AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013541

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013541.t1 MTR_3g092070 98.701 385 5 0 1 385 1 385 0.0 782
MS.gene013541.t1 MTR_3g092070 99.371 318 2 0 1 318 1 318 0.0 653
MS.gene013541.t1 MTR_3g092080 79.167 384 75 3 5 385 8 389 0.0 614
MS.gene013541.t1 MTR_3g092080 82.000 350 62 1 5 354 8 356 0.0 591
MS.gene013541.t1 MTR_1g088750 51.211 289 133 3 47 328 856 1143 3.27e-91 298
MS.gene013541.t1 MTR_1g088750 51.211 289 133 3 47 328 905 1192 4.46e-91 298
MS.gene013541.t1 MTR_1g088730 51.211 289 133 3 47 328 899 1186 1.22e-90 296
MS.gene013541.t1 MTR_8g099065 55.378 251 110 2 63 312 516 765 9.50e-90 288
MS.gene013541.t1 MTR_3g089100 52.290 262 124 1 43 303 859 1120 4.48e-87 286
MS.gene013541.t1 MTR_3g089100 52.290 262 124 1 43 303 893 1154 5.37e-87 286
MS.gene013541.t1 MTR_3g089100 52.290 262 124 1 43 303 864 1125 5.47e-87 286
MS.gene013541.t1 MTR_5g009840 53.600 250 114 2 63 311 498 746 3.07e-85 276
MS.gene013541.t1 MTR_6g033740 53.629 248 112 3 63 309 482 727 6.93e-82 266
MS.gene013541.t1 MTR_1g099470 43.505 331 155 4 63 364 416 743 3.96e-79 258
MS.gene013541.t1 MTR_1g099480 43.675 332 154 5 63 364 450 778 1.31e-77 254
MS.gene013541.t1 MTR_1g101870 51.613 248 118 2 63 309 487 733 7.97e-76 251
MS.gene013541.t1 MTR_1g101870 51.613 248 118 2 63 309 539 785 1.05e-75 251
MS.gene013541.t1 MTR_4g074920 41.049 324 159 5 41 359 638 934 9.87e-70 236
MS.gene013541.t1 MTR_8g099065 60.109 183 71 2 63 244 516 697 1.93e-67 226
MS.gene013541.t1 MTR_7g075520 41.100 309 165 7 40 336 162 465 3.47e-62 207
MS.gene013541.t1 MTR_1g099480 55.191 183 81 1 63 244 450 632 5.18e-59 202
MS.gene013541.t1 MTR_6g023875 41.852 270 148 6 80 344 381 646 1.42e-56 196
MS.gene013541.t1 MTR_6g023855 42.029 276 140 8 80 344 245 511 3.55e-56 192
MS.gene013541.t1 MTR_4g096870 39.350 277 152 7 80 345 118 389 2.88e-55 187
MS.gene013541.t1 MTR_4g011810 37.736 265 150 5 81 332 242 504 2.99e-50 177
MS.gene013541.t1 MTR_2g086160 40.435 230 130 5 80 306 131 356 5.13e-49 171
MS.gene013541.t1 MTR_2g086160 41.667 216 119 5 80 292 131 342 1.46e-48 168
MS.gene013541.t1 MTR_6g023865 36.934 287 152 7 80 344 157 436 4.92e-48 169
MS.gene013541.t1 MTR_4g053350 40.435 230 130 5 80 306 126 351 9.34e-48 168
MS.gene013541.t1 MTR_4g053350 40.435 230 130 5 80 306 126 351 9.65e-48 168
MS.gene013541.t1 MTR_3g117230 38.525 244 142 4 67 305 125 365 6.96e-46 162
MS.gene013541.t1 MTR_3g112260 38.115 244 143 4 67 305 122 362 1.76e-45 161
MS.gene013541.t1 MTR_1g063380 39.827 231 130 4 80 306 204 429 4.08e-45 166
MS.gene013541.t1 MTR_1g063380 35.547 256 149 6 80 325 477 726 2.66e-43 161
MS.gene013541.t1 MTR_7g101870 39.394 231 131 4 80 306 205 430 2.70e-44 164
MS.gene013541.t1 MTR_7g101870 35.606 264 153 7 80 333 478 734 9.79e-44 162
MS.gene013541.t1 MTR_2g095210 36.255 251 146 5 80 322 405 649 7.26e-44 162
MS.gene013541.t1 MTR_2g095210 45.238 84 45 1 80 163 206 288 7.44e-14 73.6
MS.gene013541.t1 MTR_4g094270 39.316 234 131 5 80 306 155 384 9.87e-43 154
MS.gene013541.t1 MTR_6g023845 34.926 272 137 7 80 344 115 353 4.33e-40 146
MS.gene013541.t1 MTR_2g095320 38.095 231 130 5 80 306 152 373 9.84e-40 150
MS.gene013541.t1 MTR_2g095320 34.137 249 141 6 80 322 420 651 6.05e-38 145
MS.gene013541.t1 MTR_3g062510 37.768 233 135 5 80 306 158 386 1.12e-39 146
MS.gene013541.t1 MTR_1g083330 37.500 232 131 7 82 305 168 393 2.27e-38 142
MS.gene013541.t1 MTR_4g033235 37.500 232 131 7 82 305 169 394 2.44e-38 142
MS.gene013541.t1 MTR_1g095660 37.657 239 131 7 80 305 117 350 1.22e-37 140
MS.gene013541.t1 MTR_7g099640 37.391 230 134 5 83 306 189 414 4.84e-37 139
MS.gene013541.t1 MTR_7g099640 37.391 230 134 5 83 306 189 414 6.59e-37 139
MS.gene013541.t1 MTR_1g069105 36.957 230 135 5 83 306 190 415 9.65e-37 139
MS.gene013541.t1 MTR_7g089290 33.803 284 159 10 36 311 611 873 1.10e-36 142
MS.gene013541.t1 MTR_7g089290 33.803 284 159 10 36 311 639 901 1.19e-36 142
MS.gene013541.t1 MTR_3g062510 44.324 185 93 5 80 258 158 338 3.02e-36 135
MS.gene013541.t1 MTR_7g089040 34.335 233 140 6 81 306 685 911 1.34e-35 139
MS.gene013541.t1 MTR_7g089040 32.889 225 123 7 120 326 422 636 9.70e-27 112
MS.gene013541.t1 MTR_7g088830 33.906 233 141 6 81 306 658 884 1.27e-34 136
MS.gene013541.t1 MTR_7g088830 30.800 250 158 8 86 331 401 639 1.70e-23 103
MS.gene013541.t1 MTR_2g007010 35.685 241 144 6 83 317 240 475 1.60e-34 135
MS.gene013541.t1 MTR_2g007010 30.043 233 156 4 80 308 527 756 3.04e-33 132
MS.gene013541.t1 MTR_7g096060 37.815 238 126 8 81 305 240 468 2.42e-34 134
MS.gene013541.t1 MTR_4g067100 37.295 244 138 8 74 306 371 610 2.55e-34 135
MS.gene013541.t1 MTR_4g067100 37.295 244 138 8 74 306 371 610 2.82e-34 135
MS.gene013541.t1 MTR_2g024440 31.615 291 177 8 80 357 213 494 5.70e-33 129
MS.gene013541.t1 MTR_7g010800 37.768 233 130 6 81 305 206 431 5.74e-33 130
MS.gene013541.t1 MTR_1g069105 42.021 188 99 5 83 264 190 373 6.09e-33 127
MS.gene013541.t1 MTR_6g016600 36.752 234 140 4 76 305 312 541 7.80e-33 130
MS.gene013541.t1 MTR_4g094662 36.017 236 136 6 78 305 226 454 8.06e-33 130
MS.gene013541.t1 MTR_7g088850 35.021 237 150 3 81 314 282 517 9.39e-33 129
MS.gene013541.t1 MTR_7g088850 33.790 219 131 7 94 305 30 241 7.92e-22 97.4
MS.gene013541.t1 MTR_7g078570 38.494 239 123 10 81 305 192 420 9.76e-33 130
MS.gene013541.t1 MTR_2g024440 31.615 291 177 8 80 357 296 577 1.43e-32 129
MS.gene013541.t1 MTR_2g024440 31.615 291 177 8 80 357 295 576 1.51e-32 129
MS.gene013541.t1 MTR_3g115110 33.119 311 174 13 81 379 249 537 5.99e-32 127
MS.gene013541.t1 MTR_5g075340 33.681 288 170 8 80 363 228 498 6.72e-32 128
MS.gene013541.t1 MTR_3g104480 32.827 329 178 10 44 363 197 491 8.40e-32 127
MS.gene013541.t1 MTR_4g064350 36.402 239 128 9 81 305 320 548 1.05e-31 127
MS.gene013541.t1 MTR_2g438140 35.622 233 135 6 81 305 226 451 1.49e-31 126
MS.gene013541.t1 MTR_6g059690 37.238 239 126 9 81 305 197 425 1.95e-31 126
MS.gene013541.t1 MTR_2g438140 35.622 233 135 6 81 305 286 511 3.77e-31 125
MS.gene013541.t1 MTR_2g078630 32.075 265 158 8 83 330 68 327 5.06e-31 125
MS.gene013541.t1 MTR_3g104470 33.449 287 170 8 81 363 224 493 5.33e-31 125
MS.gene013541.t1 MTR_2g078630 32.075 265 158 8 83 330 596 855 1.11e-30 124
MS.gene013541.t1 MTR_3g023900 29.719 249 152 5 80 308 530 775 6.69e-30 122
MS.gene013541.t1 MTR_3g023900 32.661 248 149 9 83 317 236 478 4.90e-26 110
MS.gene013541.t1 MTR_7g088980 34.127 252 151 5 81 320 136 384 9.56e-30 119
MS.gene013541.t1 MTR_7g088980 34.127 252 151 5 81 320 218 466 2.58e-29 119
MS.gene013541.t1 MTR_7g088980 36.800 125 74 4 178 299 49 171 3.89e-13 70.9
MS.gene013541.t1 MTR_7g088980 34.127 252 151 5 81 320 286 534 3.54e-29 119
MS.gene013541.t1 MTR_7g088980 36.726 226 127 8 84 299 20 239 1.44e-27 114
MS.gene013541.t1 MTR_0376s0020 34.894 235 136 8 81 305 1 228 3.85e-29 119
MS.gene013541.t1 MTR_1g028390 33.681 288 163 10 83 363 331 597 3.87e-29 119
MS.gene013541.t1 MTR_7g088980 34.127 252 151 5 81 320 312 560 6.83e-29 118
MS.gene013541.t1 MTR_7g088980 36.898 187 109 5 120 299 81 265 4.79e-25 107
MS.gene013541.t1 MTR_5g069780 36.402 239 130 8 81 306 313 542 1.24e-28 118
MS.gene013541.t1 MTR_3g462930 36.441 236 134 7 81 306 304 533 1.63e-28 117
MS.gene013541.t1 MTR_8g023550 33.906 233 127 7 80 305 164 376 3.13e-28 114
MS.gene013541.t1 MTR_8g099605 34.310 239 140 5 81 306 404 638 3.19e-28 117
MS.gene013541.t1 MTR_8g099605 34.310 239 140 5 81 306 163 397 5.11e-28 116
MS.gene013541.t1 MTR_2g101290 30.992 242 140 7 79 306 413 641 5.78e-28 116
MS.gene013541.t1 MTR_2g101290 30.992 242 140 7 79 306 413 641 6.03e-28 116
