Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06652.t1 | XP_003602312.1 | 99 | 385 | 4 | 0 | 1 | 385 | 1 | 385 | 2.10E-212 | 748 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06652.t1 | Q503W7 | 46.1 | 321 | 171 | 1 | 21 | 341 | 32 | 350 | 3.4e-78 | 293.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06652.t1 | G7J865 | 99.0 | 385 | 4 | 0 | 1 | 385 | 1 | 385 | 1.5e-212 | 748.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04915 | MS.gene06652 | 0.815176 | 1.06E-51 | -1.69E-46 |
MS.gene04917 | MS.gene06652 | 0.803312 | 3.70E-49 | -1.69E-46 |
MS.gene049230 | MS.gene06652 | 0.820353 | 7.18E-53 | -1.69E-46 |
MS.gene049378 | MS.gene06652 | 0.823246 | 1.54E-53 | -1.69E-46 |
MS.gene049438 | MS.gene06652 | 0.828203 | 1.02E-54 | -1.69E-46 |
MS.gene04984 | MS.gene06652 | 0.804124 | 2.51E-49 | -1.69E-46 |
MS.gene04991 | MS.gene06652 | -0.821046 | 4.97E-53 | -1.69E-46 |
MS.gene050623 | MS.gene06652 | -0.810307 | 1.23E-50 | -1.69E-46 |
MS.gene050762 | MS.gene06652 | 0.831242 | 1.87E-55 | -1.69E-46 |
MS.gene050763 | MS.gene06652 | 0.833967 | 3.93E-56 | -1.69E-46 |
MS.gene051122 | MS.gene06652 | 0.80924 | 2.09E-50 | -1.69E-46 |
MS.gene052077 | MS.gene06652 | 0.826084 | 3.29E-54 | -1.69E-46 |
MS.gene052641 | MS.gene06652 | 0.817997 | 2.47E-52 | -1.69E-46 |
MS.gene053577 | MS.gene06652 | 0.805294 | 1.43E-49 | -1.69E-46 |
MS.gene054379 | MS.gene06652 | 0.840272 | 9.61E-58 | -1.69E-46 |
MS.gene054542 | MS.gene06652 | 0.808742 | 2.67E-50 | -1.69E-46 |
MS.gene054930 | MS.gene06652 | 0.875984 | 2.00E-68 | -1.69E-46 |
MS.gene055505 | MS.gene06652 | 0.803935 | 2.75E-49 | -1.69E-46 |
MS.gene055701 | MS.gene06652 | 0.801396 | 9.18E-49 | -1.69E-46 |
MS.gene056849 | MS.gene06652 | 0.831468 | 1.64E-55 | -1.69E-46 |
MS.gene057199 | MS.gene06652 | 0.947285 | 9.05E-106 | -1.69E-46 |
MS.gene05761 | MS.gene06652 | 0.825815 | 3.82E-54 | -1.69E-46 |
MS.gene058278 | MS.gene06652 | 0.804734 | 1.87E-49 | -1.69E-46 |
MS.gene058399 | MS.gene06652 | 0.81109 | 8.33E-51 | -1.69E-46 |
MS.gene058503 | MS.gene06652 | 0.84172 | 4.00E-58 | -1.69E-46 |
MS.gene058505 | MS.gene06652 | 0.808874 | 2.50E-50 | -1.69E-46 |
MS.gene059285 | MS.gene06652 | 0.8473 | 1.26E-59 | -1.69E-46 |
MS.gene059511 | MS.gene06652 | 0.815541 | 8.77E-52 | -1.69E-46 |
MS.gene059687 | MS.gene06652 | 0.8082 | 3.48E-50 | -1.69E-46 |
MS.gene059899 | MS.gene06652 | 0.806133 | 9.54E-50 | -1.69E-46 |
MS.gene060084 | MS.gene06652 | 0.874685 | 5.57E-68 | -1.69E-46 |
MS.gene060495 | MS.gene06652 | 0.83534 | 1.78E-56 | -1.69E-46 |
MS.gene060683 | MS.gene06652 | 0.807673 | 4.51E-50 | -1.69E-46 |
MS.gene060940 | MS.gene06652 | 0.829335 | 5.45E-55 | -1.69E-46 |
MS.gene060943 | MS.gene06652 | 0.830601 | 2.68E-55 | -1.69E-46 |
MS.gene061002 | MS.gene06652 | 0.804725 | 1.88E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene06866 | MS.gene06652 | PPI |
MS.gene06652 | MS.gene028573 | PPI |
MS.gene97179 | MS.gene06652 | PPI |
MS.gene021847 | MS.gene06652 | PPI |
MS.gene97565 | MS.gene06652 | PPI |
MS.gene06652 | MS.gene057199 | PPI |
MS.gene40160 | MS.gene06652 | PPI |
MS.gene06652 | MS.gene97565 | PPI |
MS.gene06652 | MS.gene013541 | PPI |
MS.gene057503 | MS.gene06652 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06652.t1 | MTR_3g092070 | 98.961 | 385 | 4 | 0 | 1 | 385 | 1 | 385 | 0.0 | 783 |
MS.gene06652.t1 | MTR_3g092070 | 99.371 | 318 | 2 | 0 | 1 | 318 | 1 | 318 | 0.0 | 654 |
MS.gene06652.t1 | MTR_3g092080 | 79.167 | 384 | 75 | 3 | 5 | 385 | 8 | 389 | 0.0 | 615 |
MS.gene06652.t1 | MTR_3g092080 | 82.000 | 350 | 62 | 1 | 5 | 354 | 8 | 356 | 0.0 | 590 |
MS.gene06652.t1 | MTR_1g088750 | 51.211 | 289 | 133 | 3 | 47 | 328 | 856 | 1143 | 2.39e-91 | 298 |
MS.gene06652.t1 | MTR_1g088750 | 51.211 | 289 | 133 | 3 | 47 | 328 | 905 | 1192 | 3.68e-91 | 298 |
MS.gene06652.t1 | MTR_1g088730 | 51.211 | 289 | 133 | 3 | 47 | 328 | 899 | 1186 | 1.17e-90 | 296 |
MS.gene06652.t1 | MTR_8g099065 | 55.378 | 251 | 110 | 2 | 63 | 312 | 516 | 765 | 9.01e-90 | 288 |
MS.gene06652.t1 | MTR_3g089100 | 52.290 | 262 | 124 | 1 | 43 | 303 | 859 | 1120 | 4.05e-87 | 286 |
MS.gene06652.t1 | MTR_3g089100 | 52.290 | 262 | 124 | 1 | 43 | 303 | 864 | 1125 | 5.52e-87 | 286 |
MS.gene06652.t1 | MTR_3g089100 | 52.290 | 262 | 124 | 1 | 43 | 303 | 893 | 1154 | 6.76e-87 | 286 |
MS.gene06652.t1 | MTR_5g009840 | 53.600 | 250 | 114 | 2 | 63 | 311 | 498 | 746 | 2.71e-85 | 276 |
MS.gene06652.t1 | MTR_6g033740 | 53.629 | 248 | 112 | 3 | 63 | 309 | 482 | 727 | 6.31e-82 | 267 |
MS.gene06652.t1 | MTR_1g099470 | 43.505 | 331 | 155 | 4 | 63 | 364 | 416 | 743 | 3.65e-79 | 258 |
MS.gene06652.t1 | MTR_1g099480 | 43.675 | 332 | 154 | 5 | 63 | 364 | 450 | 778 | 1.68e-77 | 254 |
MS.gene06652.t1 | MTR_1g101870 | 51.613 | 248 | 118 | 2 | 63 | 309 | 487 | 733 | 8.66e-76 | 251 |
MS.gene06652.t1 | MTR_1g101870 | 51.613 | 248 | 118 | 2 | 63 | 309 | 539 | 785 | 9.44e-76 | 251 |
MS.gene06652.t1 | MTR_4g074920 | 41.049 | 324 | 159 | 5 | 41 | 359 | 638 | 934 | 8.48e-70 | 236 |
MS.gene06652.t1 | MTR_8g099065 | 60.109 | 183 | 71 | 2 | 63 | 244 | 516 | 697 | 2.04e-67 | 226 |
MS.gene06652.t1 | MTR_7g075520 | 41.100 | 309 | 165 | 7 | 40 | 336 | 162 | 465 | 2.67e-62 | 207 |
MS.gene06652.t1 | MTR_1g099480 | 55.191 | 183 | 81 | 1 | 63 | 244 | 450 | 632 | 5.02e-59 | 202 |
MS.gene06652.t1 | MTR_6g023875 | 41.852 | 270 | 148 | 6 | 80 | 344 | 381 | 646 | 1.44e-56 | 196 |
MS.gene06652.t1 | MTR_6g023855 | 42.029 | 276 | 140 | 8 | 80 | 344 | 245 | 511 | 3.24e-56 | 192 |
MS.gene06652.t1 | MTR_4g096870 | 39.350 | 277 | 152 | 7 | 80 | 345 | 118 | 389 | 2.31e-55 | 187 |
MS.gene06652.t1 | MTR_4g011810 | 37.736 | 265 | 150 | 5 | 81 | 332 | 242 | 504 | 3.32e-50 | 176 |
MS.gene06652.t1 | MTR_2g086160 | 40.435 | 230 | 130 | 5 | 80 | 306 | 131 | 356 | 5.13e-49 | 171 |
MS.gene06652.t1 | MTR_2g086160 | 41.667 | 216 | 119 | 5 | 80 | 292 | 131 | 342 | 1.80e-48 | 167 |
MS.gene06652.t1 | MTR_6g023865 | 36.934 | 287 | 152 | 7 | 80 | 344 | 157 | 436 | 5.07e-48 | 169 |
MS.gene06652.t1 | MTR_4g053350 | 40.435 | 230 | 130 | 5 | 80 | 306 | 126 | 351 | 9.25e-48 | 168 |
MS.gene06652.t1 | MTR_4g053350 | 40.435 | 230 | 130 | 5 | 80 | 306 | 126 | 351 | 1.08e-47 | 168 |
MS.gene06652.t1 | MTR_3g117230 | 38.525 | 244 | 142 | 4 | 67 | 305 | 125 | 365 | 5.36e-46 | 162 |
MS.gene06652.t1 | MTR_3g112260 | 38.115 | 244 | 143 | 4 | 67 | 305 | 122 | 362 | 1.78e-45 | 161 |
MS.gene06652.t1 | MTR_1g063380 | 40.000 | 235 | 131 | 5 | 77 | 306 | 200 | 429 | 4.16e-45 | 166 |
MS.gene06652.t1 | MTR_1g063380 | 35.547 | 256 | 149 | 6 | 80 | 325 | 477 | 726 | 2.69e-43 | 161 |
MS.gene06652.t1 | MTR_7g101870 | 39.394 | 231 | 131 | 4 | 80 | 306 | 205 | 430 | 2.97e-44 | 164 |
MS.gene06652.t1 | MTR_7g101870 | 35.606 | 264 | 153 | 7 | 80 | 333 | 478 | 734 | 1.14e-43 | 162 |
MS.gene06652.t1 | MTR_2g095210 | 36.255 | 251 | 146 | 5 | 80 | 322 | 405 | 649 | 8.16e-44 | 162 |
MS.gene06652.t1 | MTR_2g095210 | 45.238 | 84 | 45 | 1 | 80 | 163 | 206 | 288 | 7.18e-14 | 73.6 |
MS.gene06652.t1 | MTR_4g094270 | 39.316 | 234 | 131 | 5 | 80 | 306 | 155 | 384 | 9.38e-43 | 154 |
MS.gene06652.t1 | MTR_6g023845 | 34.926 | 272 | 137 | 7 | 80 | 344 | 115 | 353 | 4.56e-40 | 146 |
MS.gene06652.t1 | MTR_2g095320 | 38.095 | 231 | 130 | 5 | 80 | 306 | 152 | 373 | 9.46e-40 | 150 |
MS.gene06652.t1 | MTR_2g095320 | 34.137 | 249 | 141 | 6 | 80 | 322 | 420 | 651 | 5.99e-38 | 145 |
MS.gene06652.t1 | MTR_3g062510 | 37.768 | 233 | 135 | 5 | 80 | 306 | 158 | 386 | 9.96e-40 | 146 |
MS.gene06652.t1 | MTR_1g083330 | 37.339 | 233 | 130 | 7 | 82 | 305 | 168 | 393 | 1.83e-38 | 143 |
MS.gene06652.t1 | MTR_4g033235 | 37.339 | 233 | 130 | 7 | 82 | 305 | 169 | 394 | 2.73e-38 | 142 |
MS.gene06652.t1 | MTR_1g095660 | 37.657 | 239 | 131 | 7 | 80 | 305 | 117 | 350 | 1.21e-37 | 140 |
MS.gene06652.t1 | MTR_7g099640 | 37.391 | 230 | 134 | 5 | 83 | 306 | 189 | 414 | 4.19e-37 | 139 |
MS.gene06652.t1 | MTR_7g099640 | 37.391 | 230 | 134 | 5 | 83 | 306 | 189 | 414 | 5.96e-37 | 139 |
MS.gene06652.t1 | MTR_7g089290 | 33.803 | 284 | 159 | 10 | 36 | 311 | 611 | 873 | 9.31e-37 | 142 |
MS.gene06652.t1 | MTR_1g069105 | 36.957 | 230 | 135 | 5 | 83 | 306 | 190 | 415 | 1.09e-36 | 138 |
MS.gene06652.t1 | MTR_7g089290 | 33.803 | 284 | 159 | 10 | 36 | 311 | 639 | 901 | 1.15e-36 | 142 |
MS.gene06652.t1 | MTR_3g062510 | 44.324 | 185 | 93 | 5 | 80 | 258 | 158 | 338 | 2.67e-36 | 136 |
MS.gene06652.t1 | MTR_7g089040 | 34.335 | 233 | 140 | 6 | 81 | 306 | 685 | 911 | 1.40e-35 | 139 |
MS.gene06652.t1 | MTR_7g089040 | 32.889 | 225 | 123 | 7 | 120 | 326 | 422 | 636 | 9.70e-27 | 112 |
MS.gene06652.t1 | MTR_7g088830 | 33.906 | 233 | 141 | 6 | 81 | 306 | 658 | 884 | 1.13e-34 | 136 |
