Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40528.t1 | XP_003610622.1 | 98.8 | 334 | 4 | 0 | 7 | 340 | 11 | 344 | 1.60E-195 | 691.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40528.t1 | Q9LJN8 | 84.7 | 340 | 52 | 0 | 1 | 340 | 1 | 340 | 2.9e-174 | 612.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40528.t1 | G7K0X2 | 98.8 | 334 | 4 | 0 | 7 | 340 | 11 | 344 | 1.1e-195 | 691.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052308 | MS.gene40528 | 0.815569 | 8.65E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene40528 | 0.811039 | 8.55E-51 | -1.69E-46 |
| MS.gene055308 | MS.gene40528 | 0.804527 | 2.07E-49 | -1.69E-46 |
| MS.gene05640 | MS.gene40528 | 0.835862 | 1.31E-56 | -1.69E-46 |
| MS.gene05652 | MS.gene40528 | 0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene057669 | MS.gene40528 | 0.806528 | 7.87E-50 | -1.69E-46 |
| MS.gene058128 | MS.gene40528 | 0.814772 | 1.30E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene40528 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene059616 | MS.gene40528 | 0.81657 | 5.17E-52 | -1.69E-46 |
| MS.gene06093 | MS.gene40528 | 0.80645 | 8.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40528 | MS.gene040178 | PPI |
| MS.gene95865 | MS.gene40528 | PPI |
| MS.gene92360 | MS.gene40528 | PPI |
| MS.gene40528 | MS.gene85897 | PPI |
| MS.gene024963 | MS.gene40528 | PPI |
| MS.gene015607 | MS.gene40528 | PPI |
| MS.gene53114 | MS.gene40528 | PPI |
| MS.gene065201 | MS.gene40528 | PPI |
| MS.gene55320 | MS.gene40528 | PPI |
| MS.gene62644 | MS.gene40528 | PPI |
| MS.gene90774 | MS.gene40528 | PPI |
| MS.gene048337 | MS.gene40528 | PPI |
| MS.gene046944 | MS.gene40528 | PPI |
| MS.gene40528 | MS.gene065201 | PPI |
| MS.gene008905 | MS.gene40528 | PPI |
| MS.gene066387 | MS.gene40528 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40528.t1 | MTR_5g005120 | 98.521 | 338 | 5 | 0 | 3 | 340 | 7 | 344 | 0.0 | 700 |
| MS.gene40528.t1 | MTR_5g043000 | 37.658 | 316 | 189 | 5 | 15 | 328 | 16 | 325 | 1.39e-67 | 215 |
| MS.gene40528.t1 | MTR_2g008410 | 34.226 | 336 | 197 | 7 | 11 | 333 | 20 | 344 | 1.18e-63 | 206 |
| MS.gene40528.t1 | MTR_8g068875 | 34.524 | 336 | 197 | 7 | 11 | 334 | 18 | 342 | 4.24e-63 | 204 |
| MS.gene40528.t1 | MTR_2g008410 | 33.036 | 336 | 183 | 9 | 11 | 333 | 20 | 326 | 1.72e-55 | 184 |
| MS.gene40528.t1 | MTR_2g008410 | 34.722 | 288 | 171 | 6 | 52 | 333 | 3 | 279 | 8.46e-54 | 178 |
| MS.gene40528.t1 | MTR_1g492860 | 32.628 | 331 | 200 | 7 | 11 | 329 | 16 | 335 | 1.52e-52 | 177 |
| MS.gene40528.t1 | MTR_2g008410 | 33.333 | 288 | 157 | 8 | 52 | 333 | 3 | 261 | 1.28e-45 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40528.t1 | AT3G19590 | 84.706 | 340 | 52 | 0 | 1 | 340 | 1 | 340 | 0.0 | 615 |
| MS.gene40528.t1 | AT1G49910 | 85.119 | 336 | 50 | 0 | 3 | 338 | 2 | 337 | 0.0 | 608 |
| MS.gene40528.t1 | AT1G80670 | 35.821 | 335 | 192 | 8 | 11 | 333 | 19 | 342 | 1.89e-65 | 210 |
| MS.gene40528.t1 | AT1G69400 | 36.334 | 311 | 191 | 4 | 11 | 320 | 7 | 311 | 3.58e-64 | 206 |
| MS.gene40528.t1 | AT1G69400 | 37.037 | 243 | 147 | 3 | 11 | 253 | 7 | 243 | 2.95e-46 | 158 |
Find 90 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCGGTAAGGAGGATATTT+TGG | 0.159397 | 5.2:-405287 | MS.gene40528:CDS |
| TTGGGAAGGGCTTTGGGTTT+TGG | 0.164675 | 5.2:+402058 | None:intergenic |
| TGCAGGATTGGGAAGGGCTT+TGG | 0.197252 | 5.2:+402051 | None:intergenic |
| GTGGAATGCCATGGCATTTA+CGG | 0.284148 | 5.2:+403512 | None:intergenic |
| TGCTTCCATGACGACTCTTC+TGG | 0.306220 | 5.2:-405432 | MS.gene40528:CDS |
| GCAGGATTGGGAAGGGCTTT+GGG | 0.318991 | 5.2:+402052 | None:intergenic |
| TACAGTTTACCTGTTCCATT+TGG | 0.330327 | 5.2:+404040 | None:intergenic |
| GAAGATTCCCTTCGTTGTTC+AGG | 0.332221 | 5.2:+404097 | None:intergenic |
| GTTTACTCTCTATCTCTTGT+TGG | 0.372907 | 5.2:-404187 | MS.gene40528:CDS |
| GTTCACACTGCGAACGTAGA+TGG | 0.372963 | 5.2:+402096 | None:intergenic |
| ATCATCTTCTCGTCTCCTCT+TGG | 0.379669 | 5.2:-405536 | MS.gene40528:CDS |
