Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07013.t1 | XP_013450380.1 | 98.4 | 809 | 13 | 0 | 1 | 809 | 1 | 809 | 0.00E+00 | 1616.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07013.t1 | O24301 | 93.6 | 808 | 47 | 2 | 1 | 804 | 1 | 807 | 0.0e+00 | 1540.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07013.t1 | A0A072U5L4 | 98.4 | 809 | 13 | 0 | 1 | 809 | 1 | 809 | 0.0e+00 | 1616.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene009541 | MS.gene07013 | PPI |
MS.gene07013 | MS.gene26175 | PPI |
MS.gene07013 | MS.gene063612 | PPI |
MS.gene008339 | MS.gene07013 | PPI |
MS.gene07013 | MS.gene05017 | PPI |
MS.gene07013 | MS.gene061567 | PPI |
MS.gene008335 | MS.gene07013 | PPI |
MS.gene049698 | MS.gene07013 | PPI |
MS.gene017341 | MS.gene07013 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07013.t1 | MTR_7g108930 | 98.393 | 809 | 13 | 0 | 1 | 809 | 1 | 809 | 0.0 | 1659 |
MS.gene07013.t1 | MTR_1g088170 | 86.375 | 800 | 106 | 1 | 1 | 797 | 1 | 800 | 0.0 | 1447 |
MS.gene07013.t1 | MTR_4g124660 | 70.756 | 807 | 233 | 3 | 1 | 806 | 1 | 805 | 0.0 | 1198 |
MS.gene07013.t1 | MTR_2g044070 | 69.776 | 804 | 241 | 2 | 5 | 807 | 2 | 804 | 0.0 | 1196 |
MS.gene07013.t1 | MTR_4g124660 | 70.745 | 752 | 217 | 3 | 1 | 751 | 1 | 750 | 0.0 | 1114 |
MS.gene07013.t1 | MTR_5g076830 | 55.791 | 803 | 351 | 2 | 9 | 807 | 9 | 811 | 0.0 | 954 |
MS.gene07013.t1 | MTR_3g064610 | 55.283 | 814 | 357 | 3 | 1 | 807 | 1 | 814 | 0.0 | 938 |
MS.gene07013.t1 | MTR_6g478000 | 50.376 | 798 | 322 | 4 | 13 | 806 | 15 | 742 | 0.0 | 785 |
MS.gene07013.t1 | MTR_6g478030 | 61.120 | 625 | 243 | 0 | 128 | 752 | 896 | 1520 | 0.0 | 783 |
MS.gene07013.t1 | MTR_6g478020 | 59.429 | 175 | 71 | 0 | 632 | 806 | 1 | 175 | 1.48e-66 | 241 |
MS.gene07013.t1 | MTR_0277s0020 | 49.102 | 167 | 53 | 1 | 640 | 806 | 1159 | 1293 | 4.68e-44 | 172 |
MS.gene07013.t1 | MTR_5g091340 | 24.340 | 530 | 329 | 17 | 279 | 763 | 171 | 673 | 7.05e-34 | 140 |
MS.gene07013.t1 | MTR_4g115620 | 24.151 | 530 | 344 | 16 | 279 | 772 | 168 | 675 | 1.07e-32 | 136 |
MS.gene07013.t1 | MTR_3g047380 | 23.473 | 524 | 338 | 16 | 279 | 763 | 167 | 666 | 6.77e-32 | 134 |
MS.gene07013.t1 | MTR_0419s0050 | 42.767 | 159 | 31 | 2 | 576 | 734 | 1 | 99 | 2.63e-31 | 118 |
MS.gene07013.t1 | MTR_0277s0030 | 55.882 | 68 | 30 | 0 | 576 | 643 | 1 | 68 | 1.01e-16 | 80.5 |
MS.gene07013.t1 | MTR_4g133550 | 67.347 | 49 | 16 | 0 | 78 | 126 | 53 | 101 | 6.34e-16 | 74.7 |
MS.gene07013.t1 | MTR_0419s0010 | 41.667 | 60 | 35 | 0 | 740 | 799 | 12 | 71 | 8.75e-14 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07013.t1 | AT4G02280 | 82.484 | 805 | 138 | 1 | 6 | 807 | 5 | 809 | 0.0 | 1419 |
MS.gene07013.t1 | AT5G49190 | 76.933 | 802 | 182 | 1 | 9 | 807 | 5 | 806 | 0.0 | 1314 |
MS.gene07013.t1 | AT5G49190 | 77.267 | 783 | 175 | 1 | 28 | 807 | 14 | 796 | 0.0 | 1290 |
MS.gene07013.t1 | AT5G49190 | 79.026 | 739 | 155 | 0 | 69 | 807 | 2 | 740 | 0.0 | 1257 |
MS.gene07013.t1 | AT3G43190 | 70.162 | 801 | 237 | 2 | 8 | 807 | 9 | 808 | 0.0 | 1187 |
MS.gene07013.t1 | AT3G43190 | 70.162 | 801 | 237 | 2 | 8 | 807 | 9 | 808 | 0.0 | 1187 |
MS.gene07013.t1 | AT5G20830 | 68.664 | 801 | 249 | 2 | 8 | 807 | 9 | 808 | 0.0 | 1145 |
MS.gene07013.t1 | AT5G20830 | 68.664 | 801 | 249 | 2 | 8 | 807 | 9 | 808 | 0.0 | 1145 |
MS.gene07013.t1 | AT5G20830 | 68.664 | 801 | 249 | 2 | 8 | 807 | 9 | 808 | 0.0 | 1145 |
MS.gene07013.t1 | AT1G73370 | 55.748 | 809 | 354 | 2 | 2 | 806 | 4 | 812 | 0.0 | 950 |
MS.gene07013.t1 | AT1G73370 | 55.748 | 809 | 354 | 2 | 2 | 806 | 4 | 812 | 0.0 | 950 |
MS.gene07013.t1 | AT1G73370 | 57.292 | 768 | 324 | 2 | 43 | 806 | 1 | 768 | 0.0 | 931 |
MS.gene07013.t1 | AT5G37180 | 54.819 | 799 | 354 | 3 | 12 | 806 | 7 | 802 | 0.0 | 927 |
MS.gene07013.t1 | AT5G37180 | 60.749 | 614 | 241 | 0 | 193 | 806 | 1 | 614 | 0.0 | 818 |
MS.gene07013.t1 | AT5G37180 | 62.590 | 556 | 208 | 0 | 251 | 806 | 1 | 556 | 0.0 | 768 |
MS.gene07013.t1 | AT4G10120 | 25.145 | 517 | 314 | 16 | 279 | 754 | 23 | 507 | 5.07e-37 | 150 |
MS.gene07013.t1 | AT4G10120 | 25.145 | 517 | 314 | 16 | 279 | 754 | 197 | 681 | 1.01e-36 | 149 |
MS.gene07013.t1 | AT4G10120 | 25.145 | 517 | 314 | 16 | 279 | 754 | 197 | 681 | 1.01e-36 | 149 |
MS.gene07013.t1 | AT4G10120 | 25.145 | 517 | 314 | 16 | 279 | 754 | 197 | 681 | 1.01e-36 | 149 |
MS.gene07013.t1 | AT4G10120 | 24.798 | 496 | 302 | 14 | 298 | 754 | 17 | 480 | 1.10e-35 | 145 |
MS.gene07013.t1 | AT5G11110 | 25.277 | 542 | 321 | 18 | 279 | 774 | 177 | 680 | 4.86e-35 | 144 |
MS.gene07013.t1 | AT1G04920 | 24.952 | 521 | 334 | 17 | 279 | 763 | 172 | 671 | 4.51e-34 | 141 |
MS.gene07013.t1 | AT5G20280 | 24.490 | 539 | 330 | 18 | 279 | 772 | 170 | 676 | 4.09e-33 | 138 |
MS.gene07013.t1 | AT1G78800 | 26.106 | 226 | 147 | 8 | 539 | 761 | 181 | 389 | 3.14e-11 | 66.6 |
Find 190 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTTATTGGCTTACAAAA+TGG | 0.158718 | 7.2:-5308073 | MS.gene07013:CDS |
TGGCGGGTGTTTATAGTTTC+TGG | 0.169059 | 7.2:-5306253 | MS.gene07013:CDS |
TGAAATCAAGTCCTTGTTTC+TGG | 0.194341 | 7.2:+5308644 | None:intergenic |
CCTGCTTTCTATGAAGCTTT+TGG | 0.208308 | 7.2:-5306607 | MS.gene07013:CDS |
TACTCTTCCTGGACTTTATA+GGG | 0.215735 | 7.2:-5307482 | MS.gene07013:CDS |
TTACTCTTCCTGGACTTTAT+AGG | 0.216268 | 7.2:-5307483 | MS.gene07013:CDS |
ACACTTACAATTAAAATTCT+AGG | 0.229705 | 7.2:+5308619 | None:intergenic |
GAATCTTGTTGCATCTTTAT+TGG | 0.232173 | 7.2:-5308085 | MS.gene07013:CDS |
TTGTCCCCACATGGCTTCTT+TGG | 0.245506 | 7.2:-5309094 | MS.gene07013:CDS |
TTGAACTCTGTCTCTGATAC+TGG | 0.269194 | 7.2:+5311311 | None:intergenic |
GTTTGATGTCTGGCCTTTCC+TGG | 0.276030 | 7.2:-5308360 | MS.gene07013:CDS |
CGAGGAAATGATGCATTAAA+TGG | 0.276236 | 7.2:+5309770 | None:intergenic |
AGTTTCGCGCCTTTCAAGTT+TGG | 0.284457 | 7.2:+5306220 | None:intergenic |
AACTCATTTCTCTCCTTTCC+AGG | 0.299200 | 7.2:-5311263 | MS.gene07013:intron |
CAGCATTATTCATGGCTATT+AGG | 0.299375 | 7.2:+5307830 | None:intergenic |
CATTCTTAAGTTCCGCGATT+TGG | 0.303335 | 7.2:-5306174 | MS.gene07013:intron |
CATGTTGTCCCCTTTGAATC+AGG | 0.306179 | 7.2:+5308482 | None:intergenic |
CTTGCCATGGAGAAGATTAT+AGG | 0.311186 | 7.2:+5306985 | None:intergenic |
TGTTATCCTGATTTCATCAT+AGG | 0.315089 | 7.2:-5308123 | MS.gene07013:CDS |
ATCCAGATTCGGATATATAT+TGG | 0.332113 | 7.2:-5307900 | MS.gene07013:CDS |
TTCCAATATATATCCGAATC+TGG | 0.334790 | 7.2:+5307898 | None:intergenic |
TGCAATTTCTTCTCTGTCAC+TGG | 0.337434 | 7.2:+5306849 | None:intergenic |
TTACCTCTGCATAAGTTTCC+AGG | 0.339603 | 7.2:+5308342 | None:intergenic |
CTGTTTCTTTGAAGGTTACT+AGG | 0.344592 | 7.2:-5308511 | MS.gene07013:intron |
CTCCGTGCTCACACATATAA+AGG | 0.345006 | 7.2:-5309641 | MS.gene07013:CDS |
GTTCCATTCAGATCAGAAAA+AGG | 0.345175 | 7.2:-5308407 | MS.gene07013:CDS |