MS.gene06652.t1 | MTR_7g088830 | 30.800 | 250 | 158 | 8 | 86 | 331 | 401 | 639 | 1.67e-23 | 103 |
MS.gene06652.t1 | MTR_2g007010 | 35.685 | 241 | 144 | 6 | 83 | 317 | 240 | 475 | 1.75e-34 | 135 |
MS.gene06652.t1 | MTR_2g007010 | 30.043 | 233 | 156 | 4 | 80 | 308 | 527 | 756 | 2.96e-33 | 132 |
MS.gene06652.t1 | MTR_7g096060 | 37.815 | 238 | 126 | 8 | 81 | 305 | 240 | 468 | 2.52e-34 | 134 |
MS.gene06652.t1 | MTR_4g067100 | 37.295 | 244 | 138 | 8 | 74 | 306 | 371 | 610 | 2.59e-34 | 135 |
MS.gene06652.t1 | MTR_4g067100 | 37.295 | 244 | 138 | 8 | 74 | 306 | 371 | 610 | 2.64e-34 | 135 |
MS.gene06652.t1 | MTR_7g010800 | 37.768 | 233 | 130 | 6 | 81 | 305 | 206 | 431 | 5.22e-33 | 130 |
MS.gene06652.t1 | MTR_2g024440 | 31.615 | 291 | 177 | 8 | 80 | 357 | 213 | 494 | 5.81e-33 | 129 |
MS.gene06652.t1 | MTR_1g069105 | 42.021 | 188 | 99 | 5 | 83 | 264 | 190 | 373 | 6.22e-33 | 127 |
MS.gene06652.t1 | MTR_6g016600 | 36.752 | 234 | 140 | 4 | 76 | 305 | 312 | 541 | 7.72e-33 | 130 |
MS.gene06652.t1 | MTR_7g088850 | 35.021 | 237 | 150 | 3 | 81 | 314 | 282 | 517 | 8.60e-33 | 129 |
MS.gene06652.t1 | MTR_7g088850 | 33.790 | 219 | 131 | 7 | 94 | 305 | 30 | 241 | 8.69e-22 | 97.4 |
MS.gene06652.t1 | MTR_4g094662 | 32.573 | 307 | 177 | 9 | 78 | 368 | 226 | 518 | 8.79e-33 | 130 |
MS.gene06652.t1 | MTR_7g078570 | 38.494 | 239 | 123 | 10 | 81 | 305 | 192 | 420 | 9.13e-33 | 130 |
MS.gene06652.t1 | MTR_2g024440 | 31.615 | 291 | 177 | 8 | 80 | 357 | 295 | 576 | 1.16e-32 | 129 |
MS.gene06652.t1 | MTR_2g024440 | 31.615 | 291 | 177 | 8 | 80 | 357 | 296 | 577 | 1.27e-32 | 129 |
MS.gene06652.t1 | MTR_3g115110 | 33.119 | 311 | 174 | 13 | 81 | 379 | 249 | 537 | 2.75e-32 | 129 |
MS.gene06652.t1 | MTR_5g075340 | 33.681 | 288 | 170 | 8 | 80 | 363 | 228 | 498 | 6.35e-32 | 128 |
MS.gene06652.t1 | MTR_3g104480 | 32.827 | 329 | 178 | 10 | 44 | 363 | 197 | 491 | 7.36e-32 | 127 |
MS.gene06652.t1 | MTR_4g064350 | 36.402 | 239 | 128 | 9 | 81 | 305 | 320 | 548 | 9.80e-32 | 127 |
MS.gene06652.t1 | MTR_2g438140 | 35.622 | 233 | 135 | 6 | 81 | 305 | 226 | 451 | 1.71e-31 | 126 |
MS.gene06652.t1 | MTR_6g059690 | 37.238 | 239 | 126 | 9 | 81 | 305 | 197 | 425 | 1.72e-31 | 126 |
MS.gene06652.t1 | MTR_2g438140 | 35.622 | 233 | 135 | 6 | 81 | 305 | 286 | 511 | 3.43e-31 | 125 |
MS.gene06652.t1 | MTR_3g104470 | 33.449 | 287 | 170 | 8 | 81 | 363 | 224 | 493 | 4.67e-31 | 125 |
MS.gene06652.t1 | MTR_2g078630 | 32.075 | 265 | 158 | 8 | 83 | 330 | 68 | 327 | 5.20e-31 | 125 |
MS.gene06652.t1 | MTR_2g078630 | 32.075 | 265 | 158 | 8 | 83 | 330 | 596 | 855 | 1.07e-30 | 124 |
MS.gene06652.t1 | MTR_3g023900 | 29.719 | 249 | 152 | 5 | 80 | 308 | 530 | 775 | 6.04e-30 | 122 |
MS.gene06652.t1 | MTR_3g023900 | 32.661 | 248 | 149 | 9 | 83 | 317 | 236 | 478 | 4.51e-26 | 110 |
MS.gene06652.t1 | MTR_7g088980 | 34.127 | 252 | 151 | 5 | 81 | 320 | 136 | 384 | 9.28e-30 | 119 |
MS.gene06652.t1 | MTR_7g088980 | 34.127 | 252 | 151 | 5 | 81 | 320 | 218 | 466 | 2.53e-29 | 119 |
MS.gene06652.t1 | MTR_7g088980 | 36.800 | 125 | 74 | 4 | 178 | 299 | 49 | 171 | 4.45e-13 | 70.9 |
MS.gene06652.t1 | MTR_7g088980 | 34.127 | 252 | 151 | 5 | 81 | 320 | 286 | 534 | 3.09e-29 | 119 |
MS.gene06652.t1 | MTR_7g088980 | 36.726 | 226 | 127 | 8 | 84 | 299 | 20 | 239 | 1.49e-27 | 114 |
MS.gene06652.t1 | MTR_0376s0020 | 34.894 | 235 | 136 | 8 | 81 | 305 | 1 | 228 | 3.78e-29 | 119 |
MS.gene06652.t1 | MTR_1g028390 | 33.681 | 288 | 163 | 10 | 83 | 363 | 331 | 597 | 4.37e-29 | 119 |
MS.gene06652.t1 | MTR_7g088980 | 34.127 | 252 | 151 | 5 | 81 | 320 | 312 | 560 | 6.45e-29 | 118 |
MS.gene06652.t1 | MTR_7g088980 | 36.898 | 187 | 109 | 5 | 120 | 299 | 81 | 265 | 5.16e-25 | 107 |
MS.gene06652.t1 | MTR_5g069780 | 36.402 | 239 | 130 | 8 | 81 | 306 | 313 | 542 | 1.26e-28 | 118 |
MS.gene06652.t1 | MTR_3g462930 | 36.820 | 239 | 129 | 8 | 81 | 306 | 304 | 533 | 2.03e-28 | 117 |
MS.gene06652.t1 | MTR_8g023550 | 33.906 | 233 | 127 | 7 | 80 | 305 | 164 | 376 | 2.86e-28 | 115 |
MS.gene06652.t1 | MTR_8g099605 | 34.310 | 239 | 140 | 5 | 81 | 306 | 404 | 638 | 3.10e-28 | 117 |
MS.gene06652.t1 | MTR_8g099605 | 34.310 | 239 | 140 | 5 | 81 | 306 | 163 | 397 | 4.04e-28 | 116 |
MS.gene06652.t1 | MTR_2g101290 | 30.992 | 242 | 140 | 7 | 79 | 306 | 413 | 641 | 5.14e-28 | 116 |
MS.gene06652.t1 | MTR_2g101290 | 30.992 | 242 | 140 | 7 | 79 | 306 | 413 | 641 | 5.89e-28 | 116 |
MS.gene06652.t1 | MTR_3g023890 | 32.922 | 243 | 136 | 7 | 80 | 299 | 384 | 622 | 7.43e-28 | 115 |
MS.gene06652.t1 | MTR_3g023890 | 30.233 | 215 | 135 | 6 | 104 | 308 | 116 | 325 | 2.09e-20 | 93.6 |
MS.gene06652.t1 | MTR_7g088980 | 36.726 | 226 | 127 | 8 | 84 | 299 | 20 | 239 | 8.38e-28 | 114 |
MS.gene06652.t1 | MTR_3g096000 | 35.246 | 244 | 133 | 9 | 81 | 308 | 296 | 530 | 5.31e-27 | 113 |
MS.gene06652.t1 | MTR_5g075360 | 32.459 | 305 | 176 | 11 | 68 | 363 | 2 | 285 | 2.47e-26 | 110 |
MS.gene06652.t1 | MTR_5g075360 | 33.455 | 275 | 155 | 9 | 97 | 363 | 81 | 335 | 5.22e-26 | 109 |
MS.gene06652.t1 | MTR_5g075360 | 32.459 | 305 | 176 | 11 | 68 | 363 | 178 | 461 | 6.09e-26 | 110 |
MS.gene06652.t1 | MTR_5g075360 | 33.455 | 275 | 155 | 9 | 97 | 363 | 257 | 511 | 1.05e-25 | 109 |
MS.gene06652.t1 | MTR_7g088980 | 36.898 | 187 | 109 | 5 | 120 | 299 | 81 | 265 | 3.01e-25 | 107 |
MS.gene06652.t1 | MTR_8g469460 | 30.070 | 286 | 153 | 9 | 80 | 363 | 206 | 446 | 1.38e-22 | 100 |
MS.gene06652.t1 | MTR_8g056860 | 33.333 | 201 | 111 | 7 | 120 | 305 | 507 | 699 | 5.10e-22 | 98.6 |
MS.gene06652.t1 | MTR_3g104490 | 29.720 | 286 | 162 | 9 | 80 | 363 | 206 | 454 | 5.34e-22 | 98.2 |
MS.gene06652.t1 | MTR_5g074850 | 29.352 | 293 | 180 | 10 | 80 | 363 | 497 | 771 | 4.71e-20 | 92.8 |
MS.gene06652.t1 | MTR_1g080430 | 27.178 | 287 | 152 | 12 | 13 | 262 | 594 | 860 | 2.01e-18 | 87.8 |
MS.gene06652.t1 | MTR_1g080430 | 27.178 | 287 | 152 | 12 | 13 | 262 | 594 | 860 | 2.33e-18 | 87.8 |
MS.gene06652.t1 | MTR_4g088885 | 31.308 | 214 | 118 | 8 | 120 | 311 | 261 | 467 | 2.24e-17 | 84.3 |
MS.gene06652.t1 | MTR_4g083460 | 27.018 | 285 | 147 | 9 | 83 | 348 | 839 | 1081 | 2.97e-16 | 81.3 |
MS.gene06652.t1 | MTR_5g020530 | 36.735 | 147 | 80 | 6 | 117 | 258 | 386 | 524 | 3.14e-15 | 77.8 |
MS.gene06652.t1 | MTR_6g005760 | 32.911 | 158 | 87 | 4 | 117 | 266 | 233 | 379 | 7.32e-15 | 76.3 |
MS.gene06652.t1 | MTR_6g005760 | 32.911 | 158 | 87 | 4 | 117 | 266 | 361 | 507 | 1.04e-14 | 76.3 |
MS.gene06652.t1 | MTR_4g112600 | 47.561 | 82 | 37 | 3 | 84 | 162 | 3 | 81 | 2.70e-14 | 68.2 |
MS.gene06652.t1 | MTR_4g077880 | 34.810 | 158 | 84 | 6 | 117 | 266 | 367 | 513 | 4.81e-14 | 73.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06652.t1 | AT4G27680 | 75.452 | 387 | 93 | 1 | 1 | 385 | 1 | 387 | 0.0 | 605 |
MS.gene06652.t1 | AT5G53540 | 71.503 | 386 | 107 | 2 | 3 | 385 | 6 | 391 | 0.0 | 569 |
MS.gene06652.t1 | AT4G02480 | 54.373 | 263 | 118 | 2 | 47 | 308 | 927 | 1188 | 2.66e-91 | 298 |
MS.gene06652.t1 | AT1G02890 | 52.593 | 270 | 127 | 1 | 45 | 313 | 905 | 1174 | 2.78e-91 | 298 |
MS.gene06652.t1 | AT4G24860 | 53.025 | 281 | 126 | 2 | 59 | 333 | 768 | 1048 | 4.47e-90 | 293 |
MS.gene06652.t1 | AT1G64110 | 54.980 | 251 | 111 | 2 | 63 | 312 | 495 | 744 | 6.92e-90 | 288 |
MS.gene06652.t1 | AT1G64110 | 54.980 | 251 | 111 | 2 | 63 | 312 | 498 | 747 | 7.01e-90 | 288 |
MS.gene06652.t1 | AT1G64110 | 54.980 | 251 | 111 | 2 | 63 | 312 | 498 | 747 | 7.01e-90 | 288 |
MS.gene06652.t1 | AT1G64110 | 54.980 | 251 | 111 | 2 | 63 | 312 | 500 | 749 | 7.05e-90 | 288 |
MS.gene06652.t1 | AT1G64110 | 54.980 | 251 | 111 | 2 | 63 | 312 | 500 | 749 | 7.05e-90 | 288 |
MS.gene06652.t1 | AT4G24860 | 53.025 | 281 | 126 | 2 | 59 | 333 | 795 | 1075 | 9.11e-90 | 293 |
MS.gene06652.t1 | AT4G24860 | 53.025 | 281 | 126 | 2 | 59 | 333 | 793 | 1073 | 1.03e-89 | 293 |
MS.gene06652.t1 | AT4G24860 | 53.025 | 281 | 126 | 2 | 59 | 333 | 791 | 1071 | 1.04e-89 | 293 |
MS.gene06652.t1 | AT3G19740 | 45.427 | 328 | 172 | 4 | 39 | 359 | 657 | 984 | 1.25e-85 | 280 |
MS.gene06652.t1 | AT1G50140 | 51.953 | 256 | 122 | 1 | 60 | 314 | 668 | 923 | 5.23e-85 | 278 |
MS.gene06652.t1 | AT1G50140 | 51.953 | 256 | 122 | 1 | 60 | 314 | 668 | 923 | 5.23e-85 | 278 |
MS.gene06652.t1 | AT1G50140 | 51.953 | 256 | 122 | 1 | 60 | 314 | 690 | 945 | 7.05e-85 | 278 |
MS.gene06652.t1 | AT1G50140 | 51.953 | 256 | 122 | 1 | 60 | 314 | 690 | 945 | 7.05e-85 | 278 |
MS.gene06652.t1 | AT1G50140 | 51.953 | 256 | 122 | 1 | 60 | 314 | 690 | 945 | 7.05e-85 | 278 |
MS.gene06652.t1 | AT5G52882 | 51.894 | 264 | 124 | 3 | 59 | 321 | 492 | 753 | 5.34e-84 | 273 |
MS.gene06652.t1 | AT4G28000 | 49.825 | 285 | 133 | 4 | 63 | 346 | 499 | 774 | 1.43e-83 | 271 |