| TCCCAAAATATCCTCCTTAC+CGG | 0.391787 | 5.2:+405285 | None:intergenic |
| GTTGTGAATACTTACGGTTT+AGG | 0.392170 | 5.2:+402335 | None:intergenic |
| TGGAATGCCATGGCATTTAC+GGG | 0.398545 | 5.2:+403513 | None:intergenic |
| GATAGAGAGTAAACACGTTC+AGG | 0.399955 | 5.2:+404196 | None:intergenic |
| AGTGAATCACGCTGCAGGAT+TGG | 0.403543 | 5.2:+402039 | None:intergenic |
| CGTGAAGGAACTCACCTCTA+AGG | 0.414200 | 5.2:+405475 | None:intergenic |
| GTGAATCACGCTGCAGGATT+GGG | 0.415119 | 5.2:+402040 | None:intergenic |
| GCAACCGCTGATGTCCTTAG+AGG | 0.424329 | 5.2:-405489 | MS.gene40528:CDS |
| TGGGTAGCAGCGTACACATC+TGG | 0.426524 | 5.2:+404060 | None:intergenic |
| CGCTGCTACCCAAATGGAAC+AGG | 0.433713 | 5.2:-404049 | MS.gene40528:intron |
| TCTTGTCCACTTGCACCTCT+AGG | 0.434348 | 5.2:+404247 | None:intergenic |
| TGACCGTCTGACAGTGTTAT+CGG | 0.437288 | 5.2:+405395 | None:intergenic |
| GGGATAAAACCATAAAATGT+TGG | 0.442375 | 5.2:-404273 | MS.gene40528:CDS |
| GCAATTGATCACTGGAAGTT+GGG | 0.444451 | 5.2:-404293 | MS.gene40528:CDS |
| GGCAATTGATCACTGGAAGT+TGG | 0.450395 | 5.2:-404294 | MS.gene40528:CDS |
| GGATAAAACCATAAAATGTT+GGG | 0.457603 | 5.2:-404272 | MS.gene40528:CDS |
| TCATCTTCTCGTCTCCTCTT+GGG | 0.459429 | 5.2:-405535 | MS.gene40528:CDS |
| TGACCTATCTGAGGCTAGCC+AGG | 0.461002 | 5.2:-403704 | MS.gene40528:CDS |
| CTCTATCTCTTGTTGGACAT+CGG | 0.475750 | 5.2:-404180 | MS.gene40528:CDS |
| AAAATCAATACTTCTTTGCC+TGG | 0.480508 | 5.2:+403686 | None:intergenic |
| GGACAAGAGCGTACTCTAGT+TGG | 0.480881 | 5.2:-404232 | MS.gene40528:CDS |
| ACAGTTTACCTGTTCCATTT+GGG | 0.482139 | 5.2:+404041 | None:intergenic |
| TGTGTACGCTGCTACCCAAA+TGG | 0.483373 | 5.2:-404055 | MS.gene40528:CDS |
| CTTAGAGGTGAGTTCCTTCA+CGG | 0.487170 | 5.2:-405474 | MS.gene40528:CDS |
| GAGAGTGCAGCAATGCTACT+TGG | 0.487185 | 5.2:+402416 | None:intergenic |
| TGGAAGCAACAGTCAAGAAC+AGG | 0.493479 | 5.2:+405447 | None:intergenic |
| TTGCCTGGCTAGCCTCAGAT+AGG | 0.496802 | 5.2:+403701 | None:intergenic |
| ATGTTCGAGATTCCGTCTGA+TGG | 0.502489 | 5.2:+405579 | None:intergenic |
| GACAAGAGCGTACTCTAGTT+GGG | 0.502955 | 5.2:-404231 | MS.gene40528:CDS |
| CTTGTCCACTTGCACCTCTA+GGG | 0.505930 | 5.2:+404248 | None:intergenic |
| TCTCGACCGGCGGATACCAC+TGG | 0.514276 | 5.2:+405615 | None:intergenic |
| TGTTGAAGGGCGGGTTGCAA+TGG | 0.517015 | 5.2:-403734 | MS.gene40528:CDS |
| GAGTACTCAACACAACGAAC+AGG | 0.517820 | 5.2:+405250 | None:intergenic |
| TATGCTCTTAGTTCTGTTGA+AGG | 0.518025 | 5.2:-403748 | MS.gene40528:CDS |
| GAACCAGTGAATCACGCTGC+AGG | 0.520926 | 5.2:+402034 | None:intergenic |
| GCACTCTCGTTTAGCAGAGA+TGG | 0.522542 | 5.2:-402401 | MS.gene40528:CDS |
| TCTTAGTTCTGTTGAAGGGC+GGG | 0.525855 | 5.2:-403743 | MS.gene40528:CDS |
| TGTCATAGAAAATCTGAAGC+TGG | 0.530953 | 5.2:-403552 | MS.gene40528:CDS |
| TGCGAACGTAGATGGCATCT+TGG | 0.531617 | 5.2:+402104 | None:intergenic |
| CAAGAACAGGTCCGCCGTGA+AGG | 0.534963 | 5.2:+405460 | None:intergenic |
| TAGAAAATCTGAAGCTGGAA+GGG | 0.537950 | 5.2:-403547 | MS.gene40528:CDS |
| CGTAGATGGCATCTTGGTCA+TGG | 0.539971 | 5.2:+402110 | None:intergenic |
| CTCTTAGTTCTGTTGAAGGG+CGG | 0.540304 | 5.2:-403744 | MS.gene40528:CDS |
| GTTGAGTACTCCTACGCCGC+AGG | 0.544652 | 5.2:-405238 | MS.gene40528:intron |
| CTGAAAACACTTACATGGGG+TGG | 0.550167 | 5.2:+403493 | None:intergenic |
| CGGCTTGTAGTAGCAACAGC+TGG | 0.551056 | 5.2:-404160 | MS.gene40528:CDS |
| ATAGAAAATCTGAAGCTGGA+AGG | 0.551824 | 5.2:-403548 | MS.gene40528:CDS |
| ATTATAGGGCAATTGATCAC+TGG | 0.555294 | 5.2:-404301 | MS.gene40528:intron |
| TTCGAGATTCCGTCTGATGG+AGG | 0.561551 | 5.2:+405582 | None:intergenic |
| TCGAGATTCCGTCTGATGGA+GGG | 0.571433 | 5.2:+405583 | None:intergenic |
| AAGTAAGTAACCTGCGGCGT+AGG | 0.571654 | 5.2:+405228 | None:intergenic |
| AGGGTTTGTTAACTCTCGAC+CGG | 0.575778 | 5.2:+405602 | None:intergenic |
| ATGCTCTTAGTTCTGTTGAA+GGG | 0.579584 | 5.2:-403747 | MS.gene40528:CDS |
| ATCACGCTGCAGGATTGGGA+AGG | 0.587120 | 5.2:+402044 | None:intergenic |
| CGTCTATCCCGTAAATGCCA+TGG | 0.598810 | 5.2:-403520 | MS.gene40528:CDS |