TTCGTCCAAGACCTGGTGTT+TGG | 0.346976 | 7.2:-5310005 | MS.gene07013:CDS |
AATACCTGTCCGCCAGTATC+AGG | 0.352048 | 7.2:+5309049 | None:intergenic |
TACAAGAGGCGCTTTCGTTC+AGG | 0.354837 | 7.2:-5306710 | MS.gene07013:intron |
CACTGACTCTTTCTAGTCTC+TGG | 0.361530 | 7.2:+5308456 | None:intergenic |
ATCATCGAGAATGGTGTATC+AGG | 0.364771 | 7.2:-5306514 | MS.gene07013:CDS |
AATTCAGAATAGAGTGTATC+AGG | 0.367708 | 7.2:+5309398 | None:intergenic |
TCTATGTGGCAGCGGTTCTC+TGG | 0.368741 | 7.2:-5307022 | MS.gene07013:intron |
TGTCCCCACATGGCTTCTTT+GGG | 0.372067 | 7.2:-5309093 | MS.gene07013:CDS |
CATCTTAAAGATGGCCCCTT+TGG | 0.373343 | 7.2:-5311073 | MS.gene07013:CDS |
TTCCAAACTTCAGTCTGCTT+TGG | 0.376809 | 7.2:-5309453 | MS.gene07013:CDS |
AGAAAAGTCTCTAGTGTAGA+AGG | 0.382065 | 7.2:+5309151 | None:intergenic |
TCTTTATTGGCTTACAAAAT+GGG | 0.383380 | 7.2:-5308072 | MS.gene07013:CDS |
GACCAAAGCAGACTGAAGTT+TGG | 0.390320 | 7.2:+5309451 | None:intergenic |
AAACAAATAGAGCACGTAAC+GGG | 0.395832 | 7.2:-5306756 | MS.gene07013:CDS |
CCATTTAGATTACAAGGAAT+GGG | 0.399557 | 7.2:-5309256 | MS.gene07013:intron |
TCCATTTAGATTACAAGGAA+TGG | 0.401676 | 7.2:-5309257 | MS.gene07013:intron |
CAAACCTTGAGATCCATTTA+CGG | 0.402947 | 7.2:+5308378 | None:intergenic |
TCGTCCAAGACCTGGTGTTT+GGG | 0.407589 | 7.2:-5310004 | MS.gene07013:CDS |
GATAAAATCAGCATTATTCA+TGG | 0.408279 | 7.2:+5307822 | None:intergenic |
CACAAAAGGAGGCAAAACTA+TGG | 0.416512 | 7.2:+5310038 | None:intergenic |
GACTTGATAATTTCACCAAA+GGG | 0.416709 | 7.2:+5311058 | None:intergenic |
AATGGGGTTTGAGAGAGGTT+GGG | 0.429248 | 7.2:-5309239 | MS.gene07013:CDS |
ATAATTTGAATGGCGAGTTT+CGG | 0.431063 | 7.2:-5306792 | MS.gene07013:CDS |
GAACAGCAAATTGAGGGAAC+TGG | 0.434249 | 7.2:-5306914 | MS.gene07013:CDS |
GTCTGCTTTGGTCAAGGCCG+AGG | 0.434854 | 7.2:-5309441 | MS.gene07013:CDS |
GAATGGGGTTTGAGAGAGGT+TGG | 0.439696 | 7.2:-5309240 | MS.gene07013:CDS |
TTCAAAGAAGAACTTGTAGA+TGG | 0.442718 | 7.2:-5309916 | MS.gene07013:CDS |
ATGGGGTTTGAGAGAGGTTG+GGG | 0.442973 | 7.2:-5309238 | MS.gene07013:CDS |
TAGTTTCCTATGATGAAATC+AGG | 0.443022 | 7.2:+5308117 | None:intergenic |
TAATAGCTCTGAAGCTTTGT+CGG | 0.445074 | 7.2:+5306468 | None:intergenic |
CTTTGGGCAAGCCAATGTCC+TGG | 0.445551 | 7.2:-5309077 | MS.gene07013:CDS |
GTCCTGGGATTACCTGATAC+TGG | 0.446313 | 7.2:-5309061 | MS.gene07013:CDS |
GTTTCGCAACAAAGATTGCT+TGG | 0.447511 | 7.2:-5309681 | MS.gene07013:CDS |
GTCTCTAGTGTAGAAGGATC+AGG | 0.449495 | 7.2:+5309157 | None:intergenic |
CTTACGTTCCTGCAATCTCT+TGG | 0.451675 | 7.2:+5307785 | None:intergenic |
AGCTCATCAATCAAATTATG+AGG | 0.452440 | 7.2:+5311121 | None:intergenic |
GGTATGTGGCTCAGGGGAAA+GGG | 0.453071 | 7.2:-5311153 | MS.gene07013:CDS |
GGATCTCAAGGTTTGATGTC+TGG | 0.453858 | 7.2:-5308370 | MS.gene07013:CDS |
TTTGGGCAAGCCAATGTCCT+GGG | 0.455416 | 7.2:-5309076 | MS.gene07013:CDS |
CGAACTGCTATTGCCACAAA+AGG | 0.461639 | 7.2:+5310024 | None:intergenic |
AGGAGAGACAATATTGAACT+TGG | 0.467125 | 7.2:+5307432 | None:intergenic |
TTCTGAAAGGCTTATGACCT+TGG | 0.468081 | 7.2:-5306273 | MS.gene07013:CDS |
GAAGACAAAATATCCAGATT+CGG | 0.470547 | 7.2:-5307911 | MS.gene07013:CDS |
TGCAATCTCTTGGTATGTAC+TGG | 0.473389 | 7.2:+5307795 | None:intergenic |
CCTACATTTGCCACTTGCCA+TGG | 0.473817 | 7.2:-5306550 | MS.gene07013:CDS |
AGGTATGTGGCTCAGGGGAA+AGG | 0.474928 | 7.2:-5311154 | MS.gene07013:CDS |
GAAGCTTTGTCGGGATGATA+AGG | 0.476378 | 7.2:+5306478 | None:intergenic |
AGGTTAATACCTGATTCAAA+GGG | 0.477159 | 7.2:-5308491 | MS.gene07013:CDS |
AAGTTCAATATTGTCTCTCC+TGG | 0.480607 | 7.2:-5307430 | MS.gene07013:CDS |
TAGGTTAATACCTGATTCAA+AGG | 0.486469 | 7.2:-5308492 | MS.gene07013:CDS |
TTTCATCCATTTAGATTACA+AGG | 0.490185 | 7.2:-5309262 | MS.gene07013:intron |
AATAGCTCTGAAGCTTTGTC+GGG | 0.495829 | 7.2:+5306469 | None:intergenic |
ATATTTCCCCTATTCTGAAA+AGG | 0.496157 | 7.2:-5307392 | MS.gene07013:CDS |
ATTGCCAATGGATGATGAAC+GGG | 0.496604 | 7.2:+5309742 | None:intergenic |
GTCAACCTTGTCGTAGTAGC+TGG | 0.497008 | 7.2:-5306892 | MS.gene07013:CDS |
CCATGGCAAGTGGCAAATGT+AGG | 0.497440 | 7.2:+5306550 | None:intergenic |
TATTCCCAAACACCAGGTCT+TGG | 0.497545 | 7.2:+5310000 | None:intergenic |
GATGAGCTTGAAAACATCCT+TGG | 0.497739 | 7.2:-5311106 | MS.gene07013:CDS |
CAAGGAATGGGGTTTGAGAG+AGG | 0.498405 | 7.2:-5309244 | MS.gene07013:CDS |
ATGAAGCAGTATAATTTGAA+TGG | 0.498848 | 7.2:-5306802 | MS.gene07013:CDS |
GAAAGGCTTATGACCTTGGC+GGG | 0.504260 | 7.2:-5306269 | MS.gene07013:CDS |
GCTTGAAAACATCCTTGGTC+AGG | 0.504849 | 7.2:-5311101 | MS.gene07013:CDS |
TCGTAGAGGCCATGACTTGT+GGG | 0.505445 | 7.2:-5306576 | MS.gene07013:CDS |
ACATATTTGACGAGAGGTGG+CGG | 0.505447 | 7.2:+5309702 | None:intergenic |
TGCTAAGAACAGCAAATTGA+GGG | 0.505795 | 7.2:-5306920 | MS.gene07013:CDS |
TTCTCCGTAAATGGATCTCA+AGG | 0.508822 | 7.2:-5308382 | MS.gene07013:CDS |
TTGAGAATGAGATGCTCGCT+CGG | 0.509222 | 7.2:-5308669 | MS.gene07013:CDS |
AACTCTGTCAAGCCTTGCCA+TGG | 0.513366 | 7.2:+5306972 | None:intergenic |
ACTTCAGTCTGCTTTGGTCA+AGG | 0.519022 | 7.2:-5309447 | MS.gene07013:CDS |
AGTACATACCAAGAGATTGC+AGG | 0.522597 | 7.2:-5307793 | MS.gene07013:CDS |
TATATATTGGAAGAAATTTG+AGG | 0.526282 | 7.2:-5307887 | MS.gene07013:CDS |
GAGCGAGCATCTCATTCTCA+AGG | 0.527018 | 7.2:+5308671 | None:intergenic |
GTCGTAGAGGCCATGACTTG+TGG | 0.530169 | 7.2:-5306577 | MS.gene07013:CDS |
CATTGGAACAAAATATCTGA+TGG | 0.530428 | 7.2:-5306409 | MS.gene07013:CDS |
AAGCAGTGTGACTCTCATAC+TGG | 0.532504 | 7.2:+5307506 | None:intergenic |
ATCATAGGAAACTACAGTGA+TGG | 0.532561 | 7.2:-5308108 | MS.gene07013:CDS |
CATGTACTCATCGGTCTGCT+CGG | 0.533554 | 7.2:+5307318 | None:intergenic |
TGTAGGGAGCCCACAAGTCA+TGG | 0.533695 | 7.2:+5306567 | None:intergenic |
AATATGTTTCCAAACTTGAA+AGG | 0.535761 | 7.2:-5306229 | MS.gene07013:CDS |
ATAACAACATTGAACACCAT+TGG | 0.535991 | 7.2:+5309118 | None:intergenic |
GCAGCGGTTCTCTGGCAGAC+CGG | 0.536845 | 7.2:-5307014 | MS.gene07013:intron |
TTTGCGTCATCCGTTGCTAG+TGG | 0.538185 | 7.2:+5305983 | None:intergenic |
CGCCAGTATCAGGTAATCCC+AGG | 0.538967 | 7.2:+5309059 | None:intergenic |
TGAAAGGCTTATGACCTTGG+CGG | 0.539734 | 7.2:-5306270 | MS.gene07013:CDS |
GTGCACAATCGCACATGCAT+TGG | 0.541352 | 7.2:-5307935 | MS.gene07013:CDS |
CCAAAAGCTTCATAGAAAGC+AGG | 0.542321 | 7.2:+5306607 | None:intergenic |
GGACTTTATAGGGTTGTCCA+TGG | 0.542717 | 7.2:-5307472 | MS.gene07013:CDS |
TTGGGGTGATACTGCTGCGC+GGG | 0.543324 | 7.2:-5309221 | MS.gene07013:CDS |
CATGGCAAGTGGCAAATGTA+GGG | 0.543387 | 7.2:+5306551 | None:intergenic |
ATGCTAAGAACAGCAAATTG+AGG | 0.543438 | 7.2:-5306921 | MS.gene07013:CDS |
TATATTGTCAAATCTGCTCC+AGG | 0.544354 | 7.2:+5307412 | None:intergenic |
GATGATGAACGGGTTGGACG+AGG | 0.548582 | 7.2:+5309752 | None:intergenic |
