Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015607.t1 | XP_003631022.1 | 98.7 | 374 | 5 | 0 | 1 | 374 | 1 | 374 | 1.30E-171 | 612.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015607.t1 | Q9C5G0 | 55.0 | 404 | 115 | 11 | 1 | 374 | 1 | 367 | 7.6e-91 | 335.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015607.t1 | G7LCD1 | 98.7 | 374 | 5 | 0 | 1 | 374 | 1 | 374 | 9.7e-172 | 612.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015607.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015607 | MS.gene024963 | PPI |
| MS.gene015607 | MS.gene046944 | PPI |
| MS.gene015607 | MS.gene40528 | PPI |
| MS.gene015607 | MS.gene92360 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015607.t1 | MTR_8g106220 | 98.930 | 374 | 4 | 0 | 1 | 374 | 1 | 374 | 0.0 | 752 |
| MS.gene015607.t1 | MTR_8g106220 | 94.086 | 372 | 22 | 0 | 1 | 372 | 1 | 372 | 0.0 | 712 |
| MS.gene015607.t1 | MTR_8g106220 | 94.086 | 372 | 22 | 0 | 1 | 372 | 1 | 372 | 0.0 | 710 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015607.t1 | AT1G30970 | 64.599 | 387 | 104 | 12 | 1 | 374 | 1 | 367 | 2.24e-157 | 447 |
| MS.gene015607.t1 | AT1G30970 | 63.488 | 367 | 101 | 12 | 1 | 354 | 1 | 347 | 1.89e-142 | 410 |
| MS.gene015607.t1 | AT1G30970 | 59.317 | 322 | 98 | 12 | 66 | 374 | 14 | 315 | 6.60e-104 | 309 |
Find 136 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGGACCACCGGTATT+TGG | 0.170439 | 4.1:-1140044 | None:intergenic |
| CAGCCTTTGTTTCCTGTTGT+TGG | 0.240602 | 4.1:+1139683 | MS.gene015607:CDS |
| GGAAACAAAGGCTGTGAAAC+TGG | 0.284002 | 4.1:-1139674 | None:intergenic |
| GGAGCTTTGTTTGAGATTAC+TGG | 0.297232 | 4.1:-1140077 | None:intergenic |
| GTTCCTATTGACGCACATTT+AGG | 0.300973 | 4.1:+1139797 | MS.gene015607:CDS |
| ACAGCATACATTGGTCGAAT+TGG | 0.303869 | 4.1:-1139274 | None:intergenic |
| ATTTCTGTACTCTCTCTTCC+AGG | 0.309747 | 4.1:-1137512 | None:intergenic |
| TCCACCTTGGCTGTCTTTGA+TGG | 0.324836 | 4.1:-1139172 | None:intergenic |
| AACTCACATTCTTATGCTTC+TGG | 0.326574 | 4.1:+1140020 | MS.gene015607:CDS |
| TCTCTTCCAGGTTTCGCATT+TGG | 0.327140 | 4.1:-1137500 | None:intergenic |
| TTGAAGGACCACCGGTATTT+GGG | 0.341503 | 4.1:-1140043 | None:intergenic |
| ACCAGGCCCTCCTAATGCTT+GGG | 0.344462 | 4.1:+1139460 | MS.gene015607:CDS |
| CTTATCTATGGCTGCATCAA+TGG | 0.344752 | 4.1:-1141223 | None:intergenic |
| CTCAAGTATCCTCTTATCTA+TGG | 0.345061 | 4.1:-1141235 | None:intergenic |
| ACAAGTAGTTATCAAGCAAT+AGG | 0.347700 | 4.1:+1139836 | MS.gene015607:CDS |
| CATGTCCATTCACGTTCTTC+AGG | 0.348004 | 4.1:+1136784 | MS.gene015607:CDS |
| GACATGGGTGCAGCGGAAAA+TGG | 0.372457 | 4.1:-1139734 | None:intergenic |
| TGGAATGGTGCCACCTCCTA+TGG | 0.375927 | 4.1:+1139219 | MS.gene015607:CDS |
| ACATTCTGAACAGGAAATAA+TGG | 0.376562 | 4.1:-1139566 | None:intergenic |
| AACTGTTTCAATTCCTCCTC+CGG | 0.388888 | 4.1:+1139526 | MS.gene015607:CDS |
| AATGTCTTTAACAAAATATC+AGG | 0.390175 | 4.1:+1140265 | MS.gene015607:CDS |
| TACCAGGCCCTCCTAATGCT+TGG | 0.392438 | 4.1:+1139459 | MS.gene015607:CDS |
| CAGCATACATTGGTCGAATT+GGG | 0.393166 | 4.1:-1139273 | None:intergenic |
| AGTACAGAAATTGAAATATA+CGG | 0.394552 | 4.1:+1137524 | MS.gene015607:CDS |
| ATCCCATCAACCCCATTTGC+AGG | 0.396537 | 4.1:+1139196 | MS.gene015607:CDS |
| CTAACGAAGTCTACCTGGTT+TGG | 0.400133 | 4.1:+1140117 | MS.gene015607:CDS |
| GGCACCATTCCACCTGCAAA+TGG | 0.405114 | 4.1:-1139208 | None:intergenic |
| CCACCTGCAAATGGGGTTGA+TGG | 0.408036 | 4.1:-1139199 | None:intergenic |
| GAATTGAAACAGTTGGAGGC+TGG | 0.414100 | 4.1:-1139517 | None:intergenic |
| CATAAGAAGCTTTCCACTGC+TGG | 0.419731 | 4.1:+1136758 | MS.gene015607:CDS |
| GGAACAACTCCCCAAGCATT+AGG | 0.420757 | 4.1:-1139470 | None:intergenic |
| TATCAAGCAATAGGGATTCC+AGG | 0.422402 | 4.1:+1139845 | MS.gene015607:CDS |
| GGGGATTCCGCCAGATGTCT+TGG | 0.430401 | 4.1:+1137553 | MS.gene015607:CDS |
| GGTGTAGATGAAGGCAGTCC+AGG | 0.433874 | 4.1:-1139644 | None:intergenic |
| TAACGAAGTCTACCTGGTTT+GGG | 0.436179 | 4.1:+1140118 | MS.gene015607:CDS |
| ATGTGGTTATTTCCAACAAC+AGG | 0.437841 | 4.1:-1139695 | None:intergenic |
| AATACCGGTGGTCCTTCAAT+TGG | 0.438291 | 4.1:+1140047 | MS.gene015607:CDS |
| ATGCCTAAATGTGCGTCAAT+AGG | 0.440753 | 4.1:-1139800 | None:intergenic |
| TAATGAGCAGCCAAGACATC+TGG | 0.442885 | 4.1:-1137563 | None:intergenic |
| GGTTGATCGTGGAGGATATC+CGG | 0.443716 | 4.1:-1139245 | None:intergenic |
| GATGTCTTGGCTGCTCATTA+TGG | 0.444172 | 4.1:+1137566 | MS.gene015607:CDS |
| ATTTGACGACGAGAAGATCT+TGG | 0.447592 | 4.1:+1136694 | MS.gene015607:CDS |
| GCACCATTCCACCTGCAAAT+GGG | 0.451889 | 4.1:-1139207 | None:intergenic |
| GGAGGCCTCACATTCTGAAC+AGG | 0.464202 | 4.1:-1139575 | None:intergenic |
| AATTGAAATATACGGAATGC+AGG | 0.468518 | 4.1:+1137532 | MS.gene015607:CDS |
| AATTGAAACAGTTGGAGGCT+GGG | 0.475617 | 4.1:-1139516 | None:intergenic |
| TATGCTTCTGGCCCAAATAC+CGG | 0.477985 | 4.1:+1140032 | MS.gene015607:CDS |
| AGTGTACCATCAATAGCTCC+TGG | 0.479304 | 4.1:+1139761 | MS.gene015607:CDS |
| GAAGAAGCGCGTTGCTTCAA+AGG | 0.480211 | 4.1:+1136646 | MS.gene015607:CDS |
| TTGATGCAGCCATAGATAAG+AGG | 0.483071 | 4.1:+1141226 | MS.gene015607:CDS |
| AACATGACACTTAAAGTGCT+TGG | 0.485491 | 4.1:-1136732 | None:intergenic |
| CCCCAAGCATTAGGAGGGCC+TGG | 0.491220 | 4.1:-1139461 | None:intergenic |
| GGAAACCATGGCTGAGGTCG+AGG | 0.492794 | 4.1:-1139494 | None:intergenic |
| TTGTTTGAGATTACTGGTGG+AGG | 0.495717 | 4.1:-1140071 | None:intergenic |
| CAAGTAGTTATCAAGCAATA+GGG | 0.496128 | 4.1:+1139837 | MS.gene015607:CDS |
| AGATATAATCCTGCTGTACC+AGG | 0.505163 | 4.1:+1139443 | MS.gene015607:intron |
| TTAGGAGGGCCTGGTACAGC+AGG | 0.509971 | 4.1:-1139452 | None:intergenic |