MS.gene013541.t1 MTR_7g088980 36.726 226 127 8 84 299 20 239 7.32e-28 115
MS.gene013541.t1 MTR_3g023890 32.922 243 136 7 80 299 384 622 7.36e-28 115
MS.gene013541.t1 MTR_3g023890 30.233 215 135 6 104 308 116 325 1.82e-20 93.6
MS.gene013541.t1 MTR_3g096000 35.246 244 133 9 81 308 296 530 5.41e-27 113
MS.gene013541.t1 MTR_5g075360 32.459 305 176 11 68 363 2 285 2.15e-26 110
MS.gene013541.t1 MTR_5g075360 32.459 305 176 11 68 363 178 461 4.52e-26 110
MS.gene013541.t1 MTR_5g075360 33.455 275 155 9 97 363 81 335 5.97e-26 109
MS.gene013541.t1 MTR_5g075360 33.455 275 155 9 97 363 257 511 1.01e-25 109
MS.gene013541.t1 MTR_7g088980 36.898 187 109 5 120 299 81 265 2.49e-25 107
MS.gene013541.t1 MTR_8g469460 30.070 286 153 9 80 363 206 446 1.34e-22 100
MS.gene013541.t1 MTR_8g056860 33.333 201 111 7 120 305 507 699 4.52e-22 99.0
MS.gene013541.t1 MTR_3g104490 29.720 286 162 9 80 363 206 454 6.60e-22 98.2
MS.gene013541.t1 MTR_5g074850 29.352 293 180 10 80 363 497 771 4.50e-20 92.8
MS.gene013541.t1 MTR_1g080430 27.178 287 152 12 13 262 594 860 1.81e-18 87.8
MS.gene013541.t1 MTR_1g080430 27.178 287 152 12 13 262 594 860 1.89e-18 87.8
MS.gene013541.t1 MTR_4g088885 31.308 214 118 8 120 311 261 467 2.20e-17 84.3
MS.gene013541.t1 MTR_4g083460 27.018 285 147 9 83 348 839 1081 2.89e-16 81.3
MS.gene013541.t1 MTR_5g020530 36.735 147 80 6 117 258 386 524 2.95e-15 77.8
MS.gene013541.t1 MTR_6g005760 32.911 158 87 4 117 266 233 379 7.12e-15 76.3
MS.gene013541.t1 MTR_6g005760 32.911 158 87 4 117 266 361 507 9.95e-15 76.3
MS.gene013541.t1 MTR_4g112600 47.561 82 37 3 84 162 3 81 2.40e-14 68.2
MS.gene013541.t1 MTR_4g077880 34.810 158 84 6 117 266 367 513 5.31e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013541.t1 AT4G27680 77.309 379 85 1 1 379 1 378 0.0 605
MS.gene013541.t1 AT5G53540 71.503 386 107 2 3 385 6 391 0.0 570
MS.gene013541.t1 AT4G02480 54.373 263 118 2 47 308 927 1188 3.25e-91 298
MS.gene013541.t1 AT1G02890 52.593 270 127 1 45 313 905 1174 3.40e-91 298
MS.gene013541.t1 AT4G24860 53.025 281 126 2 59 333 768 1048 5.65e-90 293
MS.gene013541.t1 AT1G64110 54.980 251 111 2 63 312 495 744 8.36e-90 288
MS.gene013541.t1 AT1G64110 54.980 251 111 2 63 312 500 749 8.52e-90 288
MS.gene013541.t1 AT1G64110 54.980 251 111 2 63 312 500 749 8.52e-90 288
MS.gene013541.t1 AT4G24860 53.025 281 126 2 59 333 793 1073 8.56e-90 293
MS.gene013541.t1 AT4G24860 53.025 281 126 2 59 333 795 1075 8.92e-90 293
MS.gene013541.t1 AT1G64110 54.980 251 111 2 63 312 498 747 9.81e-90 288
MS.gene013541.t1 AT1G64110 54.980 251 111 2 63 312 498 747 9.81e-90 288
MS.gene013541.t1 AT4G24860 53.025 281 126 2 59 333 791 1071 1.09e-89 293
MS.gene013541.t1 AT3G19740 45.427 328 172 4 39 359 657 984 1.04e-85 280
MS.gene013541.t1 AT1G50140 51.953 256 122 1 60 314 668 923 6.23e-85 278
MS.gene013541.t1 AT1G50140 51.953 256 122 1 60 314 668 923 6.23e-85 278
MS.gene013541.t1 AT1G50140 51.953 256 122 1 60 314 690 945 6.98e-85 278
MS.gene013541.t1 AT1G50140 51.953 256 122 1 60 314 690 945 6.98e-85 278
MS.gene013541.t1 AT1G50140 51.953 256 122 1 60 314 690 945 6.98e-85 278
MS.gene013541.t1 AT5G52882 51.894 264 124 3 59 321 492 753 4.29e-84 273
MS.gene013541.t1 AT4G28000 49.825 285 133 4 63 346 499 774 1.79e-83 271
MS.gene013541.t1 AT4G28000 49.825 285 133 4 63 346 499 774 2.98e-83 271
MS.gene013541.t1 AT4G28000 49.825 285 133 4 63 346 497 772 3.10e-83 271
MS.gene013541.t1 AT1G62130 47.445 274 130 3 39 312 704 963 1.76e-72 244
MS.gene013541.t1 AT1G62130 47.445 274 130 3 39 312 711 970 2.01e-72 244
MS.gene013541.t1 AT1G02890 45.926 270 117 2 45 313 905 1146 6.72e-71 241
MS.gene013541.t1 AT2G45500 44.488 254 131 5 63 310 59 308 1.30e-64 210
MS.gene013541.t1 AT2G45500 44.488 254 131 5 63 310 59 308 1.30e-64 210
MS.gene013541.t1 AT2G45500 44.488 254 131 5 63 310 192 441 2.46e-63 210
MS.gene013541.t1 AT2G45500 44.488 254 131 5 63 310 196 445 2.81e-63 210
MS.gene013541.t1 AT2G45500 44.488 254 131 5 63 310 202 451 5.88e-63 209
MS.gene013541.t1 AT2G34560 36.741 313 173 8 38 339 66 364 1.11e-55 187
MS.gene013541.t1 AT3G27120 44.828 232 122 4 80 308 399 627 1.44e-55 194
MS.gene013541.t1 AT2G34560 36.741 313 173 8 38 339 75 373 1.45e-55 187
MS.gene013541.t1 AT1G80350 37.358 265 151 5 81 332 236 498 6.88e-50 176
MS.gene013541.t1 AT5G43010 38.934 244 141 4 67 305 122 362 3.70e-47 166
MS.gene013541.t1 AT1G45000 38.934 244 141 4 67 305 122 362 3.78e-47 166
MS.gene013541.t1 AT2G27600 34.589 292 154 7 80 338 128 415 1.14e-46 165
MS.gene013541.t1 AT3G09840 39.827 231 130 4 80 306 203 428 4.78e-45 166
MS.gene013541.t1 AT3G09840 35.019 257 150 6 80 325 476 726 2.51e-42 158
MS.gene013541.t1 AT5G03340 39.394 231 131 4 80 306 203 428 1.47e-44 164
MS.gene013541.t1 AT5G03340 36.905 252 141 6 80 319 476 721 1.71e-44 164
MS.gene013541.t1 AT3G53230 38.961 231 132 4 80 306 204 429 7.33e-44 162
MS.gene013541.t1 AT3G53230 35.918 245 143 5 80 316 477 715 1.86e-42 158
MS.gene013541.t1 AT5G19990 39.316 234 131 5 80 306 157 386 1.27e-42 154
MS.gene013541.t1 AT5G19990 39.316 234 131 5 80 306 157 386 1.27e-42 154
MS.gene013541.t1 AT5G19990 39.316 234 131 5 80 306 99 328 1.66e-42 152
MS.gene013541.t1 AT5G20000 39.316 234 131 5 80 306 157 386 1.71e-42 154
MS.gene013541.t1 AT1G53750 39.056 233 130 6 80 305 164 391 9.79e-42 152
MS.gene013541.t1 AT5G58290 37.768 233 135 5 80 306 151 379 4.60e-40 147
MS.gene013541.t1 AT1G53780 38.197 233 130 6 80 304 335 561 1.31e-38 146
MS.gene013541.t1 AT1G53780 38.197 233 130 6 80 304 336 562 1.32e-38 146
MS.gene013541.t1 AT1G53780 38.197 233 130 6 80 304 336 562 1.32e-38 146
MS.gene013541.t1 AT3G05530 37.339 233 130 7 82 305 169 394 1.39e-38 143
MS.gene013541.t1 AT1G53780 38.197 233 130 6 80 304 357 583 1.46e-38 146
MS.gene013541.t1 AT3G56690 35.714 238 142 6 81 312 721 953 1.44e-37 144
MS.gene013541.t1 AT3G56690 29.582 311 203 6 2 308 310 608 5.12e-35 137
MS.gene013541.t1 AT1G09100 36.910 233 131 7 82 305 168 393 2.35e-37 140
MS.gene013541.t1 AT1G03000 34.000 250 156 7 76 319 650 896 2.12e-36 141
MS.gene013541.t1 AT4G29040 36.522 230 136 5 83 306 187 412 3.99e-36 137
MS.gene013541.t1 AT2G20140 36.522 230 136 5 83 306 187 412 9.73e-36 136
MS.gene013541.t1 AT1G05910 36.864 236 136 7 80 306 377 608 7.43e-35 137
MS.gene013541.t1 AT5G15250 37.712 236 126 8 81 305 221 446 5.85e-34 133
MS.gene013541.t1 AT3G01610 33.610 241 149 5 80 315 524 758 1.48e-33 132
MS.gene013541.t1 AT3G01610 35.223 247 144 6 83 317 232 474 7.13e-33 130
MS.gene013541.t1 AT1G06430 37.288 236 133 6 78 305 214 442 1.59e-33 132
MS.gene013541.t1 AT1G06430 37.288 236 133 6 78 305 214 442 1.59e-33 132
MS.gene013541.t1 AT1G06430 37.288 236 133 6 78 305 214 442 1.59e-33 132
MS.gene013541.t1 AT3G01610 33.610 241 149 5 80 315 524 758 1.66e-33 132
MS.gene013541.t1 AT3G01610 35.223 247 144 6 83 317 232 474 8.21e-33 130
MS.gene013541.t1 AT2G30950 37.339 233 131 6 81 305 228 453 1.67e-33 132
MS.gene013541.t1 AT2G30950 37.339 233 131 6 81 305 224 449 1.85e-33 132
MS.gene013541.t1 AT2G30950 37.339 233 131 6 81 305 224 449 1.85e-33 132
MS.gene013541.t1 AT2G30950 37.339 233 131 6 81 305 224 449 1.85e-33 132
MS.gene013541.t1 AT5G42270 33.548 310 174 12 81 379 247 535 5.56e-33 130
MS.gene013541.t1 AT5G08470 33.086 269 171 6 83 348 843 1105 7.82e-33 130
MS.gene013541.t1 AT5G08470 33.086 269 171 6 83 348 834 1096 8.72e-33 130
MS.gene013541.t1 AT1G50250 33.548 310 174 12 81 379 259 547 1.33e-32 129
MS.gene013541.t1 AT2G29080 37.553 237 127 8 81 305 319 546 5.53e-32 128
MS.gene013541.t1 AT1G07510 36.820 239 127 9 81 305 324 552 9.57e-32 127
MS.gene013541.t1 AT3G02450 36.364 231 135 6 81 305 331 555 1.21e-31 126
