Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017800.t1 | XP_003625059.1 | 96.6 | 413 | 7 | 1 | 1 | 406 | 1 | 413 | 9.80E-232 | 812.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017800.t1 | O48917 | 75.7 | 416 | 86 | 5 | 1 | 405 | 1 | 412 | 1.4e-178 | 627.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017800.t1 | G7KRQ8 | 96.6 | 413 | 7 | 1 | 1 | 406 | 1 | 413 | 7.1e-232 | 812.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene017800 | MS.gene016107 | PPI |
| MS.gene058467 | MS.gene017800 | PPI |
| MS.gene017800 | MS.gene051502 | PPI |
| MS.gene33101 | MS.gene017800 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017800.t1 | MTR_7g090510 | 96.610 | 413 | 7 | 1 | 1 | 406 | 1 | 413 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017800.t1 | AT4G33030 | 75.721 | 416 | 86 | 5 | 1 | 405 | 1 | 412 | 0.0 | 637 |
Find 104 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACTATGATGCAATATT+TGG | 0.140392 | 7.3:-18616265 | MS.gene017800:CDS |
| CTGATGCTGTTGTCCATTTC+GGG | 0.173565 | 7.3:-18616681 | MS.gene017800:CDS |
| ATTACTCGCTTCGGTTTAAA+AGG | 0.187741 | 7.3:+18616961 | None:intergenic |
| CCTTCCTCAATATCAATATT+TGG | 0.201469 | 7.3:+18616499 | None:intergenic |
| CCTGATGCTGTTGTCCATTT+CGG | 0.263402 | 7.3:-18616682 | MS.gene017800:CDS |
| CTGAATCAAGGAGTGGTATA+TGG | 0.263921 | 7.3:-18616334 | MS.gene017800:CDS |
| CGCAAGAAAAGCCGTCTAAA+TGG | 0.286049 | 7.3:+18617075 | None:intergenic |
| AGCTTTCACTTGCAAAGCTT+GGG | 0.304992 | 7.3:-18616374 | MS.gene017800:CDS |
| TAGTTTGAACCGGGGCTTCC+TGG | 0.305214 | 7.3:+18616995 | None:intergenic |
| TGCAAGTGAAAGCTATGTTA+TGG | 0.335168 | 7.3:+18616383 | None:intergenic |
| TGCATGAAGAGTTGTGTAAC+AGG | 0.360759 | 7.3:-18616288 | MS.gene017800:CDS |
| GCCCCGGTTCAAACTAGTTC+TGG | 0.371819 | 7.3:-18616988 | MS.gene017800:CDS |
| CTCATAGGACTTGAAGGTTT+CGG | 0.374096 | 7.3:+18616705 | None:intergenic |
| CGATCCTGGATGGAGGAAAT+TGG | 0.387488 | 7.3:+18616805 | None:intergenic |
| GCAAGTGAAAGCTATGTTAT+GGG | 0.394552 | 7.3:+18616384 | None:intergenic |
| TAAAATGAGCTAGCTTGCTT+TGG | 0.399512 | 7.3:+18616430 | None:intergenic |
| TCCAACACTGAATGCGATCC+TGG | 0.403609 | 7.3:+18616791 | None:intergenic |
| CGGATCGCTGTTCCCCGAAA+TGG | 0.410099 | 7.3:+18616668 | None:intergenic |
| TAGCTTTCACTTGCAAAGCT+TGG | 0.414968 | 7.3:-18616375 | MS.gene017800:CDS |
| ATTGAATCGGTTCTGTGTTC+AGG | 0.420146 | 7.3:-18616236 | MS.gene017800:CDS |
| CCGAAATGGACAACAGCATC+AGG | 0.432925 | 7.3:+18616682 | None:intergenic |
| TTGAAGACTCTGAACTCTCC+AGG | 0.434551 | 7.3:+18616060 | None:intergenic |