| AGGGTGCCAAATGCGAAACC+TGG | 0.511393 | 4.1:+1137494 | MS.gene015607:intron |
| GGCTGGGGAAACCATGGCTG+AGG | 0.511844 | 4.1:-1139500 | None:intergenic |
| CAATCTCAGATTACTCCTCC+TGG | 0.513612 | 4.1:+1139626 | MS.gene015607:CDS |
| GAAAGCCCAGGAGCTATTGA+TGG | 0.514115 | 4.1:-1139767 | None:intergenic |
| GTAATCTGAGATTGTAGTGC+AGG | 0.514880 | 4.1:-1139617 | None:intergenic |
| CACCATTCCACCTGCAAATG+GGG | 0.522457 | 4.1:-1139206 | None:intergenic |
| ACTGGTGGAGGTCCAATTGA+AGG | 0.524549 | 4.1:-1140059 | None:intergenic |
| AACCAGGTAGACTTCGTTAG+TGG | 0.526452 | 4.1:-1140114 | None:intergenic |
| TTCCACCTCGACCTCAGCCA+TGG | 0.530637 | 4.1:+1139489 | MS.gene015607:CDS |
| AACCCCATTTGCAGGTGGAA+TGG | 0.531347 | 4.1:+1139204 | MS.gene015607:CDS |
| ATACTTGAGAGCAGGCTAGC+TGG | 0.531564 | 4.1:+1141249 | MS.gene015607:CDS |
| GGTTGCTGTGGGTATTGAAC+CGG | 0.533307 | 4.1:-1139545 | None:intergenic |
| CCAGGCCCTCCTAATGCTTG+GGG | 0.544705 | 4.1:+1139461 | MS.gene015607:CDS |
| ATAAGAGGATACTTGAGAGC+AGG | 0.545989 | 4.1:+1141241 | MS.gene015607:CDS |
| AATGGACATGCCACCAGCAG+TGG | 0.546032 | 4.1:-1136771 | None:intergenic |
| TTAGTGGCAGGCTGAGTAGC+GGG | 0.546294 | 4.1:-1140098 | None:intergenic |
| TGCCACTAACGAAGTCTACC+TGG | 0.547063 | 4.1:+1140112 | MS.gene015607:CDS |
| GCTGCTCATTATGGAGATGA+AGG | 0.547626 | 4.1:+1137575 | MS.gene015607:CDS |
| ATTGAAACAGTTGGAGGCTG+GGG | 0.549843 | 4.1:-1139515 | None:intergenic |
| GCTTTGTTTGAGATTACTGG+TGG | 0.553404 | 4.1:-1140074 | None:intergenic |
| CATTGGTCGAATTGGGCCCA+CGG | 0.553954 | 4.1:-1139266 | None:intergenic |
| TGTGGGTATTGAACCGGAGG+AGG | 0.557963 | 4.1:-1139539 | None:intergenic |
| AGGTAGACTTCGTTAGTGGC+AGG | 0.558673 | 4.1:-1140110 | None:intergenic |
| CACCTGCAAATGGGGTTGAT+GGG | 0.560328 | 4.1:-1139198 | None:intergenic |
| ATTGAAATATACGGAATGCA+GGG | 0.566703 | 4.1:+1137533 | MS.gene015607:CDS |
| GGCTGTGAAACTGGGACAGG+AGG | 0.567372 | 4.1:-1139665 | None:intergenic |
| GGTTGATGGGATGTCCACCT+TGG | 0.568451 | 4.1:-1139185 | None:intergenic |
| GGTTCATGATGAAAGTAGCC+AGG | 0.569158 | 4.1:+1140286 | MS.gene015607:CDS |
| GGAATGGTGCCACCTCCTAT+GGG | 0.569199 | 4.1:+1139220 | MS.gene015607:CDS |
| GGAGGAGGAATTGAAACAGT+TGG | 0.574521 | 4.1:-1139524 | None:intergenic |
| GGATGACGAGGCAATGTCCA+TGG | 0.575495 | 4.1:+1140139 | MS.gene015607:CDS |
| GTGCCACCTCCTATGGGTAC+CGG | 0.575683 | 4.1:+1139226 | MS.gene015607:CDS |
| GAAACAAAGGCTGTGAAACT+GGG | 0.576837 | 4.1:-1139673 | None:intergenic |
| GTGGACCTGAAGAACGTGAA+TGG | 0.577922 | 4.1:-1136789 | None:intergenic |
| TATTTCCTGTTCAGAATGTG+AGG | 0.578258 | 4.1:+1139570 | MS.gene015607:CDS |
| GGGACAGGAGGTGTAGATGA+AGG | 0.578656 | 4.1:-1139653 | None:intergenic |
| ATTGGGCCCACGGTTGATCG+TGG | 0.579337 | 4.1:-1139256 | None:intergenic |
| GGAACATTTGAAGAAAGCCC+AGG | 0.581787 | 4.1:-1139779 | None:intergenic |
| ACAACTCCCCAAGCATTAGG+AGG | 0.584661 | 4.1:-1139467 | None:intergenic |
| TTATCTGAATTTCGATGGGG+AGG | 0.585856 | 4.1:+1136621 | None:intergenic |
| GGAGGATATCCGGTACCCAT+AGG | 0.590455 | 4.1:-1139235 | None:intergenic |
| TGCTGTGGGTATTGAACCGG+AGG | 0.591412 | 4.1:-1139542 | None:intergenic |
| AAAGGCTGTGAAACTGGGAC+AGG | 0.593167 | 4.1:-1139668 | None:intergenic |
| GAGCAGGCTAGCTGGTCGCA+TGG | 0.599459 | 4.1:+1141257 | MS.gene015607:CDS |
| TTGCCTCGTCATCCCAAACC+AGG | 0.602208 | 4.1:-1140130 | None:intergenic |
| AAGAAGCTTTCCACTGCTGG+TGG | 0.604453 | 4.1:+1136761 | MS.gene015607:CDS |
| GAAGTAGTTGATGGCAATGG+AGG | 0.606455 | 4.1:-1139593 | None:intergenic |
| AGCGCGTTGCTTCAAAGGTG+TGG | 0.608922 | 4.1:+1136651 | MS.gene015607:CDS |
| AGTGCAGGTGAAGTAGTTGA+TGG | 0.611818 | 4.1:-1139602 | None:intergenic |
| TTTCCAACAACAGGAAACAA+AGG | 0.612122 | 4.1:-1139686 | None:intergenic |
| GGATATCCGGTACCCATAGG+AGG | 0.617032 | 4.1:-1139232 | None:intergenic |
| GTGTACCATCAATAGCTCCT+GGG | 0.617725 | 4.1:+1139762 | MS.gene015607:CDS |
| GTTGGAGGCTGGGGAAACCA+TGG | 0.620715 | 4.1:-1139506 | None:intergenic |
| ACTTGAAGACATGGGTGCAG+CGG | 0.621248 | 4.1:-1139741 | None:intergenic |
| AGGTCCAATTGAAGGACCAC+CGG | 0.621456 | 4.1:-1140051 | None:intergenic |
| AACCATGGCTGAGGTCGAGG+TGG | 0.623423 | 4.1:-1139491 | None:intergenic |
| GGAGGAATTGAAACAGTTGG+AGG | 0.628063 | 4.1:-1139521 | None:intergenic |
| GTTAGTGGCAGGCTGAGTAG+CGG | 0.628691 | 4.1:-1140099 | None:intergenic |
| GGAAAATGGTGAACTTTGAG+TGG | 0.629363 | 4.1:-1139720 | None:intergenic |
| GGTGAAGTAGTTGATGGCAA+TGG | 0.630819 | 4.1:-1139596 | None:intergenic |
| TTGAAATATACGGAATGCAG+GGG | 0.631086 | 4.1:+1137534 | MS.gene015607:CDS |
| TGATGGTACACTTGAAGACA+TGG | 0.634182 | 4.1:-1139750 | None:intergenic |
| CTACCTGGTTTGGGATGACG+AGG | 0.635306 | 4.1:+1140127 | MS.gene015607:CDS |
| ACAGGAAATAATGGTTGCTG+TGG | 0.636390 | 4.1:-1139557 | None:intergenic |
| CCATCAACCCCATTTGCAGG+TGG | 0.645938 | 4.1:+1139199 | MS.gene015607:CDS |
| TGAGCAGCCAAGACATCTGG+CGG | 0.647342 | 4.1:-1137560 | None:intergenic |
| ATATCCTCCACGATCAACCG+TGG | 0.655774 | 4.1:+1139249 | MS.gene015607:CDS |
| TCCATCAAAGACAGCCAAGG+TGG | 0.658500 | 4.1:+1139171 | MS.gene015607:CDS |
| TATCCGGTACCCATAGGAGG+TGG | 0.658522 | 4.1:-1139229 | None:intergenic |
| CAACTCCCCAAGCATTAGGA+GGG | 0.662716 | 4.1:-1139466 | None:intergenic |
| TATCCTCCACGATCAACCGT+GGG | 0.663319 | 4.1:+1139250 | MS.gene015607:CDS |
| GTAGATGAAGGCAGTCCAGG+AGG | 0.667864 | 4.1:-1139641 | None:intergenic |
| GCTTCTGGCCCAAATACCGG+TGG | 0.670008 | 4.1:+1140035 | MS.gene015607:CDS |
| GGGCCCACGGTTGATCGTGG+AGG | 0.671495 | 4.1:-1139253 | None:intergenic |
| TGTTCCATCAAAGACAGCCA+AGG | 0.680961 | 4.1:+1139168 | MS.gene015607:CDS |
| CAGGAAATAATGGTTGCTGT+GGG | 0.694551 | 4.1:-1139556 | None:intergenic |
| TGTTGTTGGAAATAACCACA+TGG | 0.708917 | 4.1:+1139697 | MS.gene015607:CDS |
