AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016384

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016384.t1 MTR_8g043650 92.857 154 11 0 1 154 18 171 1.01e-105 301
MS.gene016384.t1 MTR_1g105910 92.857 154 11 0 1 154 18 171 1.07e-105 301
MS.gene016384.t1 MTR_1g105920 88.312 154 18 0 1 154 18 171 2.61e-100 288
MS.gene016384.t1 MTR_1g012570 88.312 154 18 0 1 154 18 171 1.88e-97 281
MS.gene016384.t1 MTR_1g106070 85.714 154 22 0 1 154 18 171 5.91e-97 277
MS.gene016384.t1 MTR_3g052920 85.065 154 23 0 1 154 18 171 1.12e-96 278
MS.gene016384.t1 MTR_2g030740 85.714 154 22 0 1 154 18 171 1.56e-96 278
MS.gene016384.t1 MTR_1g105905 83.766 154 25 0 1 154 1 154 4.73e-94 271
MS.gene016384.t1 MTR_1g108510 77.181 149 34 0 1 149 18 166 2.84e-82 242
MS.gene016384.t1 MTR_3g030770 77.181 149 34 0 1 149 18 166 7.61e-82 241
MS.gene016384.t1 MTR_2g093190 75.168 149 37 0 1 149 18 166 1.78e-78 232
MS.gene016384.t1 MTR_1g108580 74.497 149 38 0 1 149 18 166 1.32e-77 230
MS.gene016384.t1 MTR_3g052870 74.675 154 20 1 1 154 18 152 1.67e-76 227
MS.gene016384.t1 MTR_0121s0080 70.130 154 46 0 1 154 18 171 2.35e-73 219
MS.gene016384.t1 MTR_5g045560 68.831 154 48 0 1 154 18 171 1.05e-72 218
MS.gene016384.t1 MTR_1g077360 65.359 153 53 0 1 153 18 170 1.94e-70 212
MS.gene016384.t1 MTR_2g085280 65.789 152 52 0 1 152 18 169 2.84e-70 212
MS.gene016384.t1 MTR_2g085250 65.789 152 52 0 1 152 18 169 2.94e-70 212
MS.gene016384.t1 MTR_1g075600 66.013 153 52 0 1 153 18 170 1.11e-69 210
MS.gene016384.t1 MTR_5g055100 64.474 152 54 0 1 152 18 169 3.91e-68 206
MS.gene016384.t1 MTR_7g062350 66.216 148 50 0 7 154 36 183 6.21e-66 201
MS.gene016384.t1 MTR_5g053390 65.132 152 53 0 1 152 18 169 8.98e-66 200
MS.gene016384.t1 MTR_3g080940 52.597 154 73 0 1 154 18 171 1.32e-57 179
MS.gene016384.t1 MTR_0121s0100 73.043 115 31 0 1 115 18 132 8.35e-57 174
MS.gene016384.t1 MTR_3g030780 68.696 115 36 0 1 115 18 132 1.65e-52 163
MS.gene016384.t1 MTR_1g075570 58.824 153 49 1 1 153 1 139 3.17e-52 163
MS.gene016384.t1 MTR_3g067910 66.667 102 34 0 4 105 2 103 1.43e-44 142
MS.gene016384.t1 MTR_2g105290 38.312 154 85 2 4 154 24 170 8.30e-33 114
MS.gene016384.t1 MTR_8g086290 39.216 153 83 2 1 150 21 166 9.31e-33 114
MS.gene016384.t1 MTR_7g028448 42.029 138 68 3 5 142 25 150 2.87e-32 113
MS.gene016384.t1 MTR_4g036915 42.029 138 68 3 5 142 25 150 2.87e-32 113
MS.gene016384.t1 MTR_1g108500 62.887 97 15 1 5 101 110 185 3.01e-31 114
MS.gene016384.t1 MTR_4g127140 36.810 163 83 4 5 154 25 180 2.63e-29 105
