Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017341.t1 | XP_003616166.2 | 97.2 | 843 | 24 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1673.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017341.t1 | Q9FX32 | 72.3 | 806 | 223 | 0 | 7 | 812 | 9 | 814 | 0.0e+00 | 1233.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017341.t1 | G7KFT7 | 97.2 | 843 | 24 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1673.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene017341 | MS.gene005566 | PPI |
| MS.gene017341 | MS.gene28775 | PPI |
| MS.gene030241 | MS.gene017341 | PPI |
| MS.gene012174 | MS.gene017341 | PPI |
| MS.gene017341 | MS.gene26705 | PPI |
| MS.gene025337 | MS.gene017341 | PPI |
| MS.gene017341 | MS.gene20759 | PPI |
| MS.gene017341 | MS.gene070146 | PPI |
| MS.gene062124 | MS.gene017341 | PPI |
| MS.gene017341 | MS.gene22944 | PPI |
| MS.gene017341 | MS.gene07237 | PPI |
| MS.gene017341 | MS.gene07013 | PPI |
| MS.gene85350 | MS.gene017341 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017341.t1 | MTR_5g076830 | 97.153 | 843 | 24 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1717 |
| MS.gene017341.t1 | MTR_3g064610 | 81.851 | 832 | 146 | 2 | 1 | 827 | 1 | 832 | 0.0 | 1444 |
| MS.gene017341.t1 | MTR_6g478000 | 64.792 | 818 | 216 | 3 | 13 | 828 | 15 | 762 | 0.0 | 1097 |
| MS.gene017341.t1 | MTR_6g478030 | 75.120 | 627 | 156 | 0 | 130 | 756 | 894 | 1520 | 0.0 | 993 |
| MS.gene017341.t1 | MTR_7g108930 | 55.915 | 803 | 350 | 2 | 9 | 811 | 9 | 807 | 0.0 | 956 |
| MS.gene017341.t1 | MTR_1g088170 | 56.679 | 801 | 346 | 1 | 1 | 801 | 1 | 800 | 0.0 | 950 |
| MS.gene017341.t1 | MTR_2g044070 | 54.895 | 807 | 358 | 4 | 6 | 811 | 3 | 804 | 0.0 | 939 |
| MS.gene017341.t1 | MTR_4g124660 | 54.907 | 805 | 357 | 4 | 4 | 807 | 3 | 802 | 0.0 | 931 |
| MS.gene017341.t1 | MTR_4g124660 | 56.250 | 752 | 323 | 4 | 4 | 754 | 3 | 749 | 0.0 | 884 |
| MS.gene017341.t1 | MTR_6g478020 | 72.500 | 200 | 53 | 1 | 636 | 833 | 1 | 200 | 2.39e-96 | 328 |
| MS.gene017341.t1 | MTR_0277s0020 | 60.417 | 192 | 42 | 2 | 644 | 833 | 1159 | 1318 | 6.50e-66 | 240 |
| MS.gene017341.t1 | MTR_0419s0050 | 54.088 | 159 | 13 | 2 | 580 | 738 | 1 | 99 | 2.63e-45 | 158 |
| MS.gene017341.t1 | MTR_4g115620 | 25.878 | 541 | 323 | 20 | 283 | 777 | 168 | 676 | 4.76e-35 | 144 |
| MS.gene017341.t1 | MTR_5g091340 | 25.483 | 518 | 320 | 18 | 283 | 758 | 171 | 664 | 6.49e-34 | 140 |
| MS.gene017341.t1 | MTR_3g047380 | 25.194 | 516 | 321 | 18 | 283 | 758 | 167 | 657 | 1.13e-31 | 133 |
| MS.gene017341.t1 | MTR_0277s0030 | 72.059 | 68 | 19 | 0 | 580 | 647 | 1 | 68 | 4.89e-25 | 104 |
| MS.gene017341.t1 | MTR_0277s0030 | 49.383 | 81 | 39 | 1 | 755 | 833 | 65 | 145 | 1.82e-20 | 91.3 |
| MS.gene017341.t1 | MTR_0419s0010 | 48.077 | 104 | 19 | 1 | 699 | 802 | 2 | 70 | 5.96e-25 | 99.4 |
| MS.gene017341.t1 | MTR_4g021160 | 52.239 | 67 | 31 | 1 | 7 | 72 | 10 | 76 | 5.47e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017341.t1 | AT1G73370 | 72.333 | 806 | 223 | 0 | 7 | 812 | 9 | 814 | 0.0 | 1266 |
| MS.gene017341.t1 | AT1G73370 | 72.333 | 806 | 223 | 0 | 7 | 812 | 9 | 814 | 0.0 | 1266 |
| MS.gene017341.t1 | AT5G37180 | 70.574 | 836 | 241 | 2 | 10 | 843 | 5 | 837 | 0.0 | 1242 |
| MS.gene017341.t1 | AT1G73370 | 73.117 | 770 | 207 | 0 | 43 | 812 | 1 | 770 | 0.0 | 1214 |
| MS.gene017341.t1 | AT5G37180 | 74.730 | 649 | 162 | 1 | 197 | 843 | 1 | 649 | 0.0 | 1029 |
| MS.gene017341.t1 | AT4G02280 | 56.522 | 805 | 349 | 1 | 7 | 811 | 6 | 809 | 0.0 | 975 |
| MS.gene017341.t1 | AT5G37180 | 75.296 | 591 | 144 | 1 | 255 | 843 | 1 | 591 | 0.0 | 943 |
| MS.gene017341.t1 | AT5G49190 | 54.512 | 809 | 355 | 3 | 9 | 811 | 5 | 806 | 0.0 | 936 |
| MS.gene017341.t1 | AT5G49190 | 55.598 | 786 | 336 | 3 | 32 | 811 | 18 | 796 | 0.0 | 930 |
| MS.gene017341.t1 | AT5G20830 | 55.390 | 807 | 352 | 5 | 7 | 811 | 8 | 808 | 0.0 | 925 |
| MS.gene017341.t1 | AT5G20830 | 55.390 | 807 | 352 | 5 | 7 | 811 | 8 | 808 | 0.0 | 925 |
| MS.gene017341.t1 | AT5G20830 | 55.390 | 807 | 352 | 5 | 7 | 811 | 8 | 808 | 0.0 | 925 |
| MS.gene017341.t1 | AT5G49190 | 57.645 | 739 | 312 | 1 | 73 | 811 | 3 | 740 | 0.0 | 918 |
| MS.gene017341.t1 | AT3G43190 | 54.827 | 808 | 357 | 5 | 6 | 811 | 7 | 808 | 0.0 | 915 |
| MS.gene017341.t1 | AT3G43190 | 54.827 | 808 | 357 | 5 | 6 | 811 | 7 | 808 | 0.0 | 915 |
| MS.gene017341.t1 | AT5G11110 | 26.384 | 542 | 321 | 22 | 283 | 781 | 177 | 683 | 5.89e-34 | 141 |
| MS.gene017341.t1 | AT5G20280 | 25.140 | 537 | 329 | 19 | 283 | 776 | 170 | 676 | 4.86e-33 | 138 |
| MS.gene017341.t1 | AT4G10120 | 24.756 | 513 | 321 | 17 | 283 | 758 | 23 | 507 | 9.71e-33 | 137 |
| MS.gene017341.t1 | AT4G10120 | 25.000 | 516 | 316 | 18 | 283 | 758 | 197 | 681 | 1.90e-32 | 136 |
| MS.gene017341.t1 | AT4G10120 | 25.000 | 516 | 316 | 18 | 283 | 758 | 197 | 681 | 1.90e-32 | 136 |
| MS.gene017341.t1 | AT4G10120 | 25.000 | 516 | 316 | 18 | 283 | 758 | 197 | 681 | 1.90e-32 | 136 |
| MS.gene017341.t1 | AT4G10120 | 24.390 | 492 | 309 | 15 | 302 | 758 | 17 | 480 | 2.49e-31 | 132 |
| MS.gene017341.t1 | AT1G04920 | 25.137 | 549 | 339 | 22 | 258 | 758 | 138 | 662 | 2.83e-31 | 132 |
Find 181 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAGTTCATGGTTATTT+TGG | 0.070641 | 5.1:+59878162 | MS.gene017341:CDS |
| TGCAAACAAGTTGGTAAATA+TGG | 0.130999 | 5.1:+59880949 | MS.gene017341:CDS |
| TAATTTCTTATTCAAGAATT+TGG | 0.152548 | 5.1:+59881048 | MS.gene017341:CDS |
| GAAGAAGACAAGGTTAATTT+AGG | 0.178184 | 5.1:-59877416 | None:intergenic |
| GGATGCAGCAACCAAGATTT+TGG | 0.185147 | 5.1:+59879097 | MS.gene017341:intron |
| GGCCTATGTAGAGTTGTTTC+TGG | 0.186575 | 5.1:+59879648 | MS.gene017341:CDS |
| CTTGCCATCGAGAAGATTAT+TGG | 0.212816 | 5.1:-59880232 | None:intergenic |
| ATTCCTTTCTCTGTATTAAA+AGG | 0.218868 | 5.1:-59878827 | None:intergenic |
| GACTTTGGAGCATTTGATAT+TGG | 0.226670 | 5.1:+59877389 | MS.gene017341:CDS |
| TGACATGAGAAGTGATATTT+AGG | 0.235805 | 5.1:-59879394 | None:intergenic |
| CAAACCTTCCAGCAATTTCT+TGG | 0.245784 | 5.1:-59879474 | None:intergenic |
| TTCAAGGACAACTGGAAAAT+TGG | 0.245819 | 5.1:+59877478 | MS.gene017341:CDS |
| GGTTATTACTTGGAGCTTAA+TGG | 0.249918 | 5.1:+59881889 | MS.gene017341:intron |
| GGGAAGCCAGATCTTGTTAT+TGG | 0.282391 | 5.1:+59879131 | MS.gene017341:CDS |
| ATCACTACTTTGAAAATTGT+TGG | 0.288854 | 5.1:-59878138 | None:intergenic |
| AAATTTGGTAGCATCATTAA+TGG | 0.291041 | 5.1:+59879169 | MS.gene017341:CDS |
| GGTTGCTTGCCAACTGGTTT+TGG | 0.291946 | 5.1:-59881214 | None:intergenic |
| TGGGGAGCACTTACACCTTT+TGG | 0.294971 | 5.1:+59880969 | MS.gene017341:CDS |
| CATATGTAGCCTTTGCAATT+AGG | 0.299383 | 5.1:+59876779 | MS.gene017341:CDS |
| CATTTCCAGGTTGAAGGATT+GGG | 0.305291 | 5.1:+59877999 | MS.gene017341:intron |
| CATGAAACTTCATGAATTAA+TGG | 0.308219 | 5.1:+59876416 | MS.gene017341:CDS |
| CATGCTGCGTTTACTCTTCC+AGG | 0.312522 | 5.1:+59879627 | MS.gene017341:CDS |
| CTTCCTTTCAGGTTATTACT+TGG | 0.312619 | 5.1:+59881879 | MS.gene017341:intron |
