| !!! | CATTAGTTTTAACTGGCAAA+TGG | + | chr5.3:75622179-75622198 | MS.gene63806:intron | 30.0% |
| !!! | GGTGTTTTAGTACATGATTA+GGG | + | chr5.3:75622722-75622741 | MS.gene63806:intron | 30.0% |
| !!! | GTTTCGAGTTTTTACTATCT+AGG | + | chr5.3:75621340-75621359 | MS.gene63806:intron | 30.0% |
| !!! | TAGTGTCACATTTTTTTCCT+TGG | + | chr5.3:75621671-75621690 | MS.gene63806:intron | 30.0% |
| !!! | TTTAGTGGACTTACAACTTT+TGG | + | chr5.3:75622275-75622294 | MS.gene63806:CDS | 30.0% |
| AAATCTACAGGATGGTCTTT+AGG | - | chr5.3:75621432-75621451 | None:intergenic | 35.0% | |
| AAGCGGTAAGTAACTTCTAA+AGG | - | chr5.3:75621582-75621601 | None:intergenic | 35.0% | |
| AAGTCACTCGTGTGTATATT+GGG | + | chr5.3:75622835-75622854 | MS.gene63806:CDS | 35.0% | |
| AATATACACACGAGTGACTT+CGG | - | chr5.3:75622835-75622854 | None:intergenic | 35.0% | |
| ACAACAAACCTATCAGTTGT+AGG | - | chr5.3:75622002-75622021 | None:intergenic | 35.0% | |
| ACACTTATTCAATGGAGCTA+GGG | - | chr5.3:75622355-75622374 | None:intergenic | 35.0% | |
| ACATATCAACGATGTATCCA+AGG | - | chr5.3:75621691-75621710 | None:intergenic | 35.0% | |
| ACATGATGACAAAATTCGAG+TGG | + | chr5.3:75622622-75622641 | MS.gene63806:CDS | 35.0% | |
| AGACATAGCGAAAAACTTAG+TGG | - | chr5.3:75618707-75618726 | None:intergenic | 35.0% | |
| AGAGTTTATCATTGCTATGC+AGG | + | chr5.3:75620330-75620349 | MS.gene63806:CDS | 35.0% | |
| ATAGTGGTTGCTCTTGAATT+GGG | + | chr5.3:75619695-75619714 | MS.gene63806:intron | 35.0% | |
| ATCAATTATTGATGTCACGG+AGG | - | chr5.3:75621526-75621545 | None:intergenic | 35.0% | |
| ATTCAGTATGTTCTCTCTAG+CGG | - | chr5.3:75621051-75621070 | None:intergenic | 35.0% | |
| ATTGTCAAAACTAAGCACCA+TGG | - | chr5.3:75622110-75622129 | None:intergenic | 35.0% | |
| ATTTAATATAGGAAGGGCAG+TGG | - | chr5.3:75619642-75619661 | None:intergenic | 35.0% | |
| CATTGGATGCAAGTGTAAAA+TGG | - | chr5.3:75618937-75618956 | None:intergenic | 35.0% | |
| CTGAATAGGATGTTATTAGG+GGG | + | chr5.3:75621202-75621221 | MS.gene63806:intron | 35.0% | |
| CTTTGCTCCTTACCAAATTA+AGG | + | chr5.3:75620261-75620280 | MS.gene63806:intron | 35.0% | |
| GACATGGAAAAATGGATATC+AGG | + | chr5.3:75619019-75619038 | MS.gene63806:intron | 35.0% | |
| GATAATTTGGCAGGTGAATT+TGG | + | chr5.3:75623639-75623658 | MS.gene63806:CDS | 35.0% | |
| GATTGCTTCATTGGAAAGTT+AGG | + | chr5.3:75618797-75618816 | MS.gene63806:intron | 35.0% | |
| GCATAGCAATGATAAACTCT+TGG | - | chr5.3:75620330-75620349 | None:intergenic | 35.0% | |
| GCCATCAATTATTGATGTCA+CGG | - | chr5.3:75621529-75621548 | None:intergenic | 35.0% | |
| GGAACTGTTTGAAAAAGAAC+AGG | + | chr5.3:75623108-75623127 | MS.gene63806:CDS | 35.0% | |
| GTCAACCAAGTCATATAGTA+TGG | - | chr5.3:75619087-75619106 | None:intergenic | 35.0% | |
| GTCAATACCATTCCAATTGA+TGG | - | chr5.3:75620147-75620166 | None:intergenic | 35.0% | |
| GTGGCAAAGTGAAATTAAAG+AGG | - | chr5.3:75619666-75619685 | None:intergenic | 35.0% | |
| TAAGAGGTTAGGAATGTCAT+AGG | - | chr5.3:75623880-75623899 | None:intergenic | 35.0% | |