| TACGAAAGCTGGCGAGAAGT+TGG | 0.440566 | 7.3:-18615992 | MS.gene017800:CDS |
| ACAGAAACCAAGGAAAAGTT+TGG | 0.443218 | 7.3:-18617049 | MS.gene017800:CDS |
| ATCAGGCTCATAGGACTTGA+AGG | 0.444397 | 7.3:+18616699 | None:intergenic |
| TGAATCAAGGAGTGGTATAT+GGG | 0.446459 | 7.3:-18616333 | MS.gene017800:CDS |
| TCTAGGGCTAGGCACTGATA+TGG | 0.447809 | 7.3:+18615954 | None:intergenic |
| CTGAACTCTCCAGGGTTAGC+CGG | 0.447834 | 7.3:+18616069 | None:intergenic |
| CTAGTCAAGCTTGGGACAAT+GGG | 0.448728 | 7.3:-18616535 | MS.gene017800:CDS |
| TTCTGTGTTCAGGCTGCTGT+TGG | 0.451203 | 7.3:-18616226 | MS.gene017800:CDS |
| CCTCGTAACCTTTGTTAGAA+AGG | 0.451936 | 7.3:+18616893 | None:intergenic |
| CCAATGACCATTACTCGCTT+CGG | 0.452722 | 7.3:+18616952 | None:intergenic |
| GATGTTGAGCATTGGTGAAA+AGG | 0.453224 | 7.3:+18617135 | None:intergenic |
| AGCCCTAGAGTGGAAGTTAG+AGG | 0.463349 | 7.3:-18615940 | MS.gene017800:CDS |
| ACGAAAGCTGGCGAGAAGTT+GGG | 0.464218 | 7.3:-18615991 | MS.gene017800:CDS |
| TCGCCAGAACTAGTTTGAAC+CGG | 0.465526 | 7.3:+18616985 | None:intergenic |
| TTCTACAGTTTCAACTGGCC+AGG | 0.466150 | 7.3:-18617013 | MS.gene017800:CDS |
| GCTCCTCTAACTTCCACTCT+AGG | 0.467611 | 7.3:+18615937 | None:intergenic |
| CTTGGGACAATGGGTGAATA+CGG | 0.477903 | 7.3:-18616526 | MS.gene017800:CDS |
| AATGCTTCTACAGTTTCAAC+TGG | 0.486284 | 7.3:-18617018 | MS.gene017800:CDS |
| CAGTGTTGGAAATCTCTCAC+TGG | 0.491751 | 7.3:-18616778 | MS.gene017800:CDS |
| TATTTGGAACTGCATTGAAT+CGG | 0.493431 | 7.3:-18616249 | MS.gene017800:CDS |
| GACAACAGCATCAGGCTCAT+AGG | 0.494062 | 7.3:+18616690 | None:intergenic |
| GCTGAACTTGTTACGAAAGC+TGG | 0.498584 | 7.3:-18616003 | MS.gene017800:CDS |
| TGAACTCTCCAGGGTTAGCC+GGG | 0.498798 | 7.3:+18616070 | None:intergenic |
| CCGAAGCGAGTAATGGTCAT+TGG | 0.499010 | 7.3:-18616952 | MS.gene017800:CDS |
| CACAGCAAAACAATGTTGTC+GGG | 0.499040 | 7.3:-18616606 | MS.gene017800:CDS |
| CACACCAATTTCCTCCATCC+AGG | 0.500313 | 7.3:-18616809 | MS.gene017800:CDS |
| CGCCAGAACTAGTTTGAACC+GGG | 0.501193 | 7.3:+18616986 | None:intergenic |
| AACCTTTGTTAGAAAGGTGG+AGG | 0.503426 | 7.3:+18616899 | None:intergenic |
| GAGCTAGCTTGCTTTGGATA+CGG | 0.506316 | 7.3:+18616436 | None:intergenic |
| ATTGTCATCTAGTCAAGCTT+GGG | 0.509144 | 7.3:-18616543 | MS.gene017800:CDS |
| CCAAATATTGATATTGAGGA+AGG | 0.509151 | 7.3:-18616499 | MS.gene017800:CDS |
| GACCGGTCTATCATAGAGTA+AGG | 0.509269 | 7.3:+18616643 | None:intergenic |
| AACTCCAAATATTGATATTG+AGG | 0.510539 | 7.3:-18616503 | MS.gene017800:CDS |
| GTAATGGTCATTGGTGGAGA+TGG | 0.511804 | 7.3:-18616943 | MS.gene017800:CDS |