| ACTTTGGAGCATTTGATATT+GGG | 0.313644 | 5.1:+59877390 | MS.gene017341:CDS |
| AAATTACACAGATGGAAATT+TGG | 0.316028 | 5.1:+59879154 | MS.gene017341:CDS |
| TTAACCTTGTCTTCTTCAAT+TGG | 0.317572 | 5.1:+59877422 | MS.gene017341:CDS |
| TTGTCTTCTTCAATTGGAAA+TGG | 0.326217 | 5.1:+59877428 | MS.gene017341:CDS |
| CCTGCTTTGTATGAAGCATT+TGG | 0.338153 | 5.1:+59880529 | MS.gene017341:CDS |
| TTTGGGCAAGCAGATGTTCT+TGG | 0.338987 | 5.1:+59878180 | MS.gene017341:CDS |
| AAATGAAAGAAATTATGTTT+TGG | 0.349393 | 5.1:+59876467 | MS.gene017341:CDS |
| GTAGTGATCTTCTCAGTTCA+TGG | 0.349932 | 5.1:+59878153 | MS.gene017341:CDS |
| TTCCATTAGGTCCAAAATCT+TGG | 0.351148 | 5.1:-59879108 | None:intergenic |
| TTTCAAAGTTCTTAACTTCA+AGG | 0.358243 | 5.1:+59877462 | MS.gene017341:CDS |
| ACAACAGGTAGTTTACATAT+TGG | 0.359818 | 5.1:+59878546 | MS.gene017341:intron |
| ACACCCTTTCCTTGAATTTG+AGG | 0.366684 | 5.1:-59876879 | None:intergenic |
| TTCTTAACTTCAAGGACAAC+TGG | 0.367621 | 5.1:+59877470 | MS.gene017341:CDS |
| GCAAAGTAGACCCATCATAT+TGG | 0.374838 | 5.1:+59880710 | MS.gene017341:CDS |
| ATCAAAAGATAGAGAGGAAA+TGG | 0.388957 | 5.1:+59880366 | MS.gene017341:CDS |
| TAAAGAATTTGTCCGCTTCA+AGG | 0.389301 | 5.1:-59876307 | None:intergenic |
| GGAGGTTCATCACTTGGAAT+AGG | 0.389616 | 5.1:-59881193 | None:intergenic |
| ATAAGAAATTATAGAACATA+TGG | 0.396630 | 5.1:-59881036 | None:intergenic |
| AGCAATTTCTTGGTATGTAC+TGG | 0.397249 | 5.1:-59879464 | None:intergenic |
| TCACTTCTCATGTCAATTCA+TGG | 0.397520 | 5.1:+59879402 | MS.gene017341:CDS |
| GCAAACAAGTTGGTAAATAT+GGG | 0.400709 | 5.1:+59880950 | MS.gene017341:CDS |
| ATTTCCAGGTTCACAGGATC+CGG | 0.402834 | 5.1:-59878099 | None:intergenic |
| TCATTAATGGCTAGAAAACT+TGG | 0.403919 | 5.1:+59879182 | MS.gene017341:CDS |
| CAATTTCATTTCCAGGTTGA+AGG | 0.411074 | 5.1:+59877993 | MS.gene017341:intron |
| TTAGGCCTAATCCAGGAGTC+TGG | 0.411626 | 5.1:+59876797 | MS.gene017341:CDS |
| TTCATTTATGCGCTGCAATC+CGG | 0.411646 | 5.1:-59880749 | None:intergenic |
| TCATTTCCAGGTTGAAGGAT+TGG | 0.413551 | 5.1:+59877998 | MS.gene017341:intron |
| CTTTATCTTGTAGCTATACA+TGG | 0.413751 | 5.1:+59880918 | MS.gene017341:intron |
| TAGCAAAGCACTTCTTCATA+TGG | 0.418506 | 5.1:-59876368 | None:intergenic |
| ATAATTGTTGATGGTGTCTC+AGG | 0.422446 | 5.1:+59880622 | MS.gene017341:CDS |
| TTTACCTGGCCACCAGTGTC+TGG | 0.422921 | 5.1:-59878207 | None:intergenic |
| GATCTGGCTTCCCTTCCATT+AGG | 0.423211 | 5.1:-59879121 | None:intergenic |
| TGATCCTTCTCCCTTTCTCT+AGG | 0.427018 | 5.1:-59876395 | None:intergenic |
| TAATTTCCAATAACAAGATC+TGG | 0.429386 | 5.1:-59879137 | None:intergenic |
| CAATGTGGATTGTGAACGTC+TGG | 0.431421 | 5.1:-59881776 | None:intergenic |
| ACGTAGAATGTGAGAGTGTT+TGG | 0.432164 | 5.1:-59878801 | None:intergenic |
| TGTTATCTACTTTGTTAAAG+AGG | 0.432624 | 5.1:-59879791 | None:intergenic |
| AATGCATTTGAAGCAGACTT+TGG | 0.434330 | 5.1:+59877374 | MS.gene017341:CDS |
| GAAATCACGTTCCAATATGA+TGG | 0.435511 | 5.1:-59880721 | None:intergenic |
| CTTCTTCCAAAGCCTTGACT+TGG | 0.437629 | 5.1:-59878570 | None:intergenic |
| ATTGGACCAAGTCAAGGCTT+TGG | 0.438859 | 5.1:+59878564 | MS.gene017341:CDS |
| CTACTCTGCTTCAATGCATC+AGG | 0.439087 | 5.1:-59876342 | None:intergenic |
| AGATAATGCAGGAAGGGTGA+AGG | 0.439483 | 5.1:+59878041 | MS.gene017341:CDS |
| ACTTAAGCGGGTTAGTTGAA+TGG | 0.440702 | 5.1:+59880272 | MS.gene017341:CDS |
| TTCAAACTCCTGGTGGCACT+TGG | 0.442030 | 5.1:-59878765 | None:intergenic |
| GCCTATGTAGAGTTGTTTCT+GGG | 0.445424 | 5.1:+59879649 | MS.gene017341:CDS |
| CGATGCATTGCTGACTCAAA+GGG | 0.446727 | 5.1:+59880493 | MS.gene017341:CDS |
| CCATCAACAATTATTTCTGC+TGG | 0.448191 | 5.1:-59880613 | None:intergenic |
| AGACTCACCACAAGAATTTG+AGG | 0.449816 | 5.1:-59878634 | None:intergenic |
| CTTGCCAGACACTGGTGGCC+AGG | 0.463571 | 5.1:+59878203 | MS.gene017341:CDS |
| ATTTCCAGGTTGAAGGATTG+GGG | 0.463666 | 5.1:+59878000 | MS.gene017341:intron |
| TTTGTTAACTTGCTTCCAAA+AGG | 0.466022 | 5.1:-59880984 | None:intergenic |
| GAGTAAACCTCTCAAGATAA+GGG | 0.468220 | 5.1:-59878883 | None:intergenic |
| GTGAACCTTGTCATAGTTGG+TGG | 0.468895 | 5.1:+59880325 | MS.gene017341:CDS |
| CACTTGGTTCCTCTAGCATC+AGG | 0.470322 | 5.1:-59878749 | None:intergenic |
| AGAGTTGGTTGCTTGCCAAC+TGG | 0.472054 | 5.1:-59881220 | None:intergenic |
| TACTCCCAGACTCCTGGATT+AGG | 0.474616 | 5.1:-59876802 | None:intergenic |
| GGTTCACAGGATCCGGAGCT+TGG | 0.476030 | 5.1:-59878092 | None:intergenic |
| CACAGATTACCTCAAATTCA+AGG | 0.476544 | 5.1:+59876870 | MS.gene017341:CDS |
| GTCCGCTTCAAGGTATGTGT+TGG | 0.479582 | 5.1:-59876297 | None:intergenic |
| CGTACATACTCCCAGACTCC+TGG | 0.479613 | 5.1:-59876808 | None:intergenic |
| CTTGAATTTGAGGTAATCTG+TGG | 0.479667 | 5.1:-59876869 | None:intergenic |
| TGAGTAAACCTCTCAAGATA+AGG | 0.482349 | 5.1:-59878884 | None:intergenic |
| AGAAAGGAATCTTGCGCCAA+TGG | 0.483395 | 5.1:+59878840 | MS.gene017341:CDS |
| AAGAGGAGATCTTCAATAGC+AGG | 0.484163 | 5.1:-59879774 | None:intergenic |
| AGTACATACCAAGAAATTGC+TGG | 0.486522 | 5.1:+59879466 | MS.gene017341:CDS |
| AAAGGATGGGGAGATAATGC+AGG | 0.486672 | 5.1:+59878030 | MS.gene017341:CDS |
| GAAAGGAATCTTGCGCCAAT+GGG | 0.490101 | 5.1:+59878841 | MS.gene017341:CDS |
| CCAGCAGAAATAATTGTTGA+TGG | 0.490757 | 5.1:+59880613 | MS.gene017341:CDS |
| ATGAAGACTCAGATGTTAAG+TGG | 0.491444 | 5.1:+59879359 | MS.gene017341:CDS |
| GTTCACAATCCACATTGAAA+AGG | 0.494536 | 5.1:+59881782 | MS.gene017341:CDS |
| AGCTCCGGATCCTGTGAACC+TGG | 0.494693 | 5.1:+59878095 | MS.gene017341:CDS |
| CTAATTGCAAAGGCTACATA+TGG | 0.497187 | 5.1:-59876778 | None:intergenic |
| AGGTGAAGCTATATTGAACT+TGG | 0.506881 | 5.1:-59879688 | None:intergenic |
| GAGCCTTGTTGTTTGAGAGT+TGG | 0.508078 | 5.1:-59881235 | None:intergenic |
| GTTATTGGAAATTACACAGA+TGG | 0.508428 | 5.1:+59879146 | MS.gene017341:CDS |
| CATTGATAGCTTCAAACTCC+TGG | 0.511650 | 5.1:-59878775 | None:intergenic |
| TTGAATTTGAGGTAATCTGT+GGG | 0.512878 | 5.1:-59876868 | None:intergenic |
| CTTGATTCATCTCCATTGAG+AGG | 0.513096 | 5.1:-59880658 | None:intergenic |
| AGCGGGTTAGTTGAATGGTA+TGG | 0.513516 | 5.1:+59880277 | MS.gene017341:CDS |
| TTACCTCAAATTCAAGGAAA+GGG | 0.515471 | 5.1:+59876876 | MS.gene017341:CDS |
| GTTCTTGGCTTGCCAGACAC+TGG | 0.515609 | 5.1:+59878195 | MS.gene017341:CDS |
| TGTACTGGTTATGATGAAAT+CGG | 0.521627 | 5.1:-59879449 | None:intergenic |
| ATCAGAAGTACTCCAAGCTC+CGG | 0.522664 | 5.1:+59878080 | MS.gene017341:CDS |
| TTCCACATTGATCCTCTCAA+TGG | 0.523550 | 5.1:+59880646 | MS.gene017341:CDS |
| GGCAAAAGCACAGACTATAG+TGG | 0.530206 | 5.1:+59877499 | MS.gene017341:CDS |
| CTTAACTTTGACAGGTAACA+AGG | 0.533143 | 5.1:+59878720 | MS.gene017341:intron |
| TTTGCTAAGTACCTAGAGAA+AGG | 0.536077 | 5.1:+59876384 | MS.gene017341:CDS |
| CCTTGATTAGTAGCAAAAGT+TGG | 0.536164 | 5.1:-59880586 | None:intergenic |
| ATTACCTCAAATTCAAGGAA+AGG | 0.536681 | 5.1:+59876875 | MS.gene017341:CDS |
| TTGGTGAACCTTGTCATAGT+TGG | 0.540805 | 5.1:+59880322 | MS.gene017341:CDS |