TCATAGGAAACTACAGTGAT+GGG | 0.551749 | 7.2:-5308107 | MS.gene07013:CDS |
AGAGACGATGCATCTGCTGT+TGG | 0.551922 | 7.2:-5309194 | MS.gene07013:CDS |
GGAGAGAAATGAGTTCGTTA+CGG | 0.552427 | 7.2:+5311271 | None:intergenic |
CAGGAGGATCATCTTAAAGA+TGG | 0.559553 | 7.2:-5311082 | MS.gene07013:CDS |
GTAAGGAGGATCCAAACCAT+TGG | 0.560253 | 7.2:-5306426 | MS.gene07013:CDS |
CCAACCCGTTCATCATCCAT+TGG | 0.562354 | 7.2:-5309746 | MS.gene07013:CDS |
TGAAATTATCAAGTCTGCAC+AGG | 0.566300 | 7.2:-5311050 | MS.gene07013:intron |
ACATTTGCCACTTGCCATGG+TGG | 0.569444 | 7.2:-5306547 | MS.gene07013:CDS |
CATTGCCAATGGATGATGAA+CGG | 0.573336 | 7.2:+5309741 | None:intergenic |
ATTACCTGATACTGGCGGAC+AGG | 0.574898 | 7.2:-5309053 | MS.gene07013:intron |
TCTCTAGTGTAGAAGGATCA+GGG | 0.576488 | 7.2:+5309158 | None:intergenic |
ATTTGAATGGCGAGTTTCGG+TGG | 0.579247 | 7.2:-5306789 | MS.gene07013:CDS |
TGAAAACATCCTTGGTCAGG+AGG | 0.579602 | 7.2:-5311098 | MS.gene07013:CDS |
AAGCTTAGAAAGATGATCCT+CGG | 0.579690 | 7.2:+5309424 | None:intergenic |
TTGAAAGGCGCGAAACTCGA+CGG | 0.580968 | 7.2:-5306214 | MS.gene07013:CDS |
AGACTTGATAATTTCACCAA+AGG | 0.581692 | 7.2:+5311057 | None:intergenic |
ATCAGGTAATCCCAGGACAT+TGG | 0.581879 | 7.2:+5309066 | None:intergenic |
GAAACATATTTGACGAGAGG+TGG | 0.582358 | 7.2:+5309699 | None:intergenic |
GGCCTTTATATGTGTGAGCA+CGG | 0.583408 | 7.2:+5309639 | None:intergenic |
TGGACAACCCTATAAAGTCC+AGG | 0.585007 | 7.2:+5307475 | None:intergenic |
CGTTCATCATCCATTGGCAA+TGG | 0.585738 | 7.2:-5309740 | MS.gene07013:CDS |
TGAACTCTGTCTCTGATACT+GGG | 0.588364 | 7.2:+5311312 | None:intergenic |
CCATTCTCGATGATCTCAGC+AGG | 0.589073 | 7.2:+5306523 | None:intergenic |
TTACAAAATGGGAGTTACCC+AGG | 0.589080 | 7.2:-5308061 | MS.gene07013:intron |
CATGGAAGATCTATTCTGAA+AGG | 0.590172 | 7.2:-5306286 | MS.gene07013:CDS |
AGAAGATTATAGGCTTTGAC+CGG | 0.590577 | 7.2:+5306995 | None:intergenic |
CTTGCCCAAAGAAGCCATGT+GGG | 0.591673 | 7.2:+5309089 | None:intergenic |
CCTGCTGAGATCATCGAGAA+TGG | 0.592122 | 7.2:-5306523 | MS.gene07013:CDS |
CTCGCTCGGATCCAGAAACA+AGG | 0.594275 | 7.2:-5308655 | MS.gene07013:CDS |
AGCACGGAGGAAATCAAGCA+AGG | 0.595137 | 7.2:+5309655 | None:intergenic |
TCTGCATAAGTTTCCAGGAA+AGG | 0.597513 | 7.2:+5308347 | None:intergenic |
CATTTAGATTACAAGGAATG+GGG | 0.599387 | 7.2:-5309255 | MS.gene07013:intron |
GTTGTTATATTGTCCCCACA+TGG | 0.603123 | 7.2:-5309103 | MS.gene07013:CDS |
AAATTCTGTTCCACTAGCAA+CGG | 0.604202 | 7.2:-5305993 | MS.gene07013:CDS |
TGCGAAACATATTTGACGAG+AGG | 0.605359 | 7.2:+5309696 | None:intergenic |
CTATAATCTTCTCCATGGCA+AGG | 0.605694 | 7.2:-5306984 | MS.gene07013:CDS |
AAAAGACTCACAGCTCTGCA+TGG | 0.606202 | 7.2:-5307367 | MS.gene07013:CDS |
ATAGCAGTTCGTCCAAGACC+TGG | 0.609018 | 7.2:-5310012 | MS.gene07013:CDS |
TCTTCCAGGAAGAATACTGT+TGG | 0.609357 | 7.2:-5307529 | MS.gene07013:intron |
AAATTGCACACCATTGCCAA+TGG | 0.609553 | 7.2:+5309730 | None:intergenic |
ACTGCTATTGCCACAAAAGG+AGG | 0.611858 | 7.2:+5310027 | None:intergenic |
AACAAATAGAGCACGTAACG+GGG | 0.612694 | 7.2:-5306755 | MS.gene07013:CDS |
AGCAGGACCACCATGGCAAG+TGG | 0.613714 | 7.2:+5306540 | None:intergenic |
GGAGAGACAATATTGAACTT+GGG | 0.613753 | 7.2:+5307433 | None:intergenic |
GAAACTATAAACACCCGCCA+AGG | 0.615765 | 7.2:+5306256 | None:intergenic |
AATAATTAAACAGGTACACA+TGG | 0.618388 | 7.2:-5306304 | MS.gene07013:intron |
CGGACATATTCCCAAACACC+AGG | 0.620557 | 7.2:+5309994 | None:intergenic |
ATCAGGATAACATTGTAACT+CGG | 0.629601 | 7.2:+5308134 | None:intergenic |
AAAGCCTATAATCTTCTCCA+TGG | 0.629889 | 7.2:-5306989 | MS.gene07013:CDS |
ATAAACTCACATGTACTCAT+CGG | 0.631800 | 7.2:+5307309 | None:intergenic |
CAGAGACTAGAAAGAGTCAG+TGG | 0.638324 | 7.2:-5308455 | MS.gene07013:CDS |
TTTCCTGGAAACTTATGCAG+AGG | 0.638940 | 7.2:-5308345 | MS.gene07013:intron |
TAAGATGATCCTCCTGACCA+AGG | 0.639852 | 7.2:+5311089 | None:intergenic |
AGCGAGCATCTCATTCTCAA+GGG | 0.640235 | 7.2:+5308672 | None:intergenic |
CTCTAGTGTAGAAGGATCAG+GGG | 0.642264 | 7.2:+5309159 | None:intergenic |
GCACGGAGGAAATCAAGCAA+GGG | 0.649084 | 7.2:+5309656 | None:intergenic |
CAAACAAATAGAGCACGTAA+CGG | 0.652171 | 7.2:-5306757 | MS.gene07013:CDS |
TGGAACAAAATATCTGATGG+AGG | 0.653416 | 7.2:-5306406 | MS.gene07013:CDS |
CGTTACATAGCAGATACAAG+AGG | 0.656248 | 7.2:-5306724 | MS.gene07013:CDS |
TTGCCCAAAGAAGCCATGTG+GGG | 0.662384 | 7.2:+5309090 | None:intergenic |
TTTGAAGGTATGTGGCTCAG+GGG | 0.666698 | 7.2:-5311159 | MS.gene07013:intron |
CCAATGGATGATGAACGGGT+TGG | 0.668112 | 7.2:+5309746 | None:intergenic |
GCTTGCCCAAAGAAGCCATG+TGG | 0.683907 | 7.2:+5309088 | None:intergenic |
ACTTGATAATTTCACCAAAG+GGG | 0.685337 | 7.2:+5311059 | None:intergenic |
TGATCTCAGCAGGACCACCA+TGG | 0.686062 | 7.2:+5306533 | None:intergenic |
CTGGGATTACCTGATACTGG+CGG | 0.694549 | 7.2:-5309058 | MS.gene07013:CDS |
GTTGGGGTGATACTGCTGCG+CGG | 0.696387 | 7.2:-5309222 | MS.gene07013:CDS |
GGTTAATACCTGATTCAAAG+GGG | 0.712599 | 7.2:-5308490 | MS.gene07013:CDS |
TATAACCAGCTACTACGACA+AGG | 0.732009 | 7.2:+5306887 | None:intergenic |
CTTTATATGTGTGAGCACGG+AGG | 0.732559 | 7.2:+5309642 | None:intergenic |
CAACACGACTTACCAAATCG+CGG | 0.735507 | 7.2:+5306162 | None:intergenic |
TGAGTTCAAAGACATTAACA+CGG | 0.744132 | 7.2:+5309974 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTTTGATTATTTATTTTTT+TGG | - | chr7.2:5306910-5306929 | MS.gene07013:CDS | 10.0% |
!!! | CTTTGATTATTTATTTTTTT+GGG | - | chr7.2:5306911-5306930 | MS.gene07013:CDS | 10.0% |
!!! | TTTCTAATTTTTATTGTAAA+TGG | + | chr7.2:5306620-5306639 | None:intergenic | 10.0% |
!!! | TTTGTTATTTTTTATTTTGA+AGG | - | chr7.2:5306147-5306166 | MS.gene07013:intron | 10.0% |
!! | TTAAATCTTTCAATATGATA+CGG | + | chr7.2:5307220-5307239 | None:intergenic | 15.0% |
!!! | AAGTTGTTGAATATTTATTT+TGG | - | chr7.2:5309696-5309715 | MS.gene07013:CDS | 15.0% |
!!! | ACAAGTTTTTTTTTTATCAT+AGG | - | chr7.2:5308599-5308618 | MS.gene07013:intron | 15.0% |
!!! | TAATTTTTTTTCATGATGTA+TGG | - | chr7.2:5309559-5309578 | MS.gene07013:intron | 15.0% |
!! | AAAAAAAAACTTGTGTAGAA+TGG | + | chr7.2:5308593-5308612 | None:intergenic | 20.0% |
!! | AACTTGAAAAAACAAAAAAG+TGG | + | chr7.2:5306309-5306328 | None:intergenic | 20.0% |
!! | ACACTTACAATTAAAATTCT+AGG | + | chr7.2:5308705-5308724 | None:intergenic | 20.0% |
!! | ATACTGTATTTGTATCTATT+TGG | - | chr7.2:5307013-5307032 | MS.gene07013:CDS | 20.0% |
!! | ATCATTTCCCATAAATTAAA+AGG | - | chr7.2:5307113-5307132 | MS.gene07013:intron | 20.0% |
!! | ATTGTTTAAACAAACAAAAG+TGG | + | chr7.2:5306429-5306448 | None:intergenic | 20.0% |
!! | CAGTATATAAATAACACTAT+TGG | + | chr7.2:5306999-5307018 | None:intergenic | 20.0% |
!! | CCTATTAAATTTATAAGATC+AGG | - | chr7.2:5311251-5311270 | MS.gene07013:intron | 20.0% |
!! | CCTGATCTTATAAATTTAAT+AGG | + | chr7.2:5311254-5311273 | None:intergenic | 20.0% |