| TCTAGTCAAGCTTGGGACAA+TGG | 0.511865 | 7.3:-18616536 | MS.gene017800:CDS |
| GATTGTCATCTAGTCAAGCT+TGG | 0.511909 | 7.3:-18616544 | MS.gene017800:CDS |
| TGAGCTTGCCATTGCAAACC+CGG | 0.515121 | 7.3:-18616088 | MS.gene017800:CDS |
| TTCAACTGGCCAGGAAGCCC+CGG | 0.518120 | 7.3:-18617004 | MS.gene017800:CDS |
| CTCCTTACTCTATGATAGAC+CGG | 0.525170 | 7.3:-18616645 | MS.gene017800:CDS |
| CTCCTCTAACTTCCACTCTA+GGG | 0.530308 | 7.3:+18615938 | None:intergenic |
| TTACTCGCTTCGGTTTAAAA+GGG | 0.531134 | 7.3:+18616962 | None:intergenic |
| ATTGCAAACCCGGCTAACCC+TGG | 0.532722 | 7.3:-18616078 | MS.gene017800:CDS |
| GTGTATACACAGCTCTTGAC+CGG | 0.533184 | 7.3:+18616626 | None:intergenic |
| ACACAGCAAAACAATGTTGT+CGG | 0.535211 | 7.3:-18616607 | MS.gene017800:CDS |
| CGGGCAACTGATCTGAATCA+AGG | 0.540528 | 7.3:-18616346 | MS.gene017800:CDS |
| TGGAGATGGATACTGTGGTT+GGG | 0.542951 | 7.3:-18616929 | MS.gene017800:CDS |
| TAAACAAGGTTTGTTTGAAG+CGG | 0.550343 | 7.3:+18617161 | None:intergenic |
| GCTTTCACTTGCAAAGCTTG+GGG | 0.550528 | 7.3:-18616373 | MS.gene017800:CDS |
| GTGGAGATGGATACTGTGGT+TGG | 0.563462 | 7.3:-18616930 | MS.gene017800:CDS |
| ACACTGAATGCGATCCTGGA+TGG | 0.563966 | 7.3:+18616795 | None:intergenic |
| TCCAGGATCGCATTCAGTGT+TGG | 0.567073 | 7.3:-18616792 | MS.gene017800:CDS |
| TGTCCTTCCGTTGTGAGTGA+TGG | 0.571830 | 7.3:+18616468 | None:intergenic |
| AGGGTTAGCCGGGTTTGCAA+TGG | 0.573221 | 7.3:+18616080 | None:intergenic |
| CGTAACCTTTGTTAGAAAGG+TGG | 0.578750 | 7.3:+18616896 | None:intergenic |
| ATCAGTGCCTAGCCCTAGAG+TGG | 0.579733 | 7.3:-18615950 | MS.gene017800:CDS |
| AAAAGTATTGAGCTATACAT+TGG | 0.580925 | 7.3:-18616754 | MS.gene017800:CDS |
| TAGAAAATGATGTTGAGCAT+TGG | 0.583068 | 7.3:+18617127 | None:intergenic |
| AAGCGAGTAATGGTCATTGG+TGG | 0.585308 | 7.3:-18616949 | MS.gene017800:CDS |
| AGTGTTGGAAATCTCTCACT+GGG | 0.586597 | 7.3:-18616777 | MS.gene017800:CDS |
| CCTTTCTAACAAAGGTTACG+AGG | 0.587127 | 7.3:-18616893 | MS.gene017800:CDS |
| CCTATACCATATACAGTGAG+TGG | 0.594076 | 7.3:+18616199 | None:intergenic |
| GTTTGAAGCGGAGAAAGTCA+AGG | 0.597796 | 7.3:+18617173 | None:intergenic |
| CTTTCACTTGCAAAGCTTGG+GGG | 0.598323 | 7.3:-18616372 | MS.gene017800:CDS |
| TGAGAGAATCTAGTCCAAGC+TGG | 0.600491 | 7.3:+18616830 | None:intergenic |
| GCCCTCCACCTTTCTAACAA+AGG | 0.602875 | 7.3:-18616901 | MS.gene017800:CDS |
| CTAACTTCCACTCTAGGGCT+AGG | 0.605721 | 7.3:+18615943 | None:intergenic |
| ACCTTTGTTAGAAAGGTGGA+GGG | 0.612052 | 7.3:+18616900 | None:intergenic |