| TACACTTATTCAATGGAGCT+AGG | - | chr5.3:75622356-75622375 | None:intergenic | 35.0% | |
| TAGTTTCTTTGGCACAATCT+GGG | + | chr5.3:75620425-75620444 | MS.gene63806:CDS | 35.0% | |
| TATAGTGGTTGCTCTTGAAT+TGG | + | chr5.3:75619694-75619713 | MS.gene63806:intron | 35.0% | |
| TCAAACAGTTCCTTTCCAAT+TGG | - | chr5.3:75623100-75623119 | None:intergenic | 35.0% | |
| TCAACTAGGTCATCTATTGA+GGG | + | chr5.3:75619299-75619318 | MS.gene63806:intron | 35.0% | |
| TCACTAATATCAAGCTTGTG+AGG | - | chr5.3:75622569-75622588 | None:intergenic | 35.0% | |
| TCAGTAATTAGCGATAATGC+AGG | + | chr5.3:75620902-75620921 | MS.gene63806:intron | 35.0% | |
| TCCGTGACATCAATAATTGA+TGG | + | chr5.3:75621525-75621544 | MS.gene63806:CDS | 35.0% | |
| TCCTTACCAAATTAAGGTGT+GGG | + | chr5.3:75620267-75620286 | MS.gene63806:intron | 35.0% | |
| TCTTTCTCCATCAATTGGAA+TGG | + | chr5.3:75620137-75620156 | MS.gene63806:intron | 35.0% | |
| TGTCTACAAAACAGATAGAG+AGG | - | chr5.3:75621916-75621935 | None:intergenic | 35.0% | |
| TTCAGCAGATCATGTGTTAT+TGG | - | chr5.3:75620454-75620473 | None:intergenic | 35.0% | |
| TTCTTCGAAGTCCTCAAAAA+AGG | + | chr5.3:75620964-75620983 | MS.gene63806:CDS | 35.0% | |
| TTGTGGAAGTTTAATGCTGA+TGG | + | chr5.3:75620370-75620389 | MS.gene63806:intron | 35.0% | |
| TTTAATCTGACGATGTGACA+TGG | + | chr5.3:75619003-75619022 | MS.gene63806:intron | 35.0% | |
| TTTGCATTCTTTACCAGCTT+CGG | + | chr5.3:75621112-75621131 | MS.gene63806:intron | 35.0% | |
| ! | AAGAAACACTTTAGTTCACG+AGG | - | chr5.3:75620240-75620259 | None:intergenic | 35.0% |
| ! | ATTTTACGGGTGTAACATCA+TGG | + | chr5.3:75622504-75622523 | MS.gene63806:CDS | 35.0% |
| ! | CAAAAGCATAACCATAGGTT+TGG | - | chr5.3:75621785-75621804 | None:intergenic | 35.0% |
| ! | CAAACCTATGGTTATGCTTT+TGG | + | chr5.3:75621783-75621802 | MS.gene63806:CDS | 35.0% |
| ! | CAACGAGCATATGATTTTAC+GGG | + | chr5.3:75622491-75622510 | MS.gene63806:CDS | 35.0% |
| ! | CCGACTGCTTTAAATCTAAA+AGG | - | chr5.3:75619974-75619993 | None:intergenic | 35.0% |
| ! | CGATTTTCCTTGTGAGTATT+TGG | + | chr5.3:75622377-75622396 | MS.gene63806:intron | 35.0% |
| ! | TCAGCAGATCATGTGTTATT+GGG | - | chr5.3:75620453-75620472 | None:intergenic | 35.0% |
| ! | TCCGCATTGTTGTTATATAG+CGG | + | chr5.3:75619755-75619774 | MS.gene63806:intron | 35.0% |
| ! | TTTTCACCAGATAAAACTCC+AGG | - | chr5.3:75622461-75622480 | None:intergenic | 35.0% |
| !! | AACCAACTACTTGATAGTGA+TGG | - | chr5.3:75620944-75620963 | None:intergenic | 35.0% |
| !! | ATTGGAATGGTATTGACATG+TGG | + | chr5.3:75620150-75620169 | MS.gene63806:intron | 35.0% |
| !! | ATTTTGGTGCATATTTCCTC+AGG | + | chr5.3:75621491-75621510 | MS.gene63806:intron | 35.0% |
| !! | TCTCTGAAATGCTCAACATT+TGG | - | chr5.3:75623780-75623799 | None:intergenic | 35.0% |
| !! | TGATAGGTTTGTTGTTGTCA+TGG | + | chr5.3:75622007-75622026 | MS.gene63806:CDS | 35.0% |
| !! | TGATTTTGATGCCAAACCTA+TGG | + | chr5.3:75621771-75621790 | MS.gene63806:CDS | 35.0% |