!! | CTACATATATGAAATTACAA+CGG | + | chr7.2:5307777-5307796 | None:intergenic | 20.0% |
!! | GAAATAAGGTGATAAAAAAA+GGG | + | chr7.2:5309293-5309312 | None:intergenic | 20.0% |
!! | GTAATTACAAAAGAGAAAAA+TGG | + | chr7.2:5306470-5306489 | None:intergenic | 20.0% |
!! | TATATATTGGAAGAAATTTG+AGG | - | chr7.2:5309434-5309453 | MS.gene07013:CDS | 20.0% |
!! | TATTTGTAACCAATGATATT+AGG | + | chr7.2:5309138-5309157 | None:intergenic | 20.0% |
!! | TCAAAGTAAAAAAATATCAG+TGG | + | chr7.2:5306897-5306916 | None:intergenic | 20.0% |
!! | TCAAATTTAGTATGGAAATA+AGG | + | chr7.2:5309307-5309326 | None:intergenic | 20.0% |
!! | TCATTTCCCATAAATTAAAA+GGG | - | chr7.2:5307114-5307133 | MS.gene07013:intron | 20.0% |
!! | TTGTTTAAACAAACAAAAGT+GGG | + | chr7.2:5306428-5306447 | None:intergenic | 20.0% |
!!! | AAATGATGTGAGTATTTTAT+AGG | - | chr7.2:5308005-5308024 | MS.gene07013:intron | 20.0% |
!!! | ACATGTATGCATTTTTTTAT+AGG | - | chr7.2:5308370-5308389 | MS.gene07013:CDS | 20.0% |
!!! | GACATGTTTATTTTTTACAA+TGG | - | chr7.2:5310202-5310221 | MS.gene07013:intron | 20.0% |
!!! | GATTAATGATAATTTTGTAC+TGG | - | chr7.2:5307514-5307533 | MS.gene07013:CDS | 20.0% |
!!! | GTTGCAGAATTTTTTAATTT+AGG | - | chr7.2:5310039-5310058 | MS.gene07013:CDS | 20.0% |
!!! | TCACATTTTTTTTCTTTTTG+AGG | + | chr7.2:5306562-5306581 | None:intergenic | 20.0% |
!!! | TGAATTTTTCCAAAAAAGTA+AGG | - | chr7.2:5310878-5310897 | MS.gene07013:intron | 20.0% |
!!! | TTTTTATAGGCAAATATTAG+TGG | - | chr7.2:5308383-5308402 | MS.gene07013:CDS | 20.0% |
!!! | TTTTTTATTTTGAAGGTATG+TGG | - | chr7.2:5306154-5306173 | MS.gene07013:intron | 20.0% |
! | AAAATCTCAAATTTGAGTCA+TGG | + | chr7.2:5306828-5306847 | None:intergenic | 25.0% |
! | AAAATGGTAGCAAATGATTT+AGG | + | chr7.2:5306454-5306473 | None:intergenic | 25.0% |
! | AAATAAACATGTCAAGATCT+CGG | + | chr7.2:5310195-5310214 | None:intergenic | 25.0% |
! | AATAATTAAACAGGTACACA+TGG | - | chr7.2:5311017-5311036 | MS.gene07013:intron | 25.0% |
! | AATATGTTTCCAAACTTGAA+AGG | - | chr7.2:5311092-5311111 | MS.gene07013:CDS | 25.0% |
! | AATATTCATCAATGATGTTG+TGG | - | chr7.2:5307141-5307160 | MS.gene07013:intron | 25.0% |
! | AATTTATCTTTGTCTCTATG+TGG | - | chr7.2:5310285-5310304 | MS.gene07013:intron | 25.0% |
! | ACAAGCTTTCAAATTTAGTA+TGG | + | chr7.2:5309315-5309334 | None:intergenic | 25.0% |
! | ACAGGATTATTAAGAATGAA+TGG | - | chr7.2:5309040-5309059 | MS.gene07013:intron | 25.0% |
! | AGTTAAAAACATAACTGGTT+TGG | - | chr7.2:5310368-5310387 | MS.gene07013:intron | 25.0% |
! | ATAATATGGGAGAGAAATTA+AGG | + | chr7.2:5307806-5307825 | None:intergenic | 25.0% |
! | ATGAAGCAGTATAATTTGAA+TGG | - | chr7.2:5310519-5310538 | MS.gene07013:intron | 25.0% |
! | ATGGTTTCATAACTTAGTTT+AGG | - | chr7.2:5309059-5309078 | MS.gene07013:CDS | 25.0% |
! | ATTAACAGTAATTGCAAGTA+TGG | - | chr7.2:5307062-5307081 | MS.gene07013:intron | 25.0% |
! | GATAAAATCAGCATTATTCA+TGG | + | chr7.2:5309502-5309521 | None:intergenic | 25.0% |
! | GGAAATAAGGTGATAAAAAA+AGG | + | chr7.2:5309294-5309313 | None:intergenic | 25.0% |
! | TAAGACTATATGTTCTATGA+TGG | - | chr7.2:5307956-5307975 | MS.gene07013:intron | 25.0% |
! | TAATATGGGAGAGAAATTAA+GGG | + | chr7.2:5307805-5307824 | None:intergenic | 25.0% |
! | TAATTGTAAGTGTAACTTCT+TGG | - | chr7.2:5308712-5308731 | MS.gene07013:intron | 25.0% |
! | TAGTAAAACATAGAAAGTGA+AGG | + | chr7.2:5306106-5306125 | None:intergenic | 25.0% |
! | TCGCTAATAAAGAAGTTATT+TGG | - | chr7.2:5306508-5306527 | MS.gene07013:CDS | 25.0% |
! | TCTAATGAAATGATTATGCT+AGG | - | chr7.2:5307745-5307764 | MS.gene07013:intron | 25.0% |
! | TGCTAAGCAAATAATTAAAC+AGG | - | chr7.2:5311008-5311027 | MS.gene07013:intron | 25.0% |
! | TTAATCCTATTGCACAATAT+AGG | + | chr7.2:5307500-5307519 | None:intergenic | 25.0% |
! | TTATTAGCGAAATTATGTGA+AGG | + | chr7.2:5306498-5306517 | None:intergenic | 25.0% |
! | TTCAATTATTAATCTGACAC+AGG | - | chr7.2:5309022-5309041 | MS.gene07013:intron | 25.0% |
! | TTTCATCCATTTAGATTACA+AGG | - | chr7.2:5308059-5308078 | MS.gene07013:intron | 25.0% |
!! | ATTTTTCCAAAAAAGTAAGG+AGG | - | chr7.2:5310881-5310900 | MS.gene07013:intron | 25.0% |
!! | GTCTTCAAAGAATTTTTGAA+AGG | - | chr7.2:5310937-5310956 | MS.gene07013:intron | 25.0% |
!! | TTTCTATGTTTTACTATGCA+TGG | - | chr7.2:5306110-5306129 | MS.gene07013:intron | 25.0% |
!! | TTTTGTGTGTCAAATTTTTC+AGG | - | chr7.2:5311304-5311323 | MS.gene07013:CDS | 25.0% |
!!! | ATATTAGTGGTTAGTTTGTT+AGG | - | chr7.2:5308396-5308415 | MS.gene07013:CDS | 25.0% |
!!! | ATCTTTATTGGCTTACAAAA+TGG | - | chr7.2:5309248-5309267 | MS.gene07013:CDS | 25.0% |
!!! | ATTCTGTCCCTTTTAATTTA+TGG | + | chr7.2:5307124-5307143 | None:intergenic | 25.0% |
!!! | TATTAGTGGTTAGTTTGTTA+GGG | - | chr7.2:5308397-5308416 | MS.gene07013:CDS | 25.0% |
!!! | TCAAAGAATTTTTGAAAGGT+AGG | - | chr7.2:5310941-5310960 | MS.gene07013:intron | 25.0% |
!!! | TCTTTATTGGCTTACAAAAT+GGG | - | chr7.2:5309249-5309268 | MS.gene07013:CDS | 25.0% |
!!! | TTCTGTCCCTTTTAATTTAT+GGG | + | chr7.2:5307123-5307142 | None:intergenic | 25.0% |
AAAAAAAGGGACAAAAACCT+GGG | + | chr7.2:5309280-5309299 | None:intergenic | 30.0% | |
AAAAAGGAATTCTCCGTAAA+TGG | - | chr7.2:5308930-5308949 | MS.gene07013:intron | 30.0% | |
AAAAATTATGCCTTCCCATA+TGG | - | chr7.2:5306855-5306874 | MS.gene07013:CDS | 30.0% | |
AAAATCATGTCACATTTGTC+AGG | - | chr7.2:5310238-5310257 | MS.gene07013:intron | 30.0% | |
AAACAATGCATACATGTTCA+GGG | + | chr7.2:5308486-5308505 | None:intergenic | 30.0% | |
AAATAGATGGAATCAACCAA+GGG | + | chr7.2:5308536-5308555 | None:intergenic | 30.0% | |
AACAAAGCAAGACAAATAGA+TGG | + | chr7.2:5308549-5308568 | None:intergenic | 30.0% | |
AATGAATAATGATGCTTGAG+TGG | + | chr7.2:5310669-5310688 | None:intergenic | 30.0% | |
AATTCAGAATAGAGTGTATC+AGG | + | chr7.2:5307926-5307945 | None:intergenic | 30.0% | |
AGAAGATCAATTACTTACAG+AGG | + | chr7.2:5310090-5310109 | None:intergenic | 30.0% | |
AGCTCATCAATCAAATTATG+AGG | + | chr7.2:5306203-5306222 | None:intergenic | 30.0% | |
AGGTTAATACCTGATTCAAA+GGG | - | chr7.2:5308830-5308849 | MS.gene07013:intron | 30.0% | |
ATAAACTCACATGTACTCAT+CGG | + | chr7.2:5310015-5310034 | None:intergenic | 30.0% | |
ATAACAACATTGAACACCAT+TGG | + | chr7.2:5308206-5308225 | None:intergenic | 30.0% | |
ATAATTTGAATGGCGAGTTT+CGG | - | chr7.2:5310529-5310548 | MS.gene07013:intron | 30.0% | |
ATCAGGATAACATTGTAACT+CGG | + | chr7.2:5309190-5309209 | None:intergenic | 30.0% | |
ATCCAGATTCGGATATATAT+TGG | - | chr7.2:5309421-5309440 | MS.gene07013:CDS | 30.0% | |
ATGTTGACAAGCCAAATAAA+AGG | + | chr7.2:5309641-5309660 | None:intergenic | 30.0% | |
ATTGCACAATATAGGACAAA+CGG | + | chr7.2:5307492-5307511 | None:intergenic | 30.0% | |
CATTGGAACAAAATATCTGA+TGG | - | chr7.2:5310912-5310931 | MS.gene07013:intron | 30.0% | |