MS.gene06652.t1 | AT4G28000 | 49.825 | 285 | 133 | 4 | 63 | 346 | 499 | 774 | 3.41e-83 | 271 |
MS.gene06652.t1 | AT4G28000 | 49.825 | 285 | 133 | 4 | 63 | 346 | 497 | 772 | 3.47e-83 | 270 |
MS.gene06652.t1 | AT1G62130 | 47.445 | 274 | 130 | 3 | 39 | 312 | 704 | 963 | 1.78e-72 | 244 |
MS.gene06652.t1 | AT1G62130 | 47.445 | 274 | 130 | 3 | 39 | 312 | 711 | 970 | 1.99e-72 | 244 |
MS.gene06652.t1 | AT1G02890 | 45.926 | 270 | 117 | 2 | 45 | 313 | 905 | 1146 | 5.75e-71 | 241 |
MS.gene06652.t1 | AT2G45500 | 44.488 | 254 | 131 | 5 | 63 | 310 | 59 | 308 | 8.18e-65 | 211 |
MS.gene06652.t1 | AT2G45500 | 44.488 | 254 | 131 | 5 | 63 | 310 | 59 | 308 | 8.18e-65 | 211 |
MS.gene06652.t1 | AT2G45500 | 44.488 | 254 | 131 | 5 | 63 | 310 | 192 | 441 | 3.17e-63 | 210 |
MS.gene06652.t1 | AT2G45500 | 44.488 | 254 | 131 | 5 | 63 | 310 | 196 | 445 | 3.37e-63 | 210 |
MS.gene06652.t1 | AT2G45500 | 44.488 | 254 | 131 | 5 | 63 | 310 | 202 | 451 | 6.60e-63 | 209 |
MS.gene06652.t1 | AT2G34560 | 36.741 | 313 | 173 | 8 | 38 | 339 | 66 | 364 | 9.08e-56 | 188 |
MS.gene06652.t1 | AT3G27120 | 44.828 | 232 | 122 | 4 | 80 | 308 | 399 | 627 | 1.30e-55 | 194 |
MS.gene06652.t1 | AT2G34560 | 36.741 | 313 | 173 | 8 | 38 | 339 | 75 | 373 | 1.54e-55 | 187 |
MS.gene06652.t1 | AT1G80350 | 37.358 | 265 | 151 | 5 | 81 | 332 | 236 | 498 | 8.03e-50 | 176 |
MS.gene06652.t1 | AT5G43010 | 38.934 | 244 | 141 | 4 | 67 | 305 | 122 | 362 | 2.91e-47 | 166 |
MS.gene06652.t1 | AT1G45000 | 38.934 | 244 | 141 | 4 | 67 | 305 | 122 | 362 | 4.03e-47 | 166 |
MS.gene06652.t1 | AT2G27600 | 34.589 | 292 | 154 | 7 | 80 | 338 | 128 | 415 | 1.23e-46 | 165 |
MS.gene06652.t1 | AT3G09840 | 39.827 | 231 | 130 | 4 | 80 | 306 | 203 | 428 | 3.79e-45 | 166 |
MS.gene06652.t1 | AT3G09840 | 35.019 | 257 | 150 | 6 | 80 | 325 | 476 | 726 | 2.07e-42 | 158 |
MS.gene06652.t1 | AT5G03340 | 39.394 | 231 | 131 | 4 | 80 | 306 | 203 | 428 | 1.40e-44 | 164 |
MS.gene06652.t1 | AT5G03340 | 36.905 | 252 | 141 | 6 | 80 | 319 | 476 | 721 | 1.68e-44 | 164 |
MS.gene06652.t1 | AT3G53230 | 38.961 | 231 | 132 | 4 | 80 | 306 | 204 | 429 | 8.73e-44 | 162 |
MS.gene06652.t1 | AT3G53230 | 35.918 | 245 | 143 | 5 | 80 | 316 | 477 | 715 | 2.17e-42 | 158 |
MS.gene06652.t1 | AT5G19990 | 39.316 | 234 | 131 | 5 | 80 | 306 | 157 | 386 | 1.38e-42 | 154 |
MS.gene06652.t1 | AT5G19990 | 39.316 | 234 | 131 | 5 | 80 | 306 | 157 | 386 | 1.38e-42 | 154 |
MS.gene06652.t1 | AT5G19990 | 39.316 | 234 | 131 | 5 | 80 | 306 | 99 | 328 | 1.66e-42 | 152 |
MS.gene06652.t1 | AT5G20000 | 39.316 | 234 | 131 | 5 | 80 | 306 | 157 | 386 | 1.78e-42 | 154 |
MS.gene06652.t1 | AT1G53750 | 39.056 | 233 | 130 | 6 | 80 | 305 | 164 | 391 | 8.56e-42 | 152 |
MS.gene06652.t1 | AT5G58290 | 37.768 | 233 | 135 | 5 | 80 | 306 | 151 | 379 | 4.37e-40 | 147 |
MS.gene06652.t1 | AT3G05530 | 37.339 | 233 | 130 | 7 | 82 | 305 | 169 | 394 | 1.23e-38 | 143 |
MS.gene06652.t1 | AT1G53780 | 38.197 | 233 | 130 | 6 | 80 | 304 | 335 | 561 | 1.36e-38 | 146 |
MS.gene06652.t1 | AT1G53780 | 38.197 | 233 | 130 | 6 | 80 | 304 | 336 | 562 | 1.45e-38 | 146 |
MS.gene06652.t1 | AT1G53780 | 38.197 | 233 | 130 | 6 | 80 | 304 | 336 | 562 | 1.45e-38 | 146 |
MS.gene06652.t1 | AT1G53780 | 38.197 | 233 | 130 | 6 | 80 | 304 | 357 | 583 | 1.73e-38 | 146 |
MS.gene06652.t1 | AT3G56690 | 35.714 | 238 | 142 | 6 | 81 | 312 | 721 | 953 | 1.32e-37 | 145 |
MS.gene06652.t1 | AT3G56690 | 29.582 | 311 | 203 | 6 | 2 | 308 | 310 | 608 | 5.41e-35 | 137 |
MS.gene06652.t1 | AT1G09100 | 36.910 | 233 | 131 | 7 | 82 | 305 | 168 | 393 | 2.50e-37 | 140 |
MS.gene06652.t1 | AT1G03000 | 34.000 | 250 | 156 | 7 | 76 | 319 | 650 | 896 | 1.70e-36 | 141 |
MS.gene06652.t1 | AT4G29040 | 36.522 | 230 | 136 | 5 | 83 | 306 | 187 | 412 | 3.83e-36 | 137 |
MS.gene06652.t1 | AT2G20140 | 36.522 | 230 | 136 | 5 | 83 | 306 | 187 | 412 | 9.44e-36 | 136 |
MS.gene06652.t1 | AT1G05910 | 36.864 | 236 | 136 | 7 | 80 | 306 | 377 | 608 | 7.09e-35 | 137 |
MS.gene06652.t1 | AT5G15250 | 37.712 | 236 | 126 | 8 | 81 | 305 | 221 | 446 | 6.02e-34 | 133 |
MS.gene06652.t1 | AT1G06430 | 37.288 | 236 | 133 | 6 | 78 | 305 | 214 | 442 | 1.49e-33 | 132 |
MS.gene06652.t1 | AT1G06430 | 37.288 | 236 | 133 | 6 | 78 | 305 | 214 | 442 | 1.49e-33 | 132 |
MS.gene06652.t1 | AT1G06430 | 37.288 | 236 | 133 | 6 | 78 | 305 | 214 | 442 | 1.49e-33 | 132 |
MS.gene06652.t1 | AT3G01610 | 33.610 | 241 | 149 | 5 | 80 | 315 | 524 | 758 | 1.66e-33 | 132 |
MS.gene06652.t1 | AT3G01610 | 35.223 | 247 | 144 | 6 | 83 | 317 | 232 | 474 | 7.76e-33 | 130 |
MS.gene06652.t1 | AT2G30950 | 37.339 | 233 | 131 | 6 | 81 | 305 | 228 | 453 | 1.83e-33 | 132 |
MS.gene06652.t1 | AT2G30950 | 37.339 | 233 | 131 | 6 | 81 | 305 | 224 | 449 | 1.85e-33 | 132 |
MS.gene06652.t1 | AT2G30950 | 37.339 | 233 | 131 | 6 | 81 | 305 | 224 | 449 | 1.85e-33 | 132 |
MS.gene06652.t1 | AT2G30950 | 37.339 | 233 | 131 | 6 | 81 | 305 | 224 | 449 | 1.85e-33 | 132 |
MS.gene06652.t1 | AT3G01610 | 33.610 | 241 | 149 | 5 | 80 | 315 | 524 | 758 | 1.86e-33 | 132 |
MS.gene06652.t1 | AT3G01610 | 35.223 | 247 | 144 | 6 | 83 | 317 | 232 | 474 | 8.06e-33 | 130 |
MS.gene06652.t1 | AT5G42270 | 33.548 | 310 | 174 | 12 | 81 | 379 | 247 | 535 | 2.45e-33 | 132 |
MS.gene06652.t1 | AT1G50250 | 33.548 | 310 | 174 | 12 | 81 | 379 | 259 | 547 | 4.97e-33 | 131 |
MS.gene06652.t1 | AT5G08470 | 33.086 | 269 | 171 | 6 | 83 | 348 | 834 | 1096 | 6.34e-33 | 131 |
MS.gene06652.t1 | AT5G08470 | 33.086 | 269 | 171 | 6 | 83 | 348 | 843 | 1105 | 7.32e-33 | 130 |
MS.gene06652.t1 | AT2G29080 | 37.553 | 237 | 127 | 8 | 81 | 305 | 319 | 546 | 4.76e-32 | 128 |
MS.gene06652.t1 | AT1G07510 | 36.820 | 239 | 127 | 9 | 81 | 305 | 324 | 552 | 1.05e-31 | 127 |
MS.gene06652.t1 | AT3G02450 | 36.364 | 231 | 135 | 6 | 81 | 305 | 331 | 555 | 1.45e-31 | 126 |
MS.gene06652.t1 | AT2G26140 | 33.798 | 287 | 169 | 8 | 81 | 363 | 224 | 493 | 1.80e-31 | 126 |
MS.gene06652.t1 | AT2G03670 | 35.426 | 223 | 131 | 7 | 86 | 299 | 24 | 242 | 8.95e-31 | 122 |
MS.gene06652.t1 | AT2G03670 | 36.842 | 114 | 71 | 1 | 81 | 194 | 283 | 395 | 1.73e-12 | 68.9 |
MS.gene06652.t1 | AT5G58870 | 36.626 | 243 | 132 | 8 | 77 | 306 | 322 | 555 | 1.24e-30 | 124 |
MS.gene06652.t1 | AT5G15250 | 34.483 | 261 | 123 | 9 | 81 | 305 | 221 | 469 | 1.75e-30 | 122 |
MS.gene06652.t1 | AT4G04180 | 31.174 | 247 | 149 | 6 | 80 | 314 | 315 | 552 | 2.99e-30 | 122 |
MS.gene06652.t1 | AT4G04180 | 31.174 | 247 | 149 | 6 | 80 | 314 | 310 | 547 | 3.19e-30 | 122 |
MS.gene06652.t1 | AT2G03670 | 35.426 | 223 | 131 | 7 | 86 | 299 | 24 | 242 | 4.16e-30 | 122 |
MS.gene06652.t1 | AT2G03670 | 32.174 | 230 | 151 | 3 | 81 | 306 | 283 | 511 | 2.82e-26 | 110 |
MS.gene06652.t1 | AT5G53170 | 32.653 | 294 | 176 | 9 | 74 | 363 | 352 | 627 | 1.66e-29 | 120 |
MS.gene06652.t1 | AT3G47060 | 34.959 | 246 | 138 | 8 | 81 | 313 | 322 | 558 | 7.60e-29 | 119 |
MS.gene06652.t1 | AT4G23940 | 34.959 | 246 | 136 | 7 | 81 | 310 | 427 | 664 | 1.52e-28 | 118 |
MS.gene06652.t1 | AT3G15120 | 31.667 | 240 | 147 | 7 | 83 | 308 | 718 | 954 | 3.09e-28 | 117 |
MS.gene06652.t1 | AT3G15120 | 31.667 | 240 | 147 | 7 | 83 | 308 | 728 | 964 | 3.12e-28 | 117 |
MS.gene06652.t1 | AT3G16290 | 30.992 | 242 | 140 | 7 | 79 | 306 | 405 | 633 | 1.08e-26 | 112 |
MS.gene06652.t1 | AT1G45000 | 38.562 | 153 | 90 | 2 | 67 | 216 | 122 | 273 | 3.07e-26 | 108 |
MS.gene06652.t1 | AT1G79560 | 35.644 | 202 | 107 | 7 | 120 | 306 | 527 | 720 | 8.47e-26 | 110 |
MS.gene06652.t1 | AT1G79560 | 35.644 | 202 | 107 | 7 | 120 | 306 | 527 | 720 | 8.71e-26 | 110 |
MS.gene06652.t1 | AT1G79560 | 35.644 | 202 | 107 | 7 | 120 | 306 | 527 | 720 | 9.23e-26 | 110 |
MS.gene06652.t1 | AT5G64580 | 34.568 | 243 | 136 | 9 | 81 | 308 | 313 | 547 | 1.32e-25 | 109 |
MS.gene06652.t1 | AT3G04340 | 31.658 | 199 | 117 | 8 | 73 | 262 | 776 | 964 | 5.97e-17 | 83.6 |
MS.gene06652.t1 | AT5G08470 | 34.161 | 161 | 100 | 5 | 83 | 242 | 843 | 998 | 1.27e-16 | 82.4 |
MS.gene06652.t1 | AT4G04910 | 30.806 | 211 | 117 | 8 | 120 | 308 | 251 | 454 | 1.29e-16 | 82.0 |
MS.gene06652.t1 | AT5G16930 | 34.969 | 163 | 77 | 7 | 118 | 267 | 397 | 543 | 1.83e-14 | 75.5 |
MS.gene06652.t1 | AT2G18330 | 32.877 | 146 | 87 | 4 | 117 | 258 | 383 | 521 | 2.36e-14 | 75.1 |
MS.gene06652.t1 | AT3G03060 | 32.075 | 159 | 89 | 4 | 117 | 267 | 384 | 531 | 2.70e-14 | 74.7 |
MS.gene06652.t1 | AT4G36580 | 32.877 | 146 | 87 | 4 | 117 | 258 | 380 | 518 | 1.85e-13 | 72.4 |
Find 106 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCCTCAAGCCTTTGAAAT+TGG | 0.177781 | 3.3:-76868648 | MS.gene06652:CDS |
ATATATCAGCCCTCTCTTTC+CGG | 0.226986 | 3.3:+76868616 | None:intergenic |
CAGGGAATTATCTAAGATTA+TGG | 0.229656 | 3.3:-76867959 | MS.gene06652:CDS |