| CTCGGCTGCAAAGCTTCAGA+TGG | 0.543389 | 5.1:+59877685 | MS.gene017341:CDS |
| TCGATGCATTGCTGACTCAA+AGG | 0.544831 | 5.1:+59880492 | MS.gene017341:CDS |
| GCATGGCTTTCATACTGTCC+AGG | 0.545183 | 5.1:-59879609 | None:intergenic |
| GAAACAACTCTACATAGGCC+TGG | 0.545252 | 5.1:-59879645 | None:intergenic |
| CTCTCAAACAACAAGGCTCT+AGG | 0.545501 | 5.1:+59881239 | MS.gene017341:CDS |
| GAAGATATATGCAAACAAGT+TGG | 0.545929 | 5.1:+59880940 | MS.gene017341:CDS |
| ATGTTGTGAAGAACTTAAGC+GGG | 0.548780 | 5.1:+59880260 | MS.gene017341:CDS |
| TCATGAATTAATGGAAGAAG+TGG | 0.551105 | 5.1:+59876425 | MS.gene017341:CDS |
| TTCAAAATCAAAAGATAGAG+AGG | 0.553369 | 5.1:+59880360 | MS.gene017341:CDS |
| CTTGGCTTGCCAGACACTGG+TGG | 0.554446 | 5.1:+59878198 | MS.gene017341:CDS |
| TAGGCCTAATCCAGGAGTCT+GGG | 0.556349 | 5.1:+59876798 | MS.gene017341:CDS |
| TTGTTGAAACTAAATCATCA+TGG | 0.559548 | 5.1:+59877527 | MS.gene017341:CDS |
| TTTCCAGGTTGAAGGATTGG+GGG | 0.562858 | 5.1:+59878001 | MS.gene017341:intron |
| AACTAAAGGGACAATTCAGA+TGG | 0.563580 | 5.1:+59880428 | MS.gene017341:CDS |
| TTATCTTGAGAGGTTTACTC+AGG | 0.564285 | 5.1:+59878886 | MS.gene017341:CDS |
| TTATAAACCTCAAATTCTTG+TGG | 0.564326 | 5.1:+59878627 | MS.gene017341:CDS |
| TTTGCAATTAGGCCTAATCC+AGG | 0.566483 | 5.1:+59876790 | MS.gene017341:CDS |
| CAATAATCTTCTCGATGGCA+AGG | 0.566855 | 5.1:+59880233 | MS.gene017341:CDS |
| GATAAATGACACGTTGAGCT+CGG | 0.568356 | 5.1:+59877667 | MS.gene017341:CDS |
| TTGCTAAGTACCTAGAGAAA+GGG | 0.568510 | 5.1:+59876385 | MS.gene017341:CDS |
| ATTGCAAAGGCTACATATGG+TGG | 0.571806 | 5.1:-59876775 | None:intergenic |
| CCAAATGCTTCATACAAAGC+AGG | 0.573499 | 5.1:-59880529 | None:intergenic |
| GATTGCAGCGCATAAATGAA+TGG | 0.573820 | 5.1:+59880752 | MS.gene017341:CDS |
| ACATTTACCCTTATCTTGAG+AGG | 0.575762 | 5.1:+59878876 | MS.gene017341:CDS |
| GAATAAGAGACTAAGAAACT+TGG | 0.575984 | 5.1:+59880303 | MS.gene017341:CDS |
| CTTTATATTGAGCTCTACAC+AGG | 0.580216 | 5.1:+59876503 | MS.gene017341:CDS |
| GTGGATATCTAGCAGAGAAG+AGG | 0.585549 | 5.1:+59880206 | MS.gene017341:intron |
| TAGAGGAACCAAGTGCCACC+AGG | 0.586416 | 5.1:+59878757 | MS.gene017341:CDS |
| CATTAATGGCTAGAAAACTT+GGG | 0.588048 | 5.1:+59879183 | MS.gene017341:CDS |
| TTACATATTGGACCAAGTCA+AGG | 0.590231 | 5.1:+59878558 | MS.gene017341:CDS |
| TGGAACGTGATTTCTGCGGC+CGG | 0.591424 | 5.1:+59880730 | MS.gene017341:CDS |
| ATGGGGAGATAATGCAGGAA+GGG | 0.592050 | 5.1:+59878035 | MS.gene017341:CDS |
| AAATCACGTTCCAATATGAT+GGG | 0.592482 | 5.1:-59880720 | None:intergenic |
| GAAACCAATAATCTTCTCGA+TGG | 0.592864 | 5.1:+59880228 | MS.gene017341:CDS |
| GATGGGGAGATAATGCAGGA+AGG | 0.601426 | 5.1:+59878034 | MS.gene017341:CDS |
| TACTAAGAATTAAGCAACAA+GGG | 0.601632 | 5.1:+59878599 | MS.gene017341:CDS |
| TGTCGAAGCGAGACACCCAT+TGG | 0.604105 | 5.1:-59878856 | None:intergenic |
| CTGGAAGAGTAAACGCAGCA+TGG | 0.606842 | 5.1:-59879626 | None:intergenic |
| TAGAAAACTTGGGATAACTC+AGG | 0.607985 | 5.1:+59879193 | MS.gene017341:CDS |
| CAAACAAGTTGGTAAATATG+GGG | 0.608146 | 5.1:+59880951 | MS.gene017341:CDS |
| TGGATTAGGCCTAATTGCAA+AGG | 0.614592 | 5.1:-59876788 | None:intergenic |
| ATTTCCAATTGAAGAAGACA+AGG | 0.616302 | 5.1:-59877426 | None:intergenic |
| CTCAGAGGACCTCTCTGTTG+AGG | 0.621036 | 5.1:+59876837 | MS.gene017341:CDS |
| GGTGAAGCTATATTGAACTT+GGG | 0.621197 | 5.1:-59879687 | None:intergenic |
| AGTACCTAGAGAAAGGGAGA+AGG | 0.621869 | 5.1:+59876391 | MS.gene017341:CDS |
| GATGTTGTGAAGAACTTAAG+CGG | 0.622437 | 5.1:+59880259 | MS.gene017341:CDS |
| AGTTAACAAAGAGCAAAATG+AGG | 0.623039 | 5.1:+59880997 | MS.gene017341:CDS |
| GATGAACCTCCAAAACCAGT+TGG | 0.627880 | 5.1:+59881205 | MS.gene017341:CDS |
| CAACCAACTCTCAAACAACA+AGG | 0.628977 | 5.1:+59881232 | MS.gene017341:CDS |
| AGAGGAGATCTTCAATAGCA+GGG | 0.629949 | 5.1:-59879773 | None:intergenic |
| TCCCAGAAACAACTCTACAT+AGG | 0.630829 | 5.1:-59879650 | None:intergenic |
| CTCCAACACATACCTTGAAG+CGG | 0.632080 | 5.1:+59876295 | MS.gene017341:CDS |
| AAGTTCAATATAGCTTCACC+TGG | 0.636766 | 5.1:+59879690 | MS.gene017341:CDS |
| TAGATACTTTGATCAGCACC+AGG | 0.643107 | 5.1:-59879708 | None:intergenic |
| GAATTTGAGGTAATCTGTGG+GGG | 0.644323 | 5.1:-59876866 | None:intergenic |
| CATACCAAGAAATTGCTGGA+AGG | 0.653894 | 5.1:+59879470 | MS.gene017341:CDS |
| ATACTAAGAATTAAGCAACA+AGG | 0.656208 | 5.1:+59878598 | MS.gene017341:CDS |
| TGATAGCTTCAAACTCCTGG+TGG | 0.660620 | 5.1:-59878772 | None:intergenic |
| TGAATTTGAGGTAATCTGTG+GGG | 0.661174 | 5.1:-59876867 | None:intergenic |
| CTCCATTGAGAGGATCAATG+TGG | 0.693616 | 5.1:-59880648 | None:intergenic |
| GTCATTGAAGCAATGAACTG+TGG | 0.697770 | 5.1:+59880559 | MS.gene017341:CDS |
| GTATGTACGTGTCAACTCAG+AGG | 0.705934 | 5.1:+59876822 | MS.gene017341:CDS |
| ATATTGGAACGTGATTTCTG+CGG | 0.707520 | 5.1:+59880726 | MS.gene017341:CDS |
| AGAAGCCACCAACTATGACA+AGG | 0.713700 | 5.1:-59880330 | None:intergenic |
| CAGACTGATCGATATCGCAA+CGG | 0.715302 | 5.1:+59880460 | MS.gene017341:CDS |
| GGGTGATAGCCTCAACAGAG+AGG | 0.723003 | 5.1:-59876846 | None:intergenic |
| AGGTTGATACCTGATGCTAG+AGG | 0.743701 | 5.1:+59878740 | MS.gene017341:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATATTAATAAATGAA+AGG | - | chr5.1:59879509-59879528 | None:intergenic | 10.0% |
| !! | ATTATAAGTATTAAGTAATA+AGG | + | chr5.1:59878258-59878277 | MS.gene017341:intron | 10.0% |
| !! | TAGATTTATTTATATAATCT+TGG | + | chr5.1:59881806-59881825 | MS.gene017341:intron | 10.0% |
| !!! | TTTTTTATATTTTGTCTAAT+AGG | + | chr5.1:59876528-59876547 | MS.gene017341:intron | 10.0% |
| !! | ACAAAAATAGAAAGAATTTA+CGG | - | chr5.1:59881660-59881679 | None:intergenic | 15.0% |
| !! | ATAAGAAATTATAGAACATA+TGG | - | chr5.1:59881039-59881058 | None:intergenic | 15.0% |
| !! | ATTAAAATTAATGTTCCTTA+TGG | - | chr5.1:59878240-59878259 | None:intergenic | 15.0% |
| !! | CAAATAAGAAAATATTGTTT+CGG | + | chr5.1:59881318-59881337 | MS.gene017341:intron | 15.0% |
| !! | TAATTTCTTATTCAAGAATT+TGG | + | chr5.1:59881048-59881067 | MS.gene017341:CDS | 15.0% |
| !! | TGTTAAATACATATTTAAGT+TGG | + | chr5.1:59881633-59881652 | MS.gene017341:intron | 15.0% |
| !! | TTATTAATTGTCTATTAAAG+AGG | + | chr5.1:59877787-59877806 | MS.gene017341:intron | 15.0% |
| !!! | AAATGAAAGAAATTATGTTT+TGG | + | chr5.1:59876467-59876486 | MS.gene017341:CDS | 15.0% |
| !!! | ATTCACTTTTGAAATTATTA+TGG | + | chr5.1:59880178-59880197 | MS.gene017341:intron | 15.0% |
| !!! | TTAACATTTTCTATATTGTA+GGG | + | chr5.1:59877340-59877359 | MS.gene017341:intron | 15.0% |
| !! | AAAACTCATTATGCAATAAT+TGG | - | chr5.1:59881113-59881132 | None:intergenic | 20.0% |
| !! | AAAAGTGAATATCAATCATT+TGG | - | chr5.1:59880168-59880187 | None:intergenic | 20.0% |
| !! | AACATAGCTAAAAACAAATT+TGG | - | chr5.1:59877813-59877832 | None:intergenic | 20.0% |
| !! | AATTGAAAAACATCAACTAA+AGG | + | chr5.1:59880414-59880433 | MS.gene017341:CDS | 20.0% |
| !! | AGAAACACATAAATCTTATA+AGG | - | chr5.1:59881482-59881501 | None:intergenic | 20.0% |