MS.gene013541.t1 AT2G26140 33.798 287 169 8 81 363 224 493 1.67e-31 126
MS.gene013541.t1 AT2G03670 35.426 223 131 7 86 299 24 242 9.22e-31 122
MS.gene013541.t1 AT2G03670 36.842 114 71 1 81 194 283 395 1.81e-12 68.9
MS.gene013541.t1 AT5G58870 36.626 243 132 8 77 306 322 555 1.29e-30 124
MS.gene013541.t1 AT5G15250 34.483 261 123 9 81 305 221 469 1.70e-30 122
MS.gene013541.t1 AT4G04180 31.174 247 149 6 80 314 310 547 3.16e-30 122
MS.gene013541.t1 AT4G04180 31.174 247 149 6 80 314 315 552 3.23e-30 122
MS.gene013541.t1 AT2G03670 35.426 223 131 7 86 299 24 242 4.16e-30 122
MS.gene013541.t1 AT2G03670 32.174 230 151 3 81 306 283 511 2.93e-26 110
MS.gene013541.t1 AT5G53170 32.653 294 176 9 74 363 352 627 1.53e-29 120
MS.gene013541.t1 AT3G47060 34.959 246 138 8 81 313 322 558 8.42e-29 119
MS.gene013541.t1 AT4G23940 34.959 246 136 7 81 310 427 664 1.81e-28 117
MS.gene013541.t1 AT3G15120 31.667 240 147 7 83 308 718 954 3.21e-28 117
MS.gene013541.t1 AT3G15120 31.667 240 147 7 83 308 728 964 3.46e-28 117
MS.gene013541.t1 AT3G16290 30.992 242 140 7 79 306 405 633 1.04e-26 112
MS.gene013541.t1 AT1G45000 38.562 153 90 2 67 216 122 273 3.22e-26 107
MS.gene013541.t1 AT1G79560 35.644 202 107 7 120 306 527 720 9.12e-26 110
MS.gene013541.t1 AT1G79560 35.644 202 107 7 120 306 527 720 9.65e-26 109
MS.gene013541.t1 AT1G79560 35.644 202 107 7 120 306 527 720 1.05e-25 109
MS.gene013541.t1 AT5G64580 34.568 243 136 9 81 308 313 547 1.42e-25 109
MS.gene013541.t1 AT3G04340 31.658 199 117 8 73 262 776 964 5.70e-17 83.6
MS.gene013541.t1 AT4G04910 30.806 211 117 8 120 308 251 454 1.27e-16 82.0
MS.gene013541.t1 AT5G08470 34.161 161 100 5 83 242 843 998 1.49e-16 82.0
MS.gene013541.t1 AT5G16930 34.969 163 77 7 118 267 397 543 1.83e-14 75.5
MS.gene013541.t1 AT2G18330 32.877 146 87 4 117 258 383 521 2.12e-14 75.1
MS.gene013541.t1 AT3G03060 32.075 159 89 4 117 267 384 531 2.66e-14 75.1
MS.gene013541.t1 AT4G36580 32.877 146 87 4 117 258 380 518 1.94e-13 72.4

Find 102 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCTCAAGCCTTTGAAAT+TGG 0.177781 3.4:-84260784 MS.gene013541:CDS
TTTAATCCTTAGCATCTAAT+TGG 0.210584 3.4:+84260059 None:intergenic
ATATATCAGCCCTCTCTTTC+CGG 0.226986 3.4:+84260752 None:intergenic
CAGGGAATTATCTAAGATTA+TGG 0.229656 3.4:-84260095 MS.gene013541:CDS
TATATTGAAGGTTATCTTAA+AGG 0.231299 3.4:-84260734 MS.gene013541:CDS
CTAGGGCGGCGCTAAGTTAC+TGG 0.265505 3.4:-84265059 MS.gene013541:CDS
ATGTAGAATTTGACTCTATT+GGG 0.269048 3.4:-84264387 MS.gene013541:CDS
CCCCAAACCATTTGCTCATC+AGG 0.271211 3.4:+84264164 None:intergenic
ACCTTTGTCGCAAGCAGATT+TGG 0.276391 3.4:-84260233 MS.gene013541:CDS
ACCTGATGAGCAAATGGTTT+GGG 0.311167 3.4:-84264165 MS.gene013541:CDS
TTATGCAGTATTTCTCTAAT+AGG 0.315812 3.4:+84260607 None:intergenic
GATGTAGAATTTGACTCTAT+TGG 0.317232 3.4:-84264388 MS.gene013541:CDS
AAACTGAGTTCATGGCTCTA+TGG 0.320401 3.4:-84261019 MS.gene013541:CDS
ACATCAAGAACGTCGTTTCA+TGG 0.355841 3.4:-84260151 MS.gene013541:CDS
AAACATGAAAACTGAGTTCA+TGG 0.362291 3.4:-84261027 MS.gene013541:CDS
TACTTCATCGATGAATATAA+TGG 0.362913 3.4:+84261097 None:intergenic
AATGGGTACCTCATAGGAAT+TGG 0.365618 3.4:+84264927 None:intergenic
TTCTTCGATGATTCACGGTT+CGG 0.366779 3.4:+84265006 None:intergenic
AAAACAAGTCTGGTCGTTGC+AGG 0.370845 3.4:+84264317 None:intergenic
TCTTCGATGATTCACGGTTC+GGG 0.377468 3.4:+84265007 None:intergenic
CTCAGGTTGAAGCTGCAATC+AGG 0.378795 3.4:-84260114 MS.gene013541:CDS
AAAGCTATTGCCAAGGAGTC+TGG 0.379922 3.4:-84264217 MS.gene013541:CDS
TTGTATGGACCTCCTGGCAC+TGG 0.386661 3.4:-84264256 MS.gene013541:CDS
ACGTCGTTTCATGGCGAGTC+AGG 0.388975 3.4:-84260142 MS.gene013541:CDS
TAGGAATTGGTTTGAATAAG+AGG 0.390998 3.4:+84264940 None:intergenic
CAAACTTCTTGGACCACAAA+AGG 0.392804 3.4:-84264287 MS.gene013541:CDS
TGTAGAGAGTGCTCGGGTTA+TGG 0.397237 3.4:-84260860 MS.gene013541:intron
ATATTGAAGGTTATCTTAAA+GGG 0.410430 3.4:-84260733 MS.gene013541:CDS
AACCTGATGAGCAAATGGTT+TGG 0.428222 3.4:-84264166 MS.gene013541:CDS
CACGGTTCGGGTCGAGATAA+CGG 0.430729 3.4:+84265019 None:intergenic
AGGGAATTATCTAAGATTAT+GGG 0.432152 3.4:-84260094 MS.gene013541:CDS
AAACTTCTTGGACCACAAAA+GGG 0.435723 3.4:-84264286 MS.gene013541:CDS
GAGCCTTCTTCGATGATTCA+CGG 0.446293 3.4:+84265001 None:intergenic
AGTGGCTGCCGTATTTAGCT+TGG 0.452004 3.4:-84261138 MS.gene013541:CDS
ATGTCTTCCGCGAAGTAGAA+AGG 0.461125 3.4:+84260203 None:intergenic
GTTCTGTTGTATGGACCTCC+TGG 0.464854 3.4:-84264262 MS.gene013541:CDS
ATAGATTTCAGTTATATAGC+TGG 0.470990 3.4:-84260691 MS.gene013541:CDS
TCAGCCCTCTCTTTCCGGTC+TGG 0.471982 3.4:+84260757 None:intergenic
TACTGCATAATGAGAAGAAA+GGG 0.472605 3.4:-84260594 MS.gene013541:CDS
TCACATCCAATTAGATGCTA+AGG 0.475447 3.4:-84260065 MS.gene013541:CDS
TCCAAATCTGCTTGCGACAA+AGG 0.478481 3.4:+84260232 None:intergenic
TGGCGAGTCAGGTGATTCTC+AGG 0.479528 3.4:-84260131 MS.gene013541:CDS
TCTATTTGATCTTTGCAAGA+AGG 0.483151 3.4:-84260641 MS.gene013541:CDS
TATCAAACCTGATGAGCAAA+TGG 0.483375 3.4:-84264171 MS.gene013541:CDS
GTTGTTGTGTAGAGAGTGCT+CGG 0.484415 3.4:-84260867 MS.gene013541:intron
CCCTAGCCGCGTATAACAAC+AGG 0.485855 3.4:+84265076 None:intergenic
GAAAACTGCTCCAGACTCCT+TGG 0.486780 3.4:+84264207 None:intergenic
AATTCTACATCGATGTGGTC+AGG 0.489405 3.4:+84264400 None:intergenic
TATTCAAACCAATTCCTATG+AGG 0.495023 3.4:-84264935 MS.gene013541:intron
TCTGCTTGCGACAAAGGTCT+AGG 0.503149 3.4:+84260238 None:intergenic
ATACTGCATAATGAGAAGAA+AGG 0.503244 3.4:-84260595 MS.gene013541:CDS
AAAGAGATTGCTAAACGTCT+TGG 0.508962 3.4:-84264967 MS.gene013541:CDS
TTGCCATGCGAAAACAAGTC+TGG 0.509217 3.4:+84264307 None:intergenic
GGCGCTAAGTTACTGGGTAT+TGG 0.511795 3.4:-84265052 MS.gene013541:CDS
AACTGAGTTCATGGCTCTAT+GGG 0.515199 3.4:-84261018 MS.gene013541:CDS
AAGTTACTGGGTATTGGTCA+CGG 0.526475 3.4:-84265046 MS.gene013541:CDS
GGGAATTATCTAAGATTATG+GGG 0.530906 3.4:-84260093 MS.gene013541:CDS
TATATAGCTGGTTTATGCAA+GGG 0.532236 3.4:-84260679 MS.gene013541:CDS
TTTATGAGCCAAGCTAAATA+CGG 0.532998 3.4:+84261130 None:intergenic
AGAGAGGGCTGATATATTGA+AGG 0.534415 3.4:-84260746 MS.gene013541:CDS
GAACCGTGAATCATCGAAGA+AGG 0.537058 3.4:-84265004 MS.gene013541:CDS
TTCTACTTCGCGGAAGACAT+CGG 0.539207 3.4:-84260200 MS.gene013541:CDS
GGTTTATGCAAGGGTTACAC+TGG 0.540877 3.4:-84260670 MS.gene013541:CDS
TGTCTTCCGCGAAGTAGAAA+GGG 0.540884 3.4:+84260204 None:intergenic
GTCAGGATTTATAACATCAC+AGG 0.543896 3.4:+84264417 None:intergenic
AGTTACTGGGTATTGGTCAC+GGG 0.546408 3.4:-84265045 MS.gene013541:CDS
TTGAAATTGGATATCCAGAC+CGG 0.547953 3.4:-84260771 MS.gene013541:CDS
TTATATAGCTGGTTTATGCA+AGG 0.548540 3.4:-84260680 MS.gene013541:CDS
GTCTGGATATCCAATTTCAA+AGG 0.556914 3.4:+84260774 None:intergenic
TCAGGTTGAAGCTGCAATCA+GGG 0.557401 3.4:-84260113 MS.gene013541:CDS
TGTAGAATTTGACTCTATTG+GGG 0.558850 3.4:-84264386 MS.gene013541:CDS
ATTGCTTCATCAAGTTCTGA+AGG 0.564553 3.4:+84260817 None:intergenic
CCTGTTGTTATACGCGGCTA+GGG 0.564962 3.4:-84265076 MS.gene013541:CDS
GGTTATCTTAAAGGGCGAGA+AGG 0.568954 3.4:-84260725 MS.gene013541:CDS
ACCTGTTGTTATACGCGGCT+AGG 0.569819 3.4:-84265077 MS.gene013541:CDS
AAACAAGTCTGGTCGTTGCA+GGG 0.572120 3.4:+84264318 None:intergenic
GAGTTCATGGCTCTATGGGA+TGG 0.573516 3.4:-84261014 MS.gene013541:CDS
TATCCAATTTCAAAGGCTTG+AGG 0.578118 3.4:+84260781 None:intergenic
GTCGCAAGCAGATTTGGAGA+AGG 0.578637 3.4:-84260227 MS.gene013541:CDS
AACTTCTTGGACCACAAAAG+GGG 0.581082 3.4:-84264285 MS.gene013541:CDS
TAGGGCGGCGCTAAGTTACT+GGG 0.582080 3.4:-84265058 MS.gene013541:CDS
TCATCGATGAATATAATGGA+TGG 0.591454 3.4:+84261101 None:intergenic
AACAAGTCTGGTCGTTGCAG+GGG 0.601495 3.4:+84264319 None:intergenic
TGTATGGACCTCCTGGCACT+GGG 0.603811 3.4:-84264255 MS.gene013541:CDS