| GTGAACTTTGAGTGGCCATG+TGG | 0.742581 | 4.1:-1139712 | None:intergenic |
| GATGGTACACTTGAAGACAT+GGG | 0.786065 | 4.1:-1139749 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CGTAAAAAAAAAATAAAAAA+AGG | - | chr4.1:1139098-1139117 | None:intergenic | 10.0% |
| !! | TTATAATTATAATTACCAAA+AGG | - | chr4.1:1140821-1140840 | None:intergenic | 10.0% |
| !!! | CAATCATTTTAAAAAATAAA+CGG | + | chr4.1:1140437-1140456 | MS.gene015607:intron | 10.0% |
| !!! | GTTTATTTTTTTAAAATGAT+TGG | - | chr4.1:1140660-1140679 | None:intergenic | 10.0% |
| !!! | TTTTGTACAATTTATTATTT+AGG | + | chr4.1:1139012-1139031 | MS.gene015607:intron | 10.0% |
| !!! | CAATTTATTATTTAGGATAA+AGG | + | chr4.1:1139019-1139038 | MS.gene015607:intron | 15.0% |
| !!! | CATCATTACAATTTATTTTA+TGG | + | chr4.1:1141045-1141064 | MS.gene015607:intron | 15.0% |
| !!! | TCTAGTACATTAATATTTTA+AGG | - | chr4.1:1137438-1137457 | None:intergenic | 15.0% |
| !!! | TTGAAAAAAAATCTTTTCAT+TGG | + | chr4.1:1140174-1140193 | MS.gene015607:intron | 15.0% |
| !! | AAGGGTAAAAAAAATAACAT+TGG | - | chr4.1:1140955-1140974 | None:intergenic | 20.0% |
| !! | AATGTCTTTAACAAAATATC+AGG | + | chr4.1:1140265-1140284 | MS.gene015607:CDS | 20.0% |
| !! | AGTACAGAAATTGAAATATA+CGG | + | chr4.1:1137524-1137543 | MS.gene015607:CDS | 20.0% |
| !! | ATAATCAATTATGTACATCT+CGG | - | chr4.1:1137398-1137417 | None:intergenic | 20.0% |
| !! | ATTCGAATTCTTATTCTATT+TGG | + | chr4.1:1139325-1139344 | MS.gene015607:intron | 20.0% |
| !! | CAATTTCTTCATTAACATAA+AGG | - | chr4.1:1138388-1138407 | None:intergenic | 20.0% |
| !! | GATAACTAATTAACTAACTA+TGG | - | chr4.1:1137825-1137844 | None:intergenic | 20.0% |
| !! | GTGAATTCAATTTACTATTT+AGG | + | chr4.1:1137043-1137062 | MS.gene015607:intron | 20.0% |
| !! | GTTTGATATAGTAAAAAACT+TGG | + | chr4.1:1139926-1139945 | MS.gene015607:intron | 20.0% |
| !! | TGGAAGTTACATTTATTTAA+AGG | + | chr4.1:1140729-1140748 | MS.gene015607:intron | 20.0% |
| !! | TTAAAATGGAAAATTAACAG+AGG | - | chr4.1:1137714-1137733 | None:intergenic | 20.0% |
| !! | TTATGTTAATGAAGAAATTG+AGG | + | chr4.1:1138388-1138407 | MS.gene015607:intron | 20.0% |
| !! | TTGTATACACATATTAAAAG+AGG | + | chr4.1:1140506-1140525 | MS.gene015607:intron | 20.0% |
| !! | TTGTTTACACATATTAAATG+AGG | + | chr4.1:1140395-1140414 | MS.gene015607:intron | 20.0% |
| !!! | AAACACTTTAAAAGAATAGA+TGG | + | chr4.1:1140548-1140567 | MS.gene015607:intron | 20.0% |
| !!! | ATCTATTCTTTTAAAGTGTT+TGG | - | chr4.1:1140549-1140568 | None:intergenic | 20.0% |
| !!! | ATGTATATGTGATTTTTGTT+GGG | + | chr4.1:1140919-1140938 | MS.gene015607:intron | 20.0% |
| !!! | TATGTATATGTGATTTTTGT+TGG | + | chr4.1:1140918-1140937 | MS.gene015607:intron | 20.0% |
| !!! | TATGTATTATTCTGTTTTGT+TGG | + | chr4.1:1138968-1138987 | MS.gene015607:intron | 20.0% |
| !!! | TTTACTATTTAGGTTCAATT+TGG | + | chr4.1:1137053-1137072 | MS.gene015607:intron | 20.0% |
| ! | AAAAACGAATGAAAGAGAAA+AGG | - | chr4.1:1136840-1136859 | None:intergenic | 25.0% |
| ! | AAAACGAATGAAAGAGAAAA+GGG | - | chr4.1:1136839-1136858 | None:intergenic | 25.0% |
| ! | AAATGTTTAACAGCATACAT+TGG | - | chr4.1:1139286-1139305 | None:intergenic | 25.0% |
| ! | AATAAATGTAACTTCCATTC+AGG | - | chr4.1:1140726-1140745 | None:intergenic | 25.0% |
| ! | ACAAATCATAGCATAAAATG+AGG | - | chr4.1:1136958-1136977 | None:intergenic | 25.0% |
| ! | ATAAAAGGTAGCAGATATAT+AGG | + | chr4.1:1137860-1137879 | MS.gene015607:intron | 25.0% |
| ! | ATAAGATATAAGCTATAAGC+TGG | + | chr4.1:1137171-1137190 | MS.gene015607:intron | 25.0% |
| ! | CAAATCATAGCATAAAATGA+GGG | - | chr4.1:1136957-1136976 | None:intergenic | 25.0% |
| ! | CTACAATGGAATCATTAAAA+TGG | - | chr4.1:1137728-1137747 | None:intergenic | 25.0% |
| ! | CTTATAAGTAAGCACTTATA+AGG | - | chr4.1:1137106-1137125 | None:intergenic | 25.0% |
| ! | TAATCAATTATGTACATCTC+GGG | - | chr4.1:1137397-1137416 | None:intergenic | 25.0% |
| ! | TAGTTAATTAGTTATCTGCA+GGG | + | chr4.1:1137829-1137848 | MS.gene015607:intron | 25.0% |
| ! | TCAATAAGAACTATGAAACA+AGG | - | chr4.1:1137632-1137651 | None:intergenic | 25.0% |
| ! | TGAAATTGATCATTAATCTG+AGG | + | chr4.1:1138850-1138869 | MS.gene015607:intron | 25.0% |
| ! | TGTACTTGTAGTAGTTATTA+AGG | - | chr4.1:1137673-1137692 | None:intergenic | 25.0% |
| ! | TTAGTTAATTAGTTATCTGC+AGG | + | chr4.1:1137828-1137847 | MS.gene015607:intron | 25.0% |
| !! | ACCACAACAAACAAATATTT+TGG | - | chr4.1:1141143-1141162 | None:intergenic | 25.0% |
| !! | ATATTTTCATTCGGTTTTTC+TGG | + | chr4.1:1138779-1138798 | MS.gene015607:intron | 25.0% |
| !! | CATACTACCTTTTTATTACT+TGG | + | chr4.1:1140314-1140333 | MS.gene015607:intron | 25.0% |
| !! | TCCAAAATATTTGTTTGTTG+TGG | + | chr4.1:1141139-1141158 | MS.gene015607:intron | 25.0% |
| !! | TTCTTATTCTATTTGGAATG+TGG | + | chr4.1:1139332-1139351 | MS.gene015607:intron | 25.0% |
| !!! | ATTGTATCGTTTTTCTTTTC+AGG | + | chr4.1:1137474-1137493 | MS.gene015607:intron | 25.0% |
| !!! | TCTCTTTCATTCGTTTTTTA+GGG | + | chr4.1:1136842-1136861 | MS.gene015607:intron | 25.0% |
| !!! | TTCTCTTTCATTCGTTTTTT+AGG | + | chr4.1:1136841-1136860 | MS.gene015607:intron | 25.0% |
| !!! | TTGTATCGTTTTTCTTTTCA+GGG | + | chr4.1:1137475-1137494 | MS.gene015607:intron | 25.0% |
| AAATTGAGGAAGAAATTGAC+TGG | + | chr4.1:1138402-1138421 | MS.gene015607:intron | 30.0% | |
| AACCTATCCGTGAAAATAAA+TGG | - | chr4.1:1137974-1137993 | None:intergenic | 30.0% | |
| AAGAGAAAAGGGAATATACT+TGG | - | chr4.1:1136828-1136847 | None:intergenic | 30.0% | |
| AATTGAAATATACGGAATGC+AGG | + | chr4.1:1137532-1137551 | MS.gene015607:CDS | 30.0% | |
| ACAAGTAGTTATCAAGCAAT+AGG | + | chr4.1:1139836-1139855 | MS.gene015607:CDS | 30.0% | |
