AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013909

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013909.t1 MTR_7g088140 97.755 490 11 0 1 490 1 490 0.0 970
MS.gene013909.t1 MTR_7g088140 97.973 444 9 0 1 444 1 444 0.0 881
MS.gene013909.t1 MTR_5g088220 53.140 414 143 11 85 489 123 494 1.70e-108 331
MS.gene013909.t1 MTR_4g088010 40.476 252 132 2 79 330 30 263 1.35e-62 208
MS.gene013909.t1 MTR_8g463890 46.988 249 118 4 87 334 33 268 3.12e-62 209
MS.gene013909.t1 MTR_3g116130 40.816 98 58 0 122 219 24 121 3.41e-18 85.1
MS.gene013909.t1 MTR_3g116130 40.816 98 58 0 122 219 24 121 1.85e-17 84.3
MS.gene013909.t1 MTR_7g117495 44.048 84 47 0 122 205 13 96 2.64e-17 82.0
MS.gene013909.t1 MTR_7g117495 44.048 84 47 0 122 205 13 96 2.70e-17 82.0
MS.gene013909.t1 MTR_3g092490 43.529 85 48 0 122 206 21 105 1.42e-16 78.2
MS.gene013909.t1 MTR_3g092490 44.444 81 45 0 122 202 21 101 2.46e-16 79.0
MS.gene013909.t1 MTR_3g092490 44.444 81 45 0 122 202 21 101 2.47e-16 79.0
MS.gene013909.t1 MTR_5g064120 40.964 83 49 0 122 204 11 93 4.44e-16 79.0
MS.gene013909.t1 MTR_4g035310 41.667 84 49 0 122 205 11 94 7.57e-16 78.2
MS.gene013909.t1 MTR_4g035310 41.667 84 49 0 122 205 11 94 7.62e-16 78.2
MS.gene013909.t1 MTR_5g097580 25.362 276 182 11 128 397 7 264 1.58e-15 79.3
MS.gene013909.t1 MTR_5g097580 25.725 276 181 11 128 397 7 264 1.76e-15 79.0
MS.gene013909.t1 MTR_8g024520 42.169 83 48 0 123 205 21 103 1.82e-15 77.0
MS.gene013909.t1 MTR_8g024520 42.169 83 48 0 123 205 21 103 1.87e-15 77.0
MS.gene013909.t1 MTR_2g026180 21.992 241 153 4 128 354 5 224 3.29e-14 75.1
MS.gene013909.t1 MTR_1g073690 23.936 188 138 2 123 306 2 188 9.98e-14 73.6
MS.gene013909.t1 MTR_3g103420 23.404 188 140 2 123 306 6 193 4.85e-13 70.9
MS.gene013909.t1 MTR_3g055990 24.339 189 137 2 128 313 7 192 5.42e-13 71.2
MS.gene013909.t1 MTR_3g055990 25.121 207 113 7 128 313 7 192 5.93e-13 71.2
MS.gene013909.t1 MTR_6g004810 24.757 206 133 4 124 327 42 227 1.04e-12 70.1
MS.gene013909.t1 MTR_5g017280 24.339 189 124 5 127 312 4 176 2.05e-12 69.3
MS.gene013909.t1 MTR_5g017280 24.339 189 124 5 127 312 4 176 2.53e-12 68.6
MS.gene013909.t1 MTR_7g105260 46.269 67 36 0 128 194 33 99 2.90e-12 64.7
MS.gene013909.t1 MTR_4g070190 44.118 68 37 1 119 186 1 67 1.98e-11 62.8
MS.gene013909.t1 MTR_4g070140 43.333 60 34 0 128 187 9 68 6.22e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013909.t1 AT2G41060 53.187 502 168 13 1 489 1 448 2.14e-150 437
MS.gene013909.t1 AT2G41060 53.187 502 168 13 1 489 1 448 2.14e-150 437
MS.gene013909.t1 AT2G41060 53.187 502 168 13 1 489 1 448 2.14e-150 437
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G56860 60.143 419 122 12 78 489 91 471 9.69e-146 426
MS.gene013909.t1 AT3G15010 46.256 227 111 1 87 313 35 250 8.09e-61 205
MS.gene013909.t1 AT3G15010 46.256 227 111 1 87 313 35 250 8.09e-61 205
MS.gene013909.t1 AT2G22090 50.394 127 63 0 80 206 57 183 1.29e-39 146
MS.gene013909.t1 AT2G22090 33.613 119 72 1 199 317 80 191 6.07e-12 67.4
MS.gene013909.t1 AT2G22090 50.394 127 63 0 80 206 57 183 1.61e-39 146
MS.gene013909.t1 AT2G22090 33.613 119 72 1 199 317 80 191 6.29e-12 67.4
MS.gene013909.t1 AT2G19380 47.656 128 67 0 79 206 360 487 2.84e-32 130
MS.gene013909.t1 AT2G22100 46.825 126 67 0 74 199 110 235 4.81e-32 127
MS.gene013909.t1 AT1G20880 43.878 98 53 1 122 219 19 114 8.97e-19 86.7
MS.gene013909.t1 AT1G20880 43.878 98 53 1 122 219 19 114 8.97e-19 86.7
MS.gene013909.t1 AT1G20880 43.878 98 53 1 122 219 19 114 8.97e-19 86.7
MS.gene013909.t1 AT1G76460 43.878 98 53 1 122 219 19 114 1.89e-18 85.9
MS.gene013909.t1 AT1G22330 42.857 91 51 1 122 211 12 102 4.19e-18 85.1
MS.gene013909.t1 AT1G22910 41.935 93 54 0 119 211 5 97 2.30e-17 82.0
MS.gene013909.t1 AT1G22910 43.678 87 49 0 119 205 5 91 2.45e-17 82.0
MS.gene013909.t1 AT1G22910 41.935 93 54 0 119 211 5 97 1.73e-16 81.3
MS.gene013909.t1 AT1G78260 40.964 83 49 0 122 204 12 94 2.46e-16 79.7
MS.gene013909.t1 AT4G36960 25.907 193 123 5 127 319 3 175 6.46e-16 79.7
MS.gene013909.t1 AT4G36960 25.907 193 123 5 127 319 3 175 6.46e-16 79.7
MS.gene013909.t1 AT1G33470 42.169 83 48 0 123 205 3 85 8.35e-16 77.4
MS.gene013909.t1 AT1G78260 40.964 83 49 0 122 204 12 94 8.56e-16 77.8
MS.gene013909.t1 AT1G33470 42.169 83 48 0 123 205 3 85 9.63e-16 77.4
MS.gene013909.t1 AT1G33470 42.045 88 50 1 123 210 3 89 1.02e-15 77.4
MS.gene013909.t1 AT5G53680 42.169 83 48 0 123 205 9 91 1.92e-15 74.7