MS.gene016384.t1 MTR_3g067875 83.929 56 9 0 1 56 1 56 5.94e-28 99.0
MS.gene016384.t1 MTR_3g067915 48.936 94 48 0 16 109 3 96 4.17e-24 90.1
MS.gene016384.t1 MTR_3g067870 73.770 61 16 0 1 61 85 145 4.18e-24 92.0
MS.gene016384.t1 MTR_1g047550 64.151 53 19 0 8 60 18 70 1.86e-19 80.5
MS.gene016384.t1 MTR_8g051580 45.882 85 44 1 8 92 18 100 2.46e-19 80.1
MS.gene016384.t1 MTR_8g079502 61.818 55 21 0 8 62 18 72 6.48e-19 79.0
MS.gene016384.t1 MTR_1g054265 43.564 101 53 2 8 108 18 114 8.88e-19 78.6
MS.gene016384.t1 MTR_4g131030 39.000 100 46 3 8 92 18 117 9.95e-19 79.3
MS.gene016384.t1 MTR_1g063160 45.833 96 47 3 8 101 18 110 1.09e-18 78.6
MS.gene016384.t1 MTR_8g046350 44.444 81 40 1 8 88 18 93 8.03e-18 75.9
MS.gene016384.t1 MTR_4g094632 37.113 97 59 1 1 97 11 105 1.50e-15 69.7
MS.gene016384.t1 MTR_4g102530 50.769 65 32 0 1 65 11 75 4.02e-15 69.7
MS.gene016384.t1 MTR_4g094638 37.895 95 58 1 3 96 13 107 5.96e-14 65.9
MS.gene016384.t1 MTR_4g093970 55.172 58 26 0 1 58 37 94 6.90e-14 67.0
MS.gene016384.t1 MTR_6g464720 53.333 60 27 1 1 59 11 70 7.14e-14 67.0
MS.gene016384.t1 MTR_8g022970 33.333 135 77 3 10 138 36 163 8.40e-14 65.9
MS.gene016384.t1 MTR_1g101970 50.847 59 29 0 1 59 11 69 3.24e-13 64.3
MS.gene016384.t1 MTR_7g075870 37.255 102 62 1 1 102 11 110 3.50e-13 64.7
MS.gene016384.t1 MTR_8g033220 47.143 70 37 0 1 70 11 80 5.83e-13 64.3
MS.gene016384.t1 MTR_1g053070 31.613 155 89 4 1 153 11 150 6.18e-13 64.3
MS.gene016384.t1 MTR_8g033220 47.143 70 37 0 1 70 11 80 6.81e-13 63.9
MS.gene016384.t1 MTR_4g109830 51.667 60 28 1 1 59 11 70 8.91e-13 63.9
MS.gene016384.t1 MTR_8g033270 52.542 59 28 0 1 59 11 69 1.27e-12 63.5
MS.gene016384.t1 MTR_3g005530 47.458 59 31 0 1 59 11 69 1.36e-12 63.2
MS.gene016384.t1 MTR_2g009890 49.153 59 30 0 1 59 11 69 1.68e-12 63.5
MS.gene016384.t1 MTR_3g102570 41.053 95 53 3 1 94 11 103 1.82e-12 63.9
MS.gene016384.t1 MTR_3g109930 30.000 140 82 3 10 142 20 150 4.47e-12 60.8
MS.gene016384.t1 MTR_3g452380 38.462 91 46 1 1 91 26 106 6.12e-12 61.6
MS.gene016384.t1 MTR_7g075870 36.893 103 62 2 1 102 11 111 8.02e-12 60.8
MS.gene016384.t1 MTR_5g032150 30.409 171 100 6 1 153 11 180 1.12e-11 60.8
MS.gene016384.t1 MTR_5g066180 27.389 157 89 3 1 154 11 145 1.94e-11 60.1
MS.gene016384.t1 MTR_8g087860 49.153 59 30 0 1 59 27 85 1.97e-11 60.5
MS.gene016384.t1 MTR_5g032520 32.117 137 77 4 1 125 11 143 2.09e-11 60.1
MS.gene016384.t1 MTR_8g066260 50.000 60 29 1 1 59 11 70 2.40e-11 60.1