| ACATCTGTTACAGTTATACA+GGG | - | chr4.1:1137784-1137803 | None:intergenic | 30.0% | |
| ACATTCTGAACAGGAAATAA+TGG | - | chr4.1:1139569-1139588 | None:intergenic | 30.0% | |
| AGCAACTCCAAGTAATAAAA+AGG | - | chr4.1:1140324-1140343 | None:intergenic | 30.0% | |
| ATTGAAATATACGGAATGCA+GGG | + | chr4.1:1137533-1137552 | MS.gene015607:CDS | 30.0% | |
| CAAGTAGTTATCAAGCAATA+GGG | + | chr4.1:1139837-1139856 | MS.gene015607:CDS | 30.0% | |
| CCTTAGTTTACAACTTACAT+GGG | + | chr4.1:1138120-1138139 | MS.gene015607:intron | 30.0% | |
| GCAATGAAAAAAAACACACT+TGG | - | chr4.1:1137003-1137022 | None:intergenic | 30.0% | |
| TACATCTGTTACAGTTATAC+AGG | - | chr4.1:1137785-1137804 | None:intergenic | 30.0% | |
| TAGCAGATATATAGGAGTTA+GGG | + | chr4.1:1137868-1137887 | MS.gene015607:intron | 30.0% | |
| TATCCGTGAAAATAAATGGT+CGG | - | chr4.1:1137970-1137989 | None:intergenic | 30.0% | |
| TGTACGAATGAAGAAGAAAA+AGG | - | chr4.1:1136880-1136899 | None:intergenic | 30.0% | |
| TTGTTGGTATTATTGACGTT+AGG | + | chr4.1:1138984-1139003 | MS.gene015607:intron | 30.0% | |
| ! | AAAGAAAATAAAGCGTTACC+TGG | - | chr4.1:1139866-1139885 | None:intergenic | 30.0% |
| ! | ACTAGTCTACTATTGTTTCA+TGG | + | chr4.1:1140200-1140219 | MS.gene015607:intron | 30.0% |
| ! | GCTATTCTACTAATTCCTTT+TGG | + | chr4.1:1140803-1140822 | MS.gene015607:intron | 30.0% |
| ! | TCTAATATCTCCATTTTCCA+AGG | + | chr4.1:1138469-1138488 | MS.gene015607:intron | 30.0% |
| ! | TTTTATCGTGTACAAATGCT+GGG | - | chr4.1:1140895-1140914 | None:intergenic | 30.0% |
| !! | ATTTATTTTCACGGATAGGT+TGG | + | chr4.1:1137973-1137992 | MS.gene015607:intron | 30.0% |
| !! | TTGTTTGTTGTGGTAATTTG+TGG | + | chr4.1:1141149-1141168 | MS.gene015607:intron | 30.0% |
| !! | TTTATTTTCACGGATAGGTT+GGG | + | chr4.1:1137974-1137993 | MS.gene015607:intron | 30.0% |
| !!! | CAAACAAATATTTTGGAGCA+TGG | - | chr4.1:1141136-1141155 | None:intergenic | 30.0% |
| !!! | GTTTTTTGTTCAACCCTAAT+AGG | + | chr4.1:1138818-1138837 | MS.gene015607:intron | 30.0% |
| AAAAGGTAGTATGACTTACC+TGG | - | chr4.1:1140307-1140326 | None:intergenic | 35.0% | |
| AAACTTTCGAATCAAGCGAA+GGG | - | chr4.1:1140973-1140992 | None:intergenic | 35.0% | |
| AAATGTAACTTCCATTCAGG+TGG | - | chr4.1:1140723-1140742 | None:intergenic | 35.0% | |
| AACTCACATTCTTATGCTTC+TGG | + | chr4.1:1140020-1140039 | MS.gene015607:CDS | 35.0% | |
| AAGCACTTGTAAAACTGCTT+AGG | - | chr4.1:1137279-1137298 | None:intergenic | 35.0% | |
| AAGCTATACTTGAGAGTTGA+TGG | + | chr4.1:1137200-1137219 | MS.gene015607:intron | 35.0% | |
| AATGAAAATATGAGCAGACC+AGG | - | chr4.1:1138770-1138789 | None:intergenic | 35.0% | |
| AATGTAACTTCCATTCAGGT+GGG | - | chr4.1:1140722-1140741 | None:intergenic | 35.0% | |
| AGACCCTTATAGTAACAAAG+AGG | + | chr4.1:1137335-1137354 | MS.gene015607:intron | 35.0% | |
| AGCAGATATATAGGAGTTAG+GGG | + | chr4.1:1137869-1137888 | MS.gene015607:intron | 35.0% | |
| AGTTGCAGTTATTATGAGAC+CGG | + | chr4.1:1138561-1138580 | MS.gene015607:intron | 35.0% | |
| ATTGTAGTGTCAGAAATAGG+AGG | + | chr4.1:1137741-1137760 | MS.gene015607:intron | 35.0% | |
| CACAATACATGTCAGGTATT+CGG | - | chr4.1:1138938-1138957 | None:intergenic | 35.0% | |
| CATCTGTTACAGTTATACAG+GGG | - | chr4.1:1137783-1137802 | None:intergenic | 35.0% | |
| CCCATGTAAGTTGTAAACTA+AGG | - | chr4.1:1138123-1138142 | None:intergenic | 35.0% | |
| CTCAAGTATCCTCTTATCTA+TGG | - | chr4.1:1141238-1141257 | None:intergenic | 35.0% | |
| CTCCCTCTTTGTTACTATAA+GGG | - | chr4.1:1137341-1137360 | None:intergenic | 35.0% | |
| GAAAATAAATGGTCGGAGAT+GGG | - | chr4.1:1137963-1137982 | None:intergenic | 35.0% | |
| GACCCTTATAGTAACAAAGA+GGG | + | chr4.1:1137336-1137355 | MS.gene015607:intron | 35.0% | |
| GCCTTAGTTTACAACTTACA+TGG | + | chr4.1:1138119-1138138 | MS.gene015607:intron | 35.0% | |
| GTAGCAGATATATAGGAGTT+AGG | + | chr4.1:1137867-1137886 | MS.gene015607:intron | 35.0% | |
| GTCTCATAATAACTGCAACT+TGG | - | chr4.1:1138561-1138580 | None:intergenic | 35.0% | |
| TAATTAGTTATCTGCAGGGT+GGG | + | chr4.1:1137833-1137852 | MS.gene015607:intron | 35.0% | |
| TATTTCCTGTTCAGAATGTG+AGG | + | chr4.1:1139570-1139589 | MS.gene015607:CDS | 35.0% | |
| TCAAGCTATGCTTCCAATTT+GGG | + | chr4.1:1140759-1140778 | MS.gene015607:intron | 35.0% | |
| TCCATTGTAGTGTCAGAAAT+AGG | + | chr4.1:1137738-1137757 | MS.gene015607:intron | 35.0% | |
| TGAAAATAAATGGTCGGAGA+TGG | - | chr4.1:1137964-1137983 | None:intergenic | 35.0% | |
| TGTTGTTGGAAATAACCACA+TGG | + | chr4.1:1139697-1139716 | MS.gene015607:CDS | 35.0% | |
| TTAATTAGTTATCTGCAGGG+TGG | + | chr4.1:1137832-1137851 | MS.gene015607:intron | 35.0% | |
| TTCAAGAATATGACTGACCA+TGG | - | chr4.1:1140159-1140178 | None:intergenic | 35.0% | |
| TTCAATGCCTAGTCCTATTA+GGG | - | chr4.1:1138834-1138853 | None:intergenic | 35.0% | |
| TTGAAATATACGGAATGCAG+GGG | + | chr4.1:1137534-1137553 | MS.gene015607:CDS | 35.0% | |
| TTGTAAACTAAGGCAGAACT+TGG | - | chr4.1:1138113-1138132 | None:intergenic | 35.0% | |
| TTGTAGTGTCAGAAATAGGA+GGG | + | chr4.1:1137742-1137761 | MS.gene015607:intron | 35.0% | |
| TTTCAATGCCTAGTCCTATT+AGG | - | chr4.1:1138835-1138854 | None:intergenic | 35.0% | |
| TTTCCAACAACAGGAAACAA+AGG | - | chr4.1:1139689-1139708 | None:intergenic | 35.0% | |
| ! | AACATGACACTTAAAGTGCT+TGG | - | chr4.1:1136735-1136754 | None:intergenic | 35.0% |
| ! | ACGGCAAACAAAAAAAGTGT+AGG | + | chr4.1:1140456-1140475 | MS.gene015607:intron | 35.0% |
| ! | AGAAGGGGTTACTTAGATTT+TGG | + | chr4.1:1138053-1138072 | MS.gene015607:intron | 35.0% |
| ! | AGGTCATCTGTTCAGTTTTT+CGG | - | chr4.1:1138750-1138769 | None:intergenic | 35.0% |
| ! | ATGTGGTTATTTCCAACAAC+AGG | - | chr4.1:1139698-1139717 | None:intergenic | 35.0% |
| ! | CTTTTATCGTGTACAAATGC+TGG | - | chr4.1:1140896-1140915 | None:intergenic | 35.0% |