AGAAGGCCCTTTCTACTTCG+CGG 0.604409 3.4:-84260210 MS.gene013541:CDS
GATATCCAGACCGGAAAGAG+AGG 0.613846 3.4:-84260762 MS.gene013541:CDS
AACTTGATGAAGCAATACTT+CGG 0.627940 3.4:-84260810 MS.gene013541:CDS
GTTGTTATACGCGGCTAGGG+CGG 0.629884 3.4:-84265073 MS.gene013541:CDS
TTGCTTCATCAAGTTCTGAA+GGG 0.630399 3.4:+84260818 None:intergenic
GGAATTATCTAAGATTATGG+GGG 0.631503 3.4:-84260092 MS.gene013541:CDS
TTCTCTAATAGGAAAATATG+CGG 0.632360 3.4:+84260618 None:intergenic
GCGTCGTTCATCAGATCATG+AGG 0.633325 3.4:-84261057 MS.gene013541:CDS
GTTCGTTCAAAGGACATGGG+AGG 0.635319 3.4:-84265126 None:intergenic
ACTTCTTGGACCACAAAAGG+GGG 0.638715 3.4:-84264284 MS.gene013541:CDS
GCTCGCAAAAGCTATTGCCA+AGG 0.654543 3.4:-84264224 MS.gene013541:CDS
ACAAGACCTGTTGTTATACG+CGG 0.658412 3.4:-84265082 MS.gene013541:CDS
ATATCCAGACCGGAAAGAGA+GGG 0.660218 3.4:-84260761 MS.gene013541:CDS
TTGTTGTGTAGAGAGTGCTC+GGG 0.671596 3.4:-84260866 MS.gene013541:intron
GTAGAATTTGACTCTATTGG+GGG 0.672250 3.4:-84264385 MS.gene013541:CDS
ACTGCATAATGAGAAGAAAG+GGG 0.674597 3.4:-84260593 MS.gene013541:CDS
CCTGATGAGCAAATGGTTTG+GGG 0.676141 3.4:-84264164 MS.gene013541:CDS
AGTCAAATTCTACATCGATG+TGG 0.703743 3.4:+84264395 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAAAAAAAAAAAA+AGG + chr3.4:84262216-84262235 None:intergenic 0.0%
!! AATTAAATCACTTAAATAAA+AGG + chr3.4:84260703-84260722 None:intergenic 10.0%
!!! ATGAAAAAAGTATTAAAAAA+TGG + chr3.4:84260265-84260284 None:intergenic 10.0%
!!! TGAAAAAAGTATTAAAAAAT+GGG + chr3.4:84260264-84260283 None:intergenic 10.0%
!! AATAAAAGGAAAAGTAATAT+TGG + chr3.4:84260689-84260708 None:intergenic 15.0%
!! ATAAATTACAACAAAACTAT+TGG + chr3.4:84263091-84263110 None:intergenic 15.0%
!! ATTTGAAAATTGAAATAGAA+GGG - chr3.4:84263480-84263499 MS.gene013541:intron 15.0%
!! TATTAAAGAAAAAGATCAAA+CGG + chr3.4:84262417-84262436 None:intergenic 15.0%
!! TTATATATGATAGAACATTA+TGG - chr3.4:84261895-84261914 MS.gene013541:intron 15.0%
!!! ACACTTATATTTTTCATAAA+AGG - chr3.4:84261240-84261259 MS.gene013541:intron 15.0%
!!! ATTTTTATTGGCTAATAAAA+TGG - chr3.4:84263181-84263200 MS.gene013541:intron 15.0%
!!! CATGATCAAAATATTTTTTT+TGG + chr3.4:84261163-84261182 None:intergenic 15.0%
!!! TAAATTTTTGCTAATACATA+TGG - chr3.4:84261186-84261205 MS.gene013541:intron 15.0%
!!! TTATTTATTTTTCACTTTTC+AGG - chr3.4:84264908-84264927 MS.gene013541:intron 15.0%
!!! TTTTATTAGCCAATAAAAAT+AGG + chr3.4:84263181-84263200 None:intergenic 15.0%
!! AAACTATTGGAAATACAATT+AGG + chr3.4:84263078-84263097 None:intergenic 20.0%
!! AAACTTATTAAGATTGATCT+AGG - chr3.4:84261849-84261868 MS.gene013541:intron 20.0%
!! AACTTATTAAGATTGATCTA+GGG - chr3.4:84261850-84261869 MS.gene013541:intron 20.0%
!! AAGACTAGCATAATTTATTA+GGG - chr3.4:84260340-84260359 MS.gene013541:intron 20.0%
!! AATCAGACAAATATAACTTT+GGG + chr3.4:84264770-84264789 None:intergenic 20.0%
!! AATGAAAAATATACTAACAC+AGG + chr3.4:84264610-84264629 None:intergenic 20.0%
!! ACTTATATTGTATAATCAGT+CGG + chr3.4:84263911-84263930 None:intergenic 20.0%
!! ATATTGAAGGTTATCTTAAA+GGG - chr3.4:84264438-84264457 MS.gene013541:intron 20.0%
!! CAGTTCAAAACTATATAAAA+TGG - chr3.4:84263257-84263276 MS.gene013541:intron 20.0%
!! CATTTGAAAATTGAAATAGA+AGG - chr3.4:84263479-84263498 MS.gene013541:intron 20.0%
!! CTTATTATAGCAGTTAATAA+GGG - chr3.4:84263847-84263866 MS.gene013541:intron 20.0%
!! TAAGACTAGCATAATTTATT+AGG - chr3.4:84260339-84260358 MS.gene013541:intron 20.0%
!! TAATCAGACAAATATAACTT+TGG + chr3.4:84264771-84264790 None:intergenic 20.0%
!! TATATTGAAGGTTATCTTAA+AGG - chr3.4:84264437-84264456 MS.gene013541:intron 20.0%
!! TATCAACAACAATTGAAAAT+TGG + chr3.4:84260301-84260320 None:intergenic 20.0%
!! TTGATAAATGAAACATAGTT+AGG + chr3.4:84263885-84263904 None:intergenic 20.0%
!! TTTCTTTAATATTGTAACTG+TGG - chr3.4:84262426-84262445 MS.gene013541:intron 20.0%
!!! AGCTATTTTTTTTATATCTG+TGG + chr3.4:84262871-84262890 None:intergenic 20.0%
!!! AGTTTCTCTTAAGTTTTTAT+TGG + chr3.4:84261834-84261853 None:intergenic 20.0%
!!! CTTTTTCTAGCTTATATATA+GGG - chr3.4:84260564-84260583 MS.gene013541:intron 20.0%
!!! GATCAAAATATTTTTTTTGG+TGG + chr3.4:84261160-84261179 None:intergenic 20.0%
!!! GTTTATTGATTACCTTAAAA+GGG - chr3.4:84262042-84262061 MS.gene013541:intron 20.0%
!!! TAATAAATTATGCTAGTCTT+AGG + chr3.4:84260340-84260359 None:intergenic 20.0%
!!! TTAGTTCAGTTTTAAAAAAG+TGG - chr3.4:84263232-84263251 MS.gene013541:intron 20.0%
!!! TTTCTGAAAGAAGTTATTAT+TGG - chr3.4:84263585-84263604 MS.gene013541:intron 20.0%
! AAAGAAGTTATTATTGGAAC+TGG - chr3.4:84263591-84263610 MS.gene013541:intron 25.0%
! AAGCATAAAACTATCATATG+CGG - chr3.4:84260620-84260639 MS.gene013541:CDS 25.0%
! AATAAAATGGACGTCATATT+AGG - chr3.4:84263194-84263213 MS.gene013541:intron 25.0%
! ACTACTTAAAAACTTACGAT+CGG + chr3.4:84264191-84264210 None:intergenic 25.0%
! AGAATCTCACAAGAAATATT+GGG + chr3.4:84262549-84262568 None:intergenic 25.0%
! ATAAAATGGACGTCATATTA+GGG - chr3.4:84263195-84263214 MS.gene013541:intron 25.0%
! ATAGATTTCAGTTATATAGC+TGG - chr3.4:84264480-84264499 MS.gene013541:intron 25.0%
! ATGTAGAATTTGACTCTATT+GGG - chr3.4:84260784-84260803 MS.gene013541:CDS 25.0%
! CAACCAGAAAAAAACAAAAA+GGG + chr3.4:84263676-84263695 None:intergenic 25.0%
! CCTATATATAAGCTAGAAAA+AGG + chr3.4:84260566-84260585 None:intergenic 25.0%
! CTTATATTGTATAATCAGTC+GGG + chr3.4:84263910-84263929 None:intergenic 25.0%
! GCTTATTATAGCAGTTAATA+AGG - chr3.4:84263846-84263865 MS.gene013541:intron 25.0%
! GTATTCTTAACAAATGATGT+AGG - chr3.4:84262892-84262911 MS.gene013541:intron 25.0%
! TAATCAATAAACCAATCTCA+AGG + chr3.4:84262034-84262053 None:intergenic 25.0%
! TACTTCATCGATGAATATAA+TGG + chr3.4:84264077-84264096 None:intergenic 25.0%
! TCAACCAGAAAAAAACAAAA+AGG + chr3.4:84263677-84263696 None:intergenic 25.0%
! TGTCTTGTGAAATAATATGT+AGG - chr3.4:84263006-84263025 MS.gene013541:intron 25.0%
! TTATGCAGTATTTCTCTAAT+AGG + chr3.4:84264567-84264586 None:intergenic 25.0%
! TTCTCTAATAGGAAAATATG+CGG + chr3.4:84264556-84264575 None:intergenic 25.0%
! TTGGAAATACAATTAGGAAT+TGG + chr3.4:84263072-84263091 None:intergenic 25.0%
! TTTCAATGAAGAACAACAAA+TGG + chr3.4:84262526-84262545 None:intergenic 25.0%
!! AAGCTAGAAATTTTGTCAAA+TGG + chr3.4:84263537-84263556 None:intergenic 25.0%
!! AAGGCACAATATATTTTGTA+TGG - chr3.4:84261573-84261592 MS.gene013541:intron 25.0%
!! AGGCACAATATATTTTGTAT+GGG - chr3.4:84261574-84261593 MS.gene013541:intron 25.0%
!! AGGGAATTATCTAAGATTAT+GGG - chr3.4:84265077-84265096 MS.gene013541:CDS 25.0%
!! ATAGCCTTTGAAAACTAATA+CGG + chr3.4:84260597-84260616 None:intergenic 25.0%
!! GGTTTATTGATTACCTTAAA+AGG - chr3.4:84262041-84262060 MS.gene013541:intron 25.0%
!!! CAAAATATTTTTTTTGGTGG+TGG + chr3.4:84261157-84261176 None:intergenic 25.0%
!!! CCTTTTTCTAGCTTATATAT+AGG - chr3.4:84260563-84260582 MS.gene013541:intron 25.0%
!!! TTGTTTTTTCATATCATGAG+CGG - chr3.4:84264860-84264879 MS.gene013541:intron 25.0%
AAACATGAAAACTGAGTTCA+TGG - chr3.4:84264144-84264163 MS.gene013541:intron 30.0%
AACTTGATGAAGCAATACTT+CGG - chr3.4:84264361-84264380 MS.gene013541:CDS 30.0%
ACTAATTCTAGGCCTAATTT+CGG - chr3.4:84260419-84260438 MS.gene013541:intron 30.0%
AGAGGTTTACAAGCATAAAT+AGG + chr3.4:84262145-84262164 None:intergenic 30.0%
AGCATAAAACTATCATATGC+GGG - chr3.4:84260621-84260640 MS.gene013541:CDS 30.0%
AGTGTATATATGCTTAGTGA+TGG - chr3.4:84263728-84263747 MS.gene013541:intron 30.0%
ATACTGCATAATGAGAAGAA+AGG - chr3.4:84264576-84264595 MS.gene013541:intron 30.0%
ATGGATAACAACCTTACATT+GGG - chr3.4:84263430-84263449 MS.gene013541:intron 30.0%
ATTATGATGTACGTTACTGT+AGG - chr3.4:84262305-84262324 MS.gene013541:intron 30.0%
ATTGTAACTGTGGTCAATTT+GGG - chr3.4:84262436-84262455 MS.gene013541:intron 30.0%