| !! | TTCAGGTATAAGAGTGCTTT+GGG | - | chr5.3:75622058-75622077 | None:intergenic | 35.0% |
| !! | TTTTAACTGGCAAATGGTGT+TGG | + | chr5.3:75622185-75622204 | MS.gene63806:intron | 35.0% |
| !!! | AATTCGAGTGGTTTTGAACA+AGG | + | chr5.3:75622634-75622653 | MS.gene63806:CDS | 35.0% |
| !!! | CAGAATGCTTACCTTTTTTG+AGG | - | chr5.3:75620978-75620997 | None:intergenic | 35.0% |
| !!! | GGGTGTTTTAGTACATGATT+AGG | + | chr5.3:75622721-75622740 | MS.gene63806:intron | 35.0% |
| !!! | TTATTTTTGTGGTGGAATCG+TGG | + | chr5.3:75623002-75623021 | MS.gene63806:intron | 35.0% |
| AAAGCATAAACAAAGCGACC+TGG | + | chr5.3:75620802-75620821 | MS.gene63806:CDS | 40.0% | |
| ACTGGAGCACATTACATTTG+TGG | + | chr5.3:75622430-75622449 | MS.gene63806:CDS | 40.0% | |
| AGATCGTGGAAAACAACAGT+TGG | - | chr5.3:75619897-75619916 | None:intergenic | 40.0% | |
| AGCCATCACTATCAAGTAGT+TGG | + | chr5.3:75620939-75620958 | MS.gene63806:CDS | 40.0% | |
| ATATACACACGAGTGACTTC+GGG | - | chr5.3:75622834-75622853 | None:intergenic | 40.0% | |
| ATCGCGTGATATCATCCTTA+CGG | + | chr5.3:75622597-75622616 | MS.gene63806:CDS | 40.0% | |
| ATTAACCGACCAAACATTCC+TGG | - | chr5.3:75621180-75621199 | None:intergenic | 40.0% | |
| ATTACATTTGTGGACAGTCC+TGG | + | chr5.3:75622440-75622459 | MS.gene63806:CDS | 40.0% | |
| ATTGCAGATTCAAAGCGACA+AGG | + | chr5.3:75620292-75620311 | MS.gene63806:CDS | 40.0% | |
| CAATAGCCCACACCTTAATT+TGG | - | chr5.3:75620276-75620295 | None:intergenic | 40.0% | |
| CATGATCTGCTGAATAGTGA+TGG | + | chr5.3:75620460-75620479 | MS.gene63806:CDS | 40.0% | |
| CCAAGTCATATAGTATGGGA+CGG | - | chr5.3:75619082-75619101 | None:intergenic | 40.0% | |
| CTAGTTTCTTTGGCACAATC+TGG | + | chr5.3:75620424-75620443 | MS.gene63806:CDS | 40.0% | |
| CTCCTTACCAAATTAAGGTG+TGG | + | chr5.3:75620266-75620285 | MS.gene63806:intron | 40.0% | |
| CTGCTTAAATGTAGCTATCC+AGG | + | chr5.3:75621844-75621863 | MS.gene63806:CDS | 40.0% | |
| CTGTCAATAGGTGCACATAT+TGG | + | chr5.3:75621969-75621988 | MS.gene63806:intron | 40.0% | |
| GAAAGAGACCAATGTGTTTC+TGG | + | chr5.3:75622922-75622941 | MS.gene63806:intron | 40.0% | |
| GAAGTCACTCGTGTGTATAT+TGG | + | chr5.3:75622834-75622853 | MS.gene63806:CDS | 40.0% | |
| GACGATGTGACATGGAAAAA+TGG | + | chr5.3:75619011-75619030 | MS.gene63806:intron | 40.0% | |
| GCCGCTATATAACAACAATG+CGG | - | chr5.3:75619759-75619778 | None:intergenic | 40.0% | |
| GCTTGTGAGGATCAAACAAT+AGG | - | chr5.3:75622556-75622575 | None:intergenic | 40.0% | |
| GGGAGACAAAGTCATTAAAG+CGG | - | chr5.3:75621599-75621618 | None:intergenic | 40.0% | |
| GTCAACTAGGTCATCTATTG+AGG | + | chr5.3:75619298-75619317 | MS.gene63806:intron | 40.0% | |
| GTCTCGTCAACATCTTAAAC+AGG | + | chr5.3:75618732-75618751 | MS.gene63806:CDS | 40.0% | |
| GTGTTTGTAATTGCAGATCG+TGG | - | chr5.3:75619911-75619930 | None:intergenic | 40.0% | |
| TAGAGCTTCCAGAAACACAT+TGG | - | chr5.3:75622933-75622952 | None:intergenic | 40.0% | |