| ! | GGTCTGCTCATATTTTCATT+CGG | + | chr4.1:1138770-1138789 | MS.gene015607:intron | 35.0% |
| ! | TCAAGGATCTGAAATATGCA+TGG | + | chr4.1:1138332-1138351 | MS.gene015607:intron | 35.0% |
| ! | TTCGCTTGATTCGAAAGTTT+GGG | + | chr4.1:1140973-1140992 | MS.gene015607:intron | 35.0% |
| ! | TTTTCATTTTCTTGTCCCTC+TGG | + | chr4.1:1139973-1139992 | MS.gene015607:intron | 35.0% |
| !! | ATTCGAAAGTTTGGGGTTTT+GGG | + | chr4.1:1140981-1141000 | MS.gene015607:intron | 35.0% |
| !! | GACCATTTATTTTCACGGAT+AGG | + | chr4.1:1137969-1137988 | MS.gene015607:intron | 35.0% |
| !! | TCAGTTTTTCGGTTGTGTAA+GGG | - | chr4.1:1138739-1138758 | None:intergenic | 35.0% |
| !! | TCCTATTTCTGACACTACAA+TGG | - | chr4.1:1137742-1137761 | None:intergenic | 35.0% |
| !! | TCTCCGACCATTTATTTTCA+CGG | + | chr4.1:1137964-1137983 | MS.gene015607:intron | 35.0% |
| !! | TTCAGTTTTTCGGTTGTGTA+AGG | - | chr4.1:1138740-1138759 | None:intergenic | 35.0% |
| !! | TTTTGATGCTTTGTTGCTGT+AGG | + | chr4.1:1140232-1140251 | MS.gene015607:intron | 35.0% |
| !!! | TCATTCGGTTTTTCTGGTTT+GGG | + | chr4.1:1138785-1138804 | MS.gene015607:intron | 35.0% |
| !!! | TTCATTCGGTTTTTCTGGTT+TGG | + | chr4.1:1138784-1138803 | MS.gene015607:intron | 35.0% |
| AAATGGATAGCAGAGCAAGA+AGG | + | chr4.1:1138027-1138046 | MS.gene015607:intron | 40.0% | |
| AACTGTTTCAATTCCTCCTC+CGG | + | chr4.1:1139526-1139545 | MS.gene015607:CDS | 40.0% | |
| AAGCATAAAGCCTACTCATC+TGG | - | chr4.1:1140358-1140377 | None:intergenic | 40.0% | |
| AAGCTATGCTTCCAATTTGG+GGG | + | chr4.1:1140761-1140780 | MS.gene015607:intron | 40.0% | |
| AATTGAAACAGTTGGAGGCT+GGG | - | chr4.1:1139519-1139538 | None:intergenic | 40.0% | |
| ACAGCATACATTGGTCGAAT+TGG | - | chr4.1:1139277-1139296 | None:intergenic | 40.0% | |
| ACAGGAAATAATGGTTGCTG+TGG | - | chr4.1:1139560-1139579 | None:intergenic | 40.0% | |
| ACGAATGAGCAAAAGTCTGT+TGG | - | chr4.1:1141023-1141042 | None:intergenic | 40.0% | |
| ACTTCAACTATCCTTGACCT+TGG | - | chr4.1:1138489-1138508 | None:intergenic | 40.0% | |
| AGAGTTTGGATCTCTTGCAT+AGG | + | chr4.1:1141109-1141128 | MS.gene015607:intron | 40.0% | |
| AGATATAATCCTGCTGTACC+AGG | + | chr4.1:1139443-1139462 | MS.gene015607:intron | 40.0% | |
| ATAAGAGGATACTTGAGAGC+AGG | + | chr4.1:1141241-1141260 | MS.gene015607:CDS | 40.0% | |
| ATGCCTAAATGTGCGTCAAT+AGG | - | chr4.1:1139803-1139822 | None:intergenic | 40.0% | |
| ATTTCTGTACTCTCTCTTCC+AGG | - | chr4.1:1137515-1137534 | None:intergenic | 40.0% | |
| ATTTGACGACGAGAAGATCT+TGG | + | chr4.1:1136694-1136713 | MS.gene015607:CDS | 40.0% | |
| CAAACTTTCGAATCAAGCGA+AGG | - | chr4.1:1140974-1140993 | None:intergenic | 40.0% | |
| CAAGCTATGCTTCCAATTTG+GGG | + | chr4.1:1140760-1140779 | MS.gene015607:intron | 40.0% | |
| CAGCATACATTGGTCGAATT+GGG | - | chr4.1:1139276-1139295 | None:intergenic | 40.0% | |
| CAGGAAATAATGGTTGCTGT+GGG | - | chr4.1:1139559-1139578 | None:intergenic | 40.0% | |
| CAGTATGTATACAGCGAACA+TGG | + | chr4.1:1138658-1138677 | MS.gene015607:intron | 40.0% | |
| CCTCCCTCTTTGTTACTATA+AGG | - | chr4.1:1137342-1137361 | None:intergenic | 40.0% | |
| CCTTATAGTAACAAAGAGGG+AGG | + | chr4.1:1137339-1137358 | MS.gene015607:intron | 40.0% | |
| CGAATACCTGACATGTATTG+TGG | + | chr4.1:1138936-1138955 | MS.gene015607:intron | 40.0% | |
| CGAATGAGCAAAAGTCTGTT+GGG | - | chr4.1:1141022-1141041 | None:intergenic | 40.0% | |
| CTATCCTTGACCTTGGAAAA+TGG | - | chr4.1:1138482-1138501 | None:intergenic | 40.0% | |
| CTTATCTATGGCTGCATCAA+TGG | - | chr4.1:1141226-1141245 | None:intergenic | 40.0% | |
| GAAAAACTGAACAGATGACC+TGG | + | chr4.1:1138749-1138768 | MS.gene015607:intron | 40.0% | |
| GAAACAAAGGCTGTGAAACT+GGG | - | chr4.1:1139676-1139695 | None:intergenic | 40.0% | |
| GACACAGTTGCATATATCCA+CGG | + | chr4.1:1138087-1138106 | MS.gene015607:intron | 40.0% | |
| GATGGTACACTTGAAGACAT+GGG | - | chr4.1:1139752-1139771 | None:intergenic | 40.0% | |
| GATTTCTTATGCTCCTGATG+TGG | - | chr4.1:1138223-1138242 | None:intergenic | 40.0% | |
| GCAGATATATAGGAGTTAGG+GGG | + | chr4.1:1137870-1137889 | MS.gene015607:intron | 40.0% | |
| GGAAAATGGTGAACTTTGAG+TGG | - | chr4.1:1139723-1139742 | None:intergenic | 40.0% | |
| GGAACAAGTGAATTCAGACT+TGG | + | chr4.1:1141066-1141085 | MS.gene015607:intron | 40.0% | |
| GTCAAGCTATGCTTCCAATT+TGG | + | chr4.1:1140758-1140777 | MS.gene015607:intron | 40.0% | |
| GTGGATATATGCAACTGTGT+CGG | - | chr4.1:1138088-1138107 | None:intergenic | 40.0% | |
| GTTCCTATTGACGCACATTT+AGG | + | chr4.1:1139797-1139816 | MS.gene015607:CDS | 40.0% | |
| GTTGCAGTTATTATGAGACC+GGG | + | chr4.1:1138562-1138581 | MS.gene015607:intron | 40.0% | |
| TAACGAAGTCTACCTGGTTT+GGG | + | chr4.1:1140118-1140137 | MS.gene015607:CDS | 40.0% | |
| TATCAAGCAATAGGGATTCC+AGG | + | chr4.1:1139845-1139864 | MS.gene015607:CDS | 40.0% | |
| TCACATCTAACCAGATGAGT+AGG | + | chr4.1:1140345-1140364 | MS.gene015607:intron | 40.0% | |
| TCTTTAGATAGCCCCCAAAT+TGG | - | chr4.1:1140775-1140794 | None:intergenic | 40.0% | |
| TGATGGTACACTTGAAGACA+TGG | - | chr4.1:1139753-1139772 | None:intergenic | 40.0% | |
| TGCAGGGTGGGTATTATAAA+AGG | + | chr4.1:1137845-1137864 | MS.gene015607:intron | 40.0% | |
| TGTTCAACCCTAATAGGACT+AGG | + | chr4.1:1138824-1138843 | MS.gene015607:intron | 40.0% | |
| TTGATGCAGCCATAGATAAG+AGG | + | chr4.1:1141226-1141245 | MS.gene015607:CDS | 40.0% | |
| ! | ATCTCCATTTTCCAAGGTCA+AGG | + | chr4.1:1138475-1138494 | MS.gene015607:intron | 40.0% |
| ! | CAGGAGCATAAGAAATCTCA+AGG | + | chr4.1:1138226-1138245 | MS.gene015607:intron | 40.0% |
| ! | CTTCGCTTGATTCGAAAGTT+TGG | + | chr4.1:1140972-1140991 | MS.gene015607:intron | 40.0% |