CATTTAGATTACAAGGAATG+GGG | - | chr7.2:5308066-5308085 | MS.gene07013:CDS | 30.0% | |
CCATTTAGATTACAAGGAAT+GGG | - | chr7.2:5308065-5308084 | MS.gene07013:CDS | 30.0% | |
CGCCTGTAACATTATAATAT+GGG | + | chr7.2:5307819-5307838 | None:intergenic | 30.0% | |
CTCCCATATTATAATGTTAC+AGG | - | chr7.2:5307814-5307833 | MS.gene07013:CDS | 30.0% | |
GAAGACAAAATATCCAGATT+CGG | - | chr7.2:5309410-5309429 | MS.gene07013:CDS | 30.0% | |
GAATCTTGTTGCATCTTTAT+TGG | - | chr7.2:5309236-5309255 | MS.gene07013:CDS | 30.0% | |
GACAGAGTTAAAAACATAAC+TGG | - | chr7.2:5310363-5310382 | MS.gene07013:intron | 30.0% | |
GATGAGTAACAAGTTTAAAG+TGG | + | chr7.2:5310141-5310160 | None:intergenic | 30.0% | |
GTCAATTAAACAGTAAAGAG+TGG | + | chr7.2:5310647-5310666 | None:intergenic | 30.0% | |
TAAAAAAAGGGACAAAAACC+TGG | + | chr7.2:5309281-5309300 | None:intergenic | 30.0% | |
TAAACAATGCATACATGTTC+AGG | + | chr7.2:5308487-5308506 | None:intergenic | 30.0% | |
TAGGTTAATACCTGATTCAA+AGG | - | chr7.2:5308829-5308848 | MS.gene07013:intron | 30.0% | |
TAGTTTCCTATGATGAAATC+AGG | + | chr7.2:5309207-5309226 | None:intergenic | 30.0% | |
TCAAATTTGAGTCATGGTTT+AGG | + | chr7.2:5306822-5306841 | None:intergenic | 30.0% | |
TCCATTTAGATTACAAGGAA+TGG | - | chr7.2:5308064-5308083 | MS.gene07013:CDS | 30.0% | |
TCTGCTATTACTCAAACAAA+GGG | - | chr7.2:5306956-5306975 | MS.gene07013:CDS | 30.0% | |
TGAGTTCAAAGACATTAACA+CGG | + | chr7.2:5307350-5307369 | None:intergenic | 30.0% | |
TGTGATGTTAAATAAGGTGT+TGG | + | chr7.2:5310172-5310191 | None:intergenic | 30.0% | |
TGTTATCCTGATTTCATCAT+AGG | - | chr7.2:5309198-5309217 | MS.gene07013:CDS | 30.0% | |
TGTTGACAAGCCAAATAAAA+GGG | + | chr7.2:5309640-5309659 | None:intergenic | 30.0% | |
TTCAAAGAAGAACTTGTAGA+TGG | - | chr7.2:5307405-5307424 | MS.gene07013:CDS | 30.0% | |
TTCCAATATATATCCGAATC+TGG | + | chr7.2:5309426-5309445 | None:intergenic | 30.0% | |
TTCTCGTAATAAAAGCTAAG+CGG | + | chr7.2:5307446-5307465 | None:intergenic | 30.0% | |
TTCTGCTATTACTCAAACAA+AGG | - | chr7.2:5306955-5306974 | MS.gene07013:CDS | 30.0% | |
TTGTAACCAATGATATTAGG+TGG | + | chr7.2:5309135-5309154 | None:intergenic | 30.0% | |
TTTCAATATGATACGGTGAT+TGG | + | chr7.2:5307213-5307232 | None:intergenic | 30.0% | |
TTTGTCCTATATTGTGCAAT+AGG | - | chr7.2:5307492-5307511 | MS.gene07013:CDS | 30.0% | |
! | ACTTGATAATTTCACCAAAG+GGG | + | chr7.2:5306265-5306284 | None:intergenic | 30.0% |
! | AGACTTGATAATTTCACCAA+AGG | + | chr7.2:5306267-5306286 | None:intergenic | 30.0% |
! | ATATTTCCCCTATTCTGAAA+AGG | - | chr7.2:5309929-5309948 | MS.gene07013:CDS | 30.0% |
! | ATTCCTTTTTCTGATCTGAA+TGG | + | chr7.2:5308920-5308939 | None:intergenic | 30.0% |
! | CAGGTTCTTCTTATTTGATA+AGG | - | chr7.2:5308738-5308757 | MS.gene07013:intron | 30.0% |
! | CATCAGATATTTTGTTCCAA+TGG | + | chr7.2:5310914-5310933 | None:intergenic | 30.0% |
! | CTTTTCTCCTTTTCAGAATA+GGG | + | chr7.2:5309939-5309958 | None:intergenic | 30.0% |
! | GACTTGATAATTTCACCAAA+GGG | + | chr7.2:5306266-5306285 | None:intergenic | 30.0% |
! | GATATTTTGTTCCAATGGTT+TGG | + | chr7.2:5310909-5310928 | None:intergenic | 30.0% |
! | TCTTTTCTCCTTTTCAGAAT+AGG | + | chr7.2:5309940-5309959 | None:intergenic | 30.0% |
! | TGATAAGGCTTTAACGTAAT+TGG | - | chr7.2:5308753-5308772 | MS.gene07013:intron | 30.0% |
! | TTTGAAAGGTAGGTGATTTT+TGG | - | chr7.2:5310951-5310970 | MS.gene07013:intron | 30.0% |
! | TTTTCTCCTTTTCAGAATAG+GGG | + | chr7.2:5309938-5309957 | None:intergenic | 30.0% |
!! | AGGGGAATTTGTTAACATAA+GGG | - | chr7.2:5308422-5308441 | MS.gene07013:CDS | 30.0% |
!! | ATTAGTGGTTAGTTTGTTAG+GGG | - | chr7.2:5308398-5308417 | MS.gene07013:CDS | 30.0% |
!!! | CTTAGCATTTTTTTGTCAAC+AGG | + | chr7.2:5310995-5311014 | None:intergenic | 30.0% |
!!! | TGTAGCATTATTTTTGTGAC+AGG | - | chr7.2:5307257-5307276 | MS.gene07013:intron | 30.0% |
AAACAAATAGAGCACGTAAC+GGG | - | chr7.2:5310565-5310584 | MS.gene07013:intron | 35.0% | |
AAAGCCTATAATCTTCTCCA+TGG | - | chr7.2:5310332-5310351 | MS.gene07013:intron | 35.0% | |
AAATTCTGTTCCACTAGCAA+CGG | - | chr7.2:5311328-5311347 | MS.gene07013:CDS | 35.0% | |
AAGCTTAGAAAGATGATCCT+CGG | + | chr7.2:5307900-5307919 | None:intergenic | 35.0% | |
AAGTTCAATATTGTCTCTCC+TGG | - | chr7.2:5309891-5309910 | MS.gene07013:intron | 35.0% | |
AATTTGAGTCATGGTTTAGG+AGG | + | chr7.2:5306819-5306838 | None:intergenic | 35.0% | |
ACAAGAACAGCTGAACTTAA+TGG | - | chr7.2:5308347-5308366 | MS.gene07013:CDS | 35.0% | |
AGAAAAGTCTCTAGTGTAGA+AGG | + | chr7.2:5308173-5308192 | None:intergenic | 35.0% | |
AGATCATAGCATACCAACAA+GGG | + | chr7.2:5311200-5311219 | None:intergenic | 35.0% | |
AGCTAACATAGTAAAAGGTC+GGG | - | chr7.2:5306679-5306698 | MS.gene07013:intron | 35.0% | |
AGGAGAGACAATATTGAACT+TGG | + | chr7.2:5309892-5309911 | None:intergenic | 35.0% | |
ATCATAGGAAACTACAGTGA+TGG | - | chr7.2:5309213-5309232 | MS.gene07013:CDS | 35.0% | |
ATGATATTAGGTGGAAAAGC+TGG | + | chr7.2:5309126-5309145 | None:intergenic | 35.0% | |
ATGCTAAGAACAGCAAATTG+AGG | - | chr7.2:5310400-5310419 | MS.gene07013:intron | 35.0% | |
ATTTGAGTCATGGTTTAGGA+GGG | + | chr7.2:5306818-5306837 | None:intergenic | 35.0% | |
CAAACAAATAGAGCACGTAA+CGG | - | chr7.2:5310564-5310583 | MS.gene07013:intron | 35.0% | |
CAAACCTTGAGATCCATTTA+CGG | + | chr7.2:5308946-5308965 | None:intergenic | 35.0% | |
CAAATAGATGGAATCAACCA+AGG | + | chr7.2:5308537-5308556 | None:intergenic | 35.0% | |
CAGCATTATTCATGGCTATT+AGG | + | chr7.2:5309494-5309513 | None:intergenic | 35.0% | |
CAGCTAACATAGTAAAAGGT+CGG | - | chr7.2:5306678-5306697 | MS.gene07013:intron | 35.0% | |
CAGTGAACTGACATGAAAAA+TGG | + | chr7.2:5309467-5309486 | None:intergenic | 35.0% | |
CATAACACAGAAAACCTACA+TGG | + | chr7.2:5307706-5307725 | None:intergenic | 35.0% | |
CATGGAAGATCTATTCTGAA+AGG | - | chr7.2:5311035-5311054 | MS.gene07013:intron | 35.0% | |
CCCATTCCTTGTAATCTAAA+TGG | + | chr7.2:5308068-5308087 | None:intergenic | 35.0% | |
CGAGGAAATGATGCATTAAA+TGG | + | chr7.2:5307554-5307573 | None:intergenic | 35.0% | |
CTGCTATTACTCAAACAAAG+GGG | - | chr7.2:5306957-5306976 | MS.gene07013:CDS | 35.0% | |
CTTAACTTATGTTGTCTTCC+AGG | - | chr7.2:5309778-5309797 | MS.gene07013:CDS | 35.0% | |
GATCAAAAACATCAATGCCA+TGG | + | chr7.2:5309869-5309888 | None:intergenic | 35.0% | |
GATGATGAAGAAAAAGAACC+TGG | + | chr7.2:5306079-5306098 | None:intergenic | 35.0% | |
GCGCCTGTAACATTATAATA+TGG | + | chr7.2:5307820-5307839 | None:intergenic | 35.0% | |
GGAGAGACAATATTGAACTT+GGG | + | chr7.2:5309891-5309910 | None:intergenic | 35.0% | |
GGTTAATACCTGATTCAAAG+GGG | - | chr7.2:5308831-5308850 | MS.gene07013:intron | 35.0% | |
GTGTGAAAAATCAGTATCAG+AGG | - | chr7.2:5307084-5307103 | MS.gene07013:intron | 35.0% | |
GTTCCATTCAGATCAGAAAA+AGG | - | chr7.2:5308914-5308933 | MS.gene07013:intron | 35.0% | |