| TAGGAACTAACCTAAAGAGG+TGG | - | chr5.3:75619419-75619438 | None:intergenic | 40.0% | |
| TCAAAGCGACAAGGTTATCT+AGG | + | chr5.3:75620301-75620320 | MS.gene63806:CDS | 40.0% | |
| TCAACATTTGGAAAGTCACC+AGG | - | chr5.3:75623768-75623787 | None:intergenic | 40.0% | |
| TGAAGCAGCACACAGATTAA+AGG | - | chr5.3:75621466-75621485 | None:intergenic | 40.0% | |
| TGACGTCTTTCTCCATCAAT+TGG | + | chr5.3:75620132-75620151 | MS.gene63806:intron | 40.0% | |
| TGACTTTGTCTCCCCATTAT+TGG | + | chr5.3:75621605-75621624 | MS.gene63806:CDS | 40.0% | |
| TGGTCGGTTAATGTCTGAAT+AGG | + | chr5.3:75621188-75621207 | MS.gene63806:intron | 40.0% | |
| TGTTCAAAGCAATAGCGCTA+TGG | - | chr5.3:75619781-75619800 | None:intergenic | 40.0% | |
| TTAACCGACCAAACATTCCT+GGG | - | chr5.3:75621179-75621198 | None:intergenic | 40.0% | |
| TTCTCTTTGACATGGAGTGT+TGG | + | chr5.3:75622900-75622919 | MS.gene63806:intron | 40.0% | |
| TTTGGCAGGTGAATTTGGAA+AGG | + | chr5.3:75623644-75623663 | MS.gene63806:CDS | 40.0% | |
| ! | AAAGTATCCCCAGGAATGTT+TGG | + | chr5.3:75621168-75621187 | MS.gene63806:intron | 40.0% |
| ! | AAATCTGAAACCTCCCATGT+TGG | + | chr5.3:75620658-75620677 | MS.gene63806:CDS | 40.0% |
| ! | ATATGCATTGGTACGTGTGT+CGG | - | chr5.3:75619111-75619130 | None:intergenic | 40.0% |
| ! | CTTCTAAAGGCTTCAACTTC+TGG | - | chr5.3:75621569-75621588 | None:intergenic | 40.0% |
| ! | TGACCCAAAAGCATAACCAT+AGG | - | chr5.3:75621790-75621809 | None:intergenic | 40.0% |
| !! | CTTCAGGTATAAGAGTGCTT+TGG | - | chr5.3:75622059-75622078 | None:intergenic | 40.0% |
| !! | CTTTTGGGTCAATACTCAAC+TGG | + | chr5.3:75621799-75621818 | MS.gene63806:CDS | 40.0% |
| !! | GTAGAATGAAAAGTATCCCC+AGG | + | chr5.3:75621159-75621178 | MS.gene63806:intron | 40.0% |
| !! | TCTTCTTGGGTCATTTTCTC+TGG | + | chr5.3:75623374-75623393 | MS.gene63806:intron | 40.0% |
| !! | TGGTTCAATTACGCTGATTC+AGG | + | chr5.3:75618562-75618581 | MS.gene63806:CDS | 40.0% |
| !! | TTAGCTTTTCCCATCATTGC+AGG | - | chr5.3:75623600-75623619 | None:intergenic | 40.0% |
| !!! | GTGCTGCTTCACTTGTATTT+TGG | + | chr5.3:75621475-75621494 | MS.gene63806:intron | 40.0% |
| AAAGGAGATGCCTGCAATGA+TGG | + | chr5.3:75623587-75623606 | MS.gene63806:CDS | 45.0% | |
| AACCTATCAGTTGTAGGCTC+TGG | - | chr5.3:75621996-75622015 | None:intergenic | 45.0% | |
| AAGCATGTATCTTGGCTGCT+CGG | - | chr5.3:75623548-75623567 | None:intergenic | 45.0% | |
| AAGGAGATGCCTGCAATGAT+GGG | + | chr5.3:75623588-75623607 | MS.gene63806:CDS | 45.0% | |
| ACATTTGGAAAGTCACCAGG+AGG | - | chr5.3:75623765-75623784 | None:intergenic | 45.0% | |
| ACCTGTTGAGTATCACTGTC+GGG | - | chr5.3:75621304-75621323 | None:intergenic | 45.0% | |
| ACGTCCAAACCTTCCAACAT+GGG | - | chr5.3:75620674-75620693 | None:intergenic | 45.0% | |
| AGAAAGCAGAATCACTTGCC+TGG | - | chr5.3:75621865-75621884 | None:intergenic | 45.0% | |
| AGGGAATGCTGACCTCTATT+TGG | + | chr5.3:75622741-75622760 | MS.gene63806:intron | 45.0% | |
| AGTCATATAGTATGGGACGG+AGG | - | chr5.3:75619079-75619098 | None:intergenic | 45.0% | |