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 5.75e-15 77.4
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 5.75e-15 77.4
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 5.75e-15 77.4
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 5.75e-15 77.4
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 5.75e-15 77.4
MS.gene013909.t1 AT5G40490 25.698 179 117 2 128 305 43 206 6.00e-15 77.4
MS.gene013909.t1 AT3G07810 24.107 224 153 6 124 339 3 217 6.23e-15 77.4
MS.gene013909.t1 AT1G17640 27.607 163 106 3 128 290 67 217 6.65e-15 76.6
MS.gene013909.t1 AT1G17640 27.607 163 106 3 128 290 67 217 6.65e-15 76.6
MS.gene013909.t1 AT1G17640 27.607 163 106 3 128 290 67 217 6.65e-15 76.6
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 7.53e-15 77.0
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 7.53e-15 77.0
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 7.53e-15 77.0
MS.gene013909.t1 AT5G55550 24.309 181 134 2 128 306 7 186 7.53e-15 77.0
MS.gene013909.t1 AT3G07810 24.107 224 153 6 124 339 3 217 7.68e-15 77.4
MS.gene013909.t1 AT4G26650 25.000 184 132 2 128 306 16 198 1.70e-14 75.9
MS.gene013909.t1 AT4G26650 25.000 184 132 2 128 306 13 195 2.21e-14 75.5
MS.gene013909.t1 AT2G46780 42.169 83 48 0 123 205 18 100 6.48e-14 73.2
MS.gene013909.t1 AT2G46780 42.169 83 48 0 123 205 18 100 6.48e-14 73.2
MS.gene013909.t1 AT3G54770 39.286 84 51 0 122 205 12 95 7.72e-14 72.0
MS.gene013909.t1 AT3G54770 39.286 84 51 0 122 205 12 95 9.01e-14 71.6
MS.gene013909.t1 AT5G47620 21.860 215 161 2 128 342 7 214 9.73e-14 73.6
MS.gene013909.t1 AT5G47620 21.860 215 161 2 128 342 7 214 9.73e-14 73.6
MS.gene013909.t1 AT5G47620 21.860 215 161 2 128 342 7 214 9.73e-14 73.6
MS.gene013909.t1 AT4G14300 23.810 189 135 4 123 306 2 186 4.72e-13 71.2
MS.gene013909.t1 AT4G14300 23.810 189 135 4 123 306 2 186 4.72e-13 71.2
MS.gene013909.t1 AT2G33410 21.978 182 137 3 128 306 7 186 6.20e-13 70.9
MS.gene013909.t1 AT3G06970 36.697 109 66 2 123 229 8 115 1.52e-12 68.9
MS.gene013909.t1 AT1G58470 22.051 195 141 1 123 306 2 196 1.71e-12 69.3
MS.gene013909.t1 AT1G58470 22.051 195 141 1 123 306 2 196 1.71e-12 69.3
MS.gene013909.t1 AT5G11412 37.500 96 59 1 110 205 36 130 2.48e-12 65.9
MS.gene013909.t1 AT5G53720 39.744 78 47 0 128 205 10 87 2.82e-12 63.5
MS.gene013909.t1 AT4G39260 41.667 60 35 0 128 187 7 66 1.58e-11 61.6
MS.gene013909.t1 AT2G21660 39.706 68 40 1 119 186 1 67 1.83e-11 62.8
MS.gene013909.t1 AT4G39260 40.625 64 38 0 128 191 7 70 2.23e-11 61.6
MS.gene013909.t1 AT4G39260 40.625 64 38 0 128 191 7 70 2.83e-11 60.5
MS.gene013909.t1 AT5G59865 53.846 52 24 0 124 175 23 74 4.46e-11 60.5
MS.gene013909.t1 AT1G60650 36.842 76 47 1 128 202 13 88 4.80e-11 64.3
MS.gene013909.t1 AT1G60650 36.842 76 47 1 128 202 13 88 4.80e-11 64.3
MS.gene013909.t1 AT3G23830 36.364 77 48 1 128 203 36 112 5.28e-11 60.8
MS.gene013909.t1 AT3G23830 36.364 77 48 1 128 203 36 112 5.28e-11 60.8
MS.gene013909.t1 AT4G39260 40.625 64 38 0 128 191 7 70 5.54e-11 61.6

Find 174 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGATAATGTTGGATTTAT+TGG 0.118007 7.1:+18028329 MS.gene013909:CDS
GCTGTTACGGATAAGGTTTC+AGG 0.206721 7.1:+18027765 MS.gene013909:CDS
TGCTAGTGCTTCTGCTGCAC+AGG 0.250683 7.1:+18028430 MS.gene013909:CDS
CAGCTTGGACAGGGTGGTTC+TGG 0.259906 7.1:+18028707 MS.gene013909:CDS
TATGGTTCCGGTTCGGGTTC+GGG 0.266714 7.1:-18027384 None:intergenic
TCCCATTACGGTTGGACTTA+TGG 0.269143 7.1:-18028630 None:intergenic
TCAGGGTGCTACGTTGGGGC+TGG 0.270572 7.1:+18028511 MS.gene013909:CDS
GACGGCGTTGCTTGCTTCTC+AGG 0.271562 7.1:+18028493 MS.gene013909:CDS
AAAATCTTTGTTCATGGTTT+GGG 0.280136 7.1:+18027675 MS.gene013909:CDS
GCTTCTCAGGGTGCTACGTT+GGG 0.281924 7.1:+18028506 MS.gene013909:CDS
TGAAAGGTTCTAGAAGCTTC+TGG 0.286546 7.1:-18027551 None:intergenic
GTATGGTTCCGGTTCGGGTT+CGG 0.291038 7.1:-18027385 None:intergenic
GGGATGTATGGTTCCGGTTC+GGG 0.295347 7.1:-18027390 None:intergenic
TCGGGTTCGGGTACCGGTTC+CGG 0.298777 7.1:-18027372 None:intergenic
GCGTGTCAGCTGGCGTCTAT+TGG 0.324761 7.1:+18027885 MS.gene013909:CDS
TAAGGTTTCAGGGAAATCTA+AGG 0.326026 7.1:+18027776 MS.gene013909:CDS
TCCGGTTCGGGTTCGGGTAC+CGG 0.327489 7.1:-18027378 None:intergenic
TTGGGGCTGGGTAATTTATT+GGG 0.330550 7.1:+18028524 MS.gene013909:CDS
TCAGGGAAATCTAAGGGTTA+TGG 0.338138 7.1:+18027783 MS.gene013909:CDS
TAGCCAACCAGGGCACTTAA+TGG 0.339964 7.1:+18028370 MS.gene013909:CDS
TATTCTTCGCCGGGGATGTA+TGG 0.343235 7.1:-18027402 None:intergenic