| ! | GGTTGTGTAAGGGTTAGTAA+TGG | - | chr4.1:1138729-1138748 | None:intergenic | 40.0% |
| ! | GTAATCTGAGATTGTAGTGC+AGG | - | chr4.1:1139620-1139639 | None:intergenic | 40.0% |
| ! | TCGCTTGATTCGAAAGTTTG+GGG | + | chr4.1:1140974-1140993 | MS.gene015607:intron | 40.0% |
| ! | TGTGTAAGGGTTAGTAATGG+TGG | - | chr4.1:1138726-1138745 | None:intergenic | 40.0% |
| ! | TTGTCCCTCTGGTTTCTTAT+AGG | + | chr4.1:1139984-1140003 | MS.gene015607:intron | 40.0% |
| ! | TTGTTTGAGATTACTGGTGG+AGG | - | chr4.1:1140074-1140093 | None:intergenic | 40.0% |
| !! | GATTCGAAAGTTTGGGGTTT+TGG | + | chr4.1:1140980-1140999 | MS.gene015607:intron | 40.0% |
| !! | GCTTTGTTTGAGATTACTGG+TGG | - | chr4.1:1140077-1140096 | None:intergenic | 40.0% |
| !! | GGAGCTTTGTTTGAGATTAC+TGG | - | chr4.1:1140080-1140099 | None:intergenic | 40.0% |
| !! | GTTACTTAGATTTTGGCCGT+CGG | + | chr4.1:1138060-1138079 | MS.gene015607:intron | 40.0% |
| !!! | ACTTGGTGACGTTTTCTTTG+TGG | - | chr4.1:1136811-1136830 | None:intergenic | 40.0% |
| AAACCAGTCACAGTGGTTCA+AGG | - | chr4.1:1139889-1139908 | None:intergenic | 45.0% | |
| AACCAGGTAGACTTCGTTAG+TGG | - | chr4.1:1140117-1140136 | None:intergenic | 45.0% | |
| AAGACAGTGATGCGACAAGT+CGG | - | chr4.1:1138620-1138639 | None:intergenic | 45.0% | |
| AATACCGGTGGTCCTTCAAT+TGG | + | chr4.1:1140047-1140066 | MS.gene015607:CDS | 45.0% | |
| AATAGCCTTCAACCGTGAGA+AGG | + | chr4.1:1138283-1138302 | MS.gene015607:intron | 45.0% | |
| AATCGTCTTCAACCGTGAGA+AGG | + | chr4.1:1138194-1138213 | MS.gene015607:intron | 45.0% | |
| AGAGCAAGAAGGAGAAGAAG+GGG | + | chr4.1:1138038-1138057 | MS.gene015607:intron | 45.0% | |
| AGTGCAGGTGAAGTAGTTGA+TGG | - | chr4.1:1139605-1139624 | None:intergenic | 45.0% | |
| AGTGTACCATCAATAGCTCC+TGG | + | chr4.1:1139761-1139780 | MS.gene015607:CDS | 45.0% | |
| AGTTATTATGAGACCGGGTC+GGG | + | chr4.1:1138567-1138586 | MS.gene015607:intron | 45.0% | |
| ATTGAAACAGTTGGAGGCTG+GGG | - | chr4.1:1139518-1139537 | None:intergenic | 45.0% | |
| ATTGAAGGACCACCGGTATT+TGG | - | chr4.1:1140047-1140066 | None:intergenic | 45.0% | |
| CAACAGCCACAATACATGTC+AGG | - | chr4.1:1138945-1138964 | None:intergenic | 45.0% | |
| CAATCTCAGATTACTCCTCC+TGG | + | chr4.1:1139626-1139645 | MS.gene015607:CDS | 45.0% | |
| CAGAGCAAGAAGGAGAAGAA+GGG | + | chr4.1:1138037-1138056 | MS.gene015607:intron | 45.0% | |
| CAGTTATTATGAGACCGGGT+CGG | + | chr4.1:1138566-1138585 | MS.gene015607:intron | 45.0% | |
| CATAAGAAGCTTTCCACTGC+TGG | + | chr4.1:1136758-1136777 | MS.gene015607:CDS | 45.0% | |
| CATGTCCATTCACGTTCTTC+AGG | + | chr4.1:1136784-1136803 | MS.gene015607:CDS | 45.0% | |
| CCCACCTATAAGAAACCAGA+GGG | - | chr4.1:1139991-1140010 | None:intergenic | 45.0% | |
| CTAACGAAGTCTACCTGGTT+TGG | + | chr4.1:1140117-1140136 | MS.gene015607:CDS | 45.0% | |
| GAATTGAAACAGTTGGAGGC+TGG | - | chr4.1:1139520-1139539 | None:intergenic | 45.0% | |
| GACAAATGGTTGGATCCAGT+CGG | + | chr4.1:1137895-1137914 | MS.gene015607:intron | 45.0% | |
| GATATATAGGAGTTAGGGGG+TGG | + | chr4.1:1137873-1137892 | MS.gene015607:intron | 45.0% | |
| GATGTCTTGGCTGCTCATTA+TGG | + | chr4.1:1137566-1137585 | MS.gene015607:CDS | 45.0% | |
| GCTGCTCATTATGGAGATGA+AGG | + | chr4.1:1137575-1137594 | MS.gene015607:CDS | 45.0% | |
| GGAAACAAAGGCTGTGAAAC+TGG | - | chr4.1:1139677-1139696 | None:intergenic | 45.0% | |
| GGAACATTTGAAGAAAGCCC+AGG | - | chr4.1:1139782-1139801 | None:intergenic | 45.0% | |
| GGAGGAATTGAAACAGTTGG+AGG | - | chr4.1:1139524-1139543 | None:intergenic | 45.0% | |
| GGAGGAGGAATTGAAACAGT+TGG | - | chr4.1:1139527-1139546 | None:intergenic | 45.0% | |
| GGGATGAAGGATCACAAAGT+TGG | - | chr4.1:1140875-1140894 | None:intergenic | 45.0% | |
| GGTTCATGATGAAAGTAGCC+AGG | + | chr4.1:1140286-1140305 | MS.gene015607:CDS | 45.0% | |
| GTATACAGCGAACATGGTAG+CGG | + | chr4.1:1138664-1138683 | MS.gene015607:intron | 45.0% | |
| GTGTACAAATGCTGGGATGA+AGG | - | chr4.1:1140888-1140907 | None:intergenic | 45.0% | |
| GTGTACCATCAATAGCTCCT+GGG | + | chr4.1:1139762-1139781 | MS.gene015607:CDS | 45.0% | |
| GTGTCAAAAACCAGTCACAG+TGG | - | chr4.1:1139896-1139915 | None:intergenic | 45.0% | |
| TAATGAGCAGCCAAGACATC+TGG | - | chr4.1:1137566-1137585 | None:intergenic | 45.0% | |
| TATGCTTCTGGCCCAAATAC+CGG | + | chr4.1:1140032-1140051 | MS.gene015607:CDS | 45.0% | |
| TCAGAAATAGGAGGGATGCA+GGG | + | chr4.1:1137750-1137769 | MS.gene015607:intron | 45.0% | |
| TCAGCTTCTTTCGCAGAGTT+TGG | + | chr4.1:1141095-1141114 | MS.gene015607:intron | 45.0% | |
| TCCCACCTATAAGAAACCAG+AGG | - | chr4.1:1139992-1140011 | None:intergenic | 45.0% | |
| TCTCTTCCAGGTTTCGCATT+TGG | - | chr4.1:1137503-1137522 | None:intergenic | 45.0% | |
| TGTTCCATCAAAGACAGCCA+AGG | + | chr4.1:1139168-1139187 | MS.gene015607:CDS | 45.0% | |
| TTCTTATGCTCCTGATGTGG+AGG | - | chr4.1:1138220-1138239 | None:intergenic | 45.0% | |
| TTGAAGGACCACCGGTATTT+GGG | - | chr4.1:1140046-1140065 | None:intergenic | 45.0% | |
| TTTCCTTGAACCACTGTGAC+TGG | + | chr4.1:1139883-1139902 | MS.gene015607:intron | 45.0% | |
| ! | CAGCCTTTGTTTCCTGTTGT+TGG | + | chr4.1:1139683-1139702 | MS.gene015607:CDS | 45.0% |
| ! | CCCTCTGGTTTCTTATAGGT+GGG | + | chr4.1:1139988-1140007 | MS.gene015607:intron | 45.0% |
| ! | TCCCTCTGGTTTCTTATAGG+TGG | + | chr4.1:1139987-1140006 | MS.gene015607:intron | 45.0% |
| ! | TGATGCTTTGTTGCTGTAGG+AGG | + | chr4.1:1140235-1140254 | MS.gene015607:intron | 45.0% |
| ! | TTGGAAGCATAGCTTGACAG+TGG | - | chr4.1:1140756-1140775 | None:intergenic | 45.0% |
| !! | ATTTTCACGGATAGGTTGGG+TGG | + | chr4.1:1137977-1137996 | MS.gene015607:intron | 45.0% |
| !! | GAAGTAGTTGATGGCAATGG+AGG | - | chr4.1:1139596-1139615 | None:intergenic | 45.0% |
| !! | GGTGAAGTAGTTGATGGCAA+TGG | - | chr4.1:1139599-1139618 | None:intergenic | 45.0% |