| ATTGATGTCACGGAGGAAAG+TGG | - | chr5.3:75621519-75621538 | None:intergenic | 45.0% | |
| CAAAGCGACCTGGATGTAAA+TGG | + | chr5.3:75620812-75620831 | MS.gene63806:CDS | 45.0% | |
| CAATGCATACTCGACGACAT+AGG | - | chr5.3:75619598-75619617 | None:intergenic | 45.0% | |
| CACCTGTTGAGTATCACTGT+CGG | - | chr5.3:75621305-75621324 | None:intergenic | 45.0% | |
| CACTAAATGGCATGTCTGCT+TGG | - | chr5.3:75622262-75622281 | None:intergenic | 45.0% | |
| CATTTCAGAGAGAGCTTGAG+TGG | + | chr5.3:75623789-75623808 | MS.gene63806:CDS | 45.0% | |
| CCACTGACAGCATCATTTAC+AGG | - | chr5.3:75623076-75623095 | None:intergenic | 45.0% | |
| CCGTCCCATACTATATGACT+TGG | + | chr5.3:75619079-75619098 | MS.gene63806:intron | 45.0% | |
| CCTGTAAATGATGCTGTCAG+TGG | + | chr5.3:75623073-75623092 | MS.gene63806:CDS | 45.0% | |
| CTATGTCGTCGAGTATGCAT+TGG | + | chr5.3:75619596-75619615 | MS.gene63806:intron | 45.0% | |
| GAAAGTCACCAGGAGGTAAA+TGG | - | chr5.3:75623758-75623777 | None:intergenic | 45.0% | |
| GACACAAAATGAACCGAAGC+TGG | - | chr5.3:75621128-75621147 | None:intergenic | 45.0% | |
| GATTGTGATGGTCGCATAAC+TGG | + | chr5.3:75618673-75618692 | MS.gene63806:intron | 45.0% | |
| GTCATATAGTATGGGACGGA+GGG | - | chr5.3:75619078-75619097 | None:intergenic | 45.0% | |
| GTGTCGCACTTAGACATTGA+TGG | - | chr5.3:75621894-75621913 | None:intergenic | 45.0% | |
| TAACCGACCAAACATTCCTG+GGG | - | chr5.3:75621178-75621197 | None:intergenic | 45.0% | |
| TACGTCCAAACCTTCCAACA+TGG | - | chr5.3:75620675-75620694 | None:intergenic | 45.0% | |
| TATCCCCAGGAATGTTTGGT+CGG | + | chr5.3:75621172-75621191 | MS.gene63806:intron | 45.0% | |
| TCGCGTGATATCATCCTTAC+GGG | + | chr5.3:75622598-75622617 | MS.gene63806:CDS | 45.0% | |
| TGGACAGCAACAGTATTTCC+AGG | - | chr5.3:75622242-75622261 | None:intergenic | 45.0% | |
| TGTCAGTGGTCCAATTGGAA+AGG | + | chr5.3:75623087-75623106 | MS.gene63806:CDS | 45.0% | |
| TTGCAGCTGATGAGGGTTTA+TGG | + | chr5.3:75622771-75622790 | MS.gene63806:intron | 45.0% | |
| TTTGTCATCATGTCCCCGTA+AGG | - | chr5.3:75622615-75622634 | None:intergenic | 45.0% | |
| ! | CAAGCAGACATGCCATTTAG+TGG | + | chr5.3:75622260-75622279 | MS.gene63806:CDS | 45.0% |
| ! | GCCCACACCTTAATTTGGTA+AGG | - | chr5.3:75620271-75620290 | None:intergenic | 45.0% |
| !! | AATGGTGTTGGTGTACAGTC+TGG | + | chr5.3:75622197-75622216 | MS.gene63806:intron | 45.0% |
| !! | GACAGTCCTGGAGTTTTATC+TGG | + | chr5.3:75622452-75622471 | MS.gene63806:CDS | 45.0% |
| !! | GCATCATGACGTGATTTGGT+AGG | - | chr5.3:75619397-75619416 | None:intergenic | 45.0% |
| !!! | TGGGAGAGAGTCTAGTTTTC+TGG | - | chr5.3:75622039-75622058 | None:intergenic | 45.0% |
| ACCCTCATCAGCTGCAACAT+CGG | - | chr5.3:75622768-75622787 | None:intergenic | 50.0% | |
| ACCTCCCATGTTGGAAGGTT+TGG | + | chr5.3:75620667-75620686 | MS.gene63806:CDS | 50.0% | |
| AGCATGTATCTTGGCTGCTC+GGG | - | chr5.3:75623547-75623566 | None:intergenic | 50.0% | |