MS.gene016384.t1 MTR_2g017865 37.895 95 58 1 1 95 26 119 4.92e-11 59.3
MS.gene016384.t1 MTR_5g046790 46.774 62 30 1 1 62 11 69 5.35e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016384.t1 AT5G60440 54.839 155 67 2 1 152 16 170 4.95e-51 165
MS.gene016384.t1 AT2G24840 46.711 152 70 4 1 146 72 218 2.47e-37 129
MS.gene016384.t1 AT1G01530 43.836 146 79 2 1 145 16 159 2.52e-31 112
MS.gene016384.t1 AT4G36590 43.624 149 78 2 1 143 16 164 5.22e-31 112
MS.gene016384.t1 AT1G65360 40.909 154 88 2 1 153 16 167 1.29e-30 110
MS.gene016384.t1 AT2G34440 45.545 101 46 2 8 104 18 113 1.38e-23 90.9
MS.gene016384.t1 AT3G66656 40.870 115 63 2 8 117 18 132 2.07e-21 85.5
MS.gene016384.t1 AT1G72350 33.333 135 57 4 4 138 55 156 7.93e-16 72.0
MS.gene016384.t1 AT4G22950 45.588 68 37 0 1 68 11 78 7.03e-15 68.6
MS.gene016384.t1 AT2G45660 50.000 60 30 0 1 60 11 70 2.24e-14 66.6
MS.gene016384.t1 AT4G22950 45.588 68 37 0 1 68 11 78 5.13e-14 67.0
MS.gene016384.t1 AT4G22950 45.588 68 37 0 1 68 11 78 5.13e-14 67.0
MS.gene016384.t1 AT1G28460 31.933 119 78 1 9 124 25 143 7.29e-14 65.9
MS.gene016384.t1 AT4G09960 44.156 77 42 1 1 76 11 87 8.35e-14 66.6
MS.gene016384.t1 AT4G09960 44.156 77 42 1 1 76 12 88 8.73e-14 66.6
MS.gene016384.t1 AT2G45660 50.000 60 30 0 1 60 11 70 9.55e-14 66.2
MS.gene016384.t1 AT4G09960 44.156 77 42 1 1 76 11 87 9.62e-14 66.2
MS.gene016384.t1 AT3G04100 26.866 134 94 3 3 132 25 158 1.21e-13 65.9
MS.gene016384.t1 AT4G09960 44.156 77 42 1 1 76 21 97 1.31e-13 66.2
MS.gene016384.t1 AT4G09960 44.156 77 42 1 1 76 37 113 1.48e-13 66.2
MS.gene016384.t1 AT2G45650 52.542 59 28 0 1 59 11 69 1.86e-13 65.9
MS.gene016384.t1 AT4G09960 44.156 77 42 1 1 76 106 182 1.87e-13 66.6
MS.gene016384.t1 AT1G17310 50.877 57 26 1 8 64 64 118 2.18e-13 65.5
MS.gene016384.t1 AT1G29962 29.801 151 99 4 9 152 25 175 2.50e-13 64.7
MS.gene016384.t1 AT1G17310 32.450 151 61 5 8 153 75 189 2.60e-13 65.1
MS.gene016384.t1 AT2G22540 37.313 134 64 5 1 120 11 138 7.91e-13 63.9
MS.gene016384.t1 AT2G22540 37.313 134 64 5 1 120 11 138 7.91e-13 63.9
MS.gene016384.t1 AT3G57230 45.763 59 32 0 1 59 11 69 1.17e-12 62.0
MS.gene016384.t1 AT4G24540 33.594 128 73 4 8 125 18 143 2.03e-12 62.8
MS.gene016384.t1 AT3G57230 45.763 59 32 0 1 59 11 69 2.42e-12 62.8
MS.gene016384.t1 AT3G57230 45.763 59 32 0 1 59 11 69 2.42e-12 62.8
MS.gene016384.t1 AT3G61120 50.847 59 29 0 1 59 11 69 2.74e-12 62.8
MS.gene016384.t1 AT4G11880 46.875 64 33 1 1 63 11 74 3.44e-12 61.6
MS.gene016384.t1 AT4G11880 46.875 64 33 1 1 63 11 74 3.44e-12 61.6