CAGAATCTCACAAGAAATAT+TGG + chr3.4:84262550-84262569 None:intergenic 30.0%
CTGGGAAAATTCAAAAAACA+TGG + chr3.4:84264653-84264672 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr3.4:84261112-84261131 MS.gene013541:CDS 30.0%
GATGTAGAATTTGACTCTAT+TGG - chr3.4:84260783-84260802 MS.gene013541:CDS 30.0%
GATGTCATTCTCTTAATGTT+AGG + chr3.4:84262184-84262203 None:intergenic 30.0%
GGTTCGTTAGTTAATTAAAG+AGG + chr3.4:84262163-84262182 None:intergenic 30.0%
TAACTGCTATAATAAGCACT+TGG + chr3.4:84263843-84263862 None:intergenic 30.0%
TACAGTGTGATTACAATAGT+TGG + chr3.4:84261334-84261353 None:intergenic 30.0%
TACTGCATAATGAGAAGAAA+GGG - chr3.4:84264577-84264596 MS.gene013541:intron 30.0%
TATTCAAACCAATTCCTATG+AGG - chr3.4:84260236-84260255 MS.gene013541:CDS 30.0%
TATTGTAACTGTGGTCAATT+TGG - chr3.4:84262435-84262454 MS.gene013541:intron 30.0%
TCCAGTTTAGAAAGAGTAAA+AGG - chr3.4:84263647-84263666 MS.gene013541:intron 30.0%
TCTATTTGATCTTTGCAAGA+AGG - chr3.4:84264530-84264549 MS.gene013541:intron 30.0%
TCTTCATATTCCATTTGCTT+GGG - chr3.4:84262345-84262364 MS.gene013541:intron 30.0%
TCTTTCAGAAATAGTGCATT+CGG + chr3.4:84263576-84263595 None:intergenic 30.0%
TGTAGAATTTGACTCTATTG+GGG - chr3.4:84260785-84260804 MS.gene013541:CDS 30.0%
TGTTGTTATAGAACCAATAC+AGG + chr3.4:84263759-84263778 None:intergenic 30.0%
TTAAAAAATGGGTACCTCAT+AGG + chr3.4:84260253-84260272 None:intergenic 30.0%
TTATTTCACAAGACAAAGCA+AGG + chr3.4:84263001-84263020 None:intergenic 30.0%
TTCTACTATAACCTTTGCTT+AGG + chr3.4:84262390-84262409 None:intergenic 30.0%
TTCTTCATATTCCATTTGCT+TGG - chr3.4:84262344-84262363 MS.gene013541:intron 30.0%
TTCTTCCATCCATCTATTTA+AGG - chr3.4:84263511-84263530 MS.gene013541:intron 30.0%
TTGAAAACTAATACGGAACA+TGG + chr3.4:84260590-84260609 None:intergenic 30.0%
! AAAACTGAAGCACTAATTCT+AGG - chr3.4:84260408-84260427 MS.gene013541:intron 30.0%
! AAACAGCATATTTTCACTTC+TGG + chr3.4:84264672-84264691 None:intergenic 30.0%
! AACACACTTACCAAGTTTTT+GGG + chr3.4:84261036-84261055 None:intergenic 30.0%
! AACAGCATATTTTCACTTCT+GGG + chr3.4:84264671-84264690 None:intergenic 30.0%
! AATATTTGTCTGTTTTGCAG+TGG - chr3.4:84264015-84264034 MS.gene013541:intron 30.0%
! ACCTTTTACTCTTTCTAAAC+TGG + chr3.4:84263651-84263670 None:intergenic 30.0%
! ATAGTTTCTTTTGCTGAGAA+GGG - chr3.4:84261494-84261513 MS.gene013541:intron 30.0%
! CAGGGAATTATCTAAGATTA+TGG - chr3.4:84265076-84265095 MS.gene013541:CDS 30.0%
! GATGTGGGTTTTTATATGTT+GGG + chr3.4:84262497-84262516 None:intergenic 30.0%
! GGAATTATCTAAGATTATGG+GGG - chr3.4:84265079-84265098 MS.gene013541:CDS 30.0%
! GGGAATTATCTAAGATTATG+GGG - chr3.4:84265078-84265097 MS.gene013541:CDS 30.0%
! TATATAGCTGGTTTATGCAA+GGG - chr3.4:84264492-84264511 MS.gene013541:intron 30.0%
! TCATCGATGAATATAATGGA+TGG + chr3.4:84264073-84264092 None:intergenic 30.0%
! TTATATAGCTGGTTTATGCA+AGG - chr3.4:84264491-84264510 MS.gene013541:intron 30.0%
! TTCATCCGTTTGACAATTTT+CGG + chr3.4:84260390-84260409 None:intergenic 30.0%
!! ATGTGTGGTTATTTCTTTGA+AGG - chr3.4:84263791-84263810 MS.gene013541:intron 30.0%
!! TAGGAATTGGTTTGAATAAG+AGG + chr3.4:84260234-84260253 None:intergenic 30.0%
!! TGCTTGATTTATTTTCGTGT+TGG + chr3.4:84261623-84261642 None:intergenic 30.0%
!!! AGAAAGCATCGACAATTTTA+TGG + chr3.4:84261285-84261304 None:intergenic 30.0%
!!! GATGAAGTAGACAGTTTTTT+GGG - chr3.4:84264088-84264107 MS.gene013541:intron 30.0%
!!! GCATATGATAGTTTTATGCT+TGG + chr3.4:84260621-84260640 None:intergenic 30.0%
!!! TCTAGGGTTCCTATTTTTAT+TGG - chr3.4:84263169-84263188 MS.gene013541:intron 30.0%
!!! TCTCCCTTTTTGTTTTTTTC+TGG - chr3.4:84263670-84263689 MS.gene013541:intron 30.0%
!!! TGGAACTGGTTTTTGAAATA+AGG - chr3.4:84263605-84263624 MS.gene013541:intron 30.0%
!!! TGTTCCGTATTAGTTTTCAA+AGG - chr3.4:84260590-84260609 MS.gene013541:CDS 30.0%
AAACTTCTTGGACCACAAAA+GGG - chr3.4:84260885-84260904 MS.gene013541:intron 35.0%
AAAGAAACTATGTTGGTCGT+TGG + chr3.4:84261485-84261504 None:intergenic 35.0%
AAAGAGATTGCTAAACGTCT+TGG - chr3.4:84260204-84260223 MS.gene013541:CDS 35.0%
AAATAGATGGATGGAAGAAG+CGG + chr3.4:84263510-84263529 None:intergenic 35.0%
AATCAAGCATAGCAGAGATA+AGG - chr3.4:84261634-84261653 MS.gene013541:intron 35.0%
ACAAGCATAAATAGGACACA+GGG + chr3.4:84262137-84262156 None:intergenic 35.0%
ACAATAGCCAATCACAAACA+GGG + chr3.4:84263140-84263159 None:intergenic 35.0%
ACAGTAGATTAGCAAATGTG+TGG - chr3.4:84263776-84263795 MS.gene013541:intron 35.0%
ACATATAAAAACCCACATCC+AGG - chr3.4:84262498-84262517 MS.gene013541:intron 35.0%
ACTGCATAATGAGAAGAAAG+GGG - chr3.4:84264578-84264597 MS.gene013541:intron 35.0%
ACTTAAAAACTTACGATCGG+TGG + chr3.4:84264188-84264207 None:intergenic 35.0%
AGTAAGAAGAGTAGATCAGA+TGG - chr3.4:84261776-84261795 MS.gene013541:intron 35.0%
AGTCAAATTCTACATCGATG+TGG + chr3.4:84260779-84260798 None:intergenic 35.0%
ATAGATGAAGTAGCATGTGA+TGG + chr3.4:84262794-84262813 None:intergenic 35.0%
ATATATTGTGCCTTTACCAC+TGG + chr3.4:84261567-84261586 None:intergenic 35.0%
ATCACCATTAGATGAACAGA+TGG + chr3.4:84263397-84263416 None:intergenic 35.0%
ATCTATGCTTGACTACACTA+GGG - chr3.4:84262808-84262827 MS.gene013541:intron 35.0%
CATATATACACTCCTCAAGA+AGG + chr3.4:84263720-84263739 None:intergenic 35.0%
CGTGAATCAAGATTGTAAGA+AGG - chr3.4:84262709-84262728 MS.gene013541:intron 35.0%
CTAATTCTAGGCCTAATTTC+GGG - chr3.4:84260420-84260439 MS.gene013541:intron 35.0%
CTCAGCAAAAGAAACTATGT+TGG + chr3.4:84261492-84261511 None:intergenic 35.0%
GATGGATAACAACCTTACAT+TGG - chr3.4:84263429-84263448 MS.gene013541:intron 35.0%
GGAGATAAGTTAGCATAGAA+TGG + chr3.4:84260668-84260687 None:intergenic 35.0%
GTAGAATTTGACTCTATTGG+GGG - chr3.4:84260786-84260805 MS.gene013541:CDS 35.0%
GTCAGGATTTATAACATCAC+AGG + chr3.4:84260757-84260776 None:intergenic 35.0%
GTCTGGATATCCAATTTCAA+AGG + chr3.4:84264400-84264419 None:intergenic 35.0%
TAAAAAAGAGGGTGGAAACT+AGG - chr3.4:84261709-84261728 MS.gene013541:intron 35.0%
TACAAGCATAAATAGGACAC+AGG + chr3.4:84262138-84262157 None:intergenic 35.0%
TATATTGTGCCTTTACCACT+GGG + chr3.4:84261566-84261585 None:intergenic 35.0%
TATCAAACCTGATGAGCAAA+TGG - chr3.4:84261000-84261019 MS.gene013541:CDS 35.0%
TATCCAATTTCAAAGGCTTG+AGG + chr3.4:84264393-84264412 None:intergenic 35.0%
TATGCGAGTGTATAAAAGCT+TGG - chr3.4:84261304-84261323 MS.gene013541:intron 35.0%
TCACATCCAATTAGATGCTA+AGG - chr3.4:84265106-84265125 MS.gene013541:CDS 35.0%
TGATCGTGAAAAAGGTTAAC+AGG + chr3.4:84262685-84262704 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG - chr3.4:84261117-84261136 MS.gene013541:CDS 35.0%
TGTACGTTACTGTAGGAATA+TGG - chr3.4:84262312-84262331 MS.gene013541:intron 35.0%
TTATAGAACCAATACAGGAG+TGG + chr3.4:84263754-84263773 None:intergenic 35.0%
TTGAAATTGGATATCCAGAC+CGG - chr3.4:84264400-84264419 MS.gene013541:CDS 35.0%
! AAGATCAATTTGTGATGACG+TGG - chr3.4:84264825-84264844 MS.gene013541:intron 35.0%
! AAGCTAATTTGCCTTGAGAT+TGG - chr3.4:84262020-84262039 MS.gene013541:intron 35.0%
! AAGCTCATTTTCCCAATGTA+AGG + chr3.4:84263444-84263463 None:intergenic 35.0%
! AATGGCCTTAAATAGATGGA+TGG + chr3.4:84263519-84263538 None:intergenic 35.0%
! ATTGCTTCATCAAGTTCTGA+AGG + chr3.4:84264357-84264376 None:intergenic 35.0%
! CAACACACTTACCAAGTTTT+TGG + chr3.4:84261037-84261056 None:intergenic 35.0%
! CATAGTTTCTTTTGCTGAGA+AGG - chr3.4:84261493-84261512 MS.gene013541:intron 35.0%
! GAGCAGTTTTCATTAATGTG+AGG - chr3.4:84260976-84260995 MS.gene013541:intron 35.0%
! GGATGTGGGTTTTTATATGT+TGG + chr3.4:84262498-84262517 None:intergenic 35.0%
! GTCAAATGGCCTTAAATAGA+TGG + chr3.4:84263523-84263542 None:intergenic 35.0%
! TTTATTAGGGATGAGAGCAT+AGG - chr3.4:84260353-84260372 MS.gene013541:intron 35.0%