| AGGGAGTTCCATTTACCTCC+TGG | + | chr5.3:75623747-75623766 | MS.gene63806:CDS | 50.0% | |
| AGGTCATCTATTGAGGGACG+AGG | + | chr5.3:75619305-75619324 | MS.gene63806:intron | 50.0% | |
| ATGGAGCTAGGGCAACTTAC+AGG | - | chr5.3:75622344-75622363 | None:intergenic | 50.0% | |
| CATAGAAAAGTGGGGTGACG+TGG | - | chr5.3:75618976-75618995 | None:intergenic | 50.0% | |
| CGCGTGATATCATCCTTACG+GGG | + | chr5.3:75622599-75622618 | MS.gene63806:CDS | 50.0% | |
| CGTCATGATGCCACCTCTTT+AGG | + | chr5.3:75619406-75619425 | MS.gene63806:intron | 50.0% | |
| CTAGGGCAACTTACAGGATG+AGG | - | chr5.3:75622338-75622357 | None:intergenic | 50.0% | |
| CTGAAACCTCCCATGTTGGA+AGG | + | chr5.3:75620662-75620681 | MS.gene63806:CDS | 50.0% | |
| GACCAGAGCCTACAACTGAT+AGG | + | chr5.3:75621991-75622010 | MS.gene63806:CDS | 50.0% | |
| GAGTTCGATCCGATCCCAAT+CGG | + | chr5.3:75618502-75618521 | MS.gene63806:CDS | 50.0% | |
| GATGCTGTCAGTGGTCCAAT+TGG | + | chr5.3:75623082-75623101 | MS.gene63806:CDS | 50.0% | |
| GGTCATCTATTGAGGGACGA+GGG | + | chr5.3:75619306-75619325 | MS.gene63806:intron | 50.0% | |
| GGTGGCATCATGACGTGATT+TGG | - | chr5.3:75619401-75619420 | None:intergenic | 50.0% | |
| GTTCTCTCTAGCGGCAGATA+AGG | - | chr5.3:75621042-75621061 | None:intergenic | 50.0% | |
| TCCAAACCTTCCAACATGGG+AGG | - | chr5.3:75620671-75620690 | None:intergenic | 50.0% | |
| TGCAACATCGGGCCAAATAG+AGG | - | chr5.3:75622756-75622775 | None:intergenic | 50.0% | |
| !! | CACGTCACCCCACTTTTCTA+TGG | + | chr5.3:75618974-75618993 | MS.gene63806:intron | 50.0% |
| !! | CTTTGGAGCACGAACCGATT+GGG | - | chr5.3:75618519-75618538 | None:intergenic | 50.0% |
| !! | TCTTTGGAGCACGAACCGAT+TGG | - | chr5.3:75618520-75618539 | None:intergenic | 50.0% |
| CCAGGAATGCTTCTCTCGTC+AGG | - | chr5.3:75622224-75622243 | None:intergenic | 55.0% | |
| CCCGATGTTGCAGCTGATGA+GGG | + | chr5.3:75622764-75622783 | MS.gene63806:intron | 55.0% | |
| CCCTCATCAGCTGCAACATC+GGG | - | chr5.3:75622767-75622786 | None:intergenic | 55.0% | |
| CTTCGATCACAAGCCGCCTT+TGG | - | chr5.3:75623163-75623182 | None:intergenic | 55.0% | |
| GAGCACGAACCGATTGGGAT+CGG | - | chr5.3:75618514-75618533 | None:intergenic | 55.0% | |
| GCCCGACAGTGATACTCAAC+AGG | + | chr5.3:75621300-75621319 | MS.gene63806:intron | 55.0% | |
| !! | CCTGACGAGAGAAGCATTCC+TGG | + | chr5.3:75622221-75622240 | MS.gene63806:CDS | 55.0% |
| ACGGAGGAAAGTGGCACCTG+AGG | - | chr5.3:75621510-75621529 | None:intergenic | 60.0% | |
| GCCCGATGTTGCAGCTGATG+AGG | + | chr5.3:75622763-75622782 | MS.gene63806:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 75618499 | 75623926 | 75618499 | ID=MS.gene63806 |
| chr5.3 | mRNA | 75618499 | 75623926 | 75618499 | ID=MS.gene63806.t1;Parent=MS.gene63806 |