GTTGGGGCTGGGTAATTTAT+TGG 0.351668 7.1:+18028523 MS.gene013909:CDS
TAGTAATGTTGGAGCTGATT+TGG 0.360095 7.1:+18027995 MS.gene013909:CDS
TCGGGTACCGGTTCCGGTTT+AGG 0.366790 7.1:-18027366 None:intergenic
CCCTGTCCAAGCTGCTGGTT+CGG 0.367353 7.1:-18028698 None:intergenic
AAGATTTATATTAGTAATGT+TGG 0.368173 7.1:+18027984 MS.gene013909:CDS
ACCGGTACCCGAACCCGAAC+CGG 0.368976 7.1:+18027377 MS.gene013909:CDS
GGTGGCGCCGTTGGTGGTGC+CGG 0.370594 7.1:+18027941 MS.gene013909:CDS
GCTAGTGCTTCTGCTGCACA+GGG 0.374971 7.1:+18028431 MS.gene013909:CDS
TTGTAAAGCTGTTACGGATA+AGG 0.376036 7.1:+18027758 MS.gene013909:CDS
GCCGTTGGTGGTGCCGGGTT+CGG 0.376950 7.1:+18027947 MS.gene013909:CDS
GGAAGTAGAGGAGGAGGAAG+AGG 0.377567 7.1:+18027467 MS.gene013909:CDS
GGTGTTCCTGCTGCTGGTCA+TGG 0.378632 7.1:+18028578 MS.gene013909:CDS
TCCGGTGGTTGCAGCGGCGG+TGG 0.380898 7.1:+18027923 MS.gene013909:CDS
GGGGATGTATGGTTCCGGTT+CGG 0.387478 7.1:-18027391 None:intergenic
GTGATGTTGCGGATCGGATT+CGG 0.390034 7.1:+18027622 MS.gene013909:CDS
CCAACCGTAATGGGAGCATA+TGG 0.394272 7.1:+18028638 MS.gene013909:CDS
ACCTCTTCGTATTCTTCGCC+GGG 0.396618 7.1:-18027411 None:intergenic
GGTAATTTATTGGGGAGTCT+TGG 0.397143 7.1:+18028533 MS.gene013909:CDS
TGTACCACAGGCTGGATTGC+AGG 0.397446 7.1:+18028667 MS.gene013909:CDS
ACCATAAGTCCAACCGTAAT+GGG 0.401409 7.1:+18028629 MS.gene013909:CDS
AAGGAGCCGCAGAAGAAGAT+TGG 0.406787 7.1:+18027849 MS.gene013909:CDS
GGTTCTGGAAGAGGGCAATA+TGG 0.407146 7.1:+18028722 MS.gene013909:CDS
ACTCCTGGTGTTCCTGCTGC+TGG 0.407521 7.1:+18028572 MS.gene013909:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.415155 7.1:+18027479 MS.gene013909:CDS
GCCTGATTGTACCCGGCTAC+TGG 0.419681 7.1:-18028404 None:intergenic
TGCTTCTCAGGGTGCTACGT+TGG 0.424012 7.1:+18028505 MS.gene013909:CDS
CCTGCGCTGACTCCTGCACT+TGG 0.433465 7.1:+18028461 MS.gene013909:CDS
ATTCCCATATGCTCCCATTA+CGG 0.434145 7.1:-18028642 None:intergenic
TCTGACTCAATGGATTCAAT+TGG 0.434757 7.1:-18028289 None:intergenic
TGAAGAGGAAGTAGAGGAGG+AGG 0.435088 7.1:+18027461 MS.gene013909:CDS
GAGATTGAGGAAGGGCCGTT+AGG 0.435741 7.1:+18028056 MS.gene013909:CDS
TCGCCGGGGATGTATGGTTC+CGG 0.435872 7.1:-18027396 None:intergenic
TGAGGATTGTAAAGCTGTTA+CGG 0.437274 7.1:+18027752 MS.gene013909:CDS
TTCGAGATTTGGAGAGATTG+AGG 0.437702 7.1:+18028043 MS.gene013909:CDS
ACCGCTCAAACAACATCAAC+CGG 0.438224 7.1:+18027341 MS.gene013909:CDS
CAGGGTGCTACGTTGGGGCT+GGG 0.438849 7.1:+18028512 MS.gene013909:CDS
GAGTGCGAGAAGGGCGTTGG+AGG 0.443617 7.1:+18028139 MS.gene013909:CDS
GTGGCGCCGTTGGTGGTGCC+GGG 0.444273 7.1:+18027942 MS.gene013909:CDS
ACAAACAAACAAAACCCTTT+CGG 0.444701 7.1:-18028101 None:intergenic
TGCAGCGGCGGTGGCGCCGT+TGG 0.446555 7.1:+18027932 MS.gene013909:CDS
AGCGGCGGTGGCGCCGTTGG+TGG 0.447724 7.1:+18027935 MS.gene013909:CDS
CATTGTCAAAAGGCGATAGA+TGG 0.450280 7.1:+18028194 MS.gene013909:CDS
TACCATAAGTCCAACCGTAA+TGG 0.451057 7.1:+18028628 MS.gene013909:CDS
AACTGCGTCCTCTGACTCAA+TGG 0.452172 7.1:-18028299 None:intergenic
ACCGGTTCCGGTTTAGGCTC+CGG 0.452989 7.1:-18027360 None:intergenic
TGGAGCCGCACCTTATCATT+AGG 0.453562 7.1:+18028745 MS.gene013909:CDS
ACGGCGTTGCTTGCTTCTCA+GGG 0.455862 7.1:+18028494 MS.gene013909:CDS
ACATCAACCGGAGCCTAAAC+CGG 0.455977 7.1:+18027353 MS.gene013909:CDS
TTCGCAGTACGGTGAAATTG+AGG 0.458512 7.1:+18027734 MS.gene013909:CDS
CACCGGCAGGACCAGTAGCC+GGG 0.459411 7.1:+18028393 MS.gene013909:CDS
TAGGATGACGGCGTGTCAGC+TGG 0.462425 7.1:+18027875 MS.gene013909:CDS
TTGGATGCACAGAAGCTGTT+TGG 0.465368 7.1:+18028014 MS.gene013909:CDS
ACCAGTAGCCGGGTACAATC+AGG 0.465958 7.1:+18028403 MS.gene013909:CDS
ACCGGAGCCTAAACCGGAAC+CGG 0.466275 7.1:+18027359 MS.gene013909:CDS
TCCGAACCAGCAGCTTGGAC+AGG 0.467127 7.1:+18028697 MS.gene013909:CDS
GCTGACTCCTGCACTTGGAC+AGG 0.467520 7.1:+18028466 MS.gene013909:CDS
TTTCAGAGACATGATAATGT+TGG 0.468367 7.1:+18028320 MS.gene013909:CDS
TGAATACGAAGAAGTTGAAG+AGG 0.469891 7.1:+18027446 MS.gene013909:CDS
AACCTCTTCGTATTCTTCGC+CGG 0.474451 7.1:-18027412 None:intergenic
TGCTGTATCTTCGTCGGCTT+AGG 0.475165 7.1:-18028218 None:intergenic
TGCCCTTCAAACTCCTTATG+AGG 0.475217 7.1:-18028164 None:intergenic
AACCACCCTGTCCAAGCTGC+TGG 0.478162 7.1:-18028703 None:intergenic
GGACAGGGTGGTTCTGGAAG+AGG 0.478332 7.1:+18028713 MS.gene013909:CDS
GCCGGTGCCATTAAGTGCCC+TGG 0.480370 7.1:-18028377 None:intergenic
GGAAGAGGAGGAAGAAGAGG+AGG 0.481424 7.1:+18027482 MS.gene013909:CDS
GAGATCTGTTCTTTCGTGAA+AGG 0.483449 7.1:-18027567 None:intergenic