| TGTAACTTGATGCAACAGCT+AGG | 0.599050 | 5.2:+402372 | None:intergenic |
| GTCTTGTCCTGAACAACGAA+GGG | 0.604426 | 5.2:-404104 | MS.gene40528:CDS |
| ACGTTAATGTTTATGACATG+AGG | 0.606508 | 5.2:-404132 | MS.gene40528:CDS |
| TGAAACCAGAAGAGTCGTCA+TGG | 0.608860 | 5.2:+405427 | None:intergenic |
| GGAATTCTTTGACCTATCTG+AGG | 0.609008 | 5.2:-403713 | MS.gene40528:CDS |
| TCACGCTGCAGGATTGGGAA+GGG | 0.611093 | 5.2:+402045 | None:intergenic |
| AGATATGGTACATTTGCCAC+AGG | 0.618381 | 5.2:-402599 | MS.gene40528:CDS |
| TTACATGGGGTGGAATGCCA+TGG | 0.620444 | 5.2:+403503 | None:intergenic |
| TTTGCCACAGGAGGTTGTGA+CGG | 0.624438 | 5.2:-402587 | MS.gene40528:CDS |
| TGTCTTGTCCTGAACAACGA+AGG | 0.627385 | 5.2:-404105 | MS.gene40528:CDS |
| TATGGTACATTTGCCACAGG+AGG | 0.632539 | 5.2:-402596 | MS.gene40528:CDS |
| GCAACACCAGTGGTATCCGC+CGG | 0.635006 | 5.2:-405621 | MS.gene40528:CDS |
| TGGGACCCTAGAGGTGCAAG+TGG | 0.639134 | 5.2:-404253 | MS.gene40528:CDS |
| TTAACAAACCCTCCATCAGA+CGG | 0.649038 | 5.2:-405591 | MS.gene40528:CDS |
| AAAACCGTCACAACCTCCTG+TGG | 0.649987 | 5.2:+402583 | None:intergenic |
| GTTTGTTAACTCTCGACCGG+CGG | 0.651310 | 5.2:+405605 | None:intergenic |
| CTCAACAATGGCAACACCAG+TGG | 0.659385 | 5.2:-405631 | None:intergenic |
| AACTTGATGCAACAGCTAGG+AGG | 0.684112 | 5.2:+402375 | None:intergenic |
| CCGCCGATAACACTGTCAGA+CGG | 0.721323 | 5.2:-405398 | MS.gene40528:intron |
| CCGTCTGACAGTGTTATCGG+CGG | 0.724491 | 5.2:+405398 | None:intergenic |
| AGAGGTGAGTTCCTTCACGG+CGG | 0.725492 | 5.2:-405471 | MS.gene40528:CDS |
| ATAAAATGTTGGGACCCTAG+AGG | 0.729323 | 5.2:-404262 | MS.gene40528:CDS |
| CTCACCTCTAAGGACATCAG+CGG | 0.748654 | 5.2:+405485 | None:intergenic |
| AGACGAGAAGATGATCACTG+TGG | 0.796510 | 5.2:+405544 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAATTTAAAACAAATTG+TGG | - | chr5.2:404254-404273 | MS.gene40528:CDS | 10.0% |
| !!! | TTTTTTTTTTAAAAAACTTG+GGG | - | chr5.2:402783-402802 | MS.gene40528:intron | 10.0% |
| !! | ACTAATAAATTAGTGATAAT+TGG | + | chr5.2:404966-404985 | None:intergenic | 15.0% |
| !! | CTAATAAATTAGTGATAATT+GGG | + | chr5.2:404965-404984 | None:intergenic | 15.0% |
| !! | TAAGGAATCTTATTAATAAA+AGG | - | chr5.2:404840-404859 | MS.gene40528:intron | 15.0% |
| !! | TCTAAATTAACACATATAAT+TGG | + | chr5.2:402506-402525 | None:intergenic | 15.0% |
| !! | TTTGTAAGGAATAATAATTA+AGG | - | chr5.2:403077-403096 | MS.gene40528:intron | 15.0% |
| !!! | TATTTGGTTTAGAAATTAAA+TGG | - | chr5.2:404445-404464 | MS.gene40528:intron | 15.0% |
| !! | AATAAGATTCCTTATATTCA+AGG | + | chr5.2:404834-404853 | None:intergenic | 20.0% |
| !! | AATCAGAAAATATATACTAG+TGG | + | chr5.2:402642-402661 | None:intergenic | 20.0% |
| !! | AGTTACAAAGAAAATTCAAA+TGG | - | chr5.2:402950-402969 | MS.gene40528:intron | 20.0% |
| !! | ATATTATTATTTCCGTTCAA+AGG | - | chr5.2:403246-403265 | MS.gene40528:intron | 20.0% |
| !! | GTTACAAAGAAAATTCAAAT+GGG | - | chr5.2:402951-402970 | MS.gene40528:intron | 20.0% |
| !! | TTAACTTATCCATCATTATA+GGG | - | chr5.2:403354-403373 | MS.gene40528:intron | 20.0% |
| !! | TTATCAATAACATGTATGAA+AGG | + | chr5.2:404418-404437 | None:intergenic | 20.0% |
| !!! | AAAAAACAACAATTTTGAAG+TGG | + | chr5.2:404032-404051 | None:intergenic | 20.0% |
| !!! | TATTGATAATCATGACTATT+TGG | - | chr5.2:404429-404448 | MS.gene40528:intron | 20.0% |
| !!! | TTTAACTTATCCATCATTAT+AGG | - | chr5.2:403353-403372 | MS.gene40528:intron | 20.0% |
| ! | AAATTAAATGGTTGCAAGTT+GGG | - | chr5.2:404457-404476 | MS.gene40528:intron | 25.0% |
| ! | AATTTGCAAAACTTATGGTT+TGG | - | chr5.2:403673-403692 | MS.gene40528:intron | 25.0% |
| ! | ACTAACAATGACAATAACAA+TGG | + | chr5.2:402328-402347 | None:intergenic | 25.0% |
| ! | GGATAAAACCATAAAATGTT+GGG | - | chr5.2:403397-403416 | MS.gene40528:intron | 25.0% |
| ! | TAATTCTAACCATCCAATTT+CGG | + | chr5.2:404714-404733 | None:intergenic | 25.0% |
| ! | TAGAAAGAACAATGTATTCA+AGG | + | chr5.2:404875-404894 | None:intergenic | 25.0% |
| ! | TTAGCAGTTTGAAAGAAAAA+AGG | + | chr5.2:402483-402502 | None:intergenic | 25.0% |