| chr5.3 | exon | 75618499 | 75618583 | 75618499 | ID=MS.gene63806.t1.exon1;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75618499 | 75618583 | 75618499 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75618674 | 75618753 | 75618674 | ID=MS.gene63806.t1.exon2;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75618674 | 75618753 | 75618674 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75620283 | 75620351 | 75620283 | ID=MS.gene63806.t1.exon3;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75620283 | 75620351 | 75620283 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75620424 | 75620481 | 75620424 | ID=MS.gene63806.t1.exon4;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75620424 | 75620481 | 75620424 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75620648 | 75620703 | 75620648 | ID=MS.gene63806.t1.exon5;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75620648 | 75620703 | 75620648 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75620797 | 75620833 | 75620797 | ID=MS.gene63806.t1.exon6;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75620797 | 75620833 | 75620797 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75620924 | 75620985 | 75620924 | ID=MS.gene63806.t1.exon7;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75620924 | 75620985 | 75620924 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75621513 | 75621626 | 75621513 | ID=MS.gene63806.t1.exon8;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75621513 | 75621626 | 75621513 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75621763 | 75621865 | 75621763 | ID=MS.gene63806.t1.exon9;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75621763 | 75621865 | 75621763 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75621979 | 75622028 | 75621979 | ID=MS.gene63806.t1.exon10;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75621979 | 75622028 | 75621979 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75622215 | 75622343 | 75622215 | ID=MS.gene63806.t1.exon11;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75622215 | 75622343 | 75622215 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75622428 | 75622679 | 75622428 | ID=MS.gene63806.t1.exon12;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75622428 | 75622679 | 75622428 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75622777 | 75622856 | 75622777 | ID=MS.gene63806.t1.exon13;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75622777 | 75622856 | 75622777 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75623057 | 75623183 | 75623057 | ID=MS.gene63806.t1.exon14;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75623057 | 75623183 | 75623057 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75623522 | 75623665 | 75623522 | ID=MS.gene63806.t1.exon15;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75623522 | 75623665 | 75623522 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| chr5.3 | exon | 75623741 | 75623926 | 75623741 | ID=MS.gene63806.t1.exon16;Parent=MS.gene63806.t1 |
| chr5.3 | CDS | 75623741 | 75623926 | 75623741 | ID=cds.MS.gene63806.t1;Parent=MS.gene63806.t1 |
| Gene Sequence |
| Protein sequence |