AGATTGAGGAAGGGCCGTTA+GGG 0.483939 7.1:+18028057 MS.gene013909:CDS
CGCAGAAGAAGATTGGGAAT+AGG 0.485921 7.1:+18027856 MS.gene013909:CDS
AGGAGCCGCAGAAGAAGATT+GGG 0.486295 7.1:+18027850 MS.gene013909:CDS
GCACCGGCAGGACCAGTAGC+CGG 0.489590 7.1:+18028392 MS.gene013909:CDS
CTTTGTTCATGGTTTGGGAT+GGG 0.490151 7.1:+18027680 MS.gene013909:CDS
ACATGTTGCTGCTGCTGCTG+TGG 0.492062 7.1:-18028245 None:intergenic
ACCACCGGAGTTTGCTGCAC+CGG 0.492519 7.1:-18027909 None:intergenic
TGGAGCGAGGAATGCGTTGA+AGG 0.493923 7.1:+18027830 MS.gene013909:CDS
CTGCAACCCACCTAATGATA+AGG 0.494595 7.1:-18028755 None:intergenic
CTGTTACGGATAAGGTTTCA+GGG 0.495047 7.1:+18027766 MS.gene013909:CDS
GAGTGCTGAGAGTGCGAGAA+GGG 0.496400 7.1:+18028130 MS.gene013909:CDS
TCCGAACCCGGCACCACCAA+CGG 0.496535 7.1:-18027948 None:intergenic
GGCGTTGGAGGAGCCTCATA+AGG 0.501894 7.1:+18028151 MS.gene013909:CDS
AACTCCGGTGGTTGCAGCGG+CGG 0.502632 7.1:+18027920 MS.gene013909:CDS
CCAAGTGCAGGAGTCAGCGC+AGG 0.503004 7.1:-18028461 None:intergenic
CTCGAGTCTTCTTTGCGAAG+CGG 0.510082 7.1:+18027587 MS.gene013909:CDS
GCAAGTAGTGCGGTTACTCC+TGG 0.510390 7.1:+18028557 MS.gene013909:CDS
AGTAGAGGAGGAGGAAGAGG+AGG 0.510787 7.1:+18027470 MS.gene013909:CDS
TCTTTGTTCATGGTTTGGGA+TGG 0.520829 7.1:+18027679 MS.gene013909:CDS
GAGCCTCATAAGGAGTTTGA+AGG 0.521276 7.1:+18028161 MS.gene013909:CDS
AGTGTTGCAGTTAGCCAACC+AGG 0.521765 7.1:+18028359 MS.gene013909:CDS
GCCACCGCCGCTGCAACCAC+CGG 0.522847 7.1:-18027924 None:intergenic
TACCCGGCTACTGGTCCTGC+CGG 0.522880 7.1:-18028395 None:intergenic
AGAAGTTGAAGAGGAAGTAG+AGG 0.522907 7.1:+18027455 MS.gene013909:CDS
TTAGGGCTTGATAAGGTGAC+GGG 0.523648 7.1:+18028074 MS.gene013909:CDS
CCATATGCTCCCATTACGGT+TGG 0.527958 7.1:-18028638 None:intergenic
GGGAATGCTGTACCACAGGC+TGG 0.528806 7.1:+18028659 MS.gene013909:CDS
ATATGGGAATGCTGTACCAC+AGG 0.530348 7.1:+18028655 MS.gene013909:CDS
AGATTTGGAGAGATTGAGGA+AGG 0.531982 7.1:+18028047 MS.gene013909:CDS
TTAAGAGAAGGAGTGGAGCG+AGG 0.532777 7.1:+18027817 MS.gene013909:CDS
GTCAGCGCCTGTCCAAGTGC+AGG 0.536502 7.1:-18028473 None:intergenic
AGTTGAAGAGGAAGTAGAGG+AGG 0.538751 7.1:+18027458 MS.gene013909:CDS
TCAGCTGGCGTCTATTGGAC+CGG 0.541287 7.1:+18027890 MS.gene013909:CDS
GGCTGATGCTGTATCTTCGT+CGG 0.547847 7.1:-18028224 None:intergenic
CTTCTCAGGGTGCTACGTTG+GGG 0.551142 7.1:+18028507 MS.gene013909:CDS
CTATATCCGAACCAGCAGCT+TGG 0.552206 7.1:+18028692 MS.gene013909:CDS
GATAATGTTGGATTTATTGG+TGG 0.553110 7.1:+18028332 MS.gene013909:CDS
ACCAGGGCACTTAATGGCAC+CGG 0.554712 7.1:+18028376 MS.gene013909:CDS
AGCATCGTGATGTTGCGGAT+CGG 0.555477 7.1:+18027616 MS.gene013909:CDS
TGCACTTGGACAGGCGCTGA+CGG 0.557391 7.1:+18028475 MS.gene013909:CDS
CAACCGTAATGGGAGCATAT+GGG 0.558624 7.1:+18028639 MS.gene013909:CDS
TGACCAGCAGCAGGAACACC+AGG 0.559224 7.1:-18028575 None:intergenic
ATTACGGTTGGACTTATGGT+AGG 0.559596 7.1:-18028626 None:intergenic
AGGTGACGGGGAAGCCGAAA+GGG 0.560837 7.1:+18028087 MS.gene013909:CDS
GACAGGGTGGTTCTGGAAGA+GGG 0.561765 7.1:+18028714 MS.gene013909:CDS
CCGAACCAGCAGCTTGGACA+GGG 0.561837 7.1:+18028698 MS.gene013909:CDS
TGAACTCCATGACCAGCAGC+AGG 0.562412 7.1:-18028584 None:intergenic
GCAAACTCCGGTGGTTGCAG+CGG 0.562765 7.1:+18027917 MS.gene013909:CDS
TGGGGCTGGGTAATTTATTG+GGG 0.570569 7.1:+18028525 MS.gene013909:CDS
GGGCACTTAATGGCACCGGC+AGG 0.570589 7.1:+18028380 MS.gene013909:CDS
TGAGAGTGCGAGAAGGGCGT+TGG 0.571048 7.1:+18028136 MS.gene013909:CDS
AAGGTTTCAGGGAAATCTAA+GGG 0.574831 7.1:+18027777 MS.gene013909:CDS
AGGGCCGTTAGGGCTTGATA+AGG 0.575128 7.1:+18028067 MS.gene013909:CDS
CGGATTCGGAAGATTGCTGA+TGG 0.577731 7.1:+18027636 MS.gene013909:CDS
TTCGAAGCATCGTGATGTTG+CGG 0.584207 7.1:+18027611 MS.gene013909:CDS
CTATTCCCAATCTTCTTCTG+CGG 0.584260 7.1:-18027855 None:intergenic
AAGGTGACGGGGAAGCCGAA+AGG 0.589222 7.1:+18028086 MS.gene013909:CDS
TGGACCGGTGCAGCAAACTC+CGG 0.593968 7.1:+18027905 MS.gene013909:CDS
TCCGGTTGATGTTGTTTGAG+CGG 0.597080 7.1:-18027342 None:intergenic
AATTGAATCCATTGAGTCAG+AGG 0.601117 7.1:+18028291 MS.gene013909:CDS
GTGCCATTAAGTGCCCTGGT+TGG 0.602768 7.1:-18028373 None:intergenic
GTCACCTTATCAAGCCCTAA+CGG 0.606914 7.1:-18028071 None:intergenic
GGTTCTAGAAGCTTCTGGAT+CGG 0.609830 7.1:-18027546 None:intergenic
GAACCGGAACCATACATCCC+CGG 0.613066 7.1:+18027393 MS.gene013909:CDS
AGAGTGCTGAGAGTGCGAGA+AGG 0.617840 7.1:+18028129 MS.gene013909:CDS
TCTGGAAGAGGGCAATATGG+TGG 0.618817 7.1:+18028725 MS.gene013909:CDS
AGCCTCATAAGGAGTTTGAA+GGG 0.619966 7.1:+18028162 MS.gene013909:CDS