| !! | AGATATGATTTACCATATAA+AGG | - | chr5.1:59881398-59881417 | None:intergenic | 20.0% |
| !! | ATTGAAAAACATCAACTAAA+GGG | + | chr5.1:59880415-59880434 | MS.gene017341:CDS | 20.0% |
| !! | TTATAAGATTTATGTGTTTC+TGG | + | chr5.1:59881481-59881500 | MS.gene017341:intron | 20.0% |
| !!! | AAAATTAATTTTCTTGCTGA+TGG | - | chr5.1:59880884-59880903 | None:intergenic | 20.0% |
| !!! | ATTAAAGCGTCTTATAAAAA+TGG | - | chr5.1:59880813-59880832 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTAGAATTTGAG+AGG | + | chr5.1:59881276-59881295 | MS.gene017341:intron | 20.0% |
| !!! | CTTAACATTTTCTATATTGT+AGG | + | chr5.1:59877339-59877358 | MS.gene017341:intron | 20.0% |
| !!! | TTTAGCTATGTTTAAAATCT+CGG | + | chr5.1:59877821-59877840 | MS.gene017341:intron | 20.0% |
| ! | AAAAACTTAGTATTACTAGC+TGG | + | chr5.1:59878482-59878501 | MS.gene017341:intron | 25.0% |
| ! | AAAGAATATGTAACTGTTGT+TGG | - | chr5.1:59877600-59877619 | None:intergenic | 25.0% |
| ! | AAAGTTCATAAGAGTGAAAA+AGG | - | chr5.1:59879045-59879064 | None:intergenic | 25.0% |
| ! | AAATTACACAGATGGAAATT+TGG | + | chr5.1:59879154-59879173 | MS.gene017341:CDS | 25.0% |
| ! | AATGTCTGTGATCAAAATTT+AGG | - | chr5.1:59877936-59877955 | None:intergenic | 25.0% |
| ! | AATGTTAAGCATCAAAAACA+AGG | - | chr5.1:59877328-59877347 | None:intergenic | 25.0% |
| ! | ATACTAAGAATTAAGCAACA+AGG | + | chr5.1:59878598-59878617 | MS.gene017341:CDS | 25.0% |
| ! | ATTAATATCAACCAAAGTGT+TGG | - | chr5.1:59879076-59879095 | None:intergenic | 25.0% |
| ! | ATTATACTCTTAACTTTGAC+AGG | + | chr5.1:59878712-59878731 | MS.gene017341:intron | 25.0% |
| ! | ATTCCTTTCTCTGTATTAAA+AGG | - | chr5.1:59878830-59878849 | None:intergenic | 25.0% |
| ! | CATATCAAAAATTTGAGCTA+AGG | + | chr5.1:59877756-59877775 | MS.gene017341:CDS | 25.0% |
| ! | CATGAAACTTCATGAATTAA+TGG | + | chr5.1:59876416-59876435 | MS.gene017341:CDS | 25.0% |
| ! | CCTTATTGTGATTGAAAATT+AGG | + | chr5.1:59879303-59879322 | MS.gene017341:intron | 25.0% |
| ! | CTGTTTGAATATCTTATGTA+AGG | + | chr5.1:59876972-59876991 | MS.gene017341:intron | 25.0% |
| ! | GAATAATCTCAACCTTTATA+TGG | + | chr5.1:59881383-59881402 | MS.gene017341:intron | 25.0% |
| ! | GTAATTATATACATCTGATG+TGG | + | chr5.1:59877876-59877895 | MS.gene017341:intron | 25.0% |
| ! | TAATTTCCAATAACAAGATC+TGG | - | chr5.1:59879140-59879159 | None:intergenic | 25.0% |
| ! | TACTAAGAATTAAGCAACAA+GGG | + | chr5.1:59878599-59878618 | MS.gene017341:CDS | 25.0% |
| ! | TACTATCATAGAATTTGAGT+TGG | - | chr5.1:59879967-59879986 | None:intergenic | 25.0% |
| ! | TGAAAGGGAAACTAAATAAA+GGG | - | chr5.1:59879236-59879255 | None:intergenic | 25.0% |
| ! | TGAAATTATTATGGAAACAG+TGG | + | chr5.1:59880187-59880206 | MS.gene017341:intron | 25.0% |
| ! | TGTTAGCATGAAAAATCAAA+TGG | - | chr5.1:59881719-59881738 | None:intergenic | 25.0% |
| ! | TGTTATCTACTTTGTTAAAG+AGG | - | chr5.1:59879794-59879813 | None:intergenic | 25.0% |
| ! | TTATAAACCTCAAATTCTTG+TGG | + | chr5.1:59878627-59878646 | MS.gene017341:CDS | 25.0% |
| ! | TTCAAAATCAAAAGATAGAG+AGG | + | chr5.1:59880360-59880379 | MS.gene017341:CDS | 25.0% |
| ! | TTGAAAGGGAAACTAAATAA+AGG | - | chr5.1:59879237-59879256 | None:intergenic | 25.0% |
| ! | TTGTTGAAACTAAATCATCA+TGG | + | chr5.1:59877527-59877546 | MS.gene017341:CDS | 25.0% |
| ! | TTTCAAAGTTCTTAACTTCA+AGG | + | chr5.1:59877462-59877481 | MS.gene017341:CDS | 25.0% |
| !! | AAATTTGGTAGCATCATTAA+TGG | + | chr5.1:59879169-59879188 | MS.gene017341:CDS | 25.0% |
| !! | ACACTTTGGTTGATATTAAT+AGG | + | chr5.1:59879076-59879095 | MS.gene017341:intron | 25.0% |
| !! | ACATAAGATTTTATATGTCG+CGG | - | chr5.1:59877908-59877927 | None:intergenic | 25.0% |
| !! | ATCACTACTTTGAAAATTGT+TGG | - | chr5.1:59878141-59878160 | None:intergenic | 25.0% |
| !! | CCTAATTTTCAATCACAATA+AGG | - | chr5.1:59879306-59879325 | None:intergenic | 25.0% |
| !! | GAAAGACTTAAATTTTTGCT+TGG | - | chr5.1:59880117-59880136 | None:intergenic | 25.0% |
| !! | GTTAAGTGAATCTATCTTTT+TGG | - | chr5.1:59877306-59877325 | None:intergenic | 25.0% |
| !! | TAAATCTAACCTTTTCAATG+TGG | - | chr5.1:59881794-59881813 | None:intergenic | 25.0% |
| !! | TTTTCTATTACGGTAAAAAG+CGG | + | chr5.1:59878975-59878994 | MS.gene017341:intron | 25.0% |
| !! | TTTTGTCTTTTTCTGTGTAA+GGG | - | chr5.1:59879737-59879756 | None:intergenic | 25.0% |
| !!! | AGATTTTTTACCTTGTACTA+TGG | + | chr5.1:59878926-59878945 | MS.gene017341:intron | 25.0% |
| !!! | AGCAAGTGTTTTTTTTAGTA+AGG | - | chr5.1:59881861-59881880 | None:intergenic | 25.0% |
| !!! | CTCTATCTTTTGATTTTGAA+GGG | - | chr5.1:59880360-59880379 | None:intergenic | 25.0% |
| !!! | GAAAGAAATTATGTTTTGGA+GGG | + | chr5.1:59876471-59876490 | MS.gene017341:CDS | 25.0% |
| !!! | TCTCTATCTTTTGATTTTGA+AGG | - | chr5.1:59880361-59880380 | None:intergenic | 25.0% |
| !!! | TGAAAGAAATTATGTTTTGG+AGG | + | chr5.1:59876470-59876489 | MS.gene017341:CDS | 25.0% |
| !!! | TTAGCCTTTGAATTTTAATG+TGG | + | chr5.1:59876720-59876739 | MS.gene017341:intron | 25.0% |
| !!! | TTCTTTTTTCCTTTTCTTCT+TGG | + | chr5.1:59881744-59881763 | MS.gene017341:intron | 25.0% |
| !!! | TTTACAAACTGGTTTTGTAA+GGG | + | chr5.1:59880081-59880100 | MS.gene017341:intron | 25.0% |
| !!! | TTTCCCTTTCAATATTTTTG+TGG | + | chr5.1:59879245-59879264 | MS.gene017341:intron | 25.0% |
| !!! | TTTTGATATGAAGTGTCTTT+TGG | - | chr5.1:59877746-59877765 | None:intergenic | 25.0% |
| !!! | TTTTTGATTACTCAATGTGT+TGG | - | chr5.1:59876661-59876680 | None:intergenic | 25.0% |
| !!! | TTTTTTAAAGCTCTACTTGT+TGG | + | chr5.1:59877955-59877974 | MS.gene017341:intron | 25.0% |
| AAAAATATTTCCAGGTTCAC+AGG | - | chr5.1:59878108-59878127 | None:intergenic | 30.0% | |
| AAAAGTTTAATGTGCAAGTG+TGG | - | chr5.1:59879843-59879862 | None:intergenic | 30.0% | |
| AAAGTTTAATGTGCAAGTGT+GGG | - | chr5.1:59879842-59879861 | None:intergenic | 30.0% | |
| AAATCACGTTCCAATATGAT+GGG | - | chr5.1:59880723-59880742 | None:intergenic | 30.0% | |
| ACAACAGGTAGTTTACATAT+TGG | + | chr5.1:59878546-59878565 | MS.gene017341:intron | 30.0% | |
| AGTTAACAAAGAGCAAAATG+AGG | + | chr5.1:59880997-59881016 | MS.gene017341:CDS | 30.0% | |
| ATCAAAAGATAGAGAGGAAA+TGG | + | chr5.1:59880366-59880385 | MS.gene017341:CDS | 30.0% | |
| ATTACCTCAAATTCAAGGAA+AGG | + | chr5.1:59876875-59876894 | MS.gene017341:CDS | 30.0% | |
| ATTTCCAATTGAAGAAGACA+AGG | - | chr5.1:59877429-59877448 | None:intergenic | 30.0% | |
| CAACTTAAAACCATAGTACA+AGG | - | chr5.1:59878939-59878958 | None:intergenic | 30.0% | |
| CAGCCACAAAAATATTGAAA+GGG | - | chr5.1:59879251-59879270 | None:intergenic | 30.0% | |
| CAGGTAAAATTTCTACCATA+AGG | + | chr5.1:59878222-59878241 | MS.gene017341:intron | 30.0% | |
| CATATGTATGAATGTCAAGT+CGG | + | chr5.1:59881587-59881606 | MS.gene017341:intron | 30.0% | |
| CATTAATGGCTAGAAAACTT+GGG | + | chr5.1:59879183-59879202 | MS.gene017341:CDS | 30.0% | |
| CGAGTGTATATAGTCTAATT+TGG | - | chr5.1:59881446-59881465 | None:intergenic | 30.0% | |
| CTTTATCTTGTAGCTATACA+TGG | + | chr5.1:59880918-59880937 | MS.gene017341:intron | 30.0% | |