!! AAATTATGCTAGTCTTAGGC+AGG + chr3.4:84260336-84260355 None:intergenic 35.0%
!! TTGCTTCATCAAGTTCTGAA+GGG + chr3.4:84264356-84264375 None:intergenic 35.0%
!!! AGTTTCCACCCTCTTTTTTA+CGG + chr3.4:84261709-84261728 None:intergenic 35.0%
!!! ATGTGATGGCAGAGATTTTT+TGG + chr3.4:84262780-84262799 None:intergenic 35.0%
!!! CGATGAAGTAGACAGTTTTT+TGG - chr3.4:84264087-84264106 MS.gene013541:intron 35.0%
!!! TGGTTTTATGCAAAAACTCC+AGG + chr3.4:84260648-84260667 None:intergenic 35.0%
!!! TGTGATGGCAGAGATTTTTT+GGG + chr3.4:84262779-84262798 None:intergenic 35.0%
!!! TTTTTTCATATCATGAGCGG+TGG - chr3.4:84264863-84264882 MS.gene013541:intron 35.0%
AACCTGATGAGCAAATGGTT+TGG - chr3.4:84261005-84261024 MS.gene013541:CDS 40.0%
AACTTCTTGGACCACAAAAG+GGG - chr3.4:84260886-84260905 MS.gene013541:intron 40.0%
AAGAAGAGTAGATCAGATGG+AGG - chr3.4:84261779-84261798 MS.gene013541:intron 40.0%
AAGCATAAATAGGACACAGG+GGG + chr3.4:84262135-84262154 None:intergenic 40.0%
AAGGCCATCTGTTCATCTAA+TGG - chr3.4:84263390-84263409 MS.gene013541:intron 40.0%
AATAGCCAATCACAAACAGG+GGG + chr3.4:84263138-84263157 None:intergenic 40.0%
AATCACATCCCTAGAGACAA+AGG - chr3.4:84261804-84261823 MS.gene013541:intron 40.0%
AATGGACGTCATATTAGGGT+TGG - chr3.4:84263199-84263218 MS.gene013541:intron 40.0%
AATGGGTACCTCATAGGAAT+TGG + chr3.4:84260247-84260266 None:intergenic 40.0%
AATTCTACATCGATGTGGTC+AGG + chr3.4:84260774-84260793 None:intergenic 40.0%
ACAAGACCTGTTGTTATACG+CGG - chr3.4:84260089-84260108 MS.gene013541:CDS 40.0%
ACACATTTCAGCCCGAAATT+AGG + chr3.4:84260434-84260453 None:intergenic 40.0%
ACATCAAGAACGTCGTTTCA+TGG - chr3.4:84265020-84265039 MS.gene013541:CDS 40.0%
ACCTGATGAGCAAATGGTTT+GGG - chr3.4:84261006-84261025 MS.gene013541:CDS 40.0%
AGAGAGGGCTGATATATTGA+AGG - chr3.4:84264425-84264444 MS.gene013541:CDS 40.0%
AGCACTCACCGTAAAAAAGA+GGG - chr3.4:84261698-84261717 MS.gene013541:intron 40.0%
ATAAGGATACTGTGCTTAGG+TGG - chr3.4:84261651-84261670 MS.gene013541:intron 40.0%
ATATATCAGCCCTCTCTTTC+CGG + chr3.4:84264422-84264441 None:intergenic 40.0%
CAAACTTCTTGGACCACAAA+AGG - chr3.4:84260884-84260903 MS.gene013541:intron 40.0%
CAAGCATAAATAGGACACAG+GGG + chr3.4:84262136-84262155 None:intergenic 40.0%
CAATAGCCAATCACAAACAG+GGG + chr3.4:84263139-84263158 None:intergenic 40.0%
CAATGTTACATGTGACACTC+AGG - chr3.4:84262838-84262857 MS.gene013541:intron 40.0%
CACAATAGCCAATCACAAAC+AGG + chr3.4:84263141-84263160 None:intergenic 40.0%
CATAATATATGCAAGGTCCG+GGG - chr3.4:84261119-84261138 MS.gene013541:CDS 40.0%
CATCTATGCTTGACTACACT+AGG - chr3.4:84262807-84262826 MS.gene013541:intron 40.0%
GAAACATAGTTAGGTATGCC+AGG + chr3.4:84263876-84263895 None:intergenic 40.0%
GAGATAAGGATACTGTGCTT+AGG - chr3.4:84261648-84261667 MS.gene013541:intron 40.0%
GAGTGTCACATGTAACATTG+TGG + chr3.4:84262838-84262857 None:intergenic 40.0%
GCATAATATATGCAAGGTCC+GGG - chr3.4:84261118-84261137 MS.gene013541:CDS 40.0%
GTACTCATAGTAGGAGAGTT+GGG - chr3.4:84261673-84261692 MS.gene013541:intron 40.0%
TACTCATAGTAGGAGAGTTG+GGG - chr3.4:84261674-84261693 MS.gene013541:intron 40.0%
TAGCACTCACCGTAAAAAAG+AGG - chr3.4:84261697-84261716 MS.gene013541:intron 40.0%
TAGTTGCATAGAGCAACACA+AGG - chr3.4:84260463-84260482 MS.gene013541:intron 40.0%
TCAAATACCATTTAGCCCAG+TGG - chr3.4:84261548-84261567 MS.gene013541:intron 40.0%
TCTCTCTCTCTCTCATCTTT+GGG + chr3.4:84262646-84262665 None:intergenic 40.0%
TGGTATCACTTGCAGTTGTA+AGG - chr3.4:84261418-84261437 MS.gene013541:intron 40.0%
TTCTTCGATGATTCACGGTT+CGG + chr3.4:84260168-84260187 None:intergenic 40.0%
TTGCGCTCTTTACTGTATAC+AGG - chr3.4:84260722-84260741 MS.gene013541:CDS 40.0%
TTTGAAGGCTTGAAGCTGTT+CGG - chr3.4:84263806-84263825 MS.gene013541:intron 40.0%
! AAACTGAGTTCATGGCTCTA+TGG - chr3.4:84264152-84264171 MS.gene013541:CDS 40.0%
! AACTGAGTTCATGGCTCTAT+GGG - chr3.4:84264153-84264172 MS.gene013541:CDS 40.0%
! AACTGTGGTCAATTTGGGTT+TGG - chr3.4:84262441-84262460 MS.gene013541:intron 40.0%
! AAGCCTTATCACAGTATGTG+GGG + chr3.4:84261944-84261963 None:intergenic 40.0%
! CAAGCCTTATCACAGTATGT+GGG + chr3.4:84261945-84261964 None:intergenic 40.0%
! CTGTTTGTGATTGGCTATTG+TGG - chr3.4:84263139-84263158 MS.gene013541:intron 40.0%
! TATGTTGGGTCTGTTTCTCT+CGG + chr3.4:84262483-84262502 None:intergenic 40.0%
! TTCAGCGTGGTTCTTTGTTT+AGG - chr3.4:84263983-84264002 MS.gene013541:intron 40.0%
! TTGGTCTTCCTTTGTCTCTA+GGG + chr3.4:84261815-84261834 None:intergenic 40.0%
! TTTGTATGGGACAGAGTGTT+GGG - chr3.4:84261587-84261606 MS.gene013541:intron 40.0%
! TTTTCGCATGGCAAACTTCT+TGG - chr3.4:84260873-84260892 MS.gene013541:intron 40.0%
! TTTTGTATGGGACAGAGTGT+TGG - chr3.4:84261586-84261605 MS.gene013541:intron 40.0%
!! AAAAGCATTTGTCACCTGGT+GGG - chr3.4:84262955-84262974 MS.gene013541:intron 40.0%
!! AAGTTACTGGGTATTGGTCA+CGG - chr3.4:84260125-84260144 MS.gene013541:CDS 40.0%
!! ATGAGAGCATAGGTTGGTTT+CGG - chr3.4:84260363-84260382 MS.gene013541:intron 40.0%
!! ATTGGTCTTCCTTTGTCTCT+AGG + chr3.4:84261816-84261835 None:intergenic 40.0%
!! CATATTAGGGTTGGTTCTAG+TGG - chr3.4:84263208-84263227 MS.gene013541:intron 40.0%
!! CTTCCTCAAGCCTTTGAAAT+TGG - chr3.4:84264387-84264406 MS.gene013541:CDS 40.0%
!! GCAATGAGTTTGTTGCAGAA+CGG + chr3.4:84262087-84262106 None:intergenic 40.0%
!! GGTGGGATTTTAATAACACC+AGG - chr3.4:84262972-84262991 MS.gene013541:intron 40.0%
!! GGTGTTATTAAAATCCCACC+AGG + chr3.4:84262972-84262991 None:intergenic 40.0%
!!! ATTTTTTTTGGTGGTGGCCA+GGG + chr3.4:84261151-84261170 None:intergenic 40.0%
!!! GGTGATCTGTTGTTTTCAGA+TGG - chr3.4:84263411-84263430 MS.gene013541:intron 40.0%
!!! TATTTTTTTTGGTGGTGGCC+AGG + chr3.4:84261152-84261171 None:intergenic 40.0%
!!! TCCAGCTTTTAGAGCTATGA+GGG + chr3.4:84262263-84262282 None:intergenic 40.0%
!!! TTCCAGCTTTTAGAGCTATG+AGG + chr3.4:84262264-84262283 None:intergenic 40.0%
!!! TTCTGTTGCTTTTTTCAGCG+TGG - chr3.4:84263970-84263989 MS.gene013541:intron 40.0%
AAAACAAGTCTGGTCGTTGC+AGG + chr3.4:84260857-84260876 None:intergenic 45.0%
AAACAAGTCTGGTCGTTGCA+GGG + chr3.4:84260856-84260875 None:intergenic 45.0%
AAACTATCATATGCGGGACC+TGG - chr3.4:84260627-84260646 MS.gene013541:CDS 45.0%
AAAGCTATTGCCAAGGAGTC+TGG - chr3.4:84260954-84260973 MS.gene013541:intron 45.0%
AACAAATGGAGCCTGGATGT+GGG + chr3.4:84262512-84262531 None:intergenic 45.0%
AAGAACACCAGCACTCGATA+AGG + chr3.4:84263309-84263328 None:intergenic 45.0%
ACCATTTAGCCCAGTGGTAA+AGG - chr3.4:84261554-84261573 MS.gene013541:intron 45.0%
ACCTTTGTCGCAAGCAGATT+TGG - chr3.4:84264938-84264957 MS.gene013541:CDS 45.0%
ACTCACCGTAAAAAAGAGGG+TGG - chr3.4:84261701-84261720 MS.gene013541:intron 45.0%
ACTTCTTGGACCACAAAAGG+GGG - chr3.4:84260887-84260906 MS.gene013541:intron 45.0%
AGAACACCAGCACTCGATAA+GGG + chr3.4:84263308-84263327 None:intergenic 45.0%
AGCAGTTAATAAGGGCAACC+TGG - chr3.4:84263855-84263874 MS.gene013541:intron 45.0%
ATATCCAGACCGGAAAGAGA+GGG - chr3.4:84264410-84264429 MS.gene013541:CDS 45.0%
ATGTCTTCCGCGAAGTAGAA+AGG + chr3.4:84264971-84264990 None:intergenic 45.0%
CAAAAGGGGGTTCTGTTGTA+TGG - chr3.4:84260900-84260919 MS.gene013541:intron 45.0%
CAAACTCTCAGTCTGCTTGA+TGG - chr3.4:84263365-84263384 MS.gene013541:intron 45.0%
CACGATCGTGATCGTGAAAA+AGG + chr3.4:84262693-84262712 None:intergenic 45.0%
CCAACTGAGCTAAGCTCAAA+AGG + chr3.4:84261088-84261107 None:intergenic 45.0%
CCACATACTGTGATAAGGCT+TGG - chr3.4:84261943-84261962 MS.gene013541:intron 45.0%
CCTGATGAGCAAATGGTTTG+GGG - chr3.4:84261007-84261026 MS.gene013541:CDS 45.0%
CTATTGTGGTCAGGGATCTA+GGG - chr3.4:84263153-84263172 MS.gene013541:intron 45.0%
CTCTCTCTCTCTCTCATCTT+TGG + chr3.4:84262647-84262666 None:intergenic 45.0%
CTTATCACAGTATGTGGGGT+CGG + chr3.4:84261940-84261959 None:intergenic 45.0%