| TCGAACAAGGTTGTCAACAA+TGG | 0.614328 | 7.3:+18616867 | None:intergenic |
| GAACTGTATCACTTATGTCA+AGG | 0.615118 | 7.3:+18616118 | None:intergenic |
| TGAAGACTCTGAACTCTCCA+GGG | 0.617358 | 7.3:+18616061 | None:intergenic |
| TGATGCTGTTGTCCATTTCG+GGG | 0.617432 | 7.3:-18616680 | MS.gene017800:CDS |
| TTACCATCACTCACAACGGA+AGG | 0.617927 | 7.3:-18616471 | MS.gene017800:CDS |
| CTGAATGCGATCCTGGATGG+AGG | 0.618262 | 7.3:+18616798 | None:intergenic |
| TGTATCACTTATGTCAAGGA+AGG | 0.625748 | 7.3:+18616122 | None:intergenic |
| TCTTGCGTGAACAGAAACCA+AGG | 0.650022 | 7.3:-18617059 | MS.gene017800:CDS |
| GTCTATCATAGAGTAAGGAG+CGG | 0.663083 | 7.3:+18616648 | None:intergenic |
| GAATCAAGGAGTGGTATATG+GGG | 0.664294 | 7.3:-18616332 | MS.gene017800:CDS |
| AACTGATCTGAATCAAGGAG+TGG | 0.668884 | 7.3:-18616341 | MS.gene017800:CDS |
| ATTGGTGGAGATGGATACTG+TGG | 0.674313 | 7.3:-18616934 | MS.gene017800:CDS |
| TATATTACCATCACTCACAA+CGG | 0.680492 | 7.3:-18616475 | MS.gene017800:CDS |
| GCCAGAACTAGTTTGAACCG+GGG | 0.700751 | 7.3:+18616987 | None:intergenic |
| TGCTATAAAAGAGTACAGAG+AGG | 0.711022 | 7.3:-18616566 | MS.gene017800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AACTCCAAATATTGATATTG+AGG | - | chr7.3:18616610-18616629 | MS.gene017800:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | - | chr7.3:18616848-18616867 | MS.gene017800:CDS | 25.0% |
| !! | CTCATTTTATCATTTAAGCA+AGG | - | chr7.3:18616697-18616716 | MS.gene017800:CDS | 25.0% |
| !!! | AAAAGTATTGAGCTATACAT+TGG | - | chr7.3:18616359-18616378 | MS.gene017800:CDS | 25.0% |
| ACTCCAAAAATCCATTTAGA+CGG | - | chr7.3:18616027-18616046 | MS.gene017800:CDS | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | - | chr7.3:18616614-18616633 | MS.gene017800:CDS | 30.0% | |
| CCTTCCTCAATATCAATATT+TGG | + | chr7.3:18616617-18616636 | None:intergenic | 30.0% | |
| TAGAAAATGATGTTGAGCAT+TGG | + | chr7.3:18615989-18616008 | None:intergenic | 30.0% | |
| TATATTACCATCACTCACAA+CGG | - | chr7.3:18616638-18616657 | MS.gene017800:CDS | 30.0% | |
| ! | CTCAACATCATTTTCTAACA+CGG | - | chr7.3:18615992-18616011 | MS.gene017800:CDS | 30.0% |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | + | chr7.3:18615955-18615974 | None:intergenic | 30.0% |
| ! | TATTTGGAACTGCATTGAAT+CGG | - | chr7.3:18616864-18616883 | MS.gene017800:CDS | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | + | chr7.3:18615969-18615988 | None:intergenic | 30.0% |
| AATGCTTCTACAGTTTCAAC+TGG | - | chr7.3:18616095-18616114 | MS.gene017800:CDS | 35.0% | |
| ACACAGCAAAACAATGTTGT+CGG | - | chr7.3:18616506-18616525 | MS.gene017800:CDS | 35.0% | |