GTTAGGGCTTGATAAGGTGA+CGG 0.622365 7.1:+18028073 MS.gene013909:CDS
GAAGATTGGGAATAGGATGA+CGG 0.630207 7.1:+18027863 MS.gene013909:CDS
GATTTGGAGAGATTGAGGAA+GGG 0.631574 7.1:+18028048 MS.gene013909:CDS
CAAGTGCAGGAGTCAGCGCA+GGG 0.639276 7.1:-18028460 None:intergenic
CTAGTGCTTCTGCTGCACAG+GGG 0.639520 7.1:+18028432 MS.gene013909:CDS
ACCGGTGCAGCAAACTCCGG+TGG 0.641008 7.1:+18027908 MS.gene013909:CDS
AGCAGCCGCCTGATTGTACC+CGG 0.651045 7.1:-18028411 None:intergenic
GGTTGATGTTGTTTGAGCGG+TGG 0.655449 7.1:-18027339 None:intergenic
AACCAGCAGCTTGGACAGGG+TGG 0.658678 7.1:+18028701 MS.gene013909:CDS
CTCTGCGTATACTCCGAACC+CGG 0.663773 7.1:-18027960 None:intergenic
ACCCACCTAATGATAAGGTG+CGG 0.671031 7.1:-18028750 None:intergenic
AGTAGCCGGGTACAATCAGG+CGG 0.672302 7.1:+18028406 MS.gene013909:CDS
AGCACCTGCAATCCAGCCTG+TGG 0.672524 7.1:-18028671 None:intergenic
GTGTTGCAGTTAGCCAACCA+GGG 0.679785 7.1:+18028360 MS.gene013909:CDS
CCTCTTCGTATTCTTCGCCG+GGG 0.698350 7.1:-18027410 None:intergenic
GAGTCTTGGAGCAAGTAGTG+CGG 0.701572 7.1:+18028547 MS.gene013909:CDS
GCTGGTCATGGAGTTCAGAG+TGG 0.717482 7.1:+18028590 MS.gene013909:CDS
CCCCGGCGAAGAATACGAAG+AGG 0.718090 7.1:+18027410 MS.gene013909:CDS
TAGGGCTTGATAAGGTGACG+GGG 0.738245 7.1:+18028075 MS.gene013909:CDS
CGGGTTCGGAGTATACGCAG+AGG 0.748307 7.1:+18027961 MS.gene013909:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATTTATATTAGTAATGT+TGG + chr7.1:18027984-18028003 MS.gene013909:CDS 15.0%
!!! ATGAACAAAGATTTTTCTAT+GGG - chr7.1:18027670-18027689 None:intergenic 20.0%
!!! GATTTATTTTGTTTAAGAGA+AGG + chr7.1:18027805-18027824 MS.gene013909:CDS 20.0%
! AAAAATCTTTGTTCATGGTT+TGG + chr7.1:18027674-18027693 MS.gene013909:CDS 25.0%
! AAAATCTTTGTTCATGGTTT+GGG + chr7.1:18027675-18027694 MS.gene013909:CDS 25.0%
! CATAGAAAAATCTTTGTTCA+TGG + chr7.1:18027669-18027688 MS.gene013909:CDS 25.0%
!! CATGAACAAAGATTTTTCTA+TGG - chr7.1:18027671-18027690 None:intergenic 25.0%
!! CATGATAATGTTGGATTTAT+TGG + chr7.1:18028329-18028348 MS.gene013909:CDS 25.0%
!!! TTTGGTTTTTTTTCGAGATT+TGG + chr7.1:18028032-18028051 MS.gene013909:CDS 25.0%
ACAAACAAACAAAACCCTTT+CGG - chr7.1:18028104-18028123 None:intergenic 30.0%
GATAATGTTGGATTTATTGG+TGG + chr7.1:18028332-18028351 MS.gene013909:CDS 30.0%
! GCATATTTTGCATTGTCAAA+AGG + chr7.1:18028184-18028203 MS.gene013909:CDS 30.0%
! TTTCAGAGACATGATAATGT+TGG + chr7.1:18028320-18028339 MS.gene013909:CDS 30.0%
!! ATTTTGTTTAAGAGAAGGAG+TGG + chr7.1:18027810-18027829 MS.gene013909:CDS 30.0%
AAGGTTTCAGGGAAATCTAA+GGG + chr7.1:18027777-18027796 MS.gene013909:CDS 35.0%
AATTGAATCCATTGAGTCAG+AGG + chr7.1:18028291-18028310 MS.gene013909:CDS 35.0%
TAAGGTTTCAGGGAAATCTA+AGG + chr7.1:18027776-18027795 MS.gene013909:CDS 35.0%
TAGTAATGTTGGAGCTGATT+TGG + chr7.1:18027995-18028014 MS.gene013909:CDS 35.0%
TGAATACGAAGAAGTTGAAG+AGG + chr7.1:18027446-18027465 MS.gene013909:CDS 35.0%
TGAGGATTGTAAAGCTGTTA+CGG + chr7.1:18027752-18027771 MS.gene013909:CDS 35.0%
TTGTAAAGCTGTTACGGATA+AGG + chr7.1:18027758-18027777 MS.gene013909:CDS 35.0%
! TCTGACTCAATGGATTCAAT+TGG - chr7.1:18028292-18028311 None:intergenic 35.0%
ACCATAAGTCCAACCGTAAT+GGG + chr7.1:18028629-18028648 MS.gene013909:CDS 40.0%
AGAAGTTGAAGAGGAAGTAG+AGG + chr7.1:18027455-18027474 MS.gene013909:CDS 40.0%
AGATTTGGAGAGATTGAGGA+AGG + chr7.1:18028047-18028066 MS.gene013909:CDS 40.0%
AGCCTCATAAGGAGTTTGAA+GGG + chr7.1:18028162-18028181 MS.gene013909:CDS 40.0%
ATTACGGTTGGACTTATGGT+AGG - chr7.1:18028629-18028648 None:intergenic 40.0%
ATTCCCATATGCTCCCATTA+CGG - chr7.1:18028645-18028664 None:intergenic 40.0%
CATTGTCAAAAGGCGATAGA+TGG + chr7.1:18028194-18028213 MS.gene013909:CDS 40.0%
CTATTCCCAATCTTCTTCTG+CGG - chr7.1:18027858-18027877 None:intergenic 40.0%
CTGTTACGGATAAGGTTTCA+GGG + chr7.1:18027766-18027785 MS.gene013909:CDS 40.0%
GAAGATTGGGAATAGGATGA+CGG + chr7.1:18027863-18027882 MS.gene013909:CDS 40.0%
GAGATCTGTTCTTTCGTGAA+AGG - chr7.1:18027570-18027589 None:intergenic 40.0%
GATTTGGAGAGATTGAGGAA+GGG + chr7.1:18028048-18028067 MS.gene013909:CDS 40.0%
GGTAATTTATTGGGGAGTCT+TGG + chr7.1:18028533-18028552 MS.gene013909:CDS 40.0%
TACCATAAGTCCAACCGTAA+TGG + chr7.1:18028628-18028647 MS.gene013909:CDS 40.0%
TCAGGGAAATCTAAGGGTTA+TGG + chr7.1:18027783-18027802 MS.gene013909:CDS 40.0%
TTCGAGATTTGGAGAGATTG+AGG + chr7.1:18028043-18028062 MS.gene013909:CDS 40.0%
TTGGGGCTGGGTAATTTATT+GGG + chr7.1:18028524-18028543 MS.gene013909:CDS 40.0%
! ATTAACGCGTTTTCGCAGTA+CGG + chr7.1:18027723-18027742 MS.gene013909:CDS 40.0%