TATATTGAAGGTTATCTTAA+AGG | 0.231299 | 3.3:-76868598 | MS.gene06652:CDS |
CAACACACTTACCAAGCTTT+TGG | 0.251388 | 3.3:+76872011 | None:intergenic |
ACCTTTGTCGCAGGCAGATT+TGG | 0.252995 | 3.3:-76868097 | MS.gene06652:CDS |
CTAGGGCGGCGCTAAGTTAC+TGG | 0.265505 | 3.3:-76872924 | MS.gene06652:CDS |
ATGTAGAATTTGACTCTATT+GGG | 0.269048 | 3.3:-76872261 | MS.gene06652:CDS |
CCCCAAACCATTTGCTCATC+AGG | 0.271211 | 3.3:+76872038 | None:intergenic |
ACCTGATGAGCAAATGGTTT+GGG | 0.311167 | 3.3:-76872039 | MS.gene06652:CDS |
TTATGCAGTATTTCTCTAAT+AGG | 0.315812 | 3.3:+76868471 | None:intergenic |
GATGTAGAATTTGACTCTAT+TGG | 0.317232 | 3.3:-76872262 | MS.gene06652:CDS |
AAACTGAGTTCATGGCTCTA+TGG | 0.320401 | 3.3:-76868883 | MS.gene06652:CDS |
CTCAGGTTGAAGCTGTAATC+AGG | 0.341431 | 3.3:-76867978 | MS.gene06652:CDS |
ACATCAAGAACGTCGTTTCA+TGG | 0.355841 | 3.3:-76868015 | MS.gene06652:CDS |
AAACATGAAAACTGAGTTCA+TGG | 0.362291 | 3.3:-76868891 | MS.gene06652:CDS |
TACTTCATCGATGAATATAA+TGG | 0.362913 | 3.3:+76868961 | None:intergenic |
AATGGGTACCTCATAGGAAT+TGG | 0.365618 | 3.3:+76872792 | None:intergenic |
TTCTTCGATGATTCACGGTT+CGG | 0.366779 | 3.3:+76872871 | None:intergenic |
AAAACAAGTCTGGTCGTTGC+AGG | 0.370845 | 3.3:+76872191 | None:intergenic |
TCTTCGATGATTCACGGTTC+GGG | 0.377468 | 3.3:+76872872 | None:intergenic |
AAAGCTATTGCCAAGGAGTC+TGG | 0.379922 | 3.3:-76872091 | MS.gene06652:CDS |
TTGTATGGACCTCCTGGCAC+TGG | 0.386661 | 3.3:-76872130 | MS.gene06652:CDS |
ACGTCGTTTCATGGCGAGTC+AGG | 0.388975 | 3.3:-76868006 | MS.gene06652:CDS |
TAGGAATTGGTTTGAATAAG+AGG | 0.390998 | 3.3:+76872805 | None:intergenic |
CAAACTTCTTGGACCACAAA+AGG | 0.392804 | 3.3:-76872161 | MS.gene06652:CDS |
TGTAGAGAGTGCTCGGGTTA+TGG | 0.397237 | 3.3:-76868724 | MS.gene06652:intron |
TTTAATCCTGAGCATCTACT+TGG | 0.407390 | 3.3:+76867923 | None:intergenic |
ATATTGAAGGTTATCTTAAA+GGG | 0.410430 | 3.3:-76868597 | MS.gene06652:CDS |
AACCTGATGAGCAAATGGTT+TGG | 0.428222 | 3.3:-76872040 | MS.gene06652:CDS |
CACGGTTCGGGTCGAGATAA+CGG | 0.430729 | 3.3:+76872884 | None:intergenic |
AGGGAATTATCTAAGATTAT+GGG | 0.432152 | 3.3:-76867958 | MS.gene06652:CDS |
AAACTTCTTGGACCACAAAA+GGG | 0.435723 | 3.3:-76872160 | MS.gene06652:CDS |
GAGCCTTCTTCGATGATTCA+CGG | 0.446293 | 3.3:+76872866 | None:intergenic |
TCCAAATCTGCCTGCGACAA+AGG | 0.458633 | 3.3:+76868096 | None:intergenic |
ATGTCTTCCGCGAAGTAGAA+AGG | 0.461125 | 3.3:+76868067 | None:intergenic |
GTTCTGTTGTATGGACCTCC+TGG | 0.464854 | 3.3:-76872136 | MS.gene06652:CDS |
ATAGATTTCAGTTATATAGC+TGG | 0.470990 | 3.3:-76868555 | MS.gene06652:CDS |
TCAGCCCTCTCTTTCCGGTC+TGG | 0.471982 | 3.3:+76868621 | None:intergenic |
TACTGCATAATGAGAAGAAA+GGG | 0.472605 | 3.3:-76868458 | MS.gene06652:CDS |
TCACATCCAAGTAGATGCTC+AGG | 0.475230 | 3.3:-76867929 | MS.gene06652:CDS |
TGGCGAGTCAGGTGATTCTC+AGG | 0.479528 | 3.3:-76867995 | MS.gene06652:CDS |
AGTGGCTGCCGTATTTAGCT+TGG | 0.481021 | 3.3:-76869002 | MS.gene06652:CDS |
TCTATTTGATCTTTGCAAGA+AGG | 0.483151 | 3.3:-76868505 | MS.gene06652:CDS |
TATCAAACCTGATGAGCAAA+TGG | 0.483375 | 3.3:-76872045 | MS.gene06652:CDS |
GTTGTTGTGTAGAGAGTGCT+CGG | 0.484415 | 3.3:-76868731 | MS.gene06652:intron |
CCCTAGCCGCGTATAACAAC+AGG | 0.485855 | 3.3:+76872941 | None:intergenic |
AATTCTACATCGATGTGGTC+AGG | 0.489405 | 3.3:+76872274 | None:intergenic |
TATTCAAACCAATTCCTATG+AGG | 0.495023 | 3.3:-76872800 | MS.gene06652:intron |
GAAAACCGCTCCAGACTCCT+TGG | 0.496212 | 3.3:+76872081 | None:intergenic |
TCTGCCTGCGACAAAGGTCT+AGG | 0.503149 | 3.3:+76868102 | None:intergenic |
ATACTGCATAATGAGAAGAA+AGG | 0.503244 | 3.3:-76868459 | MS.gene06652:CDS |
AAAGAGATTGCTAAACGTCT+TGG | 0.508962 | 3.3:-76872832 | MS.gene06652:CDS |
TTTGGGGATGCCCAAAAGCT+TGG | 0.509153 | 3.3:-76872022 | MS.gene06652:intron |
TTGCCATGCGAAAACAAGTC+TGG | 0.509217 | 3.3:+76872181 | None:intergenic |
GGCGCTAAGTTACTGGGTAT+TGG | 0.511795 | 3.3:-76872917 | MS.gene06652:CDS |
AACTGAGTTCATGGCTCTAT+GGG | 0.515199 | 3.3:-76868882 | MS.gene06652:CDS |
AAGTTACTGGGTATTGGTCA+CGG | 0.526475 | 3.3:-76872911 | MS.gene06652:CDS |
GGGAATTATCTAAGATTATG+GGG | 0.530906 | 3.3:-76867957 | MS.gene06652:CDS |
TATATAGCTGGTTTATGCAA+GGG | 0.532236 | 3.3:-76868543 | MS.gene06652:CDS |
TTTATGAGCCAAGCTAAATA+CGG | 0.532998 | 3.3:+76868994 | None:intergenic |
AGAGAGGGCTGATATATTGA+AGG | 0.534415 | 3.3:-76868610 | MS.gene06652:CDS |
GAACCGTGAATCATCGAAGA+AGG | 0.537058 | 3.3:-76872869 | MS.gene06652:CDS |
TTCTACTTCGCGGAAGACAT+CGG | 0.539207 | 3.3:-76868064 | MS.gene06652:CDS |
GGTTTATGCAAGGGTTACAC+TGG | 0.540877 | 3.3:-76868534 | MS.gene06652:CDS |
TGTCTTCCGCGAAGTAGAAA+GGG | 0.540884 | 3.3:+76868068 | None:intergenic |
GTCAGGATTTATAACATCAC+AGG | 0.543896 | 3.3:+76872291 | None:intergenic |
AGTTACTGGGTATTGGTCAC+GGG | 0.546408 | 3.3:-76872910 | MS.gene06652:CDS |
TTGAAATTGGATATCCAGAC+CGG | 0.547953 | 3.3:-76868635 | MS.gene06652:CDS |
TTATATAGCTGGTTTATGCA+AGG | 0.548540 | 3.3:-76868544 | MS.gene06652:CDS |
GTCTGGATATCCAATTTCAA+AGG | 0.556914 | 3.3:+76868638 | None:intergenic |
TGTAGAATTTGACTCTATTG+GGG | 0.558850 | 3.3:-76872260 | MS.gene06652:CDS |
ATTGCTTCATCAAGTTCTGA+AGG | 0.564553 | 3.3:+76868681 | None:intergenic |
CCTGTTGTTATACGCGGCTA+GGG | 0.564962 | 3.3:-76872941 | MS.gene06652:CDS |
GGTTATCTTAAAGGGCGAGA+AGG | 0.568954 | 3.3:-76868589 | MS.gene06652:CDS |
ACCTGTTGTTATACGCGGCT+AGG | 0.569819 | 3.3:-76872942 | MS.gene06652:CDS |
AAACAAGTCTGGTCGTTGCA+GGG | 0.572120 | 3.3:+76872192 | None:intergenic |
GAGTTCATGGCTCTATGGGA+TGG | 0.573516 | 3.3:-76868878 | MS.gene06652:CDS |
GTCGCAGGCAGATTTGGAGA+AGG | 0.576617 | 3.3:-76868091 | MS.gene06652:CDS |
TATCCAATTTCAAAGGCTTG+AGG | 0.578118 | 3.3:+76868645 | None:intergenic |
AACTTCTTGGACCACAAAAG+GGG | 0.581082 | 3.3:-76872159 | MS.gene06652:CDS |
TAGGGCGGCGCTAAGTTACT+GGG | 0.582080 | 3.3:-76872923 | MS.gene06652:CDS |
TCATCGATGAATATAATGGA+TGG | 0.591454 | 3.3:+76868965 | None:intergenic |
GGAACCTAGACCTTTGTCGC+AGG | 0.591455 | 3.3:-76868106 | MS.gene06652:CDS |
TCAGGTTGAAGCTGTAATCA+GGG | 0.595334 | 3.3:-76867977 | MS.gene06652:CDS |
AACAAGTCTGGTCGTTGCAG+GGG | 0.601495 | 3.3:+76872193 | None:intergenic |
TGTATGGACCTCCTGGCACT+GGG | 0.603811 | 3.3:-76872129 | MS.gene06652:CDS |
AGAAGGCCCTTTCTACTTCG+CGG | 0.604409 | 3.3:-76868074 | MS.gene06652:CDS |
GATATCCAGACCGGAAAGAG+AGG | 0.613846 | 3.3:-76868626 | MS.gene06652:CDS |
AACTTGATGAAGCAATACTT+CGG | 0.627940 | 3.3:-76868674 | MS.gene06652:CDS |
GTTGTTATACGCGGCTAGGG+CGG | 0.629884 | 3.3:-76872938 | MS.gene06652:CDS |
TTGCTTCATCAAGTTCTGAA+GGG | 0.630399 | 3.3:+76868682 | None:intergenic |
GGAATTATCTAAGATTATGG+GGG | 0.631503 | 3.3:-76867956 | MS.gene06652:CDS |
TTCTCTAATAGGAAAATATG+CGG | 0.632360 | 3.3:+76868482 | None:intergenic |
GCGTCGTTCATCAGATCATG+AGG | 0.633325 | 3.3:-76868921 | MS.gene06652:CDS |
GTTCGTTCAAAGGACATGGG+AGG | 0.635319 | 3.3:-76872991 | None:intergenic |
ACTTCTTGGACCACAAAAGG+GGG | 0.638715 | 3.3:-76872158 | MS.gene06652:CDS |
GCTCGCAAAAGCTATTGCCA+AGG | 0.654543 | 3.3:-76872098 | MS.gene06652:CDS |
ACAAGACCTGTTGTTATACG+CGG | 0.658412 | 3.3:-76872947 | MS.gene06652:CDS |
ATATCCAGACCGGAAAGAGA+GGG | 0.660218 | 3.3:-76868625 | MS.gene06652:CDS |
TATTGCCAAGGAGTCTGGAG+CGG | 0.665724 | 3.3:-76872086 | MS.gene06652:CDS |
TTGTTGTGTAGAGAGTGCTC+GGG | 0.671596 | 3.3:-76868730 | MS.gene06652:intron |
GTAGAATTTGACTCTATTGG+GGG | 0.672250 | 3.3:-76872259 | MS.gene06652:CDS |
ACTGCATAATGAGAAGAAAG+GGG | 0.674597 | 3.3:-76868457 | MS.gene06652:CDS |
CCTGATGAGCAAATGGTTTG+GGG | 0.676141 | 3.3:-76872038 | MS.gene06652:CDS |
AGTCAAATTCTACATCGATG+TGG | 0.703743 | 3.3:+76872269 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAATCACTTAAATAAA+AGG | + | chr3.3:76868558-76868577 | None:intergenic | 10.0% |
!!! | ATGAAAAAAGTATTAAAAAA+TGG | + | chr3.3:76868129-76868148 | None:intergenic | 10.0% |
!!! | TGAAAAAAGTATTAAAAAAT+GGG | + | chr3.3:76868128-76868147 | None:intergenic | 10.0% |
!! | AATAAAAGGAAAAGTAATAT+TGG | + | chr3.3:76868544-76868563 | None:intergenic | 15.0% |
!! | ATTTGAAAATTGAAATAGAA+GGG | - | chr3.3:76871346-76871365 | MS.gene06652:intron | 15.0% |
!! | TATTAAAGAAAAAGATCAAA+CGG | + | chr3.3:76870272-76870291 | None:intergenic | 15.0% |
!! | TTATATATGATAGAACATTA+TGG | - | chr3.3:76869750-76869769 | MS.gene06652:intron | 15.0% |
!!! | ACACTTATATTTTTCATAAA+AGG | - | chr3.3:76869095-76869114 | MS.gene06652:intron | 15.0% |
!!! | ATTTTTATTGGCTAATAAAA+TGG | - | chr3.3:76871047-76871066 | MS.gene06652:intron | 15.0% |
!!! | CATGATCAAAATATTTTTTT+TGG | + | chr3.3:76869018-76869037 | None:intergenic | 15.0% |
!!! | TAAATTTTTGCTAATACATA+TGG | - | chr3.3:76869041-76869060 | MS.gene06652:intron | 15.0% |