MS.gene016384.t1 AT5G60910 53.226 62 26 1 1 62 11 69 4.93e-12 62.0
MS.gene016384.t1 AT4G37940 45.763 59 32 0 1 59 11 69 5.60e-12 61.6
MS.gene016384.t1 AT4G11880 46.875 64 33 1 1 63 11 74 5.72e-12 61.6
MS.gene016384.t1 AT4G11880 46.875 64 33 1 1 63 11 74 5.72e-12 61.6
MS.gene016384.t1 AT4G37940 45.763 59 32 0 1 59 11 69 5.76e-12 61.2
MS.gene016384.t1 AT2G22630 45.763 59 32 0 1 59 11 69 6.07e-12 61.6
MS.gene016384.t1 AT2G22630 45.763 59 32 0 1 59 11 69 6.07e-12 61.6
MS.gene016384.t1 AT4G18960 38.462 91 46 1 1 91 27 107 1.00e-11 61.2
MS.gene016384.t1 AT4G37940 45.763 59 32 0 1 59 11 69 1.17e-11 60.1
MS.gene016384.t1 AT1G22130 34.375 96 62 1 1 95 11 106 1.21e-11 61.6
MS.gene016384.t1 AT1G77950 46.032 63 32 2 5 66 15 76 1.29e-11 60.8
MS.gene016384.t1 AT1G77950 46.032 63 32 2 5 66 15 76 1.29e-11 60.8
MS.gene016384.t1 AT1G77950 46.032 63 32 2 5 66 15 76 1.29e-11 60.8
MS.gene016384.t1 AT1G77950 46.032 63 32 2 5 66 15 76 1.29e-11 60.8
MS.gene016384.t1 AT1G69120 40.244 82 46 1 1 82 11 89 1.54e-11 60.5
MS.gene016384.t1 AT5G51870 47.458 59 31 0 1 59 11 69 1.69e-11 59.3
MS.gene016384.t1 AT5G51870 47.458 59 31 0 1 59 11 69 1.73e-11 60.1
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.13e-11 58.9
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.13e-11 58.9
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.13e-11 58.9
MS.gene016384.t1 AT1G69120 40.244 82 46 1 1 82 11 89 2.34e-11 60.1
MS.gene016384.t1 AT5G51870 47.458 59 31 0 1 59 11 69 2.53e-11 59.7
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.60e-11 58.5
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.60e-11 58.5
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.60e-11 58.5
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.60e-11 58.5
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.60e-11 58.5
MS.gene016384.t1 AT1G26310 50.000 60 29 1 1 59 11 70 2.72e-11 60.1
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 2.89e-11 57.4
MS.gene016384.t1 AT5G51870 47.458 59 31 0 1 59 34 92 2.94e-11 59.3
MS.gene016384.t1 AT5G51870 47.458 59 31 0 1 59 21 79 3.09e-11 59.7
MS.gene016384.t1 AT1G77980 34.375 96 62 1 1 95 11 106 3.37e-11 60.5
MS.gene016384.t1 AT5G13790 39.286 84 42 1 1 84 11 85 5.39e-11 59.3
MS.gene016384.t1 AT3G30260 36.364 110 63 3 1 110 11 113 5.96e-11 58.9
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 6.26e-11 58.5
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 6.26e-11 58.5
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 6.26e-11 58.5