! CTTTGTTCATGGTTTGGGAT+GGG + chr7.1:18027680-18027699 MS.gene013909:CDS 40.0%
! TCTTTGTTCATGGTTTGGGA+TGG + chr7.1:18027679-18027698 MS.gene013909:CDS 40.0%
!! TGAAAGGTTCTAGAAGCTTC+TGG - chr7.1:18027554-18027573 None:intergenic 40.0%
AACCTCTTCGTATTCTTCGC+CGG - chr7.1:18027415-18027434 None:intergenic 45.0%
ACCGCTCAAACAACATCAAC+CGG + chr7.1:18027341-18027360 MS.gene013909:CDS 45.0%
AGTTGAAGAGGAAGTAGAGG+AGG + chr7.1:18027458-18027477 MS.gene013909:CDS 45.0%
ATATGGGAATGCTGTACCAC+AGG + chr7.1:18028655-18028674 MS.gene013909:CDS 45.0%
CGCAGAAGAAGATTGGGAAT+AGG + chr7.1:18027856-18027875 MS.gene013909:CDS 45.0%
GAGCCTCATAAGGAGTTTGA+AGG + chr7.1:18028161-18028180 MS.gene013909:CDS 45.0%
GCTGTTACGGATAAGGTTTC+AGG + chr7.1:18027765-18027784 MS.gene013909:CDS 45.0%
GTCACCTTATCAAGCCCTAA+CGG - chr7.1:18028074-18028093 None:intergenic 45.0%
GTTAGGGCTTGATAAGGTGA+CGG + chr7.1:18028073-18028092 MS.gene013909:CDS 45.0%
GTTGGGGCTGGGTAATTTAT+TGG + chr7.1:18028523-18028542 MS.gene013909:CDS 45.0%
TCCCATTACGGTTGGACTTA+TGG - chr7.1:18028633-18028652 None:intergenic 45.0%
TGCCCTTCAAACTCCTTATG+AGG - chr7.1:18028167-18028186 None:intergenic 45.0%
TGGGGCTGGGTAATTTATTG+GGG + chr7.1:18028525-18028544 MS.gene013909:CDS 45.0%
TTAGGGCTTGATAAGGTGAC+GGG + chr7.1:18028074-18028093 MS.gene013909:CDS 45.0%
TTCGCAGTACGGTGAAATTG+AGG + chr7.1:18027734-18027753 MS.gene013909:CDS 45.0%
TTGGATGCACAGAAGCTGTT+TGG + chr7.1:18028014-18028033 MS.gene013909:CDS 45.0%
! CAACCGTAATGGGAGCATAT+GGG + chr7.1:18028639-18028658 MS.gene013909:CDS 45.0%
! TCCGGTTGATGTTGTTTGAG+CGG - chr7.1:18027345-18027364 None:intergenic 45.0%
!! GGTTCTAGAAGCTTCTGGAT+CGG - chr7.1:18027549-18027568 None:intergenic 45.0%
!! TTCGAAGCATCGTGATGTTG+CGG + chr7.1:18027611-18027630 MS.gene013909:CDS 45.0%
AACTGCGTCCTCTGACTCAA+TGG - chr7.1:18028302-18028321 None:intergenic 50.0%
AAGGAGCCGCAGAAGAAGAT+TGG + chr7.1:18027849-18027868 MS.gene013909:CDS 50.0%
ACATCAACCGGAGCCTAAAC+CGG + chr7.1:18027353-18027372 MS.gene013909:CDS 50.0%
ACCTCTTCGTATTCTTCGCC+GGG - chr7.1:18027414-18027433 None:intergenic 50.0%
AGATTGAGGAAGGGCCGTTA+GGG + chr7.1:18028057-18028076 MS.gene013909:CDS 50.0%
AGCATCGTGATGTTGCGGAT+CGG + chr7.1:18027616-18027635 MS.gene013909:CDS 50.0%
AGGAGCCGCAGAAGAAGATT+GGG + chr7.1:18027850-18027869 MS.gene013909:CDS 50.0%
AGTGTTGCAGTTAGCCAACC+AGG + chr7.1:18028359-18028378 MS.gene013909:CDS 50.0%
CCATATGCTCCCATTACGGT+TGG - chr7.1:18028641-18028660 None:intergenic 50.0%
CGGATTCGGAAGATTGCTGA+TGG + chr7.1:18027636-18027655 MS.gene013909:CDS 50.0%
CTATATCCGAACCAGCAGCT+TGG + chr7.1:18028692-18028711 MS.gene013909:CDS 50.0%
CTCGAGTCTTCTTTGCGAAG+CGG + chr7.1:18027587-18027606 MS.gene013909:CDS 50.0%
GAGTCTTGGAGCAAGTAGTG+CGG + chr7.1:18028547-18028566 MS.gene013909:CDS 50.0%
GGCTGATGCTGTATCTTCGT+CGG - chr7.1:18028227-18028246 None:intergenic 50.0%
GTGATGTTGCGGATCGGATT+CGG + chr7.1:18027622-18027641 MS.gene013909:CDS 50.0%
GTGTTGCAGTTAGCCAACCA+GGG + chr7.1:18028360-18028379 MS.gene013909:CDS 50.0%
TAGGGCTTGATAAGGTGACG+GGG + chr7.1:18028075-18028094 MS.gene013909:CDS 50.0%
TATTCTTCGCCGGGGATGTA+TGG - chr7.1:18027405-18027424 None:intergenic 50.0%
TCTGGAAGAGGGCAATATGG+TGG + chr7.1:18028725-18028744 MS.gene013909:CDS 50.0%
TGAAGAGGAAGTAGAGGAGG+AGG + chr7.1:18027461-18027480 MS.gene013909:CDS 50.0%
TTAAGAGAAGGAGTGGAGCG+AGG + chr7.1:18027817-18027836 MS.gene013909:CDS 50.0%
! CCAACCGTAATGGGAGCATA+TGG + chr7.1:18028638-18028657 MS.gene013909:CDS 50.0%
! GGTTGATGTTGTTTGAGCGG+TGG - chr7.1:18027342-18027361 None:intergenic 50.0%
! TAGCCAACCAGGGCACTTAA+TGG + chr7.1:18028370-18028389 MS.gene013909:CDS 50.0%
!! GGTTCTGGAAGAGGGCAATA+TGG + chr7.1:18028722-18028741 MS.gene013909:CDS 50.0%
!! TGCTGTATCTTCGTCGGCTT+AGG - chr7.1:18028221-18028240 None:intergenic 50.0%
ACATGTTGCTGCTGCTGCTG+TGG - chr7.1:18028248-18028267 None:intergenic 55.0%
ACCAGTAGCCGGGTACAATC+AGG + chr7.1:18028403-18028422 MS.gene013909:CDS 55.0%
ACGGCGTTGCTTGCTTCTCA+GGG + chr7.1:18028494-18028513 MS.gene013909:CDS 55.0%
AGGGCCGTTAGGGCTTGATA+AGG + chr7.1:18028067-18028086 MS.gene013909:CDS 55.0%
AGTAGAGGAGGAGGAAGAGG+AGG + chr7.1:18027470-18027489 MS.gene013909:CDS 55.0%
AGTAGCCGGGTACAATCAGG+CGG + chr7.1:18028406-18028425 MS.gene013909:CDS 55.0%
CCTCTTCGTATTCTTCGCCG+GGG - chr7.1:18027413-18027432 None:intergenic 55.0%
CTAGTGCTTCTGCTGCACAG+GGG + chr7.1:18028432-18028451 MS.gene013909:CDS 55.0%