!!! | TTATTTATTTTTCACATTTC+AGG | - | chr3.3:76872773-76872792 | MS.gene06652:intron | 15.0% |
!!! | TTTTATTAGCCAATAAAAAT+AGG | + | chr3.3:76871047-76871066 | None:intergenic | 15.0% |
!! | AAACTATTGGAAATACAATT+AGG | + | chr3.3:76870929-76870948 | None:intergenic | 20.0% |
!! | AAACTTATTAAGATTGATCT+AGG | - | chr3.3:76869704-76869723 | MS.gene06652:intron | 20.0% |
!! | AACTTATTAAGATTGATCTA+GGG | - | chr3.3:76869705-76869724 | MS.gene06652:intron | 20.0% |
!! | AAGACTAGCATAATTTATTA+GGG | - | chr3.3:76868204-76868223 | MS.gene06652:intron | 20.0% |
!! | AATCAGACAAATATAACTTT+GGG | + | chr3.3:76872635-76872654 | None:intergenic | 20.0% |
!! | AATGAAAAATATACTAACAC+AGG | + | chr3.3:76872475-76872494 | None:intergenic | 20.0% |
!! | ACTTATATTGTATAATCAGT+CGG | + | chr3.3:76871777-76871796 | None:intergenic | 20.0% |
!! | ATATTGAAGGTTATCTTAAA+GGG | - | chr3.3:76872303-76872322 | MS.gene06652:CDS | 20.0% |
!! | CAGTTCAAAACTATATAAAA+TGG | - | chr3.3:76871123-76871142 | MS.gene06652:intron | 20.0% |
!! | CATTTGAAAATTGAAATAGA+AGG | - | chr3.3:76871345-76871364 | MS.gene06652:intron | 20.0% |
!! | CTTATTATAGCAGTTAATAA+GGG | - | chr3.3:76871713-76871732 | MS.gene06652:intron | 20.0% |
!! | TAAGACTAGCATAATTTATT+AGG | - | chr3.3:76868203-76868222 | MS.gene06652:intron | 20.0% |
!! | TAATCAGACAAATATAACTT+TGG | + | chr3.3:76872636-76872655 | None:intergenic | 20.0% |
!! | TATATTGAAGGTTATCTTAA+AGG | - | chr3.3:76872302-76872321 | MS.gene06652:CDS | 20.0% |
!! | TTGATAAATGAAACATAGTT+AGG | + | chr3.3:76871751-76871770 | None:intergenic | 20.0% |
!! | TTTCTTTAATATTGTAACTG+TGG | - | chr3.3:76870281-76870300 | MS.gene06652:intron | 20.0% |
!!! | AGCTATTTTTTTTATATCTG+TGG | + | chr3.3:76870722-76870741 | None:intergenic | 20.0% |
!!! | AGTTTCTCTTAAGTTTTTAT+TGG | + | chr3.3:76869689-76869708 | None:intergenic | 20.0% |
!!! | CTTTTTCTAGCTTATATATA+GGG | - | chr3.3:76868419-76868438 | MS.gene06652:intron | 20.0% |
!!! | GATCAAAATATTTTTTTTGG+TGG | + | chr3.3:76869015-76869034 | None:intergenic | 20.0% |
!!! | GTTTATTGATTACCTTAAAA+GGG | - | chr3.3:76869897-76869916 | MS.gene06652:intron | 20.0% |
!!! | TAATAAATTATGCTAGTCTT+AGG | + | chr3.3:76868204-76868223 | None:intergenic | 20.0% |
!!! | TTAGTTCAGTTTTAAAAAAG+TGG | - | chr3.3:76871098-76871117 | MS.gene06652:intron | 20.0% |
!!! | TTTCTGAAAGAAGTTATTAT+TGG | - | chr3.3:76871451-76871470 | MS.gene06652:intron | 20.0% |
! | AAAGAAGTTATTATTGGAAC+TGG | - | chr3.3:76871457-76871476 | MS.gene06652:intron | 25.0% |
! | AAGCATAAAACTATCATATG+CGG | - | chr3.3:76868475-76868494 | MS.gene06652:CDS | 25.0% |
! | AATAAAATGGACGTCATATT+AGG | - | chr3.3:76871060-76871079 | MS.gene06652:intron | 25.0% |
! | ACTACTTAAAAACTTACGAT+CGG | + | chr3.3:76872056-76872075 | None:intergenic | 25.0% |
! | AGAATCTCACAAGAAATATT+GGG | + | chr3.3:76870404-76870423 | None:intergenic | 25.0% |
! | ATAAAATGGACGTCATATTA+GGG | - | chr3.3:76871061-76871080 | MS.gene06652:intron | 25.0% |
! | ATAGATTTCAGTTATATAGC+TGG | - | chr3.3:76872345-76872364 | MS.gene06652:intron | 25.0% |
! | ATGTAGAATTTGACTCTATT+GGG | - | chr3.3:76868639-76868658 | MS.gene06652:CDS | 25.0% |
! | CAACCAGAAAAAAACAATAA+GGG | + | chr3.3:76871542-76871561 | None:intergenic | 25.0% |
! | CCTATATATAAGCTAGAAAA+AGG | + | chr3.3:76868421-76868440 | None:intergenic | 25.0% |
! | CTTATATTGTATAATCAGTC+GGG | + | chr3.3:76871776-76871795 | None:intergenic | 25.0% |
! | GCTTATTATAGCAGTTAATA+AGG | - | chr3.3:76871712-76871731 | MS.gene06652:intron | 25.0% |
! | GTATTCTTAACAAATGATGT+AGG | - | chr3.3:76870743-76870762 | MS.gene06652:intron | 25.0% |
! | TAATCAATAAACCAATCTCA+AGG | + | chr3.3:76869889-76869908 | None:intergenic | 25.0% |
! | TACTTCATCGATGAATATAA+TGG | + | chr3.3:76871942-76871961 | None:intergenic | 25.0% |
! | TATCACCAACAATTGAAAAT+TGG | + | chr3.3:76868165-76868184 | None:intergenic | 25.0% |
! | TCAACCAGAAAAAAACAATA+AGG | + | chr3.3:76871543-76871562 | None:intergenic | 25.0% |
! | TGTCTTGTGAAATAATATGT+AGG | - | chr3.3:76870857-76870876 | MS.gene06652:intron | 25.0% |
! | TTATGCAGTATTTCTCTAAT+AGG | + | chr3.3:76872432-76872451 | None:intergenic | 25.0% |
! | TTCTCTAATAGGAAAATATG+CGG | + | chr3.3:76872421-76872440 | None:intergenic | 25.0% |
! | TTGGAAATACAATTAGGAAT+TGG | + | chr3.3:76870923-76870942 | None:intergenic | 25.0% |
! | TTTCAATGAAGAACAACAAA+TGG | + | chr3.3:76870381-76870400 | None:intergenic | 25.0% |
!! | AAGGCACAATATATTTTGTA+TGG | - | chr3.3:76869428-76869447 | MS.gene06652:intron | 25.0% |
!! | AGGCACAATATATTTTGTAT+GGG | - | chr3.3:76869429-76869448 | MS.gene06652:intron | 25.0% |
!! | AGGGAATTATCTAAGATTAT+GGG | - | chr3.3:76872942-76872961 | MS.gene06652:CDS | 25.0% |
!! | ATAGCCTTTGAAAACTAATA+CGG | + | chr3.3:76868452-76868471 | None:intergenic | 25.0% |
!! | GGTTTATTGATTACCTTAAA+AGG | - | chr3.3:76869896-76869915 | MS.gene06652:intron | 25.0% |
!! | TTGAACCAATTTTCAATTGT+TGG | - | chr3.3:76868157-76868176 | MS.gene06652:intron | 25.0% |
!!! | CAAAATATTTTTTTTGGTGG+TGG | + | chr3.3:76869012-76869031 | None:intergenic | 25.0% |
!!! | CCTTTTTCTAGCTTATATAT+AGG | - | chr3.3:76868418-76868437 | MS.gene06652:intron | 25.0% |
!!! | TTGTTTTTTCATATCATGAG+CGG | - | chr3.3:76872725-76872744 | MS.gene06652:intron | 25.0% |
AAACATGAAAACTGAGTTCA+TGG | - | chr3.3:76872009-76872028 | MS.gene06652:intron | 30.0% | |
AACTTGATGAAGCAATACTT+CGG | - | chr3.3:76872226-76872245 | MS.gene06652:CDS | 30.0% | |
AGAGGTTTACAAGCATAAAT+AGG | + | chr3.3:76870000-76870019 | None:intergenic | 30.0% | |
AGCATAAAACTATCATATGC+GGG | - | chr3.3:76868476-76868495 | MS.gene06652:CDS | 30.0% | |
AGTGTATATATGCTTAGTGA+TGG | - | chr3.3:76871594-76871613 | MS.gene06652:intron | 30.0% | |
ATAAGAATACTGTGCTTAAG+TGG | - | chr3.3:76869506-76869525 | MS.gene06652:intron | 30.0% | |
ATACTGCATAATGAGAAGAA+AGG | - | chr3.3:76872441-76872460 | MS.gene06652:intron | 30.0% | |
ATGGATAACAACCTTACATT+GGG | - | chr3.3:76871296-76871315 | MS.gene06652:intron | 30.0% | |
ATTATGATGTACGTTACTGT+AGG | - | chr3.3:76870160-76870179 | MS.gene06652:intron | 30.0% | |
ATTGTAACTGTGGTCAATTT+GGG | - | chr3.3:76870291-76870310 | MS.gene06652:intron | 30.0% | |
CAGAATCTCACAAGAAATAT+TGG | + | chr3.3:76870405-76870424 | None:intergenic | 30.0% | |
CTGGGAAAATTCAAAAAACA+TGG | + | chr3.3:76872518-76872537 | None:intergenic | 30.0% | |
GACAATGCATAATATATGCA+AGG | - | chr3.3:76868967-76868986 | MS.gene06652:CDS | 30.0% | |
GATGTAGAATTTGACTCTAT+TGG | - | chr3.3:76868638-76868657 | MS.gene06652:CDS | 30.0% | |
GATGTCATTCTCTTAATGTT+AGG | + | chr3.3:76870039-76870058 | None:intergenic | 30.0% | |
GGTTCGTTAGTTAATTAAAG+AGG | + | chr3.3:76870018-76870037 | None:intergenic | 30.0% | |
TAACTGCTATAATAAGCACT+TGG | + | chr3.3:76871709-76871728 | None:intergenic | 30.0% | |
TACAGTGTGATTACAATAGT+TGG | + | chr3.3:76869189-76869208 | None:intergenic | 30.0% | |
TACTGCATAATGAGAAGAAA+GGG | - | chr3.3:76872442-76872461 | MS.gene06652:intron | 30.0% | |
TATTCAAACCAATTCCTATG+AGG | - | chr3.3:76868100-76868119 | MS.gene06652:CDS | 30.0% | |
TATTGTAACTGTGGTCAATT+TGG | - | chr3.3:76870290-76870309 | MS.gene06652:intron | 30.0% | |
TCCAGTTTAGAAAGAGTAAA+AGG | - | chr3.3:76871513-76871532 | MS.gene06652:intron | 30.0% | |
TCTATTTGATCTTTGCAAGA+AGG | - | chr3.3:76872395-76872414 | MS.gene06652:intron | 30.0% | |
TCTTCATATTCCATTTGCTT+GGG | - | chr3.3:76870200-76870219 | MS.gene06652:intron | 30.0% | |
TCTTTCAGAAATAGTGCATT+CGG | + | chr3.3:76871442-76871461 | None:intergenic | 30.0% | |
TGCACAGAAAACAAAACTAT+TGG | + | chr3.3:76870942-76870961 | None:intergenic | 30.0% | |
TGTAGAATTTGACTCTATTG+GGG | - | chr3.3:76868640-76868659 | MS.gene06652:CDS | 30.0% | |
TGTTGTTATAGAACCAATAC+AGG | + | chr3.3:76871625-76871644 | None:intergenic | 30.0% | |
TTAAAAAATGGGTACCTCAT+AGG | + | chr3.3:76868117-76868136 | None:intergenic | 30.0% | |
TTATTTCACAAGACAAAGCA+AGG | + | chr3.3:76870852-76870871 | None:intergenic | 30.0% | |
TTCTACTATAACCTTTGCTT+AGG | + | chr3.3:76870245-76870264 | None:intergenic | 30.0% | |
TTCTTCATATTCCATTTGCT+TGG | - | chr3.3:76870199-76870218 | MS.gene06652:intron | 30.0% | |
TTCTTCCATCCATCTATTTA+AGG | - | chr3.3:76871377-76871396 | MS.gene06652:intron | 30.0% | |
TTGAAAACTAATACGGAACA+TGG | + | chr3.3:76868445-76868464 | None:intergenic | 30.0% | |
! | AAACAGCATATTTTCACTTC+TGG | + | chr3.3:76872537-76872556 | None:intergenic | 30.0% |
! | AACAGCATATTTTCACTTCT+GGG | + | chr3.3:76872536-76872555 | None:intergenic | 30.0% |
! | ACCTTTTACTCTTTCTAAAC+TGG | + | chr3.3:76871517-76871536 | None:intergenic | 30.0% |
! | ACGCTAGAAATTTTGTCAAA+TGG | + | chr3.3:76871403-76871422 | None:intergenic | 30.0% |
! | ATAGTTTCTTTTGCTGAGAA+GGG | - | chr3.3:76869349-76869368 | MS.gene06652:intron | 30.0% |