| GAAGAAGACAAGGTTAATTT+AGG | - | chr5.1:59877419-59877438 | None:intergenic | 30.0% | |
| GAAGATATATGCAAACAAGT+TGG | + | chr5.1:59880940-59880959 | MS.gene017341:CDS | 30.0% | |
| GAATAAGAGACTAAGAAACT+TGG | + | chr5.1:59880303-59880322 | MS.gene017341:CDS | 30.0% | |
| GTTATTGGAAATTACACAGA+TGG | + | chr5.1:59879146-59879165 | MS.gene017341:CDS | 30.0% | |
| TACAATTCTTCGCAATATCA+AGG | - | chr5.1:59877859-59877878 | None:intergenic | 30.0% | |
| TCAGCCACAAAAATATTGAA+AGG | - | chr5.1:59879252-59879271 | None:intergenic | 30.0% | |
| TCATGAATTAATGGAAGAAG+TGG | + | chr5.1:59876425-59876444 | MS.gene017341:CDS | 30.0% | |
| TCATTAATGGCTAGAAAACT+TGG | + | chr5.1:59879182-59879201 | MS.gene017341:CDS | 30.0% | |
| TGACATGAGAAGTGATATTT+AGG | - | chr5.1:59879397-59879416 | None:intergenic | 30.0% | |
| TGCACCACATTAAAATTCAA+AGG | - | chr5.1:59876727-59876746 | None:intergenic | 30.0% | |
| TGGAAATGAAATTGGCATTA+GGG | - | chr5.1:59877987-59878006 | None:intergenic | 30.0% | |
| TTAACCTTGTCTTCTTCAAT+TGG | + | chr5.1:59877422-59877441 | MS.gene017341:CDS | 30.0% | |
| TTAAGGATCACAATGCTATA+GGG | - | chr5.1:59878310-59878329 | None:intergenic | 30.0% | |
| TTACCTCAAATTCAAGGAAA+GGG | + | chr5.1:59876876-59876895 | MS.gene017341:CDS | 30.0% | |
| TTCTGCTGAAAAATATTTCC+AGG | - | chr5.1:59878116-59878135 | None:intergenic | 30.0% | |
| TTGTCTTCTTCAATTGGAAA+TGG | + | chr5.1:59877428-59877447 | MS.gene017341:CDS | 30.0% | |
| TTTCATTCTCTCCAATGTTA+AGG | - | chr5.1:59878327-59878346 | None:intergenic | 30.0% | |
| ! | AAGCGGTCTTTTATAAACAT+CGG | - | chr5.1:59877113-59877132 | None:intergenic | 30.0% |
| ! | CAATTTTCTTAACTGCACAA+AGG | - | chr5.1:59881692-59881711 | None:intergenic | 30.0% |
| ! | CTTATGGTAGAAATTTTACC+TGG | - | chr5.1:59878224-59878243 | None:intergenic | 30.0% |
| ! | CTTTTGTCTTTTTCTGTGTA+AGG | - | chr5.1:59879738-59879757 | None:intergenic | 30.0% |
| ! | GAATTTGGTTAGTCAATGTT+TGG | + | chr5.1:59881063-59881082 | MS.gene017341:intron | 30.0% |
| ! | GAGAAATGACATACCATTTT+TGG | - | chr5.1:59876909-59876928 | None:intergenic | 30.0% |
| ! | TTCTCAGTTCATGGTTATTT+TGG | + | chr5.1:59878162-59878181 | MS.gene017341:CDS | 30.0% |
| ! | TTGAATTTGAGGTAATCTGT+GGG | - | chr5.1:59876871-59876890 | None:intergenic | 30.0% |
| ! | TTTTTCTTGCATGTAGAAAG+AGG | - | chr5.1:59878675-59878694 | None:intergenic | 30.0% |
| !! | ACTTTGGAGCATTTGATATT+GGG | + | chr5.1:59877390-59877409 | MS.gene017341:CDS | 30.0% |
| !! | AGTGAATCTATCTTTTTGGT+AGG | - | chr5.1:59877302-59877321 | None:intergenic | 30.0% |
| !! | CAAAACATAGTTCTAAACTG+CGG | - | chr5.1:59879020-59879039 | None:intergenic | 30.0% |
| !! | CAAACAAGTTGGTAAATATG+GGG | + | chr5.1:59880951-59880970 | MS.gene017341:CDS | 30.0% |
| !! | GCAAACAAGTTGGTAAATAT+GGG | + | chr5.1:59880950-59880969 | MS.gene017341:CDS | 30.0% |
| !! | TCAATATTTTTGTGGCTGAA+AGG | + | chr5.1:59879253-59879272 | MS.gene017341:intron | 30.0% |
| !! | TCTCAGTTCATGGTTATTTT+GGG | + | chr5.1:59878163-59878182 | MS.gene017341:CDS | 30.0% |
| !! | TGCAAACAAGTTGGTAAATA+TGG | + | chr5.1:59880949-59880968 | MS.gene017341:CDS | 30.0% |
| !! | TGTACTGGTTATGATGAAAT+CGG | - | chr5.1:59879452-59879471 | None:intergenic | 30.0% |
| !! | TTTGTTAACTTGCTTCCAAA+AGG | - | chr5.1:59880987-59881006 | None:intergenic | 30.0% |
| !!! | CTTTACAAACTGGTTTTGTA+AGG | + | chr5.1:59880080-59880099 | MS.gene017341:intron | 30.0% |
| !!! | TGTAAACTACCTGTTGTTTT+TGG | - | chr5.1:59878543-59878562 | None:intergenic | 30.0% |
| AAAAACACTTGCTTCCTTTC+AGG | + | chr5.1:59881868-59881887 | MS.gene017341:intron | 35.0% | |
| AACTAAAGGGACAATTCAGA+TGG | + | chr5.1:59880428-59880447 | MS.gene017341:CDS | 35.0% | |
| AAGTTCAATATAGCTTCACC+TGG | + | chr5.1:59879690-59879709 | MS.gene017341:CDS | 35.0% | |
| AATCATCATGGAGAAGTAAG+TGG | + | chr5.1:59877539-59877558 | MS.gene017341:intron | 35.0% | |
| ACATTTACCCTTATCTTGAG+AGG | + | chr5.1:59878876-59878895 | MS.gene017341:CDS | 35.0% | |
| AGCAATTTCTTGGTATGTAC+TGG | - | chr5.1:59879467-59879486 | None:intergenic | 35.0% | |
| AGCATTGTGATCCTTAACAT+TGG | + | chr5.1:59878313-59878332 | MS.gene017341:intron | 35.0% | |
| AGCTACTAACTAATCTTTCG+AGG | - | chr5.1:59877172-59877191 | None:intergenic | 35.0% | |
| AGGTGAAGCTATATTGAACT+TGG | - | chr5.1:59879691-59879710 | None:intergenic | 35.0% | |
| AGTACATACCAAGAAATTGC+TGG | + | chr5.1:59879466-59879485 | MS.gene017341:CDS | 35.0% | |
| AGTCTACTTAAGATCCAATC+GGG | + | chr5.1:59879991-59880010 | MS.gene017341:intron | 35.0% | |
| ATATTGGAACGTGATTTCTG+CGG | + | chr5.1:59880726-59880745 | MS.gene017341:CDS | 35.0% | |
| ATGAAGACTCAGATGTTAAG+TGG | + | chr5.1:59879359-59879378 | MS.gene017341:CDS | 35.0% | |
| ATGTTGTGAAGAACTTAAGC+GGG | + | chr5.1:59880260-59880279 | MS.gene017341:CDS | 35.0% | |
| CAAAACCAGTTTGTAAAGTG+AGG | - | chr5.1:59880078-59880097 | None:intergenic | 35.0% | |
| CAAGGTTTAAGAAAGTCTTG+CGG | - | chr5.1:59878416-59878435 | None:intergenic | 35.0% | |
| CACAGATTACCTCAAATTCA+AGG | + | chr5.1:59876870-59876889 | MS.gene017341:CDS | 35.0% | |
| CATATGTAGCCTTTGCAATT+AGG | + | chr5.1:59876779-59876798 | MS.gene017341:CDS | 35.0% | |
| CCAGCAGAAATAATTGTTGA+TGG | + | chr5.1:59880613-59880632 | MS.gene017341:CDS | 35.0% | |
| CGACTTGACATTCATACATA+TGG | - | chr5.1:59881589-59881608 | None:intergenic | 35.0% | |
| CTAATGCCAATTTCATTTCC+AGG | + | chr5.1:59877986-59878005 | MS.gene017341:intron | 35.0% | |
| CTAATTGCAAAGGCTACATA+TGG | - | chr5.1:59876781-59876800 | None:intergenic | 35.0% | |
| CTAATTGTGACACAAAGAGT+TGG | - | chr5.1:59877044-59877063 | None:intergenic | 35.0% | |
| CTGGAAATGAAATTGGCATT+AGG | - | chr5.1:59877988-59878007 | None:intergenic | 35.0% | |
| CTTAACTTTGACAGGTAACA+AGG | + | chr5.1:59878720-59878739 | MS.gene017341:intron | 35.0% | |
| CTTCAACCTGGAAATGAAAT+TGG | - | chr5.1:59877995-59878014 | None:intergenic | 35.0% | |
| CTTTATATTGAGCTCTACAC+AGG | + | chr5.1:59876503-59876522 | MS.gene017341:CDS | 35.0% | |
| GAAACCAATAATCTTCTCGA+TGG | + | chr5.1:59880228-59880247 | MS.gene017341:CDS | 35.0% | |
| GAAATCACGTTCCAATATGA+TGG | - | chr5.1:59880724-59880743 | None:intergenic | 35.0% | |
| GAGTAAACCTCTCAAGATAA+GGG | - | chr5.1:59878886-59878905 | None:intergenic | 35.0% | |
| GAGTCTACTTAAGATCCAAT+CGG | + | chr5.1:59879990-59880009 | MS.gene017341:intron | 35.0% | |
| GATGTTGTGAAGAACTTAAG+CGG | + | chr5.1:59880259-59880278 | MS.gene017341:CDS | 35.0% | |
| GCGTCTTATAAAAATGGACA+AGG | - | chr5.1:59880807-59880826 | None:intergenic | 35.0% | |
| GGAGAGAATGAAATGTAATG+CGG | + | chr5.1:59878334-59878353 | MS.gene017341:intron | 35.0% | |
| GGTGAAGCTATATTGAACTT+GGG | - | chr5.1:59879690-59879709 | None:intergenic | 35.0% | |
| GTTAAGGATCACAATGCTAT+AGG | - | chr5.1:59878311-59878330 | None:intergenic | 35.0% | |
| GTTCACAATCCACATTGAAA+AGG | + | chr5.1:59881782-59881801 | MS.gene017341:CDS | 35.0% | |
| TAAAGAATTTGTCCGCTTCA+AGG | - | chr5.1:59876310-59876329 | None:intergenic | 35.0% | |