| !!! | CGGTTTTTCTGGTTTGGGTT+GGG | + | chr4.1:1138790-1138809 | MS.gene015607:intron | 45.0% |
| !!! | GGTTTTTCTGGTTTGGGTTG+GGG | + | chr4.1:1138791-1138810 | MS.gene015607:intron | 45.0% |
| !!! | TCGGTTTTTCTGGTTTGGGT+TGG | + | chr4.1:1138789-1138808 | MS.gene015607:intron | 45.0% |
| !!! | AATCATTTTAAAAAAATAAA+CGG | + | chr4.1:1140659-1140678 | MS.gene015607:intron | 5.0% |
| AAAGGCTGTGAAACTGGGAC+AGG | - | chr4.1:1139671-1139690 | None:intergenic | 50.0% | |
| AAATAGGAGGGATGCAGGGA+AGG | + | chr4.1:1137754-1137773 | MS.gene015607:intron | 50.0% | |
| AACCCCATTTGCAGGTGGAA+TGG | + | chr4.1:1139204-1139223 | MS.gene015607:CDS | 50.0% | |
| AAGAAGCTTTCCACTGCTGG+TGG | + | chr4.1:1136761-1136780 | MS.gene015607:CDS | 50.0% | |
| ACAACTCCCCAAGCATTAGG+AGG | - | chr4.1:1139470-1139489 | None:intergenic | 50.0% | |
| ACTGGTGGAGGTCCAATTGA+AGG | - | chr4.1:1140062-1140081 | None:intergenic | 50.0% | |
| ACTTGAAGACATGGGTGCAG+CGG | - | chr4.1:1139744-1139763 | None:intergenic | 50.0% | |
| AGGTAGACTTCGTTAGTGGC+AGG | - | chr4.1:1140113-1140132 | None:intergenic | 50.0% | |
| AGGTCCAATTGAAGGACCAC+CGG | - | chr4.1:1140054-1140073 | None:intergenic | 50.0% | |
| AGTGAATTCAGACTTGGCCC+AGG | + | chr4.1:1141072-1141091 | MS.gene015607:intron | 50.0% | |
| ATACTTGAGAGCAGGCTAGC+TGG | + | chr4.1:1141249-1141268 | MS.gene015607:CDS | 50.0% | |
| ATATCCTCCACGATCAACCG+TGG | + | chr4.1:1139249-1139268 | MS.gene015607:CDS | 50.0% | |
| ATCCCATCAACCCCATTTGC+AGG | + | chr4.1:1139196-1139215 | MS.gene015607:CDS | 50.0% | |
| ATCTGCAGCAGCAGAGAGAT+AGG | - | chr4.1:1139427-1139446 | None:intergenic | 50.0% | |
| CAACTCCCCAAGCATTAGGA+GGG | - | chr4.1:1139469-1139488 | None:intergenic | 50.0% | |
| CACCATCTAGAGAAATCCGC+CGG | + | chr4.1:1137923-1137942 | MS.gene015607:intron | 50.0% | |
| CACCATTCCACCTGCAAATG+GGG | - | chr4.1:1139209-1139228 | None:intergenic | 50.0% | |
| CATTCAGGTGGGAGGCAAAA+GGG | - | chr4.1:1140711-1140730 | None:intergenic | 50.0% | |
| GAAAGCCCAGGAGCTATTGA+TGG | - | chr4.1:1139770-1139789 | None:intergenic | 50.0% | |
| GCACCATTCCACCTGCAAAT+GGG | - | chr4.1:1139210-1139229 | None:intergenic | 50.0% | |
| GCAGAGCAAGAAGGAGAAGA+AGG | + | chr4.1:1138036-1138055 | MS.gene015607:intron | 50.0% | |
| GGAACAACTCCCCAAGCATT+AGG | - | chr4.1:1139473-1139492 | None:intergenic | 50.0% | |
| GGTTGATCGTGGAGGATATC+CGG | - | chr4.1:1139248-1139267 | None:intergenic | 50.0% | |
| GTAACTTCCATTCAGGTGGG+AGG | - | chr4.1:1140719-1140738 | None:intergenic | 50.0% | |
| GTCAGAAATAGGAGGGATGC+AGG | + | chr4.1:1137749-1137768 | MS.gene015607:intron | 50.0% | |
| GTGAACTTTGAGTGGCCATG+TGG | - | chr4.1:1139715-1139734 | None:intergenic | 50.0% | |
| GTGGACCTGAAGAACGTGAA+TGG | - | chr4.1:1136792-1136811 | None:intergenic | 50.0% | |
| TATCCTCCACGATCAACCGT+GGG | + | chr4.1:1139250-1139269 | MS.gene015607:CDS | 50.0% | |
| TCCACCTTGGCTGTCTTTGA+TGG | - | chr4.1:1139175-1139194 | None:intergenic | 50.0% | |
| TCCATCAAAGACAGCCAAGG+TGG | + | chr4.1:1139171-1139190 | MS.gene015607:CDS | 50.0% | |
| TCTGCGAAAGAAGCTGACCT+GGG | - | chr4.1:1141092-1141111 | None:intergenic | 50.0% | |
| TGCCACTAACGAAGTCTACC+TGG | + | chr4.1:1140112-1140131 | MS.gene015607:CDS | 50.0% | |
| TTAGGGGGTGGACAAATGGT+TGG | + | chr4.1:1137885-1137904 | MS.gene015607:intron | 50.0% | |
| ! | CACCTGCAAATGGGGTTGAT+GGG | - | chr4.1:1139201-1139220 | None:intergenic | 50.0% |
| ! | CTAGATGGTGGTTTACCGAC+TGG | - | chr4.1:1137913-1137932 | None:intergenic | 50.0% |
| ! | GAAGAAGCGCGTTGCTTCAA+AGG | + | chr4.1:1136646-1136665 | MS.gene015607:CDS | 50.0% |
| !! | ATTAGTCTTGAGACCCGACC+CGG | - | chr4.1:1138583-1138602 | None:intergenic | 50.0% |
| !! | GGTTGCTGTGGGTATTGAAC+CGG | - | chr4.1:1139548-1139567 | None:intergenic | 50.0% |
| !! | TGGTAGCGGTCAGTTTCTCA+TGG | + | chr4.1:1138678-1138697 | MS.gene015607:intron | 50.0% |
| !! | TTCTGGTTTGGGTTGGGGTT+CGG | + | chr4.1:1138796-1138815 | MS.gene015607:intron | 50.0% |
| !!! | GGAGATGGGCTGAGATTTTC+CGG | - | chr4.1:1137949-1137968 | None:intergenic | 50.0% |
| AATGGACATGCCACCAGCAG+TGG | - | chr4.1:1136774-1136793 | None:intergenic | 55.0% | |
| ACCAGGCCCTCCTAATGCTT+GGG | + | chr4.1:1139460-1139479 | MS.gene015607:CDS | 55.0% | |
| ACTAAGGCAGAACTTGGCCG+TGG | - | chr4.1:1138107-1138126 | None:intergenic | 55.0% | |
| AGCGCGTTGCTTCAAAGGTG+TGG | + | chr4.1:1136651-1136670 | MS.gene015607:CDS | 55.0% | |
| ATCTAGAGAAATCCGCCGGC+CGG | + | chr4.1:1137927-1137946 | MS.gene015607:intron | 55.0% | |
| CATTGGTCGAATTGGGCCCA+CGG | - | chr4.1:1139269-1139288 | None:intergenic | 55.0% | |
| CCACCTGCAAATGGGGTTGA+TGG | - | chr4.1:1139202-1139221 | None:intergenic | 55.0% | |
| CCATCAACCCCATTTGCAGG+TGG | + | chr4.1:1139199-1139218 | MS.gene015607:CDS | 55.0% | |
| CCATTCAGGTGGGAGGCAAA+AGG | - | chr4.1:1140712-1140731 | None:intergenic | 55.0% | |
| CTCTGCGAAAGAAGCTGACC+TGG | - | chr4.1:1141093-1141112 | None:intergenic | 55.0% | |
| CTGATGTGGAGGCCTTCTCA+CGG | - | chr4.1:1138209-1138228 | None:intergenic | 55.0% | |
| GACATGGGTGCAGCGGAAAA+TGG | - | chr4.1:1139737-1139756 | None:intergenic | 55.0% | |
| GGAGGATATCCGGTACCCAT+AGG | - | chr4.1:1139238-1139257 | None:intergenic | 55.0% | |
| GGAGGCCTCACATTCTGAAC+AGG | - | chr4.1:1139578-1139597 | None:intergenic | 55.0% | |
| GGAGTTAGGGGGTGGACAAA+TGG | + | chr4.1:1137881-1137900 | MS.gene015607:intron | 55.0% | |
| GGATATCCGGTACCCATAGG+AGG | - | chr4.1:1139235-1139254 | None:intergenic | 55.0% | |
| GGATGACGAGGCAATGTCCA+TGG | + | chr4.1:1140139-1140158 | MS.gene015607:CDS | 55.0% | |
| GGCACCATTCCACCTGCAAA+TGG | - | chr4.1:1139211-1139230 | None:intergenic | 55.0% | |
| GGTGTAGATGAAGGCAGTCC+AGG | - | chr4.1:1139647-1139666 | None:intergenic | 55.0% | |