! | CAGGGAATTATCTAAGATTA+TGG | - | chr3.3:76872941-76872960 | MS.gene06652:CDS | 30.0% |
! | GATGTGGGTTTTTATATGTT+GGG | + | chr3.3:76870352-76870371 | None:intergenic | 30.0% |
! | GGAATTATCTAAGATTATGG+GGG | - | chr3.3:76872944-76872963 | MS.gene06652:CDS | 30.0% |
! | GGGAATTATCTAAGATTATG+GGG | - | chr3.3:76872943-76872962 | MS.gene06652:CDS | 30.0% |
! | TATATAGCTGGTTTATGCAA+GGG | - | chr3.3:76872357-76872376 | MS.gene06652:intron | 30.0% |
! | TCATCGATGAATATAATGGA+TGG | + | chr3.3:76871938-76871957 | None:intergenic | 30.0% |
! | TTATATAGCTGGTTTATGCA+AGG | - | chr3.3:76872356-76872375 | MS.gene06652:intron | 30.0% |
!! | ATGTGTGGTTATTTCTTTGA+AGG | - | chr3.3:76871657-76871676 | MS.gene06652:intron | 30.0% |
!! | TAGGAATTGGTTTGAATAAG+AGG | + | chr3.3:76868098-76868117 | None:intergenic | 30.0% |
!! | TGCTTGATTTATTTTCGTGT+TGG | + | chr3.3:76869478-76869497 | None:intergenic | 30.0% |
!!! | AGAAAGCATCGACAATTTTA+TGG | + | chr3.3:76869140-76869159 | None:intergenic | 30.0% |
!!! | GATGAAGTAGACAGTTTTTT+GGG | - | chr3.3:76871953-76871972 | MS.gene06652:intron | 30.0% |
!!! | GCATATGATAGTTTTATGCT+TGG | + | chr3.3:76868476-76868495 | None:intergenic | 30.0% |
!!! | TCTAGGGTTCCTATTTTTAT+TGG | - | chr3.3:76871035-76871054 | MS.gene06652:intron | 30.0% |
!!! | TCTCCCTTATTGTTTTTTTC+TGG | - | chr3.3:76871536-76871555 | MS.gene06652:intron | 30.0% |
!!! | TGGAACTGGTTTTTGAAATA+AGG | - | chr3.3:76871471-76871490 | MS.gene06652:intron | 30.0% |
!!! | TGTTCCGTATTAGTTTTCAA+AGG | - | chr3.3:76868445-76868464 | MS.gene06652:intron | 30.0% |
AAAACTGCAGCACTAATTTC+GGG | - | chr3.3:76868272-76868291 | MS.gene06652:intron | 35.0% | |
AAACTTCTTGGACCACAAAA+GGG | - | chr3.3:76868740-76868759 | MS.gene06652:intron | 35.0% | |
AAAGAAACTATGTTGGTCGT+TGG | + | chr3.3:76869340-76869359 | None:intergenic | 35.0% | |
AAAGAGATTGCTAAACGTCT+TGG | - | chr3.3:76868068-76868087 | MS.gene06652:CDS | 35.0% | |
AAATAGATGGATGGAAGAAG+CGG | + | chr3.3:76871376-76871395 | None:intergenic | 35.0% | |
AATATTTGTCTGTTCTGCAG+TGG | - | chr3.3:76871880-76871899 | MS.gene06652:intron | 35.0% | |
ACAAGCATAAATAGGACACA+GGG | + | chr3.3:76869992-76870011 | None:intergenic | 35.0% | |
ACAATAGCCAATCACAAAAG+GGG | + | chr3.3:76871006-76871025 | None:intergenic | 35.0% | |
ACAGTAGATTAGCAAATGTG+TGG | - | chr3.3:76871642-76871661 | MS.gene06652:intron | 35.0% | |
ACATATAAAAACCCACATCC+AGG | - | chr3.3:76870353-76870372 | MS.gene06652:intron | 35.0% | |
ACTGCATAATGAGAAGAAAG+GGG | - | chr3.3:76872443-76872462 | MS.gene06652:intron | 35.0% | |
ACTTAAAAACTTACGATCGG+TGG | + | chr3.3:76872053-76872072 | None:intergenic | 35.0% | |
AGTAAGAAGAGTAGATCAGA+TGG | - | chr3.3:76869631-76869650 | MS.gene06652:intron | 35.0% | |
AGTCAAATTCTACATCGATG+TGG | + | chr3.3:76868634-76868653 | None:intergenic | 35.0% | |
ATAGATGAAGTAGCATGTGA+TGG | + | chr3.3:76870645-76870664 | None:intergenic | 35.0% | |
ATCACCATTAGATGAACAGA+TGG | + | chr3.3:76871263-76871282 | None:intergenic | 35.0% | |
CAATGTTACATGTGACATTC+AGG | - | chr3.3:76870689-76870708 | MS.gene06652:intron | 35.0% | |
CACAATAGCCAATCACAAAA+GGG | + | chr3.3:76871007-76871026 | None:intergenic | 35.0% | |
CATATATACACTCCTCAAGA+AGG | + | chr3.3:76871586-76871605 | None:intergenic | 35.0% | |
CGTGAATCAAGATTGTAAGA+AGG | - | chr3.3:76870560-76870579 | MS.gene06652:intron | 35.0% | |
CTCAGCAAAAGAAACTATGT+TGG | + | chr3.3:76869347-76869366 | None:intergenic | 35.0% | |
GAAAACTGCAGCACTAATTT+CGG | - | chr3.3:76868271-76868290 | MS.gene06652:intron | 35.0% | |
GAATGTCACATGTAACATTG+TGG | + | chr3.3:76870689-76870708 | None:intergenic | 35.0% | |
GATGGATAACAACCTTACAT+TGG | - | chr3.3:76871295-76871314 | MS.gene06652:intron | 35.0% | |
GGAGATAAGTTAGCATAGAA+TGG | + | chr3.3:76868523-76868542 | None:intergenic | 35.0% | |
GTAGAATTTGACTCTATTGG+GGG | - | chr3.3:76868641-76868660 | MS.gene06652:CDS | 35.0% | |
GTCAGGATTTATAACATCAC+AGG | + | chr3.3:76868612-76868631 | None:intergenic | 35.0% | |
GTCTGGATATCCAATTTCAA+AGG | + | chr3.3:76872265-76872284 | None:intergenic | 35.0% | |
TAAAAAAGAGGGTGGAAACT+AGG | - | chr3.3:76869564-76869583 | MS.gene06652:intron | 35.0% | |
TACAAGCATAAATAGGACAC+AGG | + | chr3.3:76869993-76870012 | None:intergenic | 35.0% | |
TATCAAACCTGATGAGCAAA+TGG | - | chr3.3:76868855-76868874 | MS.gene06652:intron | 35.0% | |
TATCCAATTTCAAAGGCTTG+AGG | + | chr3.3:76872258-76872277 | None:intergenic | 35.0% | |
TATGCGAGTGTATAAAAGCT+TGG | - | chr3.3:76869159-76869178 | MS.gene06652:intron | 35.0% | |
TGATCGTGAAAAAGGTTAAC+AGG | + | chr3.3:76870536-76870555 | None:intergenic | 35.0% | |
TGCATAATATATGCAAGGTC+CGG | - | chr3.3:76868972-76868991 | MS.gene06652:CDS | 35.0% | |
TGTACGTTACTGTAGGAATA+TGG | - | chr3.3:76870167-76870186 | MS.gene06652:intron | 35.0% | |
TTATAGAACCAATACAGGAG+TGG | + | chr3.3:76871620-76871639 | None:intergenic | 35.0% | |
TTGAAATTGGATATCCAGAC+CGG | - | chr3.3:76872265-76872284 | MS.gene06652:CDS | 35.0% | |
! | AACACACTTACCAAGCTTTT+GGG | + | chr3.3:76868891-76868910 | None:intergenic | 35.0% |
! | AAGATCAATTTGTGATGACG+TGG | - | chr3.3:76872690-76872709 | MS.gene06652:intron | 35.0% |
! | AAGCTAATTTGCCTTGAGAT+TGG | - | chr3.3:76869875-76869894 | MS.gene06652:intron | 35.0% |
! | AAGCTCATTTTCCCAATGTA+AGG | + | chr3.3:76871310-76871329 | None:intergenic | 35.0% |
! | AATGGCCTTAAATAGATGGA+TGG | + | chr3.3:76871385-76871404 | None:intergenic | 35.0% |
! | ATTGCTTCATCAAGTTCTGA+AGG | + | chr3.3:76872222-76872241 | None:intergenic | 35.0% |
! | CATAGTTTCTTTTGCTGAGA+AGG | - | chr3.3:76869348-76869367 | MS.gene06652:intron | 35.0% |
! | GGATGTGGGTTTTTATATGT+TGG | + | chr3.3:76870353-76870372 | None:intergenic | 35.0% |
! | GTCAAATGGCCTTAAATAGA+TGG | + | chr3.3:76871389-76871408 | None:intergenic | 35.0% |
! | TTTATTAGGGATGAGAGCAT+AGG | - | chr3.3:76868217-76868236 | MS.gene06652:intron | 35.0% |
! | TTTCTGCGTGTTCTTTGTTT+AGG | - | chr3.3:76871848-76871867 | MS.gene06652:intron | 35.0% |
!! | AAATTATGCTAGTCTTAGGC+AGG | + | chr3.3:76868200-76868219 | None:intergenic | 35.0% |
!! | TTGCTTCATCAAGTTCTGAA+GGG | + | chr3.3:76872221-76872240 | None:intergenic | 35.0% |
!!! | AGTTTCCACCCTCTTTTTTA+CGG | + | chr3.3:76869564-76869583 | None:intergenic | 35.0% |
!!! | ATGTGATGGCAGAGATTTTT+TGG | + | chr3.3:76870631-76870650 | None:intergenic | 35.0% |
!!! | CGATGAAGTAGACAGTTTTT+TGG | - | chr3.3:76871952-76871971 | MS.gene06652:intron | 35.0% |
!!! | TGGTTTTATGCAAAAACTCC+AGG | + | chr3.3:76868503-76868522 | None:intergenic | 35.0% |
!!! | TGTGATGGCAGAGATTTTTT+GGG | + | chr3.3:76870630-76870649 | None:intergenic | 35.0% |
!!! | TTTTTTCATATCATGAGCGG+TGG | - | chr3.3:76872728-76872747 | MS.gene06652:intron | 35.0% |
AACCTGATGAGCAAATGGTT+TGG | - | chr3.3:76868860-76868879 | MS.gene06652:intron | 40.0% | |
AACTTCTTGGACCACAAAAG+GGG | - | chr3.3:76868741-76868760 | MS.gene06652:intron | 40.0% | |
AAGAAGAGTAGATCAGATGG+AGG | - | chr3.3:76869634-76869653 | MS.gene06652:intron | 40.0% | |
AAGCATAAATAGGACACAGG+GGG | + | chr3.3:76869990-76870009 | None:intergenic | 40.0% | |
AAGGCCATCTGTTCATCTAA+TGG | - | chr3.3:76871256-76871275 | MS.gene06652:intron | 40.0% | |
AATCACATCCCTAGAGACAA+AGG | - | chr3.3:76869659-76869678 | MS.gene06652:intron | 40.0% | |
AATGGACGTCATATTAGGGT+TGG | - | chr3.3:76871065-76871084 | MS.gene06652:intron | 40.0% | |
AATGGGTACCTCATAGGAAT+TGG | + | chr3.3:76868111-76868130 | None:intergenic | 40.0% | |
AATTCTACATCGATGTGGTC+AGG | + | chr3.3:76868629-76868648 | None:intergenic | 40.0% | |
ACAAGACCTGTTGTTATACG+CGG | - | chr3.3:76867953-76867972 | MS.gene06652:CDS | 40.0% | |
ACATCAAGAACGTCGTTTCA+TGG | - | chr3.3:76872885-76872904 | MS.gene06652:CDS | 40.0% | |
ACCTGATGAGCAAATGGTTT+GGG | - | chr3.3:76868861-76868880 | MS.gene06652:intron | 40.0% | |
AGAGAGGGCTGATATATTGA+AGG | - | chr3.3:76872290-76872309 | MS.gene06652:CDS | 40.0% | |
AGCACTCACCGTAAAAAAGA+GGG | - | chr3.3:76869553-76869572 | MS.gene06652:intron | 40.0% | |
ATATATCAGCCCTCTCTTTC+CGG | + | chr3.3:76872287-76872306 | None:intergenic | 40.0% | |
ATATATTGTGCCTTTGCCAC+TGG | + | chr3.3:76869422-76869441 | None:intergenic | 40.0% | |
ATCTATGCTTGACCACACTA+GGG | - | chr3.3:76870659-76870678 | MS.gene06652:intron | 40.0% | |
CAAACTTCTTGGACCACAAA+AGG | - | chr3.3:76868739-76868758 | MS.gene06652:intron | 40.0% | |
CAAGCATAAATAGGACACAG+GGG | + | chr3.3:76869991-76870010 | None:intergenic | 40.0% | |
CAATAGCCAATCACAAAAGG+GGG | + | chr3.3:76871005-76871024 | None:intergenic | 40.0% | |
CATAATATATGCAAGGTCCG+GGG | - | chr3.3:76868974-76868993 | MS.gene06652:CDS | 40.0% | |
CCACAATAGCCAATCACAAA+AGG | + | chr3.3:76871008-76871027 | None:intergenic | 40.0% | |