| !! | GGAATAATTTGCAAAACTTA+TGG | - | chr5.2:403668-403687 | MS.gene40528:intron | 25.0% |
| !! | TGAGTTTTCAGTGTTAAAAA+GGG | + | chr5.2:402728-402747 | None:intergenic | 25.0% |
| !! | TTGAAATTTTCATCAAATGC+TGG | - | chr5.2:403722-403741 | MS.gene40528:CDS | 25.0% |
| !! | TTGAGTTTTCAGTGTTAAAA+AGG | + | chr5.2:402729-402748 | None:intergenic | 25.0% |
| !!! | AAAACAAATTGTGGTTTTAG+TGG | - | chr5.2:404263-404282 | MS.gene40528:CDS | 25.0% |
| !!! | GATATTTTGAATACTGCAAA+AGG | + | chr5.2:405234-405253 | None:intergenic | 25.0% |
| !!! | TTTTTAAAAAACTTGGGGAA+GGG | - | chr5.2:402788-402807 | MS.gene40528:intron | 25.0% |
| !!! | TTTTTTAAAAAACTTGGGGA+AGG | - | chr5.2:402787-402806 | MS.gene40528:intron | 25.0% |
| AAAACCTGAAAACACTTACA+TGG | + | chr5.2:404184-404203 | None:intergenic | 30.0% | |
| AAAATCAATACTTCTTTGCC+TGG | + | chr5.2:403986-404005 | None:intergenic | 30.0% | |
| AAACCTGAAAACACTTACAT+GGG | + | chr5.2:404183-404202 | None:intergenic | 30.0% | |
| AAATCGACTAGAAAATGACT+AGG | - | chr5.2:404546-404565 | MS.gene40528:intron | 30.0% | |
| AATGACAATAACAATGGATC+TGG | + | chr5.2:402322-402341 | None:intergenic | 30.0% | |
| AATTATCAGTGTCCATTCTT+TGG | + | chr5.2:404330-404349 | None:intergenic | 30.0% | |
| ACCAAATATGTTATCATCGT+TGG | + | chr5.2:403181-403200 | None:intergenic | 30.0% | |
| ACCAACGATGATAACATATT+TGG | - | chr5.2:403177-403196 | MS.gene40528:intron | 30.0% | |
| ACGTTAATGTTTATGACATG+AGG | - | chr5.2:403537-403556 | MS.gene40528:CDS | 30.0% | |
| ATAAGTAAGTAAGTAACCTG+CGG | + | chr5.2:402450-402469 | None:intergenic | 30.0% | |
| ATCAGCTATTTATGTTCTCT+GGG | - | chr5.2:404303-404322 | MS.gene40528:intron | 30.0% | |
| ATTAACAACAGATTAGAGAG+AGG | + | chr5.2:405528-405547 | None:intergenic | 30.0% | |
| CAATTAATGGTTTCCGAAAT+TGG | - | chr5.2:404698-404717 | MS.gene40528:intron | 30.0% | |
| CATGGGGATATTACAATTAA+TGG | - | chr5.2:404685-404704 | MS.gene40528:intron | 30.0% | |
| GAAAAATCTTCATGCAGATA+TGG | - | chr5.2:405055-405074 | MS.gene40528:intron | 30.0% | |
| GAAATTAAATGGTTGCAAGT+TGG | - | chr5.2:404456-404475 | MS.gene40528:intron | 30.0% | |
| GAAGTTTGACTATTGACAAT+GGG | - | chr5.2:403324-403343 | MS.gene40528:intron | 30.0% | |
| GAATACTGCAAAAGGATAAA+TGG | + | chr5.2:405226-405245 | None:intergenic | 30.0% | |
| GAATGATACAAATCCTAGAA+TGG | + | chr5.2:404649-404668 | None:intergenic | 30.0% | |
| GGGATAAAACCATAAAATGT+TGG | - | chr5.2:403396-403415 | MS.gene40528:intron | 30.0% | |
| TAGAGATCAGATTCTTCTTA+TGG | - | chr5.2:405178-405197 | MS.gene40528:intron | 30.0% | |
| TATCAGCTATTTATGTTCTC+TGG | - | chr5.2:404302-404321 | MS.gene40528:intron | 30.0% | |
| TATTACATTGTTGTACGAGT+GGG | + | chr5.2:404753-404772 | None:intergenic | 30.0% | |
| TCGTACAACAATGTAATAGT+TGG | - | chr5.2:404755-404774 | MS.gene40528:intron | 30.0% | |
| TGCTAAACACCTTGAATATA+AGG | - | chr5.2:404822-404841 | MS.gene40528:intron | 30.0% | |
| TTAACAACAGATTAGAGAGA+GGG | + | chr5.2:405527-405546 | None:intergenic | 30.0% | |
| TTTAGCATGCTAGTGAATTA+AGG | + | chr5.2:404229-404248 | None:intergenic | 30.0% | |
| ! | AAAATCAGTTTTCGCTAATC+TGG | + | chr5.2:402919-402938 | None:intergenic | 30.0% |
| ! | AGTTAGTTGTGATTGATAGT+TGG | + | chr5.2:404930-404949 | None:intergenic | 30.0% |
| ! | ATATCCTGCAAAAAGTATGT+GGG | + | chr5.2:403904-403923 | None:intergenic | 30.0% |
| ! | GCACTATTATTGATTGAAAG+AGG | - | chr5.2:403791-403810 | MS.gene40528:intron | 30.0% |
| !! | ATCAAGTTACACTTTTGAAG+AGG | - | chr5.2:405309-405328 | MS.gene40528:intron | 30.0% |
| !! | GTCATTTTCTAGTCGATTTT+TGG | + | chr5.2:404545-404564 | None:intergenic | 30.0% |
| !! | TCAAGTTACACTTTTGAAGA+GGG | - | chr5.2:405310-405329 | MS.gene40528:intron | 30.0% |
| !! | TTGACTTGTAAGTAACTTCA+AGG | + | chr5.2:402886-402905 | None:intergenic | 30.0% |
| !! | TTTTAAAAAACTTGGGGAAG+GGG | - | chr5.2:402789-402808 | MS.gene40528:intron | 30.0% |
| !!! | GGTTTTAAACTTGATTCTCA+AGG | + | chr5.2:403160-403179 | None:intergenic | 30.0% |
| AACCTGAAAACACTTACATG+GGG | + | chr5.2:404182-404201 | None:intergenic | 35.0% | |