| TAGAAAACTTGGGATAACTC+AGG | + | chr5.1:59879193-59879212 | MS.gene017341:CDS | 35.0% | |
| TCACTTCTCATGTCAATTCA+TGG | + | chr5.1:59879402-59879421 | MS.gene017341:CDS | 35.0% | |
| TCTGTTAAAAGACTCGTTTG+AGG | + | chr5.1:59879862-59879881 | MS.gene017341:intron | 35.0% | |
| TGAGTAAACCTCTCAAGATA+AGG | - | chr5.1:59878887-59878906 | None:intergenic | 35.0% | |
| TGTCACAATTAGCAGATAAC+TGG | + | chr5.1:59877052-59877071 | MS.gene017341:intron | 35.0% | |
| TTACATATTGGACCAAGTCA+AGG | + | chr5.1:59878558-59878577 | MS.gene017341:CDS | 35.0% | |
| TTATCTTGAGAGGTTTACTC+AGG | + | chr5.1:59878886-59878905 | MS.gene017341:CDS | 35.0% | |
| TTCAAGGACAACTGGAAAAT+TGG | + | chr5.1:59877478-59877497 | MS.gene017341:CDS | 35.0% | |
| TTCCATTAGGTCCAAAATCT+TGG | - | chr5.1:59879111-59879130 | None:intergenic | 35.0% | |
| TTCTTAACTTCAAGGACAAC+TGG | + | chr5.1:59877470-59877489 | MS.gene017341:CDS | 35.0% | |
| TTGCTAAGTACCTAGAGAAA+GGG | + | chr5.1:59876385-59876404 | MS.gene017341:CDS | 35.0% | |
| TTGTGATACGTTAATGTCAC+AGG | + | chr5.1:59881159-59881178 | MS.gene017341:intron | 35.0% | |
| TTTATAAAAGACCGCTTGCT+AGG | + | chr5.1:59877116-59877135 | MS.gene017341:intron | 35.0% | |
| TTTCCTTCTTACCAACACTT+TGG | + | chr5.1:59879062-59879081 | MS.gene017341:intron | 35.0% | |
| TTTGCTAAGTACCTAGAGAA+AGG | + | chr5.1:59876384-59876403 | MS.gene017341:CDS | 35.0% | |
| TTTGTCGTAAGGATTGAGTT+AGG | + | chr5.1:59879940-59879959 | MS.gene017341:intron | 35.0% | |
| ! | AAAGGGTGTATGACCAAAAA+TGG | + | chr5.1:59876893-59876912 | MS.gene017341:CDS | 35.0% |
| ! | AACCAAGATTTTGGACCTAA+TGG | + | chr5.1:59879106-59879125 | MS.gene017341:CDS | 35.0% |
| ! | AAGATTTTGGACCTAATGGA+AGG | + | chr5.1:59879110-59879129 | MS.gene017341:CDS | 35.0% |
| ! | AATGCATTTGAAGCAGACTT+TGG | + | chr5.1:59877374-59877393 | MS.gene017341:CDS | 35.0% |
| ! | AGATTTTGGACCTAATGGAA+GGG | + | chr5.1:59879111-59879130 | MS.gene017341:CDS | 35.0% |
| ! | CAATTTCATTTCCAGGTTGA+AGG | + | chr5.1:59877993-59878012 | MS.gene017341:intron | 35.0% |
| ! | CGCTGCAAACTTTTCTATTA+CGG | + | chr5.1:59878965-59878984 | MS.gene017341:intron | 35.0% |
| ! | CTTACGACAAAAACTAGTCT+GGG | - | chr5.1:59879931-59879950 | None:intergenic | 35.0% |
| ! | CTTGAATTTGAGGTAATCTG+TGG | - | chr5.1:59876872-59876891 | None:intergenic | 35.0% |
| ! | CTTTTGTTGCCAAAAACAAC+AGG | + | chr5.1:59878531-59878550 | MS.gene017341:intron | 35.0% |
| ! | GTGCCTTTTAATACAGAGAA+AGG | + | chr5.1:59878824-59878843 | MS.gene017341:CDS | 35.0% |
| ! | GTTTCGGTATAAAGTGTCAT+AGG | + | chr5.1:59881334-59881353 | MS.gene017341:intron | 35.0% |
| ! | TAGCAAAGCACTTCTTCATA+TGG | - | chr5.1:59876371-59876390 | None:intergenic | 35.0% |
| ! | TGAATTTGAGGTAATCTGTG+GGG | - | chr5.1:59876870-59876889 | None:intergenic | 35.0% |
| ! | TGCTGATGGTGTACATAAAA+GGG | - | chr5.1:59880870-59880889 | None:intergenic | 35.0% |
| ! | TTACGACAAAAACTAGTCTG+GGG | - | chr5.1:59879930-59879949 | None:intergenic | 35.0% |
| ! | TTGCTGATGGTGTACATAAA+AGG | - | chr5.1:59880871-59880890 | None:intergenic | 35.0% |
| !! | ATAATTGTTGATGGTGTCTC+AGG | + | chr5.1:59880622-59880641 | MS.gene017341:CDS | 35.0% |
| !! | CCATCAACAATTATTTCTGC+TGG | - | chr5.1:59880616-59880635 | None:intergenic | 35.0% |
| !! | CTTCCTTTCAGGTTATTACT+TGG | + | chr5.1:59881879-59881898 | MS.gene017341:intron | 35.0% |
| !! | GACTTTGGAGCATTTGATAT+TGG | + | chr5.1:59877389-59877408 | MS.gene017341:CDS | 35.0% |
| !! | TGGCAACAAAAGTGTTAGAA+AGG | - | chr5.1:59878523-59878542 | None:intergenic | 35.0% |
| !!! | TATGTTTTGGAGGGAAATCT+TGG | + | chr5.1:59876480-59876499 | MS.gene017341:CDS | 35.0% |
| AAGACTCGTTTGAGGAGATA+AGG | + | chr5.1:59879870-59879889 | MS.gene017341:intron | 40.0% | |
| AAGAGGAGATCTTCAATAGC+AGG | - | chr5.1:59879777-59879796 | None:intergenic | 40.0% | |
| ACAAGGAAACATCTCAAGAG+GGG | - | chr5.1:59880790-59880809 | None:intergenic | 40.0% | |
| ACACCCTTTCCTTGAATTTG+AGG | - | chr5.1:59876882-59876901 | None:intergenic | 40.0% | |
| ACAGTCCTCACTTTACAAAC+TGG | + | chr5.1:59880070-59880089 | MS.gene017341:intron | 40.0% | |
| AGACTCACCACAAGAATTTG+AGG | - | chr5.1:59878637-59878656 | None:intergenic | 40.0% | |
| AGAGGAGATCTTCAATAGCA+GGG | - | chr5.1:59879776-59879795 | None:intergenic | 40.0% | |
| ATTGCAAAGGCTACATATGG+TGG | - | chr5.1:59876778-59876797 | None:intergenic | 40.0% | |
| CAAACCTTCCAGCAATTTCT+TGG | - | chr5.1:59879477-59879496 | None:intergenic | 40.0% | |
| CAAAGATCTATGCAAGGAGA+TGG | - | chr5.1:59877147-59877166 | None:intergenic | 40.0% | |
| CAACCAACTCTCAAACAACA+AGG | + | chr5.1:59881232-59881251 | MS.gene017341:CDS | 40.0% | |
| CAATAATCTTCTCGATGGCA+AGG | + | chr5.1:59880233-59880252 | MS.gene017341:CDS | 40.0% | |
| CATACCAAGAAATTGCTGGA+AGG | + | chr5.1:59879470-59879489 | MS.gene017341:CDS | 40.0% | |
| CCAAATGCTTCATACAAAGC+AGG | - | chr5.1:59880532-59880551 | None:intergenic | 40.0% | |
| CCTTACGACAAAAACTAGTC+TGG | - | chr5.1:59879932-59879951 | None:intergenic | 40.0% | |
| CTTGATTCATCTCCATTGAG+AGG | - | chr5.1:59880661-59880680 | None:intergenic | 40.0% | |
| CTTGCCATCGAGAAGATTAT+TGG | - | chr5.1:59880235-59880254 | None:intergenic | 40.0% | |
| GACAAGGAAACATCTCAAGA+GGG | - | chr5.1:59880791-59880810 | None:intergenic | 40.0% | |
| GAGGTACAAAGATCTATGCA+AGG | - | chr5.1:59877153-59877172 | None:intergenic | 40.0% | |
| GATAAATGACACGTTGAGCT+CGG | + | chr5.1:59877667-59877686 | MS.gene017341:CDS | 40.0% | |
| GATTGCAGCGCATAAATGAA+TGG | + | chr5.1:59880752-59880771 | MS.gene017341:CDS | 40.0% | |
| GCAAAGTAGACCCATCATAT+TGG | + | chr5.1:59880710-59880729 | MS.gene017341:CDS | 40.0% | |
| GCTCCAAGTAATAACCTGAA+AGG | - | chr5.1:59881885-59881904 | None:intergenic | 40.0% | |
| GTAGTGATCTTCTCAGTTCA+TGG | + | chr5.1:59878153-59878172 | MS.gene017341:CDS | 40.0% | |
| GTCATTGAAGCAATGAACTG+TGG | + | chr5.1:59880559-59880578 | MS.gene017341:CDS | 40.0% | |
| TAGATACTTTGATCAGCACC+AGG | - | chr5.1:59879711-59879730 | None:intergenic | 40.0% | |
| TCCATACACAGACTTGACAA+TGG | + | chr5.1:59881518-59881537 | MS.gene017341:intron | 40.0% | |
| TCCCAGAAACAACTCTACAT+AGG | - | chr5.1:59879653-59879672 | None:intergenic | 40.0% | |
| TGCTGCAAACCAAGAAGAAA+AGG | - | chr5.1:59881756-59881775 | None:intergenic | 40.0% | |
| TGTCAAACACTGACATGTGT+CGG | + | chr5.1:59881610-59881629 | MS.gene017341:intron | 40.0% | |
| TGTCTCTGTGACTACAACTA+AGG | - | chr5.1:59878360-59878379 | None:intergenic | 40.0% | |
| TGTTTGTACCATACCACATG+AGG | + | chr5.1:59877243-59877262 | MS.gene017341:intron | 40.0% | |
| TTCATTTATGCGCTGCAATC+CGG | - | chr5.1:59880752-59880771 | None:intergenic | 40.0% | |
| TTCCACATTGATCCTCTCAA+TGG | + | chr5.1:59880646-59880665 | MS.gene017341:CDS | 40.0% | |
| TTGAAGTAGTGACACTGACA+AGG | - | chr5.1:59878434-59878453 | None:intergenic | 40.0% | |
| TTGGTGAACCTTGTCATAGT+TGG | + | chr5.1:59880322-59880341 | MS.gene017341:CDS | 40.0% | |
| TTTGCAATTAGGCCTAATCC+AGG | + | chr5.1:59876790-59876809 | MS.gene017341:CDS | 40.0% | |