GAAACATAGTTAGGTATGCC+AGG | + | chr3.3:76871742-76871761 | None:intergenic | 40.0% | |
GCATAATATATGCAAGGTCC+GGG | - | chr3.3:76868973-76868992 | MS.gene06652:CDS | 40.0% | |
GCTTAAGTGGTACTCATAGT+AGG | - | chr3.3:76869519-76869538 | MS.gene06652:intron | 40.0% | |
GTACTCATAGTAGGAGAGTT+GGG | - | chr3.3:76869528-76869547 | MS.gene06652:intron | 40.0% | |
TACTCATAGTAGGAGAGTTG+GGG | - | chr3.3:76869529-76869548 | MS.gene06652:intron | 40.0% | |
TAGCACTCACCGTAAAAAAG+AGG | - | chr3.3:76869552-76869571 | MS.gene06652:intron | 40.0% | |
TAGTTGCATAGAGCAACACA+AGG | - | chr3.3:76868315-76868334 | MS.gene06652:intron | 40.0% | |
TATATTGTGCCTTTGCCACT+GGG | + | chr3.3:76869421-76869440 | None:intergenic | 40.0% | |
TCAAATACCATTTAGCCCAG+TGG | - | chr3.3:76869403-76869422 | MS.gene06652:intron | 40.0% | |
TCGGGCTGAAAATTGTCAAA+CGG | - | chr3.3:76868246-76868265 | MS.gene06652:intron | 40.0% | |
TCTCTCTCTCTCTCATCTTT+GGG | + | chr3.3:76870501-76870520 | None:intergenic | 40.0% | |
TGGTATCACTTGCAGTTGTA+AGG | - | chr3.3:76869273-76869292 | MS.gene06652:intron | 40.0% | |
TTCTTCGATGATTCACGGTT+CGG | + | chr3.3:76868032-76868051 | None:intergenic | 40.0% | |
TTGCGCTCTTTACTGTATAC+AGG | - | chr3.3:76868577-76868596 | MS.gene06652:CDS | 40.0% | |
TTTGAAGGCTTGAAGCTGTT+CGG | - | chr3.3:76871672-76871691 | MS.gene06652:intron | 40.0% | |
! | AAACTGAGTTCATGGCTCTA+TGG | - | chr3.3:76872017-76872036 | MS.gene06652:intron | 40.0% |
! | AACTGAGTTCATGGCTCTAT+GGG | - | chr3.3:76872018-76872037 | MS.gene06652:intron | 40.0% |
! | AACTGTGGTCAATTTGGGTT+TGG | - | chr3.3:76870296-76870315 | MS.gene06652:intron | 40.0% |
! | AAGCCTTATCACAGTATGTG+GGG | + | chr3.3:76869799-76869818 | None:intergenic | 40.0% |
! | CAACACACTTACCAAGCTTT+TGG | + | chr3.3:76868892-76868911 | None:intergenic | 40.0% |
! | CAAGCCTTATCACAGTATGT+GGG | + | chr3.3:76869800-76869819 | None:intergenic | 40.0% |
! | GAGCGGTTTTCATTAATGTG+AGG | - | chr3.3:76868831-76868850 | MS.gene06652:intron | 40.0% |
! | TATGTTGGGTCTGTTTCTCT+CGG | + | chr3.3:76870338-76870357 | None:intergenic | 40.0% |
! | TTGGTCTTCCTTTGTCTCTA+GGG | + | chr3.3:76869670-76869689 | None:intergenic | 40.0% |
! | TTTGTATGGGACAGAGTGTT+GGG | - | chr3.3:76869442-76869461 | MS.gene06652:intron | 40.0% |
! | TTTTCGCATGGCAAACTTCT+TGG | - | chr3.3:76868728-76868747 | MS.gene06652:intron | 40.0% |
! | TTTTGTATGGGACAGAGTGT+TGG | - | chr3.3:76869441-76869460 | MS.gene06652:intron | 40.0% |
!! | AAAAGCATTTGTCACCTGGT+GGG | - | chr3.3:76870806-76870825 | MS.gene06652:intron | 40.0% |
!! | AAGTTACTGGGTATTGGTCA+CGG | - | chr3.3:76867989-76868008 | MS.gene06652:CDS | 40.0% |
!! | ATGAGAGCATAGGTTGGTTT+CGG | - | chr3.3:76868227-76868246 | MS.gene06652:intron | 40.0% |
!! | ATTGGTCTTCCTTTGTCTCT+AGG | + | chr3.3:76869671-76869690 | None:intergenic | 40.0% |
!! | CATATTAGGGTTGGTTCTAG+TGG | - | chr3.3:76871074-76871093 | MS.gene06652:intron | 40.0% |
!! | CCTTTTGTGATTGGCTATTG+TGG | - | chr3.3:76871005-76871024 | MS.gene06652:intron | 40.0% |
!! | CTTCCTCAAGCCTTTGAAAT+TGG | - | chr3.3:76872252-76872271 | MS.gene06652:CDS | 40.0% |
!! | GCAATGAGTTTGTTGCAGAA+CGG | + | chr3.3:76869942-76869961 | None:intergenic | 40.0% |
!! | GGTGGGATTTTAATAACACC+AGG | - | chr3.3:76870823-76870842 | MS.gene06652:intron | 40.0% |
!! | GGTGTTATTAAAATCCCACC+AGG | + | chr3.3:76870823-76870842 | None:intergenic | 40.0% |
!! | TCAGGTTGAAGCTGTAATCA+GGG | - | chr3.3:76872923-76872942 | MS.gene06652:CDS | 40.0% |
!!! | ATTTTTTTTGGTGGTGGCCA+GGG | + | chr3.3:76869006-76869025 | None:intergenic | 40.0% |
!!! | GGTGATCTGTTGTTTTCAGA+TGG | - | chr3.3:76871277-76871296 | MS.gene06652:intron | 40.0% |
!!! | TATTTTTTTTGGTGGTGGCC+AGG | + | chr3.3:76869007-76869026 | None:intergenic | 40.0% |
!!! | TCCAGCTTTTAGAGCTATGA+GGG | + | chr3.3:76870118-76870137 | None:intergenic | 40.0% |
!!! | TTCCAGCTTTTAGAGCTATG+AGG | + | chr3.3:76870119-76870138 | None:intergenic | 40.0% |
AAAACAAGTCTGGTCGTTGC+AGG | + | chr3.3:76868712-76868731 | None:intergenic | 45.0% | |
AAACAAGTCTGGTCGTTGCA+GGG | + | chr3.3:76868711-76868730 | None:intergenic | 45.0% | |
AAACTATCATATGCGGGACC+TGG | - | chr3.3:76868482-76868501 | MS.gene06652:CDS | 45.0% | |
AAAGCTATTGCCAAGGAGTC+TGG | - | chr3.3:76868809-76868828 | MS.gene06652:intron | 45.0% | |
AACAAATGGAGCCTGGATGT+GGG | + | chr3.3:76870367-76870386 | None:intergenic | 45.0% | |
AAGAACACCAGCACTCGATA+AGG | + | chr3.3:76871175-76871194 | None:intergenic | 45.0% | |
ACTCACCGTAAAAAAGAGGG+TGG | - | chr3.3:76869556-76869575 | MS.gene06652:intron | 45.0% | |
ACTTCTTGGACCACAAAAGG+GGG | - | chr3.3:76868742-76868761 | MS.gene06652:intron | 45.0% | |
AGAACACCAGCACTCGATAA+GGG | + | chr3.3:76871174-76871193 | None:intergenic | 45.0% | |
AGCAGTTAATAAGGGCAACC+TGG | - | chr3.3:76871721-76871740 | MS.gene06652:intron | 45.0% | |
ATATCCAGACCGGAAAGAGA+GGG | - | chr3.3:76872275-76872294 | MS.gene06652:CDS | 45.0% | |
ATGTCTTCCGCGAAGTAGAA+AGG | + | chr3.3:76872836-76872855 | None:intergenic | 45.0% | |
CAAAAGGGGGTTCTGTTGTA+TGG | - | chr3.3:76868755-76868774 | MS.gene06652:intron | 45.0% | |
CAAACTCTCAGTCTGCTTGA+TGG | - | chr3.3:76871231-76871250 | MS.gene06652:intron | 45.0% | |
CACGATCGTGATCGTGAAAA+AGG | + | chr3.3:76870544-76870563 | None:intergenic | 45.0% | |
CATCTATGCTTGACCACACT+AGG | - | chr3.3:76870658-76870677 | MS.gene06652:intron | 45.0% | |
CATTGTGGTTAACCCTAGTG+TGG | + | chr3.3:76870674-76870693 | None:intergenic | 45.0% | |
CCAACTGAGCTAAGCTCAAA+AGG | + | chr3.3:76868943-76868962 | None:intergenic | 45.0% | |
CCACATACTGTGATAAGGCT+TGG | - | chr3.3:76869798-76869817 | MS.gene06652:intron | 45.0% | |
CCTGATGAGCAAATGGTTTG+GGG | - | chr3.3:76868862-76868881 | MS.gene06652:intron | 45.0% | |
CTATTGTGGTCAGGGATCTA+GGG | - | chr3.3:76871019-76871038 | MS.gene06652:intron | 45.0% | |
CTCTCTCTCTCTCTCATCTT+TGG | + | chr3.3:76870502-76870521 | None:intergenic | 45.0% | |
CTTATCACAGTATGTGGGGT+CGG | + | chr3.3:76869795-76869814 | None:intergenic | 45.0% | |
GAACCGTGAATCATCGAAGA+AGG | - | chr3.3:76868031-76868050 | MS.gene06652:CDS | 45.0% | |
GAAGAACAACAAATGGAGCC+TGG | + | chr3.3:76870374-76870393 | None:intergenic | 45.0% | |
GAGCCTTCTTCGATGATTCA+CGG | + | chr3.3:76868037-76868056 | None:intergenic | 45.0% | |
GCTGTGTATGTCCTAAGCAA+AGG | - | chr3.3:76870231-76870250 | MS.gene06652:intron | 45.0% | |
GGTACTCATAGTAGGAGAGT+TGG | - | chr3.3:76869527-76869546 | MS.gene06652:intron | 45.0% | |
GGTTATCTTAAAGGGCGAGA+AGG | - | chr3.3:76872311-76872330 | MS.gene06652:intron | 45.0% | |
GGTTTATGCAAGGGTTACAC+TGG | - | chr3.3:76872366-76872385 | MS.gene06652:intron | 45.0% | |
GTGAGATTCTGTTGTAGCCT+GGG | - | chr3.3:76870414-76870433 | MS.gene06652:intron | 45.0% | |
GTTTCACTCACTGTTACGAG+TGG | - | chr3.3:76869253-76869272 | MS.gene06652:intron | 45.0% | |
TAAAAGGGCAAACACTCCTC+AGG | - | chr3.3:76869912-76869931 | MS.gene06652:intron | 45.0% | |
TCACATCCAAGTAGATGCTC+AGG | - | chr3.3:76872971-76872990 | MS.gene06652:CDS | 45.0% | |
TCGTTGCAAGATCCTTCTTG+AGG | - | chr3.3:76871571-76871590 | MS.gene06652:intron | 45.0% | |
TCTTCGATGATTCACGGTTC+GGG | + | chr3.3:76868031-76868050 | None:intergenic | 45.0% | |
TGAGATTCTGTTGTAGCCTG+GGG | - | chr3.3:76870415-76870434 | MS.gene06652:intron | 45.0% | |
TGTCTTCCGCGAAGTAGAAA+GGG | + | chr3.3:76872835-76872854 | None:intergenic | 45.0% | |
TGTGAGATTCTGTTGTAGCC+TGG | - | chr3.3:76870413-76870432 | MS.gene06652:intron | 45.0% | |
TTCTACTTCGCGGAAGACAT+CGG | - | chr3.3:76872836-76872855 | MS.gene06652:CDS | 45.0% | |
TTGAGCTTAGCTCAGTTGGT+AGG | - | chr3.3:76868944-76868963 | MS.gene06652:CDS | 45.0% | |
TTGCCATGCGAAAACAAGTC+TGG | + | chr3.3:76868722-76868741 | None:intergenic | 45.0% | |
! | CCAAGCCTTATCACAGTATG+TGG | + | chr3.3:76869801-76869820 | None:intergenic | 45.0% |
! | CCTTTTGAGCTTAGCTCAGT+TGG | - | chr3.3:76868940-76868959 | MS.gene06652:CDS | 45.0% |
! | CTCAGTCTGCTTGATGGATA+AGG | - | chr3.3:76871237-76871256 | MS.gene06652:intron | 45.0% |
! | GGTTTGGCTCATTAGCCATT+AGG | - | chr3.3:76870312-76870331 | MS.gene06652:intron | 45.0% |
! | GTGATTGGCTATTGTGGTCA+GGG | - | chr3.3:76871011-76871030 | MS.gene06652:intron | 45.0% |
! | TACAACAGAACCCCCTTTTG+TGG | + | chr3.3:76868755-76868774 | None:intergenic | 45.0% |
! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr3.3:76868945-76868964 | MS.gene06652:CDS | 45.0% |
! | TGTGATTGGCTATTGTGGTC+AGG | - | chr3.3:76871010-76871029 | MS.gene06652:intron | 45.0% |
! | TTAGGGATGAGAGCATAGGT+TGG | - | chr3.3:76868221-76868240 | MS.gene06652:intron | 45.0% |
!! | AGTTACTGGGTATTGGTCAC+GGG | - | chr3.3:76867990-76868009 | MS.gene06652:CDS | 45.0% |
!! | CTCAGGTTGAAGCTGTAATC+AGG | - | chr3.3:76872922-76872941 | MS.gene06652:CDS | 45.0% |