| AAGAATTGCAGCTTATTTGC+TGG | - | chr5.2:403302-403321 | MS.gene40528:intron | 35.0% | |
| AATAGAGTTCAAATCTCCAC+GGG | + | chr5.2:402863-402882 | None:intergenic | 35.0% | |
| ACAGTTTACCTGTTCCATTT+GGG | + | chr5.2:403631-403650 | None:intergenic | 35.0% | |
| AGAATGATGACTCCTTTGAA+CGG | + | chr5.2:403261-403280 | None:intergenic | 35.0% | |
| AGCAGTATCAACATACTAAC+TGG | - | chr5.2:404986-405005 | MS.gene40528:intron | 35.0% | |
| AGCTAGAAACTGCAATGAAT+AGG | + | chr5.2:402702-402721 | None:intergenic | 35.0% | |
| ATGGGAGTTGTGAATACTTA+CGG | + | chr5.2:405343-405362 | None:intergenic | 35.0% | |
| ATTATAGGGCAATTGATCAC+TGG | - | chr5.2:403368-403387 | MS.gene40528:intron | 35.0% | |
| ATTCACTAGCATGCTAAAGA+AGG | - | chr5.2:404231-404250 | MS.gene40528:CDS | 35.0% | |
| CAATAACAATGGATCTGGAA+AGG | + | chr5.2:402317-402336 | None:intergenic | 35.0% | |
| CATCCTAACTGAATGTTGAT+AGG | - | chr5.2:404492-404511 | MS.gene40528:intron | 35.0% | |
| CTATTACATTGTTGTACGAG+TGG | + | chr5.2:404754-404773 | None:intergenic | 35.0% | |
| CTCGTGTGATATTCTTTGTA+AGG | - | chr5.2:403063-403082 | MS.gene40528:intron | 35.0% | |
| CTGATCTCTAAATTTACTCG+AGG | + | chr5.2:405168-405187 | None:intergenic | 35.0% | |
| CTTACAAAGAATATCACACG+AGG | + | chr5.2:403065-403084 | None:intergenic | 35.0% | |
| GAATAGAGTTCAAATCTCCA+CGG | + | chr5.2:402864-402883 | None:intergenic | 35.0% | |
| GACACTGATAATTACCACAA+TGG | - | chr5.2:404337-404356 | MS.gene40528:intron | 35.0% | |
| GATCAATTGCCCTATAATGA+TGG | + | chr5.2:403366-403385 | None:intergenic | 35.0% | |
| GATCCTATCAACATTCAGTT+AGG | + | chr5.2:404498-404517 | None:intergenic | 35.0% | |
| GGAAGTTTGACTATTGACAA+TGG | - | chr5.2:403323-403342 | MS.gene40528:intron | 35.0% | |
| GGAGATATTACGAATGTCAT+TGG | - | chr5.2:404567-404586 | MS.gene40528:intron | 35.0% | |
| GGTGTAATAAGAACCAATCT+GGG | - | chr5.2:404776-404795 | MS.gene40528:intron | 35.0% | |
| GTAGAGTTTAGAAGCAAATG+AGG | + | chr5.2:404080-404099 | None:intergenic | 35.0% | |
| GTGTAATAAGAACCAATCTG+GGG | - | chr5.2:404777-404796 | MS.gene40528:intron | 35.0% | |
| GTTGTGAATACTTACGGTTT+AGG | + | chr5.2:405337-405356 | None:intergenic | 35.0% | |
| GTTTACTCTCTATCTCTTGT+TGG | - | chr5.2:403482-403501 | MS.gene40528:intron | 35.0% | |
| TAATATCCCCATGTCATCTT+TGG | + | chr5.2:404678-404697 | None:intergenic | 35.0% | |
| TAATGGTTTCCGAAATTGGA+TGG | - | chr5.2:404702-404721 | MS.gene40528:intron | 35.0% | |
| TACAGTTTACCTGTTCCATT+TGG | + | chr5.2:403632-403651 | None:intergenic | 35.0% | |
| TATGTGGGATATGAACATCA+AGG | + | chr5.2:403889-403908 | None:intergenic | 35.0% | |
| TGCAATTCTTGTCATTGTCA+CGG | + | chr5.2:403292-403311 | None:intergenic | 35.0% | |
| TGGTGTAATAAGAACCAATC+TGG | - | chr5.2:404775-404794 | MS.gene40528:intron | 35.0% | |
| TGTAATAAGAACCAATCTGG+GGG | - | chr5.2:404778-404797 | MS.gene40528:intron | 35.0% | |
| TTTGCTTCTAAACTCTACAC+AGG | - | chr5.2:404082-404101 | MS.gene40528:CDS | 35.0% | |
| ! | ATAGAAAATCTGAAGCTGGA+AGG | - | chr5.2:404121-404140 | MS.gene40528:CDS | 35.0% |
| ! | CATATCCTGCAAAAAGTATG+TGG | + | chr5.2:403905-403924 | None:intergenic | 35.0% |
| ! | CTGTAGTGTATGTGTGATTT+TGG | - | chr5.2:403647-403666 | MS.gene40528:intron | 35.0% |
| ! | GATATGTTTTACCAAGACAG+CGG | + | chr5.2:402572-402591 | None:intergenic | 35.0% |
| ! | TAGAAAATCTGAAGCTGGAA+GGG | - | chr5.2:404122-404141 | MS.gene40528:CDS | 35.0% |
| ! | TGATTCTCAAGGCACATTTT+AGG | + | chr5.2:403149-403168 | None:intergenic | 35.0% |
| ! | TGTCATAGAAAATCTGAAGC+TGG | - | chr5.2:404117-404136 | MS.gene40528:CDS | 35.0% |
| !! | AATCCTAGAATGGTACTGAT+AGG | + | chr5.2:404639-404658 | None:intergenic | 35.0% |
| !! | ATATCCCACATACTTTTTGC+AGG | - | chr5.2:403897-403916 | MS.gene40528:intron | 35.0% |
| !! | ATGCTCTTAGTTCTGTTGAA+GGG | - | chr5.2:403922-403941 | MS.gene40528:intron | 35.0% |
| !! | GTTGAGTTTCTTAGCTTTGA+TGG | - | chr5.2:403836-403855 | MS.gene40528:intron | 35.0% |
| !! | TATGCTCTTAGTTCTGTTGA+AGG | - | chr5.2:403921-403940 | MS.gene40528:intron | 35.0% |
| !!! | TGACGGTTTTGTTAACGTAT+GGG | - | chr5.2:405099-405118 | MS.gene40528:intron | 35.0% |