CTCTGCGTATACTCCGAACC+CGG - chr7.1:18027963-18027982 None:intergenic 55.0%
GAACCGGAACCATACATCCC+CGG + chr7.1:18027393-18027412 MS.gene013909:CDS 55.0%
GAGATTGAGGAAGGGCCGTT+AGG + chr7.1:18028056-18028075 MS.gene013909:CDS 55.0%
GCAAGTAGTGCGGTTACTCC+TGG + chr7.1:18028557-18028576 MS.gene013909:CDS 55.0%
GCTAGTGCTTCTGCTGCACA+GGG + chr7.1:18028431-18028450 MS.gene013909:CDS 55.0%
GCTGGTCATGGAGTTCAGAG+TGG + chr7.1:18028590-18028609 MS.gene013909:CDS 55.0%
GGAAGAGGAGGAAGAAGAGG+AGG + chr7.1:18027482-18027501 MS.gene013909:CDS 55.0%
GGAAGTAGAGGAGGAGGAAG+AGG + chr7.1:18027467-18027486 MS.gene013909:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG + chr7.1:18027479-18027498 MS.gene013909:CDS 55.0%
GGGATGTATGGTTCCGGTTC+GGG - chr7.1:18027393-18027412 None:intergenic 55.0%
GGGGATGTATGGTTCCGGTT+CGG - chr7.1:18027394-18027413 None:intergenic 55.0%
TCAGCTGGCGTCTATTGGAC+CGG + chr7.1:18027890-18027909 MS.gene013909:CDS 55.0%
TGAACTCCATGACCAGCAGC+AGG - chr7.1:18028587-18028606 None:intergenic 55.0%
TGCTAGTGCTTCTGCTGCAC+AGG + chr7.1:18028430-18028449 MS.gene013909:CDS 55.0%
TGGAGCGAGGAATGCGTTGA+AGG + chr7.1:18027830-18027849 MS.gene013909:CDS 55.0%
TGTACCACAGGCTGGATTGC+AGG + chr7.1:18028667-18028686 MS.gene013909:CDS 55.0%
! ACCAGGGCACTTAATGGCAC+CGG + chr7.1:18028376-18028395 MS.gene013909:CDS 55.0%
! CTTCTCAGGGTGCTACGTTG+GGG + chr7.1:18028507-18028526 MS.gene013909:CDS 55.0%
! GCTTCTCAGGGTGCTACGTT+GGG + chr7.1:18028506-18028525 MS.gene013909:CDS 55.0%
! GTGCCATTAAGTGCCCTGGT+TGG - chr7.1:18028376-18028395 None:intergenic 55.0%
! TGCTTCTCAGGGTGCTACGT+TGG + chr7.1:18028505-18028524 MS.gene013909:CDS 55.0%
!! AGAGTGCTGAGAGTGCGAGA+AGG + chr7.1:18028129-18028148 MS.gene013909:CDS 55.0%
!! GACAGGGTGGTTCTGGAAGA+GGG + chr7.1:18028714-18028733 MS.gene013909:CDS 55.0%
!! GAGTGCTGAGAGTGCGAGAA+GGG + chr7.1:18028130-18028149 MS.gene013909:CDS 55.0%
!! GTATGGTTCCGGTTCGGGTT+CGG - chr7.1:18027388-18027407 None:intergenic 55.0%
!! TATGGTTCCGGTTCGGGTTC+GGG - chr7.1:18027387-18027406 None:intergenic 55.0%
AACCACCCTGTCCAAGCTGC+TGG - chr7.1:18028706-18028725 None:intergenic 60.0%
AACCAGCAGCTTGGACAGGG+TGG + chr7.1:18028701-18028720 MS.gene013909:CDS 60.0%
ACCGGAGCCTAAACCGGAAC+CGG + chr7.1:18027359-18027378 MS.gene013909:CDS 60.0%
ACTCCTGGTGTTCCTGCTGC+TGG + chr7.1:18028572-18028591 MS.gene013909:CDS 60.0%
AGCACCTGCAATCCAGCCTG+TGG - chr7.1:18028674-18028693 None:intergenic 60.0%
AGCAGCCGCCTGATTGTACC+CGG - chr7.1:18028414-18028433 None:intergenic 60.0%
CAAGTGCAGGAGTCAGCGCA+GGG - chr7.1:18028463-18028482 None:intergenic 60.0%
CAGCTTGGACAGGGTGGTTC+TGG + chr7.1:18028707-18028726 MS.gene013909:CDS 60.0%
CCCCGGCGAAGAATACGAAG+AGG + chr7.1:18027410-18027429 MS.gene013909:CDS 60.0%
CCGAACCAGCAGCTTGGACA+GGG + chr7.1:18028698-18028717 MS.gene013909:CDS 60.0%
CGGGTTCGGAGTATACGCAG+AGG + chr7.1:18027961-18027980 MS.gene013909:CDS 60.0%
GACGGCGTTGCTTGCTTCTC+AGG + chr7.1:18028493-18028512 MS.gene013909:CDS 60.0%
GCAAACTCCGGTGGTTGCAG+CGG + chr7.1:18027917-18027936 MS.gene013909:CDS 60.0%
GCCTGATTGTACCCGGCTAC+TGG - chr7.1:18028407-18028426 None:intergenic 60.0%
GCGTGTCAGCTGGCGTCTAT+TGG + chr7.1:18027885-18027904 MS.gene013909:CDS 60.0%
GGGAATGCTGTACCACAGGC+TGG + chr7.1:18028659-18028678 MS.gene013909:CDS 60.0%
GGTGTTCCTGCTGCTGGTCA+TGG + chr7.1:18028578-18028597 MS.gene013909:CDS 60.0%
TCCGAACCAGCAGCTTGGAC+AGG + chr7.1:18028697-18028716 MS.gene013909:CDS 60.0%
TCGCCGGGGATGTATGGTTC+CGG - chr7.1:18027399-18027418 None:intergenic 60.0%
TGACCAGCAGCAGGAACACC+AGG - chr7.1:18028578-18028597 None:intergenic 60.0%
TGGACCGGTGCAGCAAACTC+CGG + chr7.1:18027905-18027924 MS.gene013909:CDS 60.0%
! ACCGGTTCCGGTTTAGGCTC+CGG - chr7.1:18027363-18027382 None:intergenic 60.0%
! CCCTGTCCAAGCTGCTGGTT+CGG - chr7.1:18028701-18028720 None:intergenic 60.0%
! GCTGACTCCTGCACTTGGAC+AGG + chr7.1:18028466-18028485 MS.gene013909:CDS 60.0%
! GGCGTTGGAGGAGCCTCATA+AGG + chr7.1:18028151-18028170 MS.gene013909:CDS 60.0%
! TAGGATGACGGCGTGTCAGC+TGG + chr7.1:18027875-18027894 MS.gene013909:CDS 60.0%
! TGAGAGTGCGAGAAGGGCGT+TGG + chr7.1:18028136-18028155 MS.gene013909:CDS 60.0%
!! AAGGTGACGGGGAAGCCGAA+AGG + chr7.1:18028086-18028105 MS.gene013909:CDS 60.0%
!! ACCACCGGAGTTTGCTGCAC+CGG - chr7.1:18027912-18027931 None:intergenic 60.0%
!! AGGTGACGGGGAAGCCGAAA+GGG + chr7.1:18028087-18028106 MS.gene013909:CDS 60.0%
!! GGACAGGGTGGTTCTGGAAG+AGG + chr7.1:18028713-18028732 MS.gene013909:CDS 60.0%