| ! | ATTTCCAGGTTGAAGGATTG+GGG | + | chr5.1:59878000-59878019 | MS.gene017341:intron | 40.0% |
| ! | CATTGATAGCTTCAAACTCC+TGG | - | chr5.1:59878778-59878797 | None:intergenic | 40.0% |
| ! | CATTTCCAGGTTGAAGGATT+GGG | + | chr5.1:59877999-59878018 | MS.gene017341:intron | 40.0% |
| ! | CCTGCTTTGTATGAAGCATT+TGG | + | chr5.1:59880529-59880548 | MS.gene017341:CDS | 40.0% |
| ! | GAATTTGAGGTAATCTGTGG+GGG | - | chr5.1:59876869-59876888 | None:intergenic | 40.0% |
| ! | GATTTTATATGTCGCGGTTG+AGG | - | chr5.1:59877902-59877921 | None:intergenic | 40.0% |
| ! | TAACTGGTCTCTTAAGCATG+TGG | + | chr5.1:59877068-59877087 | MS.gene017341:intron | 40.0% |
| ! | TACTCAATGTGTTGGACTAG+TGG | - | chr5.1:59876653-59876672 | None:intergenic | 40.0% |
| ! | TCATTTCCAGGTTGAAGGAT+TGG | + | chr5.1:59877998-59878017 | MS.gene017341:intron | 40.0% |
| ! | TGGATTAGGCCTAATTGCAA+AGG | - | chr5.1:59876791-59876810 | None:intergenic | 40.0% |
| ! | TTTTGCAGCAAAGATAGACC+TGG | + | chr5.1:59879591-59879610 | MS.gene017341:intron | 40.0% |
| !! | ACGTAGAATGTGAGAGTGTT+TGG | - | chr5.1:59878804-59878823 | None:intergenic | 40.0% |
| !! | ACTTAAGCGGGTTAGTTGAA+TGG | + | chr5.1:59880272-59880291 | MS.gene017341:CDS | 40.0% |
| !! | CAACCAAAGTGTTGGTAAGA+AGG | - | chr5.1:59879068-59879087 | None:intergenic | 40.0% |
| !! | GCCTATGTAGAGTTGTTTCT+GGG | + | chr5.1:59879649-59879668 | MS.gene017341:CDS | 40.0% |
| !! | GGTTTTGTAAGGGTTGAGTT+AGG | + | chr5.1:59880091-59880110 | MS.gene017341:intron | 40.0% |
| !!! | CCAGACTAGTTTTTGTCGTA+AGG | + | chr5.1:59879929-59879948 | MS.gene017341:intron | 40.0% |
| !!! | TGTCTTTTGGAATTGCTGAG+AGG | - | chr5.1:59877733-59877752 | None:intergenic | 40.0% |
| AAAGGATGGGGAGATAATGC+AGG | + | chr5.1:59878030-59878049 | MS.gene017341:CDS | 45.0% | |
| AACATCTCAAGAGGGGACAT+AGG | - | chr5.1:59880783-59880802 | None:intergenic | 45.0% | |
| AAGGATTGGGGGTTTGAGAA+AGG | + | chr5.1:59878012-59878031 | MS.gene017341:CDS | 45.0% | |
| AGAAAGGAATCTTGCGCCAA+TGG | + | chr5.1:59878840-59878859 | MS.gene017341:CDS | 45.0% | |
| AGAAGCCACCAACTATGACA+AGG | - | chr5.1:59880333-59880352 | None:intergenic | 45.0% | |
| AGATAATGCAGGAAGGGTGA+AGG | + | chr5.1:59878041-59878060 | MS.gene017341:CDS | 45.0% | |
| AGTACCTAGAGAAAGGGAGA+AGG | + | chr5.1:59876391-59876410 | MS.gene017341:CDS | 45.0% | |
| ATGGGGAGATAATGCAGGAA+GGG | + | chr5.1:59878035-59878054 | MS.gene017341:CDS | 45.0% | |
| ATTGGACCAAGTCAAGGCTT+TGG | + | chr5.1:59878564-59878583 | MS.gene017341:CDS | 45.0% | |
| ATTGGGGGTTTGAGAAAGGA+TGG | + | chr5.1:59878016-59878035 | MS.gene017341:CDS | 45.0% | |
| ATTTCCAGGTTCACAGGATC+CGG | - | chr5.1:59878102-59878121 | None:intergenic | 45.0% | |
| CAGACTGATCGATATCGCAA+CGG | + | chr5.1:59880460-59880479 | MS.gene017341:CDS | 45.0% | |
| CATCAGAAACCAAGATGTCG+TGG | + | chr5.1:59878378-59878397 | MS.gene017341:intron | 45.0% | |
| CTACTCTGCTTCAATGCATC+AGG | - | chr5.1:59876345-59876364 | None:intergenic | 45.0% | |
| CTCCAACACATACCTTGAAG+CGG | + | chr5.1:59876295-59876314 | MS.gene017341:CDS | 45.0% | |
| CTCCATTGAGAGGATCAATG+TGG | - | chr5.1:59880651-59880670 | None:intergenic | 45.0% | |
| CTCTCAAACAACAAGGCTCT+AGG | + | chr5.1:59881239-59881258 | MS.gene017341:CDS | 45.0% | |
| CTTCTTCCAAAGCCTTGACT+TGG | - | chr5.1:59878573-59878592 | None:intergenic | 45.0% | |
| GAAACAACTCTACATAGGCC+TGG | - | chr5.1:59879648-59879667 | None:intergenic | 45.0% | |
| GAAAGGAATCTTGCGCCAAT+GGG | + | chr5.1:59878841-59878860 | MS.gene017341:CDS | 45.0% | |
| GATGAACCTCCAAAACCAGT+TGG | + | chr5.1:59881205-59881224 | MS.gene017341:CDS | 45.0% | |
| GCCATTGTCAAGTCTGTGTA+TGG | - | chr5.1:59881522-59881541 | None:intergenic | 45.0% | |
| GGACAAGGAAACATCTCAAG+AGG | - | chr5.1:59880792-59880811 | None:intergenic | 45.0% | |
| GGAGGTTCATCACTTGGAAT+AGG | - | chr5.1:59881196-59881215 | None:intergenic | 45.0% | |
| GTATGTACGTGTCAACTCAG+AGG | + | chr5.1:59876822-59876841 | MS.gene017341:CDS | 45.0% | |
| GTGAACCTTGTCATAGTTGG+TGG | + | chr5.1:59880325-59880344 | MS.gene017341:CDS | 45.0% | |
| GTGGATATCTAGCAGAGAAG+AGG | + | chr5.1:59880206-59880225 | MS.gene017341:intron | 45.0% | |
| TACCACATGAGGATCAGTGA+TGG | + | chr5.1:59877254-59877273 | MS.gene017341:intron | 45.0% | |
| TACCATCACTGATCCTCATG+TGG | - | chr5.1:59877259-59877278 | None:intergenic | 45.0% | |
| TCACAATGCTATAGGGATCG+TGG | - | chr5.1:59878303-59878322 | None:intergenic | 45.0% | |
| TCACTGATCCTCATGTGGTA+TGG | - | chr5.1:59877254-59877273 | None:intergenic | 45.0% | |
| TCGTTTGAGGAGATAAGGTC+AGG | + | chr5.1:59879875-59879894 | MS.gene017341:intron | 45.0% | |
| TGATAGCTTCAAACTCCTGG+TGG | - | chr5.1:59878775-59878794 | None:intergenic | 45.0% | |
| TGATCCTTCTCCCTTTCTCT+AGG | - | chr5.1:59876398-59876417 | None:intergenic | 45.0% | |
| TGTGGTGCATATGAACTTGC+AGG | + | chr5.1:59876738-59876757 | MS.gene017341:intron | 45.0% | |
| TTGGGGGTTTGAGAAAGGAT+GGG | + | chr5.1:59878017-59878036 | MS.gene017341:CDS | 45.0% | |
| TTTGGGCAAGCAGATGTTCT+TGG | + | chr5.1:59878180-59878199 | MS.gene017341:CDS | 45.0% | |
| ! | CAATGTGGATTGTGAACGTC+TGG | - | chr5.1:59881779-59881798 | None:intergenic | 45.0% |
| ! | GGATGCAGCAACCAAGATTT+TGG | + | chr5.1:59879097-59879116 | MS.gene017341:intron | 45.0% |
| ! | GGCAAAAGCACAGACTATAG+TGG | + | chr5.1:59877499-59877518 | MS.gene017341:CDS | 45.0% |
| ! | GGCCTATGTAGAGTTGTTTC+TGG | + | chr5.1:59879648-59879667 | MS.gene017341:CDS | 45.0% |
| ! | GGGAAGCCAGATCTTGTTAT+TGG | + | chr5.1:59879131-59879150 | MS.gene017341:CDS | 45.0% |
| ! | TTTCCAGGTTGAAGGATTGG+GGG | + | chr5.1:59878001-59878020 | MS.gene017341:intron | 45.0% |
| !! | AATGTGTTGGACTAGTGGTG+GGG | - | chr5.1:59876648-59876667 | None:intergenic | 45.0% |
| !! | AGCGGGTTAGTTGAATGGTA+TGG | + | chr5.1:59880277-59880296 | MS.gene017341:CDS | 45.0% |
| !! | AGGTTGATACCTGATGCTAG+AGG | + | chr5.1:59878740-59878759 | MS.gene017341:CDS | 45.0% |
| !! | ATCAGAAGTACTCCAAGCTC+CGG | + | chr5.1:59878080-59878099 | MS.gene017341:CDS | 45.0% |
| !! | CAATGTGTTGGACTAGTGGT+GGG | - | chr5.1:59876649-59876668 | None:intergenic | 45.0% |
| !! | CGATGCATTGCTGACTCAAA+GGG | + | chr5.1:59880493-59880512 | MS.gene017341:CDS | 45.0% |
| !! | GAGCCTTGTTGTTTGAGAGT+TGG | - | chr5.1:59881238-59881257 | None:intergenic | 45.0% |
| !! | TCAATGTGTTGGACTAGTGG+TGG | - | chr5.1:59876650-59876669 | None:intergenic | 45.0% |
| !! | TCGATGCATTGCTGACTCAA+AGG | + | chr5.1:59880492-59880511 | MS.gene017341:CDS | 45.0% |
| !!! | GGTTTTGGAGGTTCATCACT+TGG | - | chr5.1:59881202-59881221 | None:intergenic | 45.0% |
| AAACCCCCAATCCTTCAACC+TGG | - | chr5.1:59878007-59878026 | None:intergenic | 50.0% | |
| AAAGTCTTGCGGCTGCGATT+TGG | - | chr5.1:59878405-59878424 | None:intergenic | 50.0% | |
| AAGTCTTGCGGCTGCGATTT+GGG | - | chr5.1:59878404-59878423 | None:intergenic | 50.0% | |
| AGATGTCTAGTCTACGCGTG+AGG | + | chr5.1:59880032-59880051 | MS.gene017341:intron | 50.0% | |
| CACTTGGTTCCTCTAGCATC+AGG | - | chr5.1:59878752-59878771 | None:intergenic | 50.0% | |