| AGAACACCAAAGATGACATG+GGG | - | chr5.2:404669-404688 | MS.gene40528:intron | 40.0% | |
| AGATATGGTACATTTGCCAC+AGG | - | chr5.2:405070-405089 | MS.gene40528:intron | 40.0% | |
| ATAAAATGTTGGGACCCTAG+AGG | - | chr5.2:403407-403426 | MS.gene40528:intron | 40.0% | |
| CAACAAAAAGAGGCTATACC+AGG | - | chr5.2:405129-405148 | MS.gene40528:intron | 40.0% | |
| CAGAACACCAAAGATGACAT+GGG | - | chr5.2:404668-404687 | MS.gene40528:intron | 40.0% | |
| CTCTATCTCTTGTTGGACAT+CGG | - | chr5.2:403489-403508 | MS.gene40528:intron | 40.0% | |
| GATACAATATACCGCTGTCT+TGG | - | chr5.2:402558-402577 | MS.gene40528:CDS | 40.0% | |
| GATAGAGAGTAAACACGTTC+AGG | + | chr5.2:403476-403495 | None:intergenic | 40.0% | |
| GCAATTGATCACTGGAAGTT+GGG | - | chr5.2:403376-403395 | MS.gene40528:intron | 40.0% | |
| GGAATTCTTTGACCTATCTG+AGG | - | chr5.2:403956-403975 | MS.gene40528:intron | 40.0% | |
| GTCAGGAAACGATAATCTCT+TGG | - | chr5.2:404365-404384 | MS.gene40528:intron | 40.0% | |
| TCAGAACACCAAAGATGACA+TGG | - | chr5.2:404667-404686 | MS.gene40528:intron | 40.0% | |
| TCATTTAACAACTGTTCCCG+TGG | - | chr5.2:402844-402863 | MS.gene40528:intron | 40.0% | |
| TCCCAAAATATCCTCCTTAC+CGG | + | chr5.2:402387-402406 | None:intergenic | 40.0% | |
| TCTCCTATCAGTACCATTCT+AGG | - | chr5.2:404633-404652 | MS.gene40528:intron | 40.0% | |
| TGTAACTTGATGCAACAGCT+AGG | + | chr5.2:405300-405319 | None:intergenic | 40.0% | |
| TTAACAAACCCTCCATCAGA+CGG | - | chr5.2:402078-402097 | MS.gene40528:CDS | 40.0% | |
| ! | AAATGGTTGCAAGTTGGGAA+AGG | - | chr5.2:404462-404481 | MS.gene40528:intron | 40.0% |
| ! | ACCGGTAAGGAGGATATTTT+GGG | - | chr5.2:402383-402402 | MS.gene40528:CDS | 40.0% |
| ! | TACCGGTAAGGAGGATATTT+TGG | - | chr5.2:402382-402401 | MS.gene40528:CDS | 40.0% |
| !! | ACGAACAGTTTTATCCCAAG+AGG | + | chr5.2:402151-402170 | None:intergenic | 40.0% |
| !! | AGTGATAATTGGGTTAGCAG+CGG | + | chr5.2:404955-404974 | None:intergenic | 40.0% |
| !! | TCTAGGGTCCCAACATTTTA+TGG | + | chr5.2:403408-403427 | None:intergenic | 40.0% |
| !! | TGTAGCCTCATTTTTGCTAC+CGG | - | chr5.2:402365-402384 | MS.gene40528:CDS | 40.0% |
| !!! | GGTTTTGTTAACGTATGGGA+CGG | - | chr5.2:405103-405122 | MS.gene40528:intron | 40.0% |
| !!! | GTGACGGTTTTGTTAACGTA+TGG | - | chr5.2:405098-405117 | MS.gene40528:intron | 40.0% |
| AACTTGATGCAACAGCTAGG+AGG | + | chr5.2:405297-405316 | None:intergenic | 45.0% | |
| ACAACAGATTAGAGAGAGGG+AGG | + | chr5.2:405524-405543 | None:intergenic | 45.0% | |
| AGACGAGAAGATGATCACTG+TGG | + | chr5.2:402128-402147 | None:intergenic | 45.0% | |
| AGCGTGTGTGTGGAGAAAAT+GGG | + | chr5.2:405361-405380 | None:intergenic | 45.0% | |
| ATCATCTTCTCGTCTCCTCT+TGG | - | chr5.2:402133-402152 | MS.gene40528:intron | 45.0% | |
| ATGTTCGAGATTCCGTCTGA+TGG | + | chr5.2:402093-402112 | None:intergenic | 45.0% | |
| CAACAGATTAGAGAGAGGGA+GGG | + | chr5.2:405523-405542 | None:intergenic | 45.0% | |
| CACGCATGTGCAAACAAGTA+TGG | + | chr5.2:402594-402613 | None:intergenic | 45.0% | |
| CCTTACCGGTAGCAAAAATG+AGG | + | chr5.2:402373-402392 | None:intergenic | 45.0% | |
| CGAGGCAAATGAGAAAAACC+TGG | + | chr5.2:405150-405169 | None:intergenic | 45.0% | |
| CTGAAAACACTTACATGGGG+TGG | + | chr5.2:404179-404198 | None:intergenic | 45.0% | |
| CTTAGAGGTGAGTTCCTTCA+CGG | - | chr5.2:402195-402214 | MS.gene40528:intron | 45.0% | |
| GAAGATTCCCTTCGTTGTTC+AGG | + | chr5.2:403575-403594 | None:intergenic | 45.0% | |
| GAGTACTCAACACAACGAAC+AGG | + | chr5.2:402422-402441 | None:intergenic | 45.0% | |
| GGCAATTGATCACTGGAAGT+TGG | - | chr5.2:403375-403394 | MS.gene40528:intron | 45.0% | |
| GGGACGGAAACAACAAAAAG+AGG | - | chr5.2:405119-405138 | MS.gene40528:intron | 45.0% | |
| GTCTTGTCCTGAACAACGAA+GGG | - | chr5.2:403565-403584 | MS.gene40528:CDS | 45.0% | |
| GTGGAATGCCATGGCATTTA+CGG | + | chr5.2:404160-404179 | None:intergenic | 45.0% | |
| TATGGTACATTTGCCACAGG+AGG | - | chr5.2:405073-405092 | MS.gene40528:intron | 45.0% | |
| TCATCTTCTCGTCTCCTCTT+GGG | - | chr5.2:402134-402153 | MS.gene40528:intron | 45.0% | |