| GTAGATGAAGGCAGTCCAGG+AGG | - | chr4.1:1139644-1139663 | None:intergenic | 55.0% | |
| GTTAGTGGCAGGCTGAGTAG+CGG | - | chr4.1:1140102-1140121 | None:intergenic | 55.0% | |
| TACCAGGCCCTCCTAATGCT+TGG | + | chr4.1:1139459-1139478 | MS.gene015607:CDS | 55.0% | |
| TATCCGGTACCCATAGGAGG+TGG | - | chr4.1:1139232-1139251 | None:intergenic | 55.0% | |
| TGAGCAGCCAAGACATCTGG+CGG | - | chr4.1:1137563-1137582 | None:intergenic | 55.0% | |
| TTAGTGGCAGGCTGAGTAGC+GGG | - | chr4.1:1140101-1140120 | None:intergenic | 55.0% | |
| TTGCCTCGTCATCCCAAACC+AGG | - | chr4.1:1140133-1140152 | None:intergenic | 55.0% | |
| ! | AGGGTGCCAAATGCGAAACC+TGG | + | chr4.1:1137494-1137513 | MS.gene015607:intron | 55.0% |
| ! | CCTTTTGCCTCCCACCTGAA+TGG | + | chr4.1:1140709-1140728 | MS.gene015607:intron | 55.0% |
| ! | CGGCGGATTTCTCTAGATGG+TGG | - | chr4.1:1137925-1137944 | None:intergenic | 55.0% |
| ! | GGGACAGGAGGTGTAGATGA+AGG | - | chr4.1:1139656-1139675 | None:intergenic | 55.0% |
| ! | GGGTTCTAACGAAAGCGGGT+GGG | + | chr4.1:1138001-1138020 | MS.gene015607:intron | 55.0% |
| ! | TTCACGGATAGGTTGGGTGG+CGG | + | chr4.1:1137980-1137999 | MS.gene015607:intron | 55.0% |
| !! | ATGGGCTGAGATTTTCCGGC+CGG | - | chr4.1:1137945-1137964 | None:intergenic | 55.0% |
| !! | CGAAAGCGGGTGGGTTGAAA+TGG | + | chr4.1:1138010-1138029 | MS.gene015607:intron | 55.0% |
| !! | CTACCTGGTTTGGGATGACG+AGG | + | chr4.1:1140127-1140146 | MS.gene015607:CDS | 55.0% |
| !! | GGAATGGTGCCACCTCCTAT+GGG | + | chr4.1:1139220-1139239 | MS.gene015607:CDS | 55.0% |
| !! | GGTTGATGGGATGTCCACCT+TGG | - | chr4.1:1139188-1139207 | None:intergenic | 55.0% |
| !! | GTGGCGGGTTCTAACGAAAG+CGG | + | chr4.1:1137996-1138015 | MS.gene015607:intron | 55.0% |
| !! | TGCTGTGGGTATTGAACCGG+AGG | - | chr4.1:1139545-1139564 | None:intergenic | 55.0% |
| !! | TGGAATGGTGCCACCTCCTA+TGG | + | chr4.1:1139219-1139238 | MS.gene015607:CDS | 55.0% |
| !! | TGGCGGGTTCTAACGAAAGC+GGG | + | chr4.1:1137997-1138016 | MS.gene015607:intron | 55.0% |
| !! | TGTGGGTATTGAACCGGAGG+AGG | - | chr4.1:1139542-1139561 | None:intergenic | 55.0% |
| AACCATGGCTGAGGTCGAGG+TGG | - | chr4.1:1139494-1139513 | None:intergenic | 60.0% | |
| ATTGGGCCCACGGTTGATCG+TGG | - | chr4.1:1139259-1139278 | None:intergenic | 60.0% | |
| CCAGGCCCTCCTAATGCTTG+GGG | + | chr4.1:1139461-1139480 | MS.gene015607:CDS | 60.0% | |
| CGTGAGAAGGCCTCCACATC+AGG | + | chr4.1:1138207-1138226 | MS.gene015607:intron | 60.0% | |
| GCTTCTGGCCCAAATACCGG+TGG | + | chr4.1:1140035-1140054 | MS.gene015607:CDS | 60.0% | |
| GGAAACCATGGCTGAGGTCG+AGG | - | chr4.1:1139497-1139516 | None:intergenic | 60.0% | |
| GGAGGCCTTCTCACGGTTGA+AGG | - | chr4.1:1138202-1138221 | None:intergenic | 60.0% | |
| GGCTGTGAAACTGGGACAGG+AGG | - | chr4.1:1139668-1139687 | None:intergenic | 60.0% | |
| GGGGATTCCGCCAGATGTCT+TGG | + | chr4.1:1137553-1137572 | MS.gene015607:CDS | 60.0% | |
| GTGCCACCTCCTATGGGTAC+CGG | + | chr4.1:1139226-1139245 | MS.gene015607:CDS | 60.0% | |
| GTTGGAGGCTGGGGAAACCA+TGG | - | chr4.1:1139509-1139528 | None:intergenic | 60.0% | |
| TTAGGAGGGCCTGGTACAGC+AGG | - | chr4.1:1139455-1139474 | None:intergenic | 60.0% | |
| TTCCACCTCGACCTCAGCCA+TGG | + | chr4.1:1139489-1139508 | MS.gene015607:CDS | 60.0% | |
| ! | CGGGTTCTAACGAAAGCGGG+TGG | + | chr4.1:1138000-1138019 | MS.gene015607:intron | 60.0% |
| ! | GGCCGGCGGATTTCTCTAGA+TGG | - | chr4.1:1137928-1137947 | None:intergenic | 60.0% |
| ! | TCACGGATAGGTTGGGTGGC+GGG | + | chr4.1:1137981-1138000 | MS.gene015607:intron | 60.0% |
| ! | TGCAACTGTGTCGGCACCGA+CGG | - | chr4.1:1138079-1138098 | None:intergenic | 60.0% |
| CCCCAAGCATTAGGAGGGCC+TGG | - | chr4.1:1139464-1139483 | None:intergenic | 65.0% | |
| GGCTGGGGAAACCATGGCTG+AGG | - | chr4.1:1139503-1139522 | None:intergenic | 65.0% | |
| ! | GAGCAGGCTAGCTGGTCGCA+TGG | + | chr4.1:1141257-1141276 | MS.gene015607:CDS | 65.0% |
| ! | GGCTGAGATTTTCCGGCCGG+CGG | - | chr4.1:1137942-1137961 | None:intergenic | 65.0% |
| GGGCCCACGGTTGATCGTGG+AGG | - | chr4.1:1139256-1139275 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 1136635 | 1141287 | 1136635 | ID=MS.gene015607 |
| chr4.1 | mRNA | 1136635 | 1141287 | 1136635 | ID=MS.gene015607.t1;Parent=MS.gene015607 |
| chr4.1 | exon | 1136635 | 1136828 | 1136635 | ID=MS.gene015607.t1.exon1;Parent=MS.gene015607.t1 |
| chr4.1 | CDS | 1136635 | 1136828 | 1136635 | ID=cds.MS.gene015607.t1;Parent=MS.gene015607.t1 |
| chr4.1 | exon | 1137496 | 1137596 | 1137496 | ID=MS.gene015607.t1.exon2;Parent=MS.gene015607.t1 |
| chr4.1 | CDS | 1137496 | 1137596 | 1137496 | ID=cds.MS.gene015607.t1;Parent=MS.gene015607.t1 |
| chr4.1 | exon | 1139161 | 1139287 | 1139161 | ID=MS.gene015607.t1.exon3;Parent=MS.gene015607.t1 |
| chr4.1 | CDS | 1139161 | 1139287 | 1139161 | ID=cds.MS.gene015607.t1;Parent=MS.gene015607.t1 |
| chr4.1 | exon | 1139445 | 1139866 | 1139445 | ID=MS.gene015607.t1.exon4;Parent=MS.gene015607.t1 |
| chr4.1 | CDS | 1139445 | 1139866 | 1139445 | ID=cds.MS.gene015607.t1;Parent=MS.gene015607.t1 |
| chr4.1 | exon | 1140006 | 1140160 | 1140006 | ID=MS.gene015607.t1.exon5;Parent=MS.gene015607.t1 |
| chr4.1 | CDS | 1140006 | 1140160 | 1140006 | ID=cds.MS.gene015607.t1;Parent=MS.gene015607.t1 |
| chr4.1 | exon | 1140254 | 1140307 | 1140254 | ID=MS.gene015607.t1.exon6;Parent=MS.gene015607.t1 |
| chr4.1 | CDS | 1140254 | 1140307 | 1140254 | ID=cds.MS.gene015607.t1;Parent=MS.gene015607.t1 |
| chr4.1 | exon | 1141216 | 1141287 | 1141216 | ID=MS.gene015607.t1.exon7;Parent=MS.gene015607.t1 |
| chr4.1 | CDS | 1141216 | 1141287 | 1141216 | ID=cds.MS.gene015607.t1;Parent=MS.gene015607.t1 |
| Gene Sequence |
| Protein sequence |