| CATGCTGCGTTTACTCTTCC+AGG | + | chr5.1:59879627-59879646 | MS.gene017341:CDS | 50.0% | |
| CTGGAAGAGTAAACGCAGCA+TGG | - | chr5.1:59879629-59879648 | None:intergenic | 50.0% | |
| GATGGGGAGATAATGCAGGA+AGG | + | chr5.1:59878034-59878053 | MS.gene017341:CDS | 50.0% | |
| GATGTCTAGTCTACGCGTGA+GGG | + | chr5.1:59880033-59880052 | MS.gene017341:intron | 50.0% | |
| GCATGGCTTTCATACTGTCC+AGG | - | chr5.1:59879612-59879631 | None:intergenic | 50.0% | |
| GTCCGCTTCAAGGTATGTGT+TGG | - | chr5.1:59876300-59876319 | None:intergenic | 50.0% | |
| TAAGATCCAATCGGGCCACT+CGG | + | chr5.1:59879999-59880018 | MS.gene017341:intron | 50.0% | |
| TACTCCCAGACTCCTGGATT+AGG | - | chr5.1:59876805-59876824 | None:intergenic | 50.0% | |
| TAGGCCTAATCCAGGAGTCT+GGG | + | chr5.1:59876798-59876817 | MS.gene017341:CDS | 50.0% | |
| TGGGGGTTTGAGAAAGGATG+GGG | + | chr5.1:59878018-59878037 | MS.gene017341:CDS | 50.0% | |
| TTAGGCCTAATCCAGGAGTC+TGG | + | chr5.1:59876797-59876816 | MS.gene017341:CDS | 50.0% | |
| TTCAAACTCCTGGTGGCACT+TGG | - | chr5.1:59878768-59878787 | None:intergenic | 50.0% | |
| ! | AAAAGACCGCTTGCTAGGAG+AGG | + | chr5.1:59877121-59877140 | MS.gene017341:intron | 50.0% |
| ! | AGAGTTGGTTGCTTGCCAAC+TGG | - | chr5.1:59881223-59881242 | None:intergenic | 50.0% |
| ! | GATCTGGCTTCCCTTCCATT+AGG | - | chr5.1:59879124-59879143 | None:intergenic | 50.0% |
| !! | GGTTGCTTGCCAACTGGTTT+TGG | - | chr5.1:59881217-59881236 | None:intergenic | 50.0% |
| !!! | TGCTTGCCAACTGGTTTTGG+AGG | - | chr5.1:59881214-59881233 | None:intergenic | 50.0% |
| !!! | TGGGGAGCACTTACACCTTT+TGG | + | chr5.1:59880969-59880988 | MS.gene017341:CDS | 50.0% |
| AAGATCCAATCGGGCCACTC+GGG | + | chr5.1:59880000-59880019 | MS.gene017341:intron | 55.0% | |
| AGATGGCCTCTCCTAGCAAG+CGG | - | chr5.1:59877130-59877149 | None:intergenic | 55.0% | |
| CGTACATACTCCCAGACTCC+TGG | - | chr5.1:59876811-59876830 | None:intergenic | 55.0% | |
| CTCAGAGGACCTCTCTGTTG+AGG | + | chr5.1:59876837-59876856 | MS.gene017341:CDS | 55.0% | |
| CTCGGCTGCAAAGCTTCAGA+TGG | + | chr5.1:59877685-59877704 | MS.gene017341:CDS | 55.0% | |
| GGGTGATAGCCTCAACAGAG+AGG | - | chr5.1:59876849-59876868 | None:intergenic | 55.0% | |
| TAGAGGAACCAAGTGCCACC+AGG | + | chr5.1:59878757-59878776 | MS.gene017341:CDS | 55.0% | |
| TGGAACGTGATTTCTGCGGC+CGG | + | chr5.1:59880730-59880749 | MS.gene017341:CDS | 55.0% | |
| TGTCGAAGCGAGACACCCAT+TGG | - | chr5.1:59878859-59878878 | None:intergenic | 55.0% | |
| TTTACCTGGCCACCAGTGTC+TGG | - | chr5.1:59878210-59878229 | None:intergenic | 55.0% | |
| ! | CGATTTGGGCCACGACATCT+TGG | - | chr5.1:59878390-59878409 | None:intergenic | 55.0% |
| ! | GACTAGTGGTGGGGATCAAG+GGG | - | chr5.1:59876639-59876658 | None:intergenic | 55.0% |
| ! | GGACTAGTGGTGGGGATCAA+GGG | - | chr5.1:59876640-59876659 | None:intergenic | 55.0% |
| !! | GTTCTTGGCTTGCCAGACAC+TGG | + | chr5.1:59878195-59878214 | MS.gene017341:CDS | 55.0% |
| !! | TGGACTAGTGGTGGGGATCA+AGG | - | chr5.1:59876641-59876660 | None:intergenic | 55.0% |
| AGCTCCGGATCCTGTGAACC+TGG | + | chr5.1:59878095-59878114 | MS.gene017341:CDS | 60.0% | |
| CATCTGTAGCGTGACCCGAG+TGG | - | chr5.1:59880017-59880036 | None:intergenic | 60.0% | |
| GGTTCACAGGATCCGGAGCT+TGG | - | chr5.1:59878095-59878114 | None:intergenic | 60.0% | |
| ! | TACGCGTGAGGGTGTGTCAG+TGG | + | chr5.1:59880044-59880063 | MS.gene017341:intron | 60.0% |
| !! | CTTGGCTTGCCAGACACTGG+TGG | + | chr5.1:59878198-59878217 | MS.gene017341:CDS | 60.0% |
| CTTGCCAGACACTGGTGGCC+AGG | + | chr5.1:59878203-59878222 | MS.gene017341:CDS | 65.0% | |
| ! | GCGTGAGGGTGTGTCAGTGG+CGG | + | chr5.1:59880047-59880066 | MS.gene017341:intron | 65.0% |
| CGTGACCCGAGTGGCCCGAT+TGG | - | chr5.1:59880008-59880027 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 59876291 | 59881908 | 59876291 | ID=MS.gene017341 |
| chr5.1 | mRNA | 59876291 | 59881908 | 59876291 | ID=MS.gene017341.t1;Parent=MS.gene017341 |
| chr5.1 | exon | 59876291 | 59876524 | 59876291 | ID=MS.gene017341.t1.exon1;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59876291 | 59876524 | 59876291 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59876760 | 59876914 | 59876760 | ID=MS.gene017341.t1.exon2;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59876760 | 59876914 | 59876760 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59877361 | 59877553 | 59877361 | ID=MS.gene017341.t1.exon3;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59877361 | 59877553 | 59877361 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59877659 | 59877777 | 59877659 | ID=MS.gene017341.t1.exon4;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59877659 | 59877777 | 59877659 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59878008 | 59878224 | 59878008 | ID=MS.gene017341.t1.exon5;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59878008 | 59878224 | 59878008 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59878553 | 59878648 | 59878553 | ID=MS.gene017341.t1.exon6;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59878553 | 59878648 | 59878553 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59878734 | 59878907 | 59878734 | ID=MS.gene017341.t1.exon7;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59878734 | 59878907 | 59878734 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59879098 | 59879214 | 59879098 | ID=MS.gene017341.t1.exon8;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59879098 | 59879214 | 59879098 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59879325 | 59879491 | 59879325 | ID=MS.gene017341.t1.exon9;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59879325 | 59879491 | 59879325 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59879599 | 59879823 | 59879599 | ID=MS.gene017341.t1.exon10;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59879599 | 59879823 | 59879599 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59880207 | 59880773 | 59880207 | ID=MS.gene017341.t1.exon11;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59880207 | 59880773 | 59880207 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59880931 | 59881069 | 59880931 | ID=MS.gene017341.t1.exon12;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59880931 | 59881069 | 59880931 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59881181 | 59881260 | 59881181 | ID=MS.gene017341.t1.exon13;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59881181 | 59881260 | 59881181 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59881774 | 59881803 | 59881774 | ID=MS.gene017341.t1.exon14;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59881774 | 59881803 | 59881774 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| chr5.1 | exon | 59881890 | 59881908 | 59881890 | ID=MS.gene017341.t1.exon15;Parent=MS.gene017341.t1 |
| chr5.1 | CDS | 59881890 | 59881908 | 59881890 | ID=cds.MS.gene017341.t1;Parent=MS.gene017341.t1 |
| Gene Sequence |
| Protein sequence |