GAACCGTGAATCATCGAAGA+AGG - chr3.4:84260167-84260186 MS.gene013541:CDS 45.0%
GAAGAACAACAAATGGAGCC+TGG + chr3.4:84262519-84262538 None:intergenic 45.0%
GAGCCTTCTTCGATGATTCA+CGG + chr3.4:84260173-84260192 None:intergenic 45.0%
GCTGTGTATGTCCTAAGCAA+AGG - chr3.4:84262376-84262395 MS.gene013541:intron 45.0%
GCTTAGGTGGTACTCATAGT+AGG - chr3.4:84261664-84261683 MS.gene013541:intron 45.0%
GGTACTCATAGTAGGAGAGT+TGG - chr3.4:84261672-84261691 MS.gene013541:intron 45.0%
GGTTATCTTAAAGGGCGAGA+AGG - chr3.4:84264446-84264465 MS.gene013541:intron 45.0%
GGTTTATGCAAGGGTTACAC+TGG - chr3.4:84264501-84264520 MS.gene013541:intron 45.0%
GTGAGATTCTGTTGTAGCCT+GGG - chr3.4:84262559-84262578 MS.gene013541:intron 45.0%
GTTTCACTCACTGTTACGAG+TGG - chr3.4:84261398-84261417 MS.gene013541:intron 45.0%
TAAAAGGGCAAACACTCCTC+AGG - chr3.4:84262057-84262076 MS.gene013541:intron 45.0%
TCCAAATCTGCTTGCGACAA+AGG + chr3.4:84264942-84264961 None:intergenic 45.0%
TCGGGCCGAAAATTGTCAAA+CGG - chr3.4:84260382-84260401 MS.gene013541:intron 45.0%
TCGTTGCAAGATCCTTCTTG+AGG - chr3.4:84263705-84263724 MS.gene013541:intron 45.0%
TCTTCGATGATTCACGGTTC+GGG + chr3.4:84260167-84260186 None:intergenic 45.0%
TGAGATTCTGTTGTAGCCTG+GGG - chr3.4:84262560-84262579 MS.gene013541:intron 45.0%
TGTCTTCCGCGAAGTAGAAA+GGG + chr3.4:84264970-84264989 None:intergenic 45.0%
TGTGAGATTCTGTTGTAGCC+TGG - chr3.4:84262558-84262577 MS.gene013541:intron 45.0%
TTCTACTTCGCGGAAGACAT+CGG - chr3.4:84264971-84264990 MS.gene013541:CDS 45.0%
TTGAGCTTAGCTCAGTTGGT+AGG - chr3.4:84261089-84261108 MS.gene013541:CDS 45.0%
TTGCCATGCGAAAACAAGTC+TGG + chr3.4:84260867-84260886 None:intergenic 45.0%
TTTGGGGATGCCCAAAAACT+TGG - chr3.4:84261023-84261042 MS.gene013541:CDS 45.0%
! CCAAGCCTTATCACAGTATG+TGG + chr3.4:84261946-84261965 None:intergenic 45.0%
! CCTTTTGAGCTTAGCTCAGT+TGG - chr3.4:84261085-84261104 MS.gene013541:CDS 45.0%
! CTCAGTCTGCTTGATGGATA+AGG - chr3.4:84263371-84263390 MS.gene013541:intron 45.0%
! GGTTTGGCTCATTAGCCATT+AGG - chr3.4:84262457-84262476 MS.gene013541:intron 45.0%
! GTGATTGGCTATTGTGGTCA+GGG - chr3.4:84263145-84263164 MS.gene013541:intron 45.0%
! TACAACAGAACCCCCTTTTG+TGG + chr3.4:84260900-84260919 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - chr3.4:84261090-84261109 MS.gene013541:CDS 45.0%
! TGTGATTGGCTATTGTGGTC+AGG - chr3.4:84263144-84263163 MS.gene013541:intron 45.0%
! TTAGGGATGAGAGCATAGGT+TGG - chr3.4:84260357-84260376 MS.gene013541:intron 45.0%
!! AGCTATGAGGGCTGATTTTG+AGG + chr3.4:84262251-84262270 None:intergenic 45.0%
!! AGTTACTGGGTATTGGTCAC+GGG - chr3.4:84260126-84260145 MS.gene013541:CDS 45.0%
!! GAAAAGCATTTGTCACCTGG+TGG - chr3.4:84262954-84262973 MS.gene013541:intron 45.0%
!! GCAGAAAAGCATTTGTCACC+TGG - chr3.4:84262951-84262970 MS.gene013541:intron 45.0%
!! GGGAGGTTTTTCAGATACGA+AGG - chr3.4:84260062-84260081 MS.gene013541:CDS 45.0%
!! GTTGTTGTGTAGAGAGTGCT+CGG - chr3.4:84264304-84264323 MS.gene013541:CDS 45.0%
!! TATGAGGGCTGATTTTGAGG+TGG + chr3.4:84262248-84262267 None:intergenic 45.0%
!! TCAGGTTGAAGCTGCAATCA+GGG - chr3.4:84265058-84265077 MS.gene013541:CDS 45.0%
!! TGAGAGCATAGGTTGGTTTC+GGG - chr3.4:84260364-84260383 MS.gene013541:intron 45.0%
!! TTGTTGTGTAGAGAGTGCTC+GGG - chr3.4:84264305-84264324 MS.gene013541:CDS 45.0%
!!! ATGAGGGCTGATTTTGAGGT+GGG + chr3.4:84262247-84262266 None:intergenic 45.0%
!!! GAGGAGTGTTTGCCCTTTTA+AGG + chr3.4:84262057-84262076 None:intergenic 45.0%
!!! GCAGAGATTTTTTGGGTCAC+GGG + chr3.4:84262772-84262791 None:intergenic 45.0%
!!! GGCAGAGATTTTTTGGGTCA+CGG + chr3.4:84262773-84262792 None:intergenic 45.0%
!!! TTTTTGGGTCACGGGTATTG+CGG + chr3.4:84262764-84262783 None:intergenic 45.0%
AAATAGGACACAGGGGGAGA+GGG + chr3.4:84262129-84262148 None:intergenic 50.0%
AACAAGTCTGGTCGTTGCAG+GGG + chr3.4:84260855-84260874 None:intergenic 50.0%
ACCTGTTGTTATACGCGGCT+AGG - chr3.4:84260094-84260113 MS.gene013541:CDS 50.0%
ACTCACCGGCAATTAGTGGA+CGG + chr3.4:84262738-84262757 None:intergenic 50.0%
AGAAGGCCCTTTCTACTTCG+CGG - chr3.4:84264961-84264980 MS.gene013541:CDS 50.0%
AGAGGGTGGAAACTAGGCTT+AGG - chr3.4:84261715-84261734 MS.gene013541:intron 50.0%
AGTGATGGCCACTCCTGTAT+TGG - chr3.4:84263743-84263762 MS.gene013541:intron 50.0%
AGTGGCTGCCGTATTTAGCT+TGG - chr3.4:84264033-84264052 MS.gene013541:intron 50.0%
CAACAAATGGAGCCTGGATG+TGG + chr3.4:84262513-84262532 None:intergenic 50.0%
CAAGACAAAGCAAGGCAACC+TGG + chr3.4:84262993-84263012 None:intergenic 50.0%
CCCCAAACCATTTGCTCATC+AGG + chr3.4:84261010-84261029 None:intergenic 50.0%
CCTGTTGTTATACGCGGCTA+GGG - chr3.4:84260095-84260114 MS.gene013541:CDS 50.0%
CGACCCCACATACTGTGATA+AGG - chr3.4:84261938-84261957 MS.gene013541:intron 50.0%
GAAAACTGCTCCAGACTCCT+TGG + chr3.4:84260967-84260986 None:intergenic 50.0%
GAAGCTGTTCGGCTGCATAT+AGG - chr3.4:84263817-84263836 MS.gene013541:intron 50.0%
GAGATTCTGTTGTAGCCTGG+GGG - chr3.4:84262561-84262580 MS.gene013541:intron 50.0%
GATATCCAGACCGGAAAGAG+AGG - chr3.4:84264409-84264428 MS.gene013541:CDS 50.0%
GCAGATCAAGCCCAAGCAAA+TGG + chr3.4:84262358-84262377 None:intergenic 50.0%
GCCTTTACCACTGGGCTAAA+TGG + chr3.4:84261558-84261577 None:intergenic 50.0%
GCGTCGTTCATCAGATCATG+AGG - chr3.4:84264114-84264133 MS.gene013541:intron 50.0%
GCTATTGTGGTCAGGGATCT+AGG - chr3.4:84263152-84263171 MS.gene013541:intron 50.0%
GCTCGCAAAAGCTATTGCCA+AGG - chr3.4:84260947-84260966 MS.gene013541:intron 50.0%
GGCGCTAAGTTACTGGGTAT+TGG - chr3.4:84260119-84260138 MS.gene013541:CDS 50.0%
GTCAACTCACCGGCAATTAG+TGG + chr3.4:84262742-84262761 None:intergenic 50.0%
GTCGCAAGCAGATTTGGAGA+AGG - chr3.4:84264944-84264963 MS.gene013541:CDS 50.0%
GTTCTGTTGTATGGACCTCC+TGG - chr3.4:84260909-84260928 MS.gene013541:intron 50.0%
TAAATAGGACACAGGGGGAG+AGG + chr3.4:84262130-84262149 None:intergenic 50.0%
TCTCTCCCCCTGTTTGTGAT+TGG - chr3.4:84263130-84263149 MS.gene013541:intron 50.0%
TCTGCTTGCGACAAAGGTCT+AGG + chr3.4:84264936-84264955 None:intergenic 50.0%
TGAACACCCTTATCGAGTGC+TGG - chr3.4:84263299-84263318 MS.gene013541:intron 50.0%
! GAGTTCATGGCTCTATGGGA+TGG - chr3.4:84264157-84264176 MS.gene013541:CDS 50.0%
! GGCAATAGCTTTTGCGAGCA+TGG + chr3.4:84260946-84260965 None:intergenic 50.0%
! GTCTGTTTCTCTCGGCCTAA+TGG + chr3.4:84262475-84262494 None:intergenic 50.0%
!! CGACCAGACTTGTTTTCGCA+TGG - chr3.4:84260861-84260880 MS.gene013541:intron 50.0%
!! CTCAGGTTGAAGCTGCAATC+AGG - chr3.4:84265057-84265076 MS.gene013541:CDS 50.0%
!! GCCCTCATAGCTCTAAAAGC+TGG - chr3.4:84262259-84262278 MS.gene013541:intron 50.0%
!! TGTAGAGAGTGCTCGGGTTA+TGG - chr3.4:84264311-84264330 MS.gene013541:CDS 50.0%
ACGTCGTTTCATGGCGAGTC+AGG - chr3.4:84265029-84265048 MS.gene013541:CDS 55.0%
CCAATCTTTGTGCGCGTGAG+GGG - chr3.4:84260538-84260557 MS.gene013541:intron 55.0%
CCCAATCTTTGTGCGCGTGA+GGG - chr3.4:84260537-84260556 MS.gene013541:intron 55.0%
CCCTAGCCGCGTATAACAAC+AGG + chr3.4:84260098-84260117 None:intergenic 55.0%
CCCTCACGCGCACAAAGATT+GGG + chr3.4:84260540-84260559 None:intergenic 55.0%
GTTGCAGAACGGAAAGCCTG+AGG + chr3.4:84262076-84262095 None:intergenic 55.0%
GTTGTTATACGCGGCTAGGG+CGG - chr3.4:84260098-84260117 MS.gene013541:CDS 55.0%
TAGGGCGGCGCTAAGTTACT+GGG - chr3.4:84260113-84260132 MS.gene013541:CDS 55.0%
TGGCGAGTCAGGTGATTCTC+AGG - chr3.4:84265040-84265059 MS.gene013541:CDS 55.0%
TGTATGGACCTCCTGGCACT+GGG - chr3.4:84260916-84260935 MS.gene013541:intron 55.0%
TTCATGCATCTCTCTCCCCC+AGG + chr3.4:84262579-84262598 None:intergenic 55.0%
TTGTATGGACCTCCTGGCAC+TGG - chr3.4:84260915-84260934 MS.gene013541:intron 55.0%
! AGCATGGTTTTCCCAGTGCC+AGG + chr3.4:84260930-84260949 None:intergenic 55.0%
! ATGGTTTTCCCAGTGCCAGG+AGG + chr3.4:84260927-84260946 None:intergenic 55.0%