!! | GAAAAGCATTTGTCACCTGG+TGG | - | chr3.3:76870805-76870824 | MS.gene06652:intron | 45.0% |
!! | GCAGAAAAGCATTTGTCACC+TGG | - | chr3.3:76870802-76870821 | MS.gene06652:intron | 45.0% |
!! | GGGAGGTTTTTCAGATACGA+AGG | - | chr3.3:76867926-76867945 | MS.gene06652:CDS | 45.0% |
!! | GTTGTTGTGTAGAGAGTGCT+CGG | - | chr3.3:76872169-76872188 | MS.gene06652:CDS | 45.0% |
!! | TGAGAGCATAGGTTGGTTTC+GGG | - | chr3.3:76868228-76868247 | MS.gene06652:intron | 45.0% |
!! | TTGTTGTGTAGAGAGTGCTC+GGG | - | chr3.3:76872170-76872189 | MS.gene06652:CDS | 45.0% |
!!! | CTTTTAGAGCTATGAGGGCT+AGG | + | chr3.3:76870113-76870132 | None:intergenic | 45.0% |
!!! | GAGGAGTGTTTGCCCTTTTA+AGG | + | chr3.3:76869912-76869931 | None:intergenic | 45.0% |
!!! | GCAGAGATTTTTTGGGTCAC+GGG | + | chr3.3:76870623-76870642 | None:intergenic | 45.0% |
!!! | GGCAGAGATTTTTTGGGTCA+CGG | + | chr3.3:76870624-76870643 | None:intergenic | 45.0% |
!!! | GGCTAGGTTGATTTTGAGGT+GGG | + | chr3.3:76870097-76870116 | None:intergenic | 45.0% |
!!! | TAGGTTGATTTTGAGGTGGG+CGG | + | chr3.3:76870094-76870113 | None:intergenic | 45.0% |
!!! | TGAGGGCTAGGTTGATTTTG+AGG | + | chr3.3:76870101-76870120 | None:intergenic | 45.0% |
!!! | TTTTTGGGTCACGGGTATTG+CGG | + | chr3.3:76870615-76870634 | None:intergenic | 45.0% |
!! | TAATGTAAAAAAAAAAAAAA+AGG | + | chr3.3:76870071-76870090 | None:intergenic | 5.0% |
AAATAGGACACAGGGGGAGA+GGG | + | chr3.3:76869984-76870003 | None:intergenic | 50.0% | |
AACAAGTCTGGTCGTTGCAG+GGG | + | chr3.3:76868710-76868729 | None:intergenic | 50.0% | |
ACCATTTAGCCCAGTGGCAA+AGG | - | chr3.3:76869409-76869428 | MS.gene06652:intron | 50.0% | |
ACCTGTTGTTATACGCGGCT+AGG | - | chr3.3:76867958-76867977 | MS.gene06652:CDS | 50.0% | |
ACCTTTGTCGCAGGCAGATT+TGG | - | chr3.3:76872803-76872822 | MS.gene06652:CDS | 50.0% | |
AGAAGGCCCTTTCTACTTCG+CGG | - | chr3.3:76872826-76872845 | MS.gene06652:CDS | 50.0% | |
AGAGGGTGGAAACTAGGCTT+AGG | - | chr3.3:76869570-76869589 | MS.gene06652:intron | 50.0% | |
AGTGATGGCCACTCCTGTAT+TGG | - | chr3.3:76871609-76871628 | MS.gene06652:intron | 50.0% | |
AGTGGCTGCCGTATTTAGCT+TGG | - | chr3.3:76871898-76871917 | MS.gene06652:intron | 50.0% | |
CAACAAATGGAGCCTGGATG+TGG | + | chr3.3:76870368-76870387 | None:intergenic | 50.0% | |
CAAGACAAAGCAAGGCAACC+TGG | + | chr3.3:76870844-76870863 | None:intergenic | 50.0% | |
CCCCAAACCATTTGCTCATC+AGG | + | chr3.3:76868865-76868884 | None:intergenic | 50.0% | |
CCTGTTGTTATACGCGGCTA+GGG | - | chr3.3:76867959-76867978 | MS.gene06652:CDS | 50.0% | |
CGACCCCACATACTGTGATA+AGG | - | chr3.3:76869793-76869812 | MS.gene06652:intron | 50.0% | |
GAAGCTGTTCGGCTGCATAT+AGG | - | chr3.3:76871683-76871702 | MS.gene06652:intron | 50.0% | |
GAGATTCTGTTGTAGCCTGG+GGG | - | chr3.3:76870416-76870435 | MS.gene06652:intron | 50.0% | |
GATATCCAGACCGGAAAGAG+AGG | - | chr3.3:76872274-76872293 | MS.gene06652:CDS | 50.0% | |
GCAGATCAAGCCCAAGCAAA+TGG | + | chr3.3:76870213-76870232 | None:intergenic | 50.0% | |
GCGTCGTTCATCAGATCATG+AGG | - | chr3.3:76871979-76871998 | MS.gene06652:intron | 50.0% | |
GCTATTGTGGTCAGGGATCT+AGG | - | chr3.3:76871018-76871037 | MS.gene06652:intron | 50.0% | |
GCTCGCAAAAGCTATTGCCA+AGG | - | chr3.3:76868802-76868821 | MS.gene06652:intron | 50.0% | |
GGCGCTAAGTTACTGGGTAT+TGG | - | chr3.3:76867983-76868002 | MS.gene06652:CDS | 50.0% | |
GTTCTGTTGTATGGACCTCC+TGG | - | chr3.3:76868764-76868783 | MS.gene06652:intron | 50.0% | |
TAAATAGGACACAGGGGGAG+AGG | + | chr3.3:76869985-76870004 | None:intergenic | 50.0% | |
TATTGCCAAGGAGTCTGGAG+CGG | - | chr3.3:76868814-76868833 | MS.gene06652:intron | 50.0% | |
TCCAAATCTGCCTGCGACAA+AGG | + | chr3.3:76872807-76872826 | None:intergenic | 50.0% | |
TGAACACCCTTATCGAGTGC+TGG | - | chr3.3:76871165-76871184 | MS.gene06652:intron | 50.0% | |
TTTGGGGATGCCCAAAAGCT+TGG | - | chr3.3:76868878-76868897 | MS.gene06652:CDS | 50.0% | |
! | CTCTCTCCCCCTTTTGTGAT+TGG | - | chr3.3:76870996-76871015 | MS.gene06652:intron | 50.0% |
! | GAGTTCATGGCTCTATGGGA+TGG | - | chr3.3:76872022-76872041 | MS.gene06652:intron | 50.0% |
! | GGCAATAGCTTTTGCGAGCA+TGG | + | chr3.3:76868801-76868820 | None:intergenic | 50.0% |
! | GTCTGTTTCTCTCGGCCTAA+TGG | + | chr3.3:76870330-76870349 | None:intergenic | 50.0% |
!! | CGACCAGACTTGTTTTCGCA+TGG | - | chr3.3:76868716-76868735 | MS.gene06652:CDS | 50.0% |
!! | GCCCTCATAGCTCTAAAAGC+TGG | - | chr3.3:76870114-76870133 | MS.gene06652:intron | 50.0% |
!! | TGTAGAGAGTGCTCGGGTTA+TGG | - | chr3.3:76872176-76872195 | MS.gene06652:CDS | 50.0% |
!!! | GGGCTAGGTTGATTTTGAGG+TGG | + | chr3.3:76870098-76870117 | None:intergenic | 50.0% |
ACGTCGTTTCATGGCGAGTC+AGG | - | chr3.3:76872894-76872913 | MS.gene06652:CDS | 55.0% | |
ACTCACCGGCAGTTAGTGGA+CGG | + | chr3.3:76870589-76870608 | None:intergenic | 55.0% | |
CCAATCTTTGTGCGCGTGAG+GGG | - | chr3.3:76868393-76868412 | MS.gene06652:intron | 55.0% | |
CCCAATCTTTGTGCGCGTGA+GGG | - | chr3.3:76868392-76868411 | MS.gene06652:intron | 55.0% | |
CCCTAGCCGCGTATAACAAC+AGG | + | chr3.3:76867962-76867981 | None:intergenic | 55.0% | |
CCCTCACGCGCACAAAGATT+GGG | + | chr3.3:76868395-76868414 | None:intergenic | 55.0% | |
GAAAACCGCTCCAGACTCCT+TGG | + | chr3.3:76868822-76868841 | None:intergenic | 55.0% | |
GCCTTTGCCACTGGGCTAAA+TGG | + | chr3.3:76869413-76869432 | None:intergenic | 55.0% | |
GGAACCTAGACCTTTGTCGC+AGG | - | chr3.3:76872794-76872813 | MS.gene06652:intron | 55.0% | |
GTCAACTCACCGGCAGTTAG+TGG | + | chr3.3:76870593-76870612 | None:intergenic | 55.0% | |
GTCGCAGGCAGATTTGGAGA+AGG | - | chr3.3:76872809-76872828 | MS.gene06652:CDS | 55.0% | |
GTTGCAGAACGGAAAGCCTG+AGG | + | chr3.3:76869931-76869950 | None:intergenic | 55.0% | |
GTTGTTATACGCGGCTAGGG+CGG | - | chr3.3:76867962-76867981 | MS.gene06652:CDS | 55.0% | |
TAGGGCGGCGCTAAGTTACT+GGG | - | chr3.3:76867977-76867996 | MS.gene06652:CDS | 55.0% | |
TCTGCCTGCGACAAAGGTCT+AGG | + | chr3.3:76872801-76872820 | None:intergenic | 55.0% | |
TGGCGAGTCAGGTGATTCTC+AGG | - | chr3.3:76872905-76872924 | MS.gene06652:CDS | 55.0% | |
TGTATGGACCTCCTGGCACT+GGG | - | chr3.3:76868771-76868790 | MS.gene06652:intron | 55.0% | |
TTCATGCATCTCTCTCCCCC+AGG | + | chr3.3:76870434-76870453 | None:intergenic | 55.0% | |
TTGTATGGACCTCCTGGCAC+TGG | - | chr3.3:76868770-76868789 | MS.gene06652:intron | 55.0% | |
! | AGCATGGTTTTCCCAGTGCC+AGG | + | chr3.3:76868785-76868804 | None:intergenic | 55.0% |
! | ATGGTTTTCCCAGTGCCAGG+AGG | + | chr3.3:76868782-76868801 | None:intergenic | 55.0% |
! | CACGGTTCGGGTCGAGATAA+CGG | + | chr3.3:76868019-76868038 | None:intergenic | 55.0% |
! | GGGTATTGCGGTCAACTCAC+CGG | + | chr3.3:76870603-76870622 | None:intergenic | 55.0% |
CCCCTCACGCGCACAAAGAT+TGG | + | chr3.3:76868396-76868415 | None:intergenic | 60.0% | |
CTAGGGCGGCGCTAAGTTAC+TGG | - | chr3.3:76867976-76867995 | MS.gene06652:CDS | 60.0% | |
GATGTGCGAACAGCTCGCAC+AGG | - | chr3.3:76870469-76870488 | MS.gene06652:intron | 60.0% | |
GCCCAATCTTTGTGCGCGTG+AGG | - | chr3.3:76868391-76868410 | MS.gene06652:intron | 60.0% | |
TCAGCCCTCTCTTTCCGGTC+TGG | + | chr3.3:76872282-76872301 | None:intergenic | 60.0% | |
! | CTCACCGGCAGTTAGTGGAC+GGG | + | chr3.3:76870588-76870607 | None:intergenic | 60.0% |
AAGGTCCGGGGCTCAAACCC+TGG | - | chr3.3:76868986-76869005 | MS.gene06652:CDS | 65.0% | |
GGCACCCGTCCACTAACTGC+CGG | - | chr3.3:76870581-76870600 | MS.gene06652:intron | 65.0% | |
GGTGGCCAGGGTTTGAGCCC+CGG | + | chr3.3:76868994-76869013 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 76867924 | 76872998 | 76867924 | ID=MS.gene06652 |
chr3.3 | mRNA | 76867924 | 76872998 | 76867924 | ID=MS.gene06652.t1;Parent=MS.gene06652 |
chr3.3 | exon | 76872801 | 76872998 | 76872801 | ID=MS.gene06652.t1.exon1;Parent=MS.gene06652.t1 |
chr3.3 | CDS | 76872801 | 76872998 | 76872801 | ID=cds.MS.gene06652.t1;Parent=MS.gene06652.t1 |
chr3.3 | exon | 76872023 | 76872323 | 76872023 | ID=MS.gene06652.t1.exon2;Parent=MS.gene06652.t1 |
chr3.3 | CDS | 76872023 | 76872323 | 76872023 | ID=cds.MS.gene06652.t1;Parent=MS.gene06652.t1 |
chr3.3 | exon | 76868864 | 76869022 | 76868864 | ID=MS.gene06652.t1.exon3;Parent=MS.gene06652.t1 |
chr3.3 | CDS | 76868864 | 76869022 | 76868864 | ID=cds.MS.gene06652.t1;Parent=MS.gene06652.t1 |
chr3.3 | exon | 76868446 | 76868741 | 76868446 | ID=MS.gene06652.t1.exon4;Parent=MS.gene06652.t1 |
chr3.3 | CDS | 76868446 | 76868741 | 76868446 | ID=cds.MS.gene06652.t1;Parent=MS.gene06652.t1 |
chr3.3 | exon | 76867924 | 76868127 | 76867924 | ID=MS.gene06652.t1.exon5;Parent=MS.gene06652.t1 |
chr3.3 | CDS | 76867924 | 76868127 | 76867924 | ID=cds.MS.gene06652.t1;Parent=MS.gene06652.t1 |
Gene Sequence |
Protein sequence |