!! TCGGGTACCGGTTCCGGTTT+AGG - chr7.1:18027369-18027388 None:intergenic 60.0%
!! TGCACTTGGACAGGCGCTGA+CGG + chr7.1:18028475-18028494 MS.gene013909:CDS 60.0%
AACTCCGGTGGTTGCAGCGG+CGG + chr7.1:18027920-18027939 MS.gene013909:CDS 65.0%
ACCGGTACCCGAACCCGAAC+CGG + chr7.1:18027377-18027396 MS.gene013909:CDS 65.0%
ACCGGTGCAGCAAACTCCGG+TGG + chr7.1:18027908-18027927 MS.gene013909:CDS 65.0%
CCAAGTGCAGGAGTCAGCGC+AGG - chr7.1:18028464-18028483 None:intergenic 65.0%
GTCAGCGCCTGTCCAAGTGC+AGG - chr7.1:18028476-18028495 None:intergenic 65.0%
TACCCGGCTACTGGTCCTGC+CGG - chr7.1:18028398-18028417 None:intergenic 65.0%
TCCGAACCCGGCACCACCAA+CGG - chr7.1:18027951-18027970 None:intergenic 65.0%
! CAGGGTGCTACGTTGGGGCT+GGG + chr7.1:18028512-18028531 MS.gene013909:CDS 65.0%
! TCAGGGTGCTACGTTGGGGC+TGG + chr7.1:18028511-18028530 MS.gene013909:CDS 65.0%
!! CCTGCGCTGACTCCTGCACT+TGG + chr7.1:18028461-18028480 MS.gene013909:CDS 65.0%
!! GAGTGCGAGAAGGGCGTTGG+AGG + chr7.1:18028139-18028158 MS.gene013909:CDS 65.0%
!! GCCGGTGCCATTAAGTGCCC+TGG - chr7.1:18028380-18028399 None:intergenic 65.0%
!! GGGCACTTAATGGCACCGGC+AGG + chr7.1:18028380-18028399 MS.gene013909:CDS 65.0%
!! TCCGGTTCGGGTTCGGGTAC+CGG - chr7.1:18027381-18027400 None:intergenic 65.0%
!! TCGGGTTCGGGTACCGGTTC+CGG - chr7.1:18027375-18027394 None:intergenic 65.0%
CACCGGCAGGACCAGTAGCC+GGG + chr7.1:18028393-18028412 MS.gene013909:CDS 70.0%
! GCACCGGCAGGACCAGTAGC+CGG + chr7.1:18028392-18028411 MS.gene013909:CDS 70.0%
!! GCCGTTGGTGGTGCCGGGTT+CGG + chr7.1:18027947-18027966 MS.gene013909:CDS 70.0%
GCCACCGCCGCTGCAACCAC+CGG - chr7.1:18027927-18027946 None:intergenic 75.0%
TCCGGTGGTTGCAGCGGCGG+TGG + chr7.1:18027923-18027942 MS.gene013909:CDS 75.0%
!! GGTGGCGCCGTTGGTGGTGC+CGG + chr7.1:18027941-18027960 MS.gene013909:CDS 75.0%
!! GTGGCGCCGTTGGTGGTGCC+GGG + chr7.1:18027942-18027961 MS.gene013909:CDS 75.0%
! AGCGGCGGTGGCGCCGTTGG+TGG + chr7.1:18027935-18027954 MS.gene013909:CDS 80.0%
! TGCAGCGGCGGTGGCGCCGT+TGG + chr7.1:18027932-18027951 MS.gene013909:CDS 80.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 18027294 18028766 18027294 ID=MS.gene013909
chr7.1 mRNA 18027294 18028766 18027294 ID=MS.gene013909.t1;Parent=MS.gene013909
chr7.1 exon 18027294 18028766 18027294 ID=MS.gene013909.t1.exon1;Parent=MS.gene013909.t1
chr7.1 CDS 18027294 18028766 18027294 ID=cds.MS.gene013909.t1;Parent=MS.gene013909.t1
Gene Sequence

>MS.gene013909

ATGGTGAGAAAGAGAAAACTCGTTAAAGCTTCTCAACAAGAAGAACCACCGCTCAAACAACATCAACCGGAGCCTAAACCGGAACCGGTACCCGAACCCGAACCGGAACCATACATCCCCGGCGAAGAATACGAAGAGGTTGAAGAAGAAGTTGAATACGAAGAAGTTGAAGAGGAAGTAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAAGAACAACAAATTCAAGTAGAAGAAGACGATGAACCGATCCAGAAGCTTCTAGAACCTTTCACGAAAGAACAGATCTCGAGTCTTCTTTGCGAAGCGGCTTCGAAGCATCGTGATGTTGCGGATCGGATTCGGAAGATTGCTGATGGTGATGCTTCCCATAGAAAAATCTTTGTTCATGGTTTGGGATGGGATACTACTTCAGCAACGTTGATTAACGCGTTTTCGCAGTACGGTGAAATTGAGGATTGTAAAGCTGTTACGGATAAGGTTTCAGGGAAATCTAAGGGTTATGGATTTATTTTGTTTAAGAGAAGGAGTGGAGCGAGGAATGCGTTGAAGGAGCCGCAGAAGAAGATTGGGAATAGGATGACGGCGTGTCAGCTGGCGTCTATTGGACCGGTGCAGCAAACTCCGGTGGTTGCAGCGGCGGTGGCGCCGTTGGTGGTGCCGGGTTCGGAGTATACGCAGAGGAAGATTTATATTAGTAATGTTGGAGCTGATTTGGATGCACAGAAGCTGTTTGGTTTTTTTTCGAGATTTGGAGAGATTGAGGAAGGGCCGTTAGGGCTTGATAAGGTGACGGGGAAGCCGAAAGGGTTTTGTTTGTTTGTGTATAAGAGTGCTGAGAGTGCGAGAAGGGCGTTGGAGGAGCCTCATAAGGAGTTTGAAGGGCATATTTTGCATTGTCAAAAGGCGATAGATGGTCCTAAGCCGACGAAGATACAGCATCAGCCACAGCAGCAGCAGCAACATGTGAATTCAGTGAATCATTTGAACCAATTGAATCCATTGAGTCAGAGGACGCAGTTTCAGAGACATGATAATGTTGGATTTATTGGTGGAAGTAGTGTTGCAGTTAGCCAACCAGGGCACTTAATGGCACCGGCAGGACCAGTAGCCGGGTACAATCAGGCGGCTGCTAGTGCTTCTGCTGCACAGGGGCTGAACCCTGCGCTGACTCCTGCACTTGGACAGGCGCTGACGGCGTTGCTTGCTTCTCAGGGTGCTACGTTGGGGCTGGGTAATTTATTGGGGAGTCTTGGAGCAAGTAGTGCGGTTACTCCTGGTGTTCCTGCTGCTGGTCATGGAGTTCAGAGTGGATACAGTGCTCAGCCTACCATAAGTCCAACCGTAATGGGAGCATATGGGAATGCTGTACCACAGGCTGGATTGCAGGTGCTATATCCGAACCAGCAGCTTGGACAGGGTGGTTCTGGAAGAGGGCAATATGGTGGAGCCGCACCTTATCATTAG
Protein sequence

>MS.gene013909.t1

MVRKRKLVKASQQEEPPLKQHQPEPKPEPVPEPEPEPYIPGEEYEEVEEEVEYEEVEEEVEEEEEEEEEEEEEEQQIQVEEDDEPIQKLLEPFTKEQISSLLCEAASKHRDVADRIRKIADGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNALKEPQKKIGNRMTACQLASIGPVQQTPVVAAAVAPLVVPGSEYTQRKIYISNVGADLDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHILHCQKAIDGPKPTKIQHQPQQQQQHVNSVNHLNQLNPLSQRTQFQRHDNVGFIGGSSVAVSQPGHLMAPAGPVAGYNQAAASASAAQGLNPALTPALGQALTALLASQGATLGLGNLLGSLGASSAVTPGVPAAGHGVQSGYSAQPTISPTVMGAYGNAVPQAGLQVLYPNQQLGQGGSGRGQYGGAAPYH