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 6.44e-11 58.2
MS.gene016384.t1 AT5G62165 44.068 59 33 0 1 59 11 69 6.44e-11 58.2
MS.gene016384.t1 AT3G54340 48.148 54 28 0 1 54 11 64 7.67e-11 58.5

Find 33 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGGGTTGGTCCCGTTGA+TGG 0.316276 8.2:+57510620 MS.gene016384:CDS
AGGCGACCGAGGCTCAATTT+TGG 0.319875 8.2:+57510600 MS.gene016384:CDS
TGCTGATAGGCTTGTTATCT+AGG 0.320772 8.2:+57510712 MS.gene016384:CDS
ATTGCATGGTACCATTGTTT+TGG 0.328016 8.2:-57510463 None:intergenic
CCTCGGTCGCCTTGCGTAAG+TGG 0.412707 8.2:-57510589 None:intergenic
TCTTCTCCATGTCCAGTAGC+TGG 0.428165 8.2:-57510547 None:intergenic
GTCCCGTTGATGGGATGAAT+AGG 0.432754 8.2:+57510630 MS.gene016384:CDS
TTTGGAGGAGACTAAGAAAC+TGG 0.447124 8.2:+57510679 MS.gene016384:CDS
GGTGGGTTGGTCCCGTTGAT+GGG 0.452333 8.2:+57510621 MS.gene016384:CDS
TGGTTGCACATCATGCTGAT+AGG 0.453644 8.2:+57510699 MS.gene016384:CDS
TCCCGTTGATGGGATGAATA+GGG 0.472863 8.2:+57510631 MS.gene016384:CDS
CTCTATGACCGTATCAACAT+TGG 0.477809 8.2:-57510417 None:intergenic
GCCCTATTCATCCCATCAAC+GGG 0.481029 8.2:-57510632 None:intergenic
AGTATTGAGCTCGCGCACAT+TGG 0.504609 8.2:-57510507 None:intergenic
GACTCAGATCAACCAGCTAC+TGG 0.508380 8.2:+57510535 MS.gene016384:CDS
GCTGATAGGCTTGTTATCTA+GGG 0.525556 8.2:+57510713 MS.gene016384:CDS
ACTGAGAGTGCAAAACTCAC+TGG 0.534883 8.2:-57510333 None:intergenic
GGCCCTATTCATCCCATCAA+CGG 0.536262 8.2:-57510633 None:intergenic
TCTATGACCGTATCAACATT+GGG 0.539713 8.2:-57510416 None:intergenic
TGGCCAACCCAATGTTGATA+CGG 0.545005 8.2:+57510409 MS.gene016384:CDS
GCTCGCGCACATTGGCGCTA+CGG 0.552531 8.2:-57510499 None:intergenic
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 8.2:+57510297 MS.gene016384:CDS
GATCAACCAGCTACTGGACA+TGG 0.554332 8.2:+57510541 MS.gene016384:CDS
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 8.2:+57510296 MS.gene016384:CDS
CCACTTACGCAAGGCGACCG+AGG 0.585405 8.2:+57510589 MS.gene016384:CDS
AATGAAAATACCTTCTCCCC+AGG 0.587583 8.2:-57510386 None:intergenic
AACCCACCAAAATTGAGCCT+CGG 0.597830 8.2:-57510606 None:intergenic
TGACCGTATCAACATTGGGT+TGG 0.600758 8.2:-57510412 None:intergenic
CGAGTCCCGCCCCAAAACAA+TGG 0.608244 8.2:+57510452 MS.gene016384:CDS
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 8.2:-57510310 None:intergenic
TGGTACCATGCAATTCATTG+AGG 0.638950 8.2:+57510472 MS.gene016384:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.640763 8.2:-57510477 None:intergenic