! CACGGTTCGGGTCGAGATAA+CGG + chr3.4:84260155-84260174 None:intergenic 55.0%
! CTCACCGGCAATTAGTGGAC+GGG + chr3.4:84262737-84262756 None:intergenic 55.0%
! GGGTATTGCGGTCAACTCAC+CGG + chr3.4:84262752-84262771 None:intergenic 55.0%
!!! AGGGCTGATTTTGAGGTGGG+CGG + chr3.4:84262244-84262263 None:intergenic 55.0%
CCCCTCACGCGCACAAAGAT+TGG + chr3.4:84260541-84260560 None:intergenic 60.0%
CTAGGGCGGCGCTAAGTTAC+TGG - chr3.4:84260112-84260131 MS.gene013541:CDS 60.0%
GATGTGCGAACAGCTCGCAC+AGG - chr3.4:84262614-84262633 MS.gene013541:intron 60.0%
GCCCAATCTTTGTGCGCGTG+AGG - chr3.4:84260536-84260555 MS.gene013541:intron 60.0%
GGCACCCGTCCACTAATTGC+CGG - chr3.4:84262730-84262749 MS.gene013541:intron 60.0%
TCAGCCCTCTCTTTCCGGTC+TGG + chr3.4:84264417-84264436 None:intergenic 60.0%
AAGGTCCGGGGCTCAAACCC+TGG - chr3.4:84261131-84261150 MS.gene013541:CDS 65.0%
GGTGGCCAGGGTTTGAGCCC+CGG + chr3.4:84261139-84261158 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 84260060 84265133 84260060 ID=MS.gene013541
chr3.4 mRNA 84260060 84265133 84260060 ID=MS.gene013541.t1;Parent=MS.gene013541
chr3.4 exon 84264936 84265133 84264936 ID=MS.gene013541.t1.exon1;Parent=MS.gene013541.t1
chr3.4 CDS 84264936 84265133 84264936 ID=cds.MS.gene013541.t1;Parent=MS.gene013541.t1
chr3.4 exon 84264149 84264449 84264149 ID=MS.gene013541.t1.exon2;Parent=MS.gene013541.t1
chr3.4 CDS 84264149 84264449 84264149 ID=cds.MS.gene013541.t1;Parent=MS.gene013541.t1
chr3.4 exon 84261000 84261158 84261000 ID=MS.gene013541.t1.exon3;Parent=MS.gene013541.t1
chr3.4 CDS 84261000 84261158 84261000 ID=cds.MS.gene013541.t1;Parent=MS.gene013541.t1
chr3.4 exon 84260582 84260877 84260582 ID=MS.gene013541.t1.exon4;Parent=MS.gene013541.t1
chr3.4 CDS 84260582 84260877 84260582 ID=cds.MS.gene013541.t1;Parent=MS.gene013541.t1
chr3.4 exon 84260060 84260263 84260060 ID=MS.gene013541.t1.exon5;Parent=MS.gene013541.t1
chr3.4 CDS 84260060 84260263 84260060 ID=cds.MS.gene013541.t1;Parent=MS.gene013541.t1
Gene Sequence

>MS.gene013541

ATGGGAGGTTTTTCAGATACGAAGGTTTTACAAGACCTGTTGTTATACGCGGCTAGGGCGGCGCTAAGTTACTGGGTATTGGTCACGGGTCTCCGTTATCTCGACCCGAACCGTGAATCATCGAAGAAGGCTCTTGAACAGAAGAAAGAGATTGCTAAACGTCTTGGTCGTCCTCTTATTCAAACCAATTCCTATGAGGTACCCATTTTTTAATACTTTTTTCATTTTAATTTTTGAACCAATTTTCAATTGTTGTTGATAATTCTGTGTTGTCCTGCCTAAGACTAGCATAATTTATTAGGGATGAGAGCATAGGTTGGTTTCGGGCCGAAAATTGTCAAACGGATGAAAACTGAAGCACTAATTCTAGGCCTAATTTCGGGCTGAAATGTGTTACTACATATAGTTGCATAGAGCAACACAAGGTTGAAGAAATAAATGAATAAAATTGTAATAAAAAAAAAAAAAACATTTTTGCCCAATCTTTGTGCGCGTGAGGGGTTCCTTTTTCTAGCTTATATATAGGGCCATGTTCCGTATTAGTTTTCAAAGGCTATACCAAGCATAAAACTATCATATGCGGGACCTGGAGTTTTTGCATAAAACCATTCTATGCTAACTTATCTCCAATATTACTTTTCCTTTTATTTAAGTGATTTAATTTGCGCTCTTTACTGTATACAGGATGTAATAGCCTGTGATGTTATAAATCCTGACCACATCGATGTAGAATTTGACTCTATTGGGGGTCTTGACACAATTAAACAAACTTTGTTTGAGCTTGTTATTCTACCCCTGCAACGACCAGACTTGTTTTCGCATGGCAAACTTCTTGGACCACAAAAGGGGGTTCTGTTGTATGGACCTCCTGGCACTGGGAAAACCATGCTCGCAAAAGCTATTGCCAAGGAGTCTGGAGCAGTTTTCATTAATGTGAGGATATCAAACCTGATGAGCAAATGGTTTGGGGATGCCCAAAAACTTGGTAAGTGTGTTGCATTCATATTGTAGCATATTTTAATTGTCCTTTTGAGCTTAGCTCAGTTGGTAGGGACAATGCATAATATATGCAAGGTCCGGGGCTCAAACCCTGGCCACCACCAAAAAAAATATTTTGATCATGAATTAAATTTTTGCTAATACATATGGATGTTTTTATTTTCTTAGTTCAGTAATTAGAACACTTATATTTTTCATAAAAGGCATGTCTACATGCAAAGATCCATAAAATTGTCGATGCTTTCTATGCGAGTGTATAAAAGCTTGGCATGCCAACTATTGTAATCACACTGTATAACTTCTCTGTTGCTATATTAGTTGAATGTGTGTTGCAATCTTGTTTCACTCACTGTTACGAGTGGTATCACTTGCAGTTGTAAGGTTAATTATGTCTACATTTGATAATATATGATTAGAGCTGTTCCAACGACCAACATAGTTTCTTTTGCTGAGAAGGGAATTTTCGTTCAACAGAAATTATAGTACAAATCAAATACCATTTAGCCCAGTGGTAAAGGCACAATATATTTTGTATGGGACAGAGTGTTGGGATGTAAAGAACCAACACGAAAATAAATCAAGCATAGCAGAGATAAGGATACTGTGCTTAGGTGGTACTCATAGTAGGAGAGTTGGGGTAGCACTCACCGTAAAAAAGAGGGTGGAAACTAGGCTTAGGTTGTTTGAGCTTGTAGAGAGAAGAGTTGTAGATTATATAGTAAGAAGAGTAGATCAGATGGAGGATAATCACATCCCTAGAGACAAAGGAAGACCAATAAAAACTTAAGAGAAACTTATTAAGATTGATCTAGGGATTAATGAGTTAGATAGAAATATTATATATGATAGAACATTATGGCGTCGTTTGATTCATGTAGCCGACCCCACATACTGTGATAAGGCTTGGTTCTTGTTGTAGAAATTATAGTACAAGTTTAATCTTTATTTTTGAATGTACAACAAGCTAATTTGCCTTGAGATTGGTTTATTGATTACCTTAAAAGGGCAAACACTCCTCAGGCTTTCCGTTCTGCAACAAACTCATTGCTCTATTCACTCAATGATATCCCTCTCCCCCTGTGTCCTATTTATGCTTGTAAACCTCTTTAATTAACTAACGAACCTAACATTAAGAGAATGACATCATAAAAACACCTTTTTTTTTTTTTTTTTTTAACATTACCGCCCACCTCAAAATCAGCCCTCATAGCTCTAAAAGCTGGAAGATATAAACATTTTTGTCTTGATTATGATGTACGTTACTGTAGGAATATGGCTGCAAATATTCTTCATATTCCATTTGCTTGGGCTTGATCTGCTGTGTATGTCCTAAGCAAAGGTTATAGTAGAACTTTCCGTTTGATCTTTTTCTTTAATATTGTAACTGTGGTCAATTTGGGTTTGGCTCATTAGCCATTAGGCCGAGAGAAACAGACCCAACATATAAAAACCCACATCCAGGCTCCATTTGTTGTTCTTCATTGAAACCCAATATTTCTTGTGAGATTCTGTTGTAGCCTGGGGGAGAGAGATGCATGAAAAAAGATCAGAGAGAGATGTGCGAACAGCTCGCACAGGCAAAAACCCAAAGATGAGAGAGAGAGAGAGAGAGAGCTAAGAAATCCTGTTAACCTTTTTCACGATCACGATCGTGAATCAAGATTGTAAGAAGGCACCCGTCCACTAATTGCCGGTGAGTTGACCGCAATACCCGTGACCCAAAAAATCTCTGCCATCACATGCTACTTCATCTATGCTTGACTACACTAGGGTTAACCACAATGTTACATGTGACACTCAGGCACACAACCACAGATATAAAAAAAATAGCTAGTATTCTTAACAAATGATGTAGGACTAAGAGTAAAGTACAAAGATCTCAAATCGACTATGCAGAAAAGCATTTGTCACCTGGTGGGATTTTAATAACACCAGGTTGCCTTGCTTTGTCTTGTGAAATAATATGTAGGTATACAATGTGACTGATCATTGAACTTGTTTGTTTAGCTTCCAATTCCTAATTGTATTTCCAATAGTTTTGTTGTAATTTATGTTGTTGAGTCTCTCTCTCTCTCTCCCCCTGTTTGTGATTGGCTATTGTGGTCAGGGATCTAGGGTTCCTATTTTTATTGGCTAATAAAATGGACGTCATATTAGGGTTGGTTCTAGTGGCTTAGTTCAGTTTTAAAAAAGTGGTTCAGTTCAAAACTATATAAAATGGTTCAGTTTTTTAAACTATTTGAACACCCTTATCGAGTGCTGGTGTTCTTTTAAACTGAACTTTGAAGTGAAGTCATTCTTTAAATCAAACTCTCAGTCTGCTTGATGGATAAGGCCATCTGTTCATCTAATGGTGATCTGTTGTTTTCAGATGGATAACAACCTTACATTGGGAAAATGAGCTTATAGCAAAACAACATCATTTGAAAATTGAAATAGAAGGGAATTCCGCTTCTTCCATCCATCTATTTAAGGCCATTTGACAAAATTTCTAGCTTTAAATGTAAATTCATTCCGAATGCACTATTTCTGAAAGAAGTTATTATTGGAACTGGTTTTTGAAATAAGGTTAAAATATAGCAAGCAATTCCAGTTTAGAAAGAGTAAAAGGTCTCCCTTTTTGTTTTTTTCTGGTTGAGTTTTTCATCGTTGCAAGATCCTTCTTGAGGAGTGTATATATGCTTAGTGATGGCCACTCCTGTATTGGTTCTATAACAACAGTAGATTAGCAAATGTGTGGTTATTTCTTTGAAGGCTTGAAGCTGTTCGGCTGCATATAGGCCAAGTGCTTATTATAGCAGTTAATAAGGGCAACCTGGCATACCTAACTATGTTTCATTTATCAAATCCCGACTGATTATACAATATAAGTTTGTGTATAATTTTTTATTTTGTATGTGATCAAATTATTTTCTGTTGCTTTTTTCAGCGTGGTTCTTTGTTTAGGTCTATCACTAATATTTGTCTGTTTTGCAGTGGCTGCCGTATTTAGCTTGGCTCATAAACTTCAGCCATCCATTATATTCATCGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTTCATCAGATCATGAGGCTGTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGATTCGCCACCGATCGTAAGTTTTTAAGTAGTTGTCGTTAAATTTTCATTTGCTGCGTAAATTTTCAAAACAAGTGACAGTTTTGACATATTTAGTTTCAGATTGTTGCTTTATGTTATTTTTTTGTTGTTGTGTAGAGAGTGCTCGGGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCGACTTCCTCAAGCCTTTGAAATTGGATATCCAGACCGGAAAGAGAGGGCTGATATATTGAAGGTTATCTTAAAGGGCGAGAAGGTTGAAGACAACATAGATTTCAGTTATATAGCTGGTTTATGCAAGGGTTACACTGGTTCAGATCTATTTGATCTTTGCAAGAAGGCCGCATATTTTCCTATTAGAGAAATACTGCATAATGAGAAGAAAGGGGAACAGTCCTGTGTTAGTATATTTTTCATTTTCTTCTACTTTATTCTCTGCCATGTTTTTTGAATTTTCCCAGAAGTGAAAATATGCTGTTTACAATATTCAATTTCTGTTGACTAGAACAGAACAAATTAATTGAGTATGTTTGTTTTATTTGATACTAGTATGCACCCAAAGTTATATTTGTCTGATTAAAGCATCTCATGTTAATGAGAGCAATTAATGTGAAAGATCAATTTGTGATGACGTGGATAGTCATTTAGTTGTTTTTTCATATCATGAGCGGTGGAGATGAAAATTACTGAGCTATTTTATTTATTTTTCACTTTTCAGGAACCTAGACCTTTGTCGCAAGCAGATTTGGAGAAGGCCCTTTCTACTTCGCGGAAGACATCGGTTGCTGCAAATGAATACAGTAGAATGACATCAAGAACGTCGTTTCATGGCGAGTCAGGTGATTCTCAGGTTGAAGCTGCAATCAGGGAATTATCTAAGATTATGGGGGTTTCTCACATCCAATTAGATGCTAAGGATTAA
Protein sequence

>MS.gene013541.t1

MGGFSDTKVLQDLLLYAARAALSYWVLVTGLRYLDPNRESSKKALEQKKEIAKRLGRPLIQTNSYEDVIACDVINPDHIDVEFDSIGGLDTIKQTLFELVILPLQRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAHKLQPSIIFIDEVDSFLGQRRSSDHEAVLNMKTEFMALWDGFATDQSARVMVLAATNRPSELDEAILRRLPQAFEIGYPDRKERADILKVILKGEKVEDNIDFSYIAGLCKGYTGSDLFDLCKKAAYFPIREILHNEKKGEQSCEPRPLSQADLEKALSTSRKTSVAANEYSRMTSRTSFHGESGDSQVEAAIRELSKIMGVSHIQLDAKD