GTTGCAGCTAACATAGTAAA+AGG | - | chr7.2:5306674-5306693 | MS.gene07013:intron | 35.0% | |
TAAATGGATGAAAGAGTCAG+AGG | + | chr7.2:5308052-5308071 | None:intergenic | 35.0% | |
TACTCTTCCTGGACTTTATA+GGG | - | chr7.2:5309839-5309858 | MS.gene07013:intron | 35.0% | |
TAGATCATAGCATACCAACA+AGG | + | chr7.2:5311201-5311220 | None:intergenic | 35.0% | |
TATATTGTCAAATCTGCTCC+AGG | + | chr7.2:5309912-5309931 | None:intergenic | 35.0% | |
TATTAGCTGCACATACAAGA+CGG | + | chr7.2:5306648-5306667 | None:intergenic | 35.0% | |
TCATAGGAAACTACAGTGAT+GGG | - | chr7.2:5309214-5309233 | MS.gene07013:CDS | 35.0% | |
TGAAATTATCAAGTCTGCAC+AGG | - | chr7.2:5306271-5306290 | MS.gene07013:CDS | 35.0% | |
TGAAGAAAAAGAACCTGGAA+AGG | + | chr7.2:5306074-5306093 | None:intergenic | 35.0% | |
TGCTAAGAACAGCAAATTGA+GGG | - | chr7.2:5310401-5310420 | MS.gene07013:intron | 35.0% | |
TGGAACAAAATATCTGATGG+AGG | - | chr7.2:5310915-5310934 | MS.gene07013:intron | 35.0% | |
TTACTCTTCCTGGACTTTAT+AGG | - | chr7.2:5309838-5309857 | MS.gene07013:intron | 35.0% | |
TTGAAGCTGTACATGTTGAT+AGG | + | chr7.2:5309007-5309026 | None:intergenic | 35.0% | |
! | ACAGAGGTATGAACTGTTAT+AGG | + | chr7.2:5310074-5310093 | None:intergenic | 35.0% |
! | AGAAGATTATAGGCTTTGAC+CGG | + | chr7.2:5310329-5310348 | None:intergenic | 35.0% |
! | CATTGGTTACAAATATCGAC+AGG | - | chr7.2:5309143-5309162 | MS.gene07013:CDS | 35.0% |
! | CTACACTAGAGACTTTTCTT+GGG | - | chr7.2:5308174-5308193 | MS.gene07013:intron | 35.0% |
! | CTATGAAGCTTTTGGACTTA+CGG | - | chr7.2:5310722-5310741 | MS.gene07013:intron | 35.0% |
! | CTGTTTCTTTGAAGGTTACT+AGG | - | chr7.2:5308810-5308829 | MS.gene07013:intron | 35.0% |
! | GAACTTGTCTGTTTCTTTGA+AGG | - | chr7.2:5308802-5308821 | MS.gene07013:intron | 35.0% |
! | GCTTTTCCACCTAATATCAT+TGG | - | chr7.2:5309126-5309145 | MS.gene07013:CDS | 35.0% |
! | TCTACACTAGAGACTTTTCT+TGG | - | chr7.2:5308173-5308192 | MS.gene07013:intron | 35.0% |
! | TCTCGGTGTGATGTTAAATA+AGG | + | chr7.2:5310178-5310197 | None:intergenic | 35.0% |
! | TGAAATCAAGTCCTTGTTTC+TGG | + | chr7.2:5308680-5308699 | None:intergenic | 35.0% |
!! | AAATAAGGTGTTGGTACTGA+AGG | + | chr7.2:5310163-5310182 | None:intergenic | 35.0% |
!! | GAGGGGAATTTGTTAACATA+AGG | - | chr7.2:5308421-5308440 | MS.gene07013:CDS | 35.0% |
!! | TAATAGCTCTGAAGCTTTGT+CGG | + | chr7.2:5310856-5310875 | None:intergenic | 35.0% |
!! | TTAGTGGTTAGTTTGTTAGG+GGG | - | chr7.2:5308399-5308418 | MS.gene07013:CDS | 35.0% |
!!! | TTGGATCCTCCTTACTTTTT+TGG | + | chr7.2:5310890-5310909 | None:intergenic | 35.0% |
AAATTGCACACCATTGCCAA+TGG | + | chr7.2:5307594-5307613 | None:intergenic | 40.0% | |
AACAAATAGAGCACGTAACG+GGG | - | chr7.2:5310566-5310585 | MS.gene07013:intron | 40.0% | |
AACTCATTTCTCTCCTTTCC+AGG | - | chr7.2:5306058-5306077 | MS.gene07013:intron | 40.0% | |
AAGTGTAACTTCTTGGAGTC+AGG | - | chr7.2:5308719-5308738 | MS.gene07013:intron | 40.0% | |
AATGCATACATGTTCAGGGT+TGG | + | chr7.2:5308482-5308501 | None:intergenic | 40.0% | |
AGTACATACCAAGAGATTGC+AGG | - | chr7.2:5309528-5309547 | MS.gene07013:intron | 40.0% | |
ATAGCATACCAACAAGGGAA+CGG | + | chr7.2:5311195-5311214 | None:intergenic | 40.0% | |
ATAGGCACAGAGCATATAGA+TGG | + | chr7.2:5311236-5311255 | None:intergenic | 40.0% | |
ATCATCGAGAATGGTGTATC+AGG | - | chr7.2:5310807-5310826 | MS.gene07013:intron | 40.0% | |
ATGCATACATGTTCAGGGTT+GGG | + | chr7.2:5308481-5308500 | None:intergenic | 40.0% | |
ATTGCCAATGGATGATGAAC+GGG | + | chr7.2:5307582-5307601 | None:intergenic | 40.0% | |
ATTTACATCCGTTCCCTTGT+TGG | - | chr7.2:5311184-5311203 | MS.gene07013:intron | 40.0% | |
CACAAAAGGAGGCAAAACTA+TGG | + | chr7.2:5307286-5307305 | None:intergenic | 40.0% | |
CACACATATAAAGGCCATGT+AGG | - | chr7.2:5307689-5307708 | MS.gene07013:intron | 40.0% | |
CAGGAGGATCATCTTAAAGA+TGG | - | chr7.2:5306239-5306258 | MS.gene07013:CDS | 40.0% | |
CATTCTTAAGTTCCGCGATT+TGG | - | chr7.2:5311147-5311166 | MS.gene07013:CDS | 40.0% | |
CATTGCCAATGGATGATGAA+CGG | + | chr7.2:5307583-5307602 | None:intergenic | 40.0% | |
CCAAAAGCTTCATAGAAAGC+AGG | + | chr7.2:5310717-5310736 | None:intergenic | 40.0% | |
CGTTACATAGCAGATACAAG+AGG | - | chr7.2:5310597-5310616 | MS.gene07013:intron | 40.0% | |
CTATAATCTTCTCCATGGCA+AGG | - | chr7.2:5310337-5310356 | MS.gene07013:intron | 40.0% | |
CTTGCCATGGAGAAGATTAT+AGG | + | chr7.2:5310339-5310358 | None:intergenic | 40.0% | |
GAAACATATTTGACGAGAGG+TGG | + | chr7.2:5307625-5307644 | None:intergenic | 40.0% | |
GATCTTCTGATCACGTATCA+TGG | - | chr7.2:5310102-5310121 | MS.gene07013:intron | 40.0% | |
GATGAGCTTGAAAACATCCT+TGG | - | chr7.2:5306215-5306234 | MS.gene07013:CDS | 40.0% | |
GGAGAGAAATGAGTTCGTTA+CGG | + | chr7.2:5306053-5306072 | None:intergenic | 40.0% | |
GTTGTTATATTGTCCCCACA+TGG | - | chr7.2:5308218-5308237 | MS.gene07013:intron | 40.0% | |
GTTTCGCAACAAAGATTGCT+TGG | - | chr7.2:5307640-5307659 | MS.gene07013:intron | 40.0% | |
TAACATAAGGGATTGAACCC+TGG | - | chr7.2:5308434-5308453 | MS.gene07013:CDS | 40.0% | |
TATAACCAGCTACTACGACA+AGG | + | chr7.2:5310437-5310456 | None:intergenic | 40.0% | |
TCTCTAGTGTAGAAGGATCA+GGG | + | chr7.2:5308166-5308185 | None:intergenic | 40.0% | |
TCTGCATAAGTTTCCAGGAA+AGG | + | chr7.2:5308977-5308996 | None:intergenic | 40.0% | |
TCTTCCAGGAAGAATACTGT+TGG | - | chr7.2:5309792-5309811 | MS.gene07013:CDS | 40.0% | |
TGAACTCTGTCTCTGATACT+GGG | + | chr7.2:5306012-5306031 | None:intergenic | 40.0% | |
TGCAATCTCTTGGTATGTAC+TGG | + | chr7.2:5309529-5309548 | None:intergenic | 40.0% | |
TGCAATTTCTTCTCTGTCAC+TGG | + | chr7.2:5310475-5310494 | None:intergenic | 40.0% | |
TGCGAAACATATTTGACGAG+AGG | + | chr7.2:5307628-5307647 | None:intergenic | 40.0% | |
TTACAAAATGGGAGTTACCC+AGG | - | chr7.2:5309260-5309279 | MS.gene07013:intron | 40.0% | |
TTACCTCTGCATAAGTTTCC+AGG | + | chr7.2:5308982-5309001 | None:intergenic | 40.0% | |
TTCCAAACTTCAGTCTGCTT+TGG | - | chr7.2:5307868-5307887 | MS.gene07013:CDS | 40.0% | |
TTCTCCGTAAATGGATCTCA+AGG | - | chr7.2:5308939-5308958 | MS.gene07013:intron | 40.0% | |
TTGAACTCTGTCTCTGATAC+TGG | + | chr7.2:5306013-5306032 | None:intergenic | 40.0% | |
TTTCCTGGAAACTTATGCAG+AGG | - | chr7.2:5308976-5308995 | MS.gene07013:intron | 40.0% | |
! | CAACATGTGTTGGTCCATAT+GGG | + | chr7.2:5306872-5306891 | None:intergenic | 40.0% |
! | CCTGCTTTCTATGAAGCTTT+TGG | - | chr7.2:5310714-5310733 | MS.gene07013:intron | 40.0% |
! | TTAGCGCTCTCCCTTTTATT+TGG | - | chr7.2:5309627-5309646 | MS.gene07013:intron | 40.0% |
! | TTCTGAAAGGCTTATGACCT+TGG | - | chr7.2:5311048-5311067 | MS.gene07013:intron | 40.0% |
!! | AATAGCTCTGAAGCTTTGTC+GGG | + | chr7.2:5310855-5310874 | None:intergenic | 40.0% |
!! | ATTTTGAAGGTATGTGGCTC+AGG | - | chr7.2:5306160-5306179 | MS.gene07013:intron | 40.0% |