AGAGCTGAACCACTTACGCA+AGG 0.669940 8.2:+57510580 MS.gene016384:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGAAAAATTCAAGTT+GGG - chr8.2:57510657-57510676 None:intergenic 20.0%
!!! CCAACTTGAATTTTTCAAAA+AGG + chr8.2:57510655-57510674 MS.gene016384:CDS 25.0%
!!! CCTTTTTGAAAAATTCAAGT+TGG - chr8.2:57510658-57510677 None:intergenic 25.0%
!!! TGAATTTTTCAAAAAGGCTT+TGG + chr8.2:57510661-57510680 MS.gene016384:CDS 25.0%
!! ATTTTTCAAAAAGGCTTTGG+AGG + chr8.2:57510664-57510683 MS.gene016384:CDS 30.0%
TCTATGACCGTATCAACATT+GGG - chr8.2:57510419-57510438 None:intergenic 35.0%
! ATTGCATGGTACCATTGTTT+TGG - chr8.2:57510466-57510485 None:intergenic 35.0%
! TTGCATGGTACCATTGTTTT+GGG - chr8.2:57510465-57510484 None:intergenic 35.0%
AATGAAAATACCTTCTCCCC+AGG - chr8.2:57510389-57510408 None:intergenic 40.0%
CTCTATGACCGTATCAACAT+TGG - chr8.2:57510420-57510439 None:intergenic 40.0%
TGGTACCATGCAATTCATTG+AGG + chr8.2:57510472-57510491 MS.gene016384:CDS 40.0%
TTTGGAGGAGACTAAGAAAC+TGG + chr8.2:57510679-57510698 MS.gene016384:CDS 40.0%
! CTCTCATTGTTTTCTCACCT+GGG + chr8.2:57510369-57510388 MS.gene016384:CDS 40.0%
! TCTCATTGTTTTCTCACCTG+GGG + chr8.2:57510370-57510389 MS.gene016384:CDS 40.0%
!! TGCATGGTACCATTGTTTTG+GGG - chr8.2:57510464-57510483 None:intergenic 40.0%
!!! GGGGAGAAGGTATTTTCATT+TGG + chr8.2:57510389-57510408 MS.gene016384:CDS 40.0%
AACCCACCAAAATTGAGCCT+CGG - chr8.2:57510609-57510628 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG - chr8.2:57510313-57510332 None:intergenic 45.0%
GTGAGCCTCAATGAATTGCA+TGG - chr8.2:57510480-57510499 None:intergenic 45.0%
TGACCGTATCAACATTGGGT+TGG - chr8.2:57510415-57510434 None:intergenic 45.0%
TGGCCAACCCAATGTTGATA+CGG + chr8.2:57510409-57510428 MS.gene016384:CDS 45.0%
TGGTTGCACATCATGCTGAT+AGG + chr8.2:57510699-57510718 MS.gene016384:CDS 45.0%
! ACTGAGAGTGCAAAACTCAC+TGG - chr8.2:57510336-57510355 None:intergenic 45.0%
! AGTGAGTTTTGCACTCTCAG+TGG + chr8.2:57510335-57510354 MS.gene016384:CDS 45.0%
! GCTCTCATTGTTTTCTCACC+TGG + chr8.2:57510368-57510387 MS.gene016384:CDS 45.0%
! TCCCGTTGATGGGATGAATA+GGG + chr8.2:57510631-57510650 MS.gene016384:CDS 45.0%
!!! ATGGTACCATTGTTTTGGGG+CGG - chr8.2:57510461-57510480 None:intergenic 45.0%
AGAGCTGAACCACTTACGCA+AGG + chr8.2:57510580-57510599 MS.gene016384:CDS 50.0%
GACTCAGATCAACCAGCTAC+TGG + chr8.2:57510535-57510554 MS.gene016384:CDS 50.0%
GATCAACCAGCTACTGGACA+TGG + chr8.2:57510541-57510560 MS.gene016384:CDS 50.0%
GCCCTATTCATCCCATCAAC+GGG - chr8.2:57510635-57510654 None:intergenic 50.0%