| TGAAACCAGAAGAGTCGTCA+TGG | + | chr5.2:402245-402264 | None:intergenic | 45.0% | |
| TGACCGTCTGACAGTGTTAT+CGG | + | chr5.2:402277-402296 | None:intergenic | 45.0% | |
| TGGAAGCAACAGTCAAGAAC+AGG | + | chr5.2:402225-402244 | None:intergenic | 45.0% | |
| TGGAATGCCATGGCATTTAC+GGG | + | chr5.2:404159-404178 | None:intergenic | 45.0% | |
| TGTCTTGTCCTGAACAACGA+AGG | - | chr5.2:403564-403583 | MS.gene40528:CDS | 45.0% | |
| TGTTCTCTGGGTCCAAAGAA+TGG | - | chr5.2:404315-404334 | MS.gene40528:intron | 45.0% | |
| TTACCACAATGGCTTGAGTC+AGG | - | chr5.2:404348-404367 | MS.gene40528:intron | 45.0% | |
| TTTCCTGACTCAAGCCATTG+TGG | + | chr5.2:404354-404373 | None:intergenic | 45.0% | |
| ! | CACCCCATGTAAGTGTTTTC+AGG | - | chr5.2:404177-404196 | MS.gene40528:CDS | 45.0% |
| ! | CATTTTTGCTACCGGTAAGG+AGG | - | chr5.2:402373-402392 | MS.gene40528:CDS | 45.0% |
| ! | GACAAGAGCGTACTCTAGTT+GGG | - | chr5.2:403438-403457 | MS.gene40528:intron | 45.0% |
| !! | AGGGTTTGTTAACTCTCGAC+CGG | + | chr5.2:402070-402089 | None:intergenic | 45.0% |
| !! | CCTCATTTTTGCTACCGGTA+AGG | - | chr5.2:402370-402389 | MS.gene40528:CDS | 45.0% |
| !! | CTCTTAGTTCTGTTGAAGGG+CGG | - | chr5.2:403925-403944 | MS.gene40528:intron | 45.0% |
| !! | TCTTAGTTCTGTTGAAGGGC+GGG | - | chr5.2:403926-403945 | MS.gene40528:intron | 45.0% |
| !!! | TTTTTTTTTTTAAAAAACTT+GGG | - | chr5.2:402782-402801 | MS.gene40528:intron | 5.0% |
| !!! | TTTTTTTTTTTTAAAAAACT+TGG | - | chr5.2:402781-402800 | MS.gene40528:intron | 5.0% |
| AAAACCGTCACAACCTCCTG+TGG | + | chr5.2:405089-405108 | None:intergenic | 50.0% | |
| AAGTAAGTAACCTGCGGCGT+AGG | + | chr5.2:402444-402463 | None:intergenic | 50.0% | |
| AGATTAGAGAGAGGGAGGGA+GGG | + | chr5.2:405519-405538 | None:intergenic | 50.0% | |
| CGAGGCAATGCAAAACTGAC+TGG | + | chr5.2:403047-403066 | None:intergenic | 50.0% | |
| CGTAGATGGCATCTTGGTCA+TGG | + | chr5.2:405562-405581 | None:intergenic | 50.0% | |
| CGTCTATCCCGTAAATGCCA+TGG | - | chr5.2:404149-404168 | MS.gene40528:CDS | 50.0% | |
| CGTGAAGGAACTCACCTCTA+AGG | + | chr5.2:402197-402216 | None:intergenic | 50.0% | |
| CTTGTCCACTTGCACCTCTA+GGG | + | chr5.2:403424-403443 | None:intergenic | 50.0% | |
| GAGCGTGTGTGTGGAGAAAA+TGG | + | chr5.2:405362-405381 | None:intergenic | 50.0% | |
| GCACTCTCGTTTAGCAGAGA+TGG | - | chr5.2:405268-405287 | MS.gene40528:CDS | 50.0% | |
| GGACGAGGAAAGATGTGCAA+AGG | - | chr5.2:404799-404818 | MS.gene40528:intron | 50.0% | |
| GTTCACACTGCGAACGTAGA+TGG | + | chr5.2:405576-405595 | None:intergenic | 50.0% | |
| TCGAGATTCCGTCTGATGGA+GGG | + | chr5.2:402089-402108 | None:intergenic | 50.0% | |
| TCTTGTCCACTTGCACCTCT+AGG | + | chr5.2:403425-403444 | None:intergenic | 50.0% | |
| TGCGAACGTAGATGGCATCT+TGG | + | chr5.2:405568-405587 | None:intergenic | 50.0% | |
| TGCTTCCATGACGACTCTTC+TGG | - | chr5.2:402237-402256 | MS.gene40528:intron | 50.0% | |
| TGTGTACGCTGCTACCCAAA+TGG | - | chr5.2:403614-403633 | MS.gene40528:intron | 50.0% | |
| TTACATGGGGTGGAATGCCA+TGG | + | chr5.2:404169-404188 | None:intergenic | 50.0% | |
| TTCGAGATTCCGTCTGATGG+AGG | + | chr5.2:402090-402109 | None:intergenic | 50.0% | |
| TTTGCCACAGGAGGTTGTGA+CGG | - | chr5.2:405082-405101 | MS.gene40528:intron | 50.0% | |
| ! | CTCACCTCTAAGGACATCAG+CGG | + | chr5.2:402187-402206 | None:intergenic | 50.0% |
| ! | GAGAGTGCAGCAATGCTACT+TGG | + | chr5.2:405256-405275 | None:intergenic | 50.0% |
| ! | GGACAAGAGCGTACTCTAGT+TGG | - | chr5.2:403437-403456 | MS.gene40528:intron | 50.0% |
| ! | GGTTGCAAGTTGGGAAAGGT+TGG | - | chr5.2:404466-404485 | MS.gene40528:intron | 50.0% |
| ! | GTTTGTTAACTCTCGACCGG+CGG | + | chr5.2:402067-402086 | None:intergenic | 50.0% |
| !!! | TTGGGAAGGGCTTTGGGTTT+TGG | + | chr5.2:405614-405633 | None:intergenic | 50.0% |
| AAGAACCAATCTGGGGGACG+AGG | - | chr5.2:404784-404803 | MS.gene40528:intron | 55.0% | |
| AGAGGTGAGTTCCTTCACGG+CGG | - | chr5.2:402198-402217 | MS.gene40528:intron | 55.0% | |
| CAGATTAGAGAGAGGGAGGG+AGG | + | chr5.2:405520-405539 | None:intergenic | 55.0% | |