!! | CATAGTTTTGCCTCCTTTTG+TGG | - | chr7.2:5307284-5307303 | MS.gene07013:intron | 40.0% |
!! | TTTTGAAGGTATGTGGCTCA+GGG | - | chr7.2:5306161-5306180 | MS.gene07013:intron | 40.0% |
!!! | TTTTCTTGGGAGAGTACCAA+TGG | - | chr7.2:5308187-5308206 | MS.gene07013:intron | 40.0% |
AAAAGACTCACAGCTCTGCA+TGG | - | chr7.2:5309954-5309973 | MS.gene07013:CDS | 45.0% | |
AAGCAGTGTGACTCTCATAC+TGG | + | chr7.2:5309818-5309837 | None:intergenic | 45.0% | |
AATGGGGTTTGAGAGAGGTT+GGG | - | chr7.2:5308082-5308101 | MS.gene07013:CDS | 45.0% | |
ACACAGGGATATGAGAGATG+TGG | + | chr7.2:5308513-5308532 | None:intergenic | 45.0% | |
ACATATTTGACGAGAGGTGG+CGG | + | chr7.2:5307622-5307641 | None:intergenic | 45.0% | |
ACTGCTATTGCCACAAAAGG+AGG | + | chr7.2:5307297-5307316 | None:intergenic | 45.0% | |
ACTTCAGTCTGCTTTGGTCA+AGG | - | chr7.2:5307874-5307893 | MS.gene07013:CDS | 45.0% | |
AGCAAAACTGAGACACTGCA+TGG | + | chr7.2:5306727-5306746 | None:intergenic | 45.0% | |
AGCGAGCATCTCATTCTCAA+GGG | + | chr7.2:5308652-5308671 | None:intergenic | 45.0% | |
ATCAGGTAATCCCAGGACAT+TGG | + | chr7.2:5308258-5308277 | None:intergenic | 45.0% | |
ATCAGTGGACCAACATGTGT+TGG | + | chr7.2:5306882-5306901 | None:intergenic | 45.0% | |
ATTTGAATGGCGAGTTTCGG+TGG | - | chr7.2:5310532-5310551 | MS.gene07013:intron | 45.0% | |
CAACACGACTTACCAAATCG+CGG | + | chr7.2:5311162-5311181 | None:intergenic | 45.0% | |
CAGAGACTAGAAAGAGTCAG+TGG | - | chr7.2:5308866-5308885 | MS.gene07013:intron | 45.0% | |
CATCTTAAAGATGGCCCCTT+TGG | - | chr7.2:5306248-5306267 | MS.gene07013:CDS | 45.0% | |
CATGGCAAGTGGCAAATGTA+GGG | + | chr7.2:5310773-5310792 | None:intergenic | 45.0% | |
CATGTTGTCCCCTTTGAATC+AGG | + | chr7.2:5308842-5308861 | None:intergenic | 45.0% | |
CCATATGGACCAACACATGT+TGG | - | chr7.2:5306870-5306889 | MS.gene07013:CDS | 45.0% | |
CGAACTGCTATTGCCACAAA+AGG | + | chr7.2:5307300-5307319 | None:intergenic | 45.0% | |
CGTTCATCATCCATTGGCAA+TGG | - | chr7.2:5307581-5307600 | MS.gene07013:intron | 45.0% | |
CTCCGTGCTCACACATATAA+AGG | - | chr7.2:5307680-5307699 | MS.gene07013:intron | 45.0% | |
CTCTAGTGTAGAAGGATCAG+GGG | + | chr7.2:5308165-5308184 | None:intergenic | 45.0% | |
CTTACGTTCCTGCAATCTCT+TGG | + | chr7.2:5309539-5309558 | None:intergenic | 45.0% | |
CTTTATATGTGTGAGCACGG+AGG | + | chr7.2:5307682-5307701 | None:intergenic | 45.0% | |
GAAACTATAAACACCCGCCA+AGG | + | chr7.2:5311068-5311087 | None:intergenic | 45.0% | |
GAACAGCAAATTGAGGGAAC+TGG | - | chr7.2:5310407-5310426 | MS.gene07013:intron | 45.0% | |
GACCAAAGCAGACTGAAGTT+TGG | + | chr7.2:5307873-5307892 | None:intergenic | 45.0% | |
GCTTGAAAACATCCTTGGTC+AGG | - | chr7.2:5306220-5306239 | MS.gene07013:CDS | 45.0% | |
GGACTTTATAGGGTTGTCCA+TGG | - | chr7.2:5309849-5309868 | MS.gene07013:intron | 45.0% | |
GGATCTCAAGGTTTGATGTC+TGG | - | chr7.2:5308951-5308970 | MS.gene07013:intron | 45.0% | |
GGCCTTTATATGTGTGAGCA+CGG | + | chr7.2:5307685-5307704 | None:intergenic | 45.0% | |
GTAAGGAGGATCCAAACCAT+TGG | - | chr7.2:5310895-5310914 | MS.gene07013:intron | 45.0% | |
GTCTCTAGTGTAGAAGGATC+AGG | + | chr7.2:5308167-5308186 | None:intergenic | 45.0% | |
TAAGATGATCCTCCTGACCA+AGG | + | chr7.2:5306235-5306254 | None:intergenic | 45.0% | |
TATTCCCAAACACCAGGTCT+TGG | + | chr7.2:5307324-5307343 | None:intergenic | 45.0% | |
TCTTTGTCTCTATGTGGCAG+CGG | - | chr7.2:5310291-5310310 | MS.gene07013:intron | 45.0% | |
TGAAAACATCCTTGGTCAGG+AGG | - | chr7.2:5306223-5306242 | MS.gene07013:CDS | 45.0% | |
TGAAAGGCTTATGACCTTGG+CGG | - | chr7.2:5311051-5311070 | MS.gene07013:CDS | 45.0% | |
TGGACAACCCTATAAAGTCC+AGG | + | chr7.2:5309849-5309868 | None:intergenic | 45.0% | |
TTGAGAATGAGATGCTCGCT+CGG | - | chr7.2:5308652-5308671 | MS.gene07013:CDS | 45.0% | |
! | ATGTGTTGGTCCATATGGGA+AGG | + | chr7.2:5306868-5306887 | None:intergenic | 45.0% |
! | CCAACATGTGTTGGTCCATA+TGG | + | chr7.2:5306873-5306892 | None:intergenic | 45.0% |
! | GAAGCTTTGTCGGGATGATA+AGG | + | chr7.2:5310846-5310865 | None:intergenic | 45.0% |
! | TGGCGGGTGTTTATAGTTTC+TGG | - | chr7.2:5311068-5311087 | MS.gene07013:CDS | 45.0% |
! | TTTGAAGGTATGTGGCTCAG+GGG | - | chr7.2:5306162-5306181 | MS.gene07013:intron | 45.0% |
! | TTTTGGACTTACGGTCGTAG+AGG | - | chr7.2:5310731-5310750 | MS.gene07013:intron | 45.0% |
!! | AGTTTCGCGCCTTTCAAGTT+TGG | + | chr7.2:5311104-5311123 | None:intergenic | 45.0% |
!! | CACACTGCTTTTACTCTTCC+TGG | - | chr7.2:5309828-5309847 | MS.gene07013:intron | 45.0% |
!! | CACTGACTCTTTCTAGTCTC+TGG | + | chr7.2:5308868-5308887 | None:intergenic | 45.0% |
!! | TGGTTAGTTTGTTAGGGGGA+GGG | - | chr7.2:5308403-5308422 | MS.gene07013:CDS | 45.0% |
AAAGCAGGCTGCAGCAAGAA+AGG | + | chr7.2:5310702-5310721 | None:intergenic | 50.0% | |
AACTCTGTCAAGCCTTGCCA+TGG | + | chr7.2:5310352-5310371 | None:intergenic | 50.0% | |
AATACCTGTCCGCCAGTATC+AGG | + | chr7.2:5308275-5308294 | None:intergenic | 50.0% | |
AGAGACGATGCATCTGCTGT+TGG | - | chr7.2:5308127-5308146 | MS.gene07013:CDS | 50.0% | |
AGCACGGAGGAAATCAAGCA+AGG | + | chr7.2:5307669-5307688 | None:intergenic | 50.0% | |
ATAGCAGTTCGTCCAAGACC+TGG | - | chr7.2:5307309-5307328 | MS.gene07013:intron | 50.0% | |
ATGGGGTTTGAGAGAGGTTG+GGG | - | chr7.2:5308083-5308102 | MS.gene07013:CDS | 50.0% | |
CAAGGAATGGGGTTTGAGAG+AGG | - | chr7.2:5308077-5308096 | MS.gene07013:CDS | 50.0% | |
CATGTACTCATCGGTCTGCT+CGG | + | chr7.2:5310006-5310025 | None:intergenic | 50.0% | |
CCAACCCGTTCATCATCCAT+TGG | - | chr7.2:5307575-5307594 | MS.gene07013:intron | 50.0% | |
CCAATGGATGATGAACGGGT+TGG | + | chr7.2:5307578-5307597 | None:intergenic | 50.0% | |
CCATGGCAAGTGGCAAATGT+AGG | + | chr7.2:5310774-5310793 | None:intergenic | 50.0% | |
CCATTCTCGATGATCTCAGC+AGG | + | chr7.2:5310801-5310820 | None:intergenic | 50.0% | |
CCTGCTGAGATCATCGAGAA+TGG | - | chr7.2:5310798-5310817 | MS.gene07013:intron | 50.0% | |
CGGACATATTCCCAAACACC+AGG | + | chr7.2:5307330-5307349 | None:intergenic | 50.0% | |
CTGGCCAACAGTATTCTTCC+TGG | + | chr7.2:5309799-5309818 | None:intergenic | 50.0% | |
CTGGGATTACCTGATACTGG+CGG | - | chr7.2:5308263-5308282 | MS.gene07013:intron | 50.0% | |
CTTGCCCAAAGAAGCCATGT+GGG | + | chr7.2:5308235-5308254 | None:intergenic | 50.0% | |
GAAAGGCTTATGACCTTGGC+GGG | - | chr7.2:5311052-5311071 | MS.gene07013:CDS | 50.0% | |
GAATGGGGTTTGAGAGAGGT+TGG | - | chr7.2:5308081-5308100 | MS.gene07013:CDS | 50.0% | |
GAGCGAGCATCTCATTCTCA+AGG | + | chr7.2:5308653-5308672 | None:intergenic | 50.0% | |
GCACGGAGGAAATCAAGCAA+GGG | + | chr7.2:5307668-5307687 | None:intergenic | 50.0% | |
GGAATCAACCAAGGGACACA+GGG | + | chr7.2:5308528-5308547 | None:intergenic | 50.0% | |
GTCAACCTTGTCGTAGTAGC+TGG | - | chr7.2:5310429-5310448 | MS.gene07013:intron | 50.0% | |