GGCCCTATTCATCCCATCAA+CGG - chr8.2:57510636-57510655 None:intergenic 50.0%
TCTTCTCCATGTCCAGTAGC+TGG - chr8.2:57510550-57510569 None:intergenic 50.0%
! AGTATTGAGCTCGCGCACAT+TGG - chr8.2:57510510-57510529 None:intergenic 50.0%
! GTCCCGTTGATGGGATGAAT+AGG + chr8.2:57510630-57510649 MS.gene016384:CDS 50.0%
! TGTTTTCTCACCTGGGGAGA+AGG + chr8.2:57510376-57510395 MS.gene016384:CDS 50.0%
!! GACCGAGGCTCAATTTTGGT+GGG + chr8.2:57510604-57510623 MS.gene016384:CDS 50.0%
!! GAGGCTCAATTTTGGTGGGT+TGG + chr8.2:57510608-57510627 MS.gene016384:CDS 50.0%
!!! TGGTACCATTGTTTTGGGGC+GGG - chr8.2:57510460-57510479 None:intergenic 50.0%
! AGGCGACCGAGGCTCAATTT+TGG + chr8.2:57510600-57510619 MS.gene016384:CDS 55.0%
! CGACCGAGGCTCAATTTTGG+TGG + chr8.2:57510603-57510622 MS.gene016384:CDS 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG + chr8.2:57510296-57510315 MS.gene016384:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG + chr8.2:57510297-57510316 MS.gene016384:CDS 55.0%
CGAGTCCCGCCCCAAAACAA+TGG + chr8.2:57510452-57510471 MS.gene016384:CDS 60.0%
!! GGTGGGTTGGTCCCGTTGAT+GGG + chr8.2:57510621-57510640 MS.gene016384:CDS 60.0%
!! TGGTGGGTTGGTCCCGTTGA+TGG + chr8.2:57510620-57510639 MS.gene016384:CDS 60.0%
CCACTTACGCAAGGCGACCG+AGG + chr8.2:57510589-57510608 MS.gene016384:CDS 65.0%
CCTCGGTCGCCTTGCGTAAG+TGG - chr8.2:57510592-57510611 None:intergenic 65.0%
GCTCGCGCACATTGGCGCTA+CGG - chr8.2:57510502-57510521 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 57510269 57510733 57510269 ID=MS.gene016384
chr8.2 mRNA 57510269 57510733 57510269 ID=MS.gene016384.t1;Parent=MS.gene016384
chr8.2 exon 57510269 57510733 57510269 ID=MS.gene016384.t1.exon1;Parent=MS.gene016384.t1
chr8.2 CDS 57510269 57510733 57510269 ID=cds.MS.gene016384.t1;Parent=MS.gene016384.t1
Gene Sequence

>MS.gene016384

ATGAGCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGTTTTGCACTCTCAGTGGTGCAGATGTTGCTCTCATTGTTTTCTCACCTGGGGAGAAGGTATTTTCATTTGGCCAACCCAATGTTGATACGGTCATAGAGCGTTATCTCTCTCGAGTCCCGCCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCACCGTAGCGCCAATGTGCGCGAGCTCAATACTCAGCTGACTCAGATCAACCAGCTACTGGACATGGAGAAGAAACGTGCTGAAGAGCTGAACCACTTACGCAAGGCGACCGAGGCTCAATTTTGGTGGGTTGGTCCCGTTGATGGGATGAATAGGGCCCAACTTGAATTTTTCAAAAAGGCTTTGGAGGAGACTAAGAAACTGGTTGCACATCATGCTGATAGGCTTGTTATCTAG
Protein sequence

>MS.gene016384.t1

MSNESNLQVTFSKRRSGLFKKASEFCTLSGADVALIVFSPGEKVFSFGQPNVDTVIERYLSRVPPQNNGTMQFIEAHRSANVRELNTQLTQINQLLDMEKKRAEELNHLRKATEAQFWWVGPVDGMNRAQLEFFKKALEETKKLVAHHADRLVI