| CCGCCGATAACACTGTCAGA+CGG | - | chr5.2:402271-402290 | MS.gene40528:intron | 55.0% | |
| CCGTCTGACAGTGTTATCGG+CGG | + | chr5.2:402274-402293 | None:intergenic | 55.0% | |
| CGCTGCTACCCAAATGGAAC+AGG | - | chr5.2:403620-403639 | MS.gene40528:intron | 55.0% | |
| CGGCTTGTAGTAGCAACAGC+TGG | - | chr5.2:403509-403528 | MS.gene40528:CDS | 55.0% | |
| GCAACCGCTGATGTCCTTAG+AGG | - | chr5.2:402180-402199 | MS.gene40528:intron | 55.0% | |
| GCAGGATTGGGAAGGGCTTT+GGG | + | chr5.2:405620-405639 | None:intergenic | 55.0% | |
| TCACGCTGCAGGATTGGGAA+GGG | + | chr5.2:405627-405646 | None:intergenic | 55.0% | |
| TCTTTCCTCGTCCCCCAGAT+TGG | + | chr5.2:404792-404811 | None:intergenic | 55.0% | |
| TGCAGGATTGGGAAGGGCTT+TGG | + | chr5.2:405621-405640 | None:intergenic | 55.0% | |
| TGGGTAGCAGCGTACACATC+TGG | + | chr5.2:403612-403631 | None:intergenic | 55.0% | |
| ! | AGAGAGAGAGAGCGTGTGTG+TGG | + | chr5.2:405371-405390 | None:intergenic | 55.0% |
| ! | TGACCTATCTGAGGCTAGCC+AGG | - | chr5.2:403965-403984 | MS.gene40528:intron | 55.0% |
| !! | TGTTGAAGGGCGGGTTGCAA+TGG | - | chr5.2:403935-403954 | MS.gene40528:intron | 55.0% |
| !! | TTGCCTGGCTAGCCTCAGAT+AGG | + | chr5.2:403971-403990 | None:intergenic | 55.0% |
| CAAGAACAGGTCCGCCGTGA+AGG | + | chr5.2:402212-402231 | None:intergenic | 60.0% | |
| GCAACACCAGTGGTATCCGC+CGG | - | chr5.2:402048-402067 | MS.gene40528:CDS | 60.0% | |
| GTTGAGTACTCCTACGCCGC+AGG | - | chr5.2:402431-402450 | MS.gene40528:CDS | 60.0% | |
| TAGAGAGAGGGAGGGAGGGA+GGG | + | chr5.2:405515-405534 | None:intergenic | 60.0% | |
| TTAGAGAGAGGGAGGGAGGG+AGG | + | chr5.2:405516-405535 | None:intergenic | 60.0% | |
| ! | TGGGACCCTAGAGGTGCAAG+TGG | - | chr5.2:403416-403435 | MS.gene40528:intron | 60.0% |
| TCTCGACCGGCGGATACCAC+TGG | + | chr5.2:402057-402076 | None:intergenic | 65.0% | |
| AGAGAGGGAGGGAGGGAGGG+AGG | + | chr5.2:405512-405531 | None:intergenic | 70.0% | |
| GAGAGGGAGGGAGGGAGGGA+GGG | + | chr5.2:405511-405530 | None:intergenic | 70.0% | |
| AGGGAGGGAGGGAGGGAGGG+AGG | + | chr5.2:405488-405507 | None:intergenic | 75.0% | |
| GGAGGGAGGGAGGGAGGGAG+AGG | + | chr5.2:405486-405505 | None:intergenic | 75.0% | |
| GGGAGGGAGGGAGGGAGGGA+GGG | + | chr5.2:405487-405506 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 402045 | 405646 | 402045 | ID=MS.gene40528 |
| chr5.2 | mRNA | 402045 | 405646 | 402045 | ID=MS.gene40528.t1;Parent=MS.gene40528 |
| chr5.2 | exon | 405399 | 405646 | 405399 | ID=MS.gene40528.t1.exon1;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 405399 | 405646 | 405399 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| chr5.2 | exon | 405239 | 405321 | 405239 | ID=MS.gene40528.t1.exon2;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 405239 | 405321 | 405239 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| chr5.2 | exon | 404050 | 404316 | 404050 | ID=MS.gene40528.t1.exon3;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 404050 | 404316 | 404050 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| chr5.2 | exon | 403697 | 403772 | 403697 | ID=MS.gene40528.t1.exon4;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 403697 | 403772 | 403697 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| chr5.2 | exon | 403507 | 403587 | 403507 | ID=MS.gene40528.t1.exon5;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 403507 | 403587 | 403507 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| chr5.2 | exon | 402541 | 402619 | 402541 | ID=MS.gene40528.t1.exon6;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 402541 | 402619 | 402541 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| chr5.2 | exon | 402350 | 402450 | 402350 | ID=MS.gene40528.t1.exon7;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 402350 | 402450 | 402350 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| chr5.2 | exon | 402045 | 402132 | 402045 | ID=MS.gene40528.t1.exon8;Parent=MS.gene40528.t1 |
| chr5.2 | CDS | 402045 | 402132 | 402045 | ID=cds.MS.gene40528.t1;Parent=MS.gene40528.t1 |
| Gene Sequence |
| Protein sequence |