GTCCTGGGATTACCTGATAC+TGG | - | chr7.2:5308260-5308279 | MS.gene07013:intron | 50.0% | |
GTGCACAATCGCACATGCAT+TGG | - | chr7.2:5309386-5309405 | MS.gene07013:intron | 50.0% | |
TCGTCCAAGACCTGGTGTTT+GGG | - | chr7.2:5307317-5307336 | MS.gene07013:intron | 50.0% | |
TCTCATATCCCTGTGTCCCT+TGG | - | chr7.2:5308517-5308536 | MS.gene07013:intron | 50.0% | |
TGAAGGAGTAAGGAGGTCCA+GGG | + | chr7.2:5308454-5308473 | None:intergenic | 50.0% | |
TGGAATCAACCAAGGGACAC+AGG | + | chr7.2:5308529-5308548 | None:intergenic | 50.0% | |
TGTCCCCACATGGCTTCTTT+GGG | - | chr7.2:5308228-5308247 | MS.gene07013:intron | 50.0% | |
TTCGTCCAAGACCTGGTGTT+TGG | - | chr7.2:5307316-5307335 | MS.gene07013:intron | 50.0% | |
TTGCCCAAAGAAGCCATGTG+GGG | + | chr7.2:5308234-5308253 | None:intergenic | 50.0% | |
TTGTCCCCACATGGCTTCTT+TGG | - | chr7.2:5308227-5308246 | MS.gene07013:intron | 50.0% | |
TTTGCGTCATCCGTTGCTAG+TGG | + | chr7.2:5311341-5311360 | None:intergenic | 50.0% | |
TTTGGGCAAGCCAATGTCCT+GGG | - | chr7.2:5308245-5308264 | MS.gene07013:intron | 50.0% | |
! | ACATTTGCCACTTGCCATGG+TGG | - | chr7.2:5310774-5310793 | MS.gene07013:intron | 50.0% |
! | ATTACCTGATACTGGCGGAC+AGG | - | chr7.2:5308268-5308287 | MS.gene07013:intron | 50.0% |
! | CCTACATTTGCCACTTGCCA+TGG | - | chr7.2:5310771-5310790 | MS.gene07013:intron | 50.0% |
! | GTTTGATGTCTGGCCTTTCC+TGG | - | chr7.2:5308961-5308980 | MS.gene07013:intron | 50.0% |
! | TCGTAGAGGCCATGACTTGT+GGG | - | chr7.2:5310745-5310764 | MS.gene07013:intron | 50.0% |
! | TTGAAAGGCGCGAAACTCGA+CGG | - | chr7.2:5311107-5311126 | MS.gene07013:CDS | 50.0% |
!! | GCATGGAGAAGAAGTGTTGC+AGG | + | chr7.2:5306710-5306729 | None:intergenic | 50.0% |
!! | GGTTAGTTTGTTAGGGGGAG+GGG | - | chr7.2:5308404-5308423 | MS.gene07013:CDS | 50.0% |
!! | GTGGTTAGTTTGTTAGGGGG+AGG | - | chr7.2:5308402-5308421 | MS.gene07013:CDS | 50.0% |
!! | TACAAGAGGCGCTTTCGTTC+AGG | - | chr7.2:5310611-5310630 | MS.gene07013:intron | 50.0% |
AGGTATGTGGCTCAGGGGAA+AGG | - | chr7.2:5306167-5306186 | MS.gene07013:intron | 55.0% | |
CGCCAGTATCAGGTAATCCC+AGG | + | chr7.2:5308265-5308284 | None:intergenic | 55.0% | |
CTCGCTCGGATCCAGAAACA+AGG | - | chr7.2:5308666-5308685 | MS.gene07013:CDS | 55.0% | |
CTGAAGGAGTAAGGAGGTCC+AGG | + | chr7.2:5308455-5308474 | None:intergenic | 55.0% | |
CTTTGGGCAAGCCAATGTCC+TGG | - | chr7.2:5308244-5308263 | MS.gene07013:intron | 55.0% | |
GCTTGCCCAAAGAAGCCATG+TGG | + | chr7.2:5308236-5308255 | None:intergenic | 55.0% | |
GGTATGTGGCTCAGGGGAAA+GGG | - | chr7.2:5306168-5306187 | MS.gene07013:intron | 55.0% | |
GTCGTAGAGGCCATGACTTG+TGG | - | chr7.2:5310744-5310763 | MS.gene07013:intron | 55.0% | |
GTTGGGACGCTGAAGGAGTA+AGG | + | chr7.2:5308464-5308483 | None:intergenic | 55.0% | |
TCTATGTGGCAGCGGTTCTC+TGG | - | chr7.2:5310299-5310318 | MS.gene07013:intron | 55.0% | |
TGATCTCAGCAGGACCACCA+TGG | + | chr7.2:5310791-5310810 | None:intergenic | 55.0% | |
TGTAGGGAGCCCACAAGTCA+TGG | + | chr7.2:5310757-5310776 | None:intergenic | 55.0% | |
!! | GATGATGAACGGGTTGGACG+AGG | + | chr7.2:5307572-5307591 | None:intergenic | 55.0% |
AGCAGGACCACCATGGCAAG+TGG | + | chr7.2:5310784-5310803 | None:intergenic | 60.0% | |
GGGACGCTGAAGGAGTAAGG+AGG | + | chr7.2:5308461-5308480 | None:intergenic | 60.0% | |
GTCTGCTTTGGTCAAGGCCG+AGG | - | chr7.2:5307880-5307899 | MS.gene07013:CDS | 60.0% | |
GTTCAGGGTTGGGACGCTGA+AGG | + | chr7.2:5308471-5308490 | None:intergenic | 60.0% | |
GTTGGGGTGATACTGCTGCG+CGG | - | chr7.2:5308099-5308118 | MS.gene07013:CDS | 60.0% | |
TTGGGGTGATACTGCTGCGC+GGG | - | chr7.2:5308100-5308119 | MS.gene07013:CDS | 60.0% | |
GCAGCGGTTCTCTGGCAGAC+CGG | - | chr7.2:5310307-5310326 | MS.gene07013:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 5305979 | 5311364 | 5305979 | ID=MS.gene07013 |
chr7.2 | mRNA | 5305979 | 5311364 | 5305979 | ID=MS.gene07013.t1;Parent=MS.gene07013 |
chr7.2 | exon | 5311264 | 5311364 | 5311264 | ID=MS.gene07013.t1.exon1;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5311264 | 5311364 | 5311264 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5311051 | 5311174 | 5311051 | ID=MS.gene07013.t1.exon2;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5311051 | 5311174 | 5311051 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5309913 | 5310064 | 5309913 | ID=MS.gene07013.t1.exon3;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5309913 | 5310064 | 5309913 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5309637 | 5309829 | 5309637 | ID=MS.gene07013.t1.exon4;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5309637 | 5309829 | 5309637 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5309389 | 5309507 | 5309389 | ID=MS.gene07013.t1.exon5;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5309389 | 5309507 | 5309389 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5309054 | 5309270 | 5309054 | ID=MS.gene07013.t1.exon6;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5309054 | 5309270 | 5309054 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5308627 | 5308722 | 5308627 | ID=MS.gene07013.t1.exon7;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5308627 | 5308722 | 5308627 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5308346 | 5308519 | 5308346 | ID=MS.gene07013.t1.exon8;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5308346 | 5308519 | 5308346 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5308062 | 5308178 | 5308062 | ID=MS.gene07013.t1.exon9;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5308062 | 5308178 | 5308062 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5307790 | 5307956 | 5307790 | ID=MS.gene07013.t1.exon10;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5307790 | 5307956 | 5307790 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5307319 | 5307543 | 5307319 | ID=MS.gene07013.t1.exon11;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5307319 | 5307543 | 5307319 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5306711 | 5307032 | 5306711 | ID=MS.gene07013.t1.exon12;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5306711 | 5307032 | 5306711 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5306385 | 5306629 | 5306385 | ID=MS.gene07013.t1.exon13;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5306385 | 5306629 | 5306385 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5306175 | 5306313 | 5306175 | ID=MS.gene07013.t1.exon14;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5306175 | 5306313 | 5306175 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
chr7.2 | exon | 5305979 | 5306017 | 5305979 | ID=MS.gene07013.t1.exon15;Parent=MS.gene07013.t1 |
chr7.2 | CDS | 5305979 | 5306017 | 5305979 | ID=cds.MS.gene07013.t1;Parent=MS.gene07013.t1 |
Gene Sequence |
Protein sequence |