| ACAGAAACCAAGGAAAAGTT+TGG | - | chr7.3:18616064-18616083 | MS.gene017800:CDS | 35.0% | |
| AGTAACATGCAAATATTGCC+TGG | + | chr7.3:18616943-18616962 | None:intergenic | 35.0% | |
| ATTACTCGCTTCGGTTTAAA+AGG | + | chr7.3:18616155-18616174 | None:intergenic | 35.0% | |
| ATTGTCATCTAGTCAAGCTT+GGG | - | chr7.3:18616570-18616589 | MS.gene017800:CDS | 35.0% | |
| GAACTGTATCACTTATGTCA+AGG | + | chr7.3:18616998-18617017 | None:intergenic | 35.0% | |
| GATTCACATGTTTCAGACTA+GGG | - | chr7.3:18616968-18616987 | MS.gene017800:CDS | 35.0% | |
| GCAAGTGAAAGCTATGTTAT+GGG | + | chr7.3:18616732-18616751 | None:intergenic | 35.0% | |
| TGAATCAAGGAGTGGTATAT+GGG | - | chr7.3:18616780-18616799 | MS.gene017800:CDS | 35.0% | |
| TGATTCACATGTTTCAGACT+AGG | - | chr7.3:18616967-18616986 | MS.gene017800:CDS | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | + | chr7.3:18616733-18616752 | None:intergenic | 35.0% | |
| TGTATCACTTATGTCAAGGA+AGG | + | chr7.3:18616994-18617013 | None:intergenic | 35.0% | |
| TTACTCGCTTCGGTTTAAAA+GGG | + | chr7.3:18616154-18616173 | None:intergenic | 35.0% | |
| ! | CTGATATGGTTTTCACATCA+AGG | + | chr7.3:18617148-18617167 | None:intergenic | 35.0% |
| ! | TGCTATAAAAGAGTACAGAG+AGG | - | chr7.3:18616547-18616566 | MS.gene017800:CDS | 35.0% |
| ! | TTTTAAACCGAAGCGAGTAA+TGG | - | chr7.3:18616154-18616173 | MS.gene017800:intron | 35.0% |
| !! | AAGCCGTCTAAATGGATTTT+TGG | + | chr7.3:18616033-18616052 | None:intergenic | 35.0% |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | + | chr7.3:18616686-18616705 | None:intergenic | 35.0% |
| AACCTTTGTTAGAAAGGTGG+AGG | + | chr7.3:18616217-18616236 | None:intergenic | 40.0% | |
| AACTGATCTGAATCAAGGAG+TGG | - | chr7.3:18616772-18616791 | MS.gene017800:CDS | 40.0% | |
| ACCTTTGTTAGAAAGGTGGA+GGG | + | chr7.3:18616216-18616235 | None:intergenic | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | - | chr7.3:18616739-18616758 | MS.gene017800:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | - | chr7.3:18616507-18616526 | MS.gene017800:CDS | 40.0% | |
| CCACTCACTGTATATGGTAT+AGG | - | chr7.3:18616914-18616933 | MS.gene017800:CDS | 40.0% | |
| CCTATACCATATACAGTGAG+TGG | + | chr7.3:18616917-18616936 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | + | chr7.3:18616223-18616242 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | - | chr7.3:18616220-18616239 | MS.gene017800:CDS | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | + | chr7.3:18616220-18616239 | None:intergenic | 40.0% | |
| CTCACTGTATATGGTATAGG+AGG | - | chr7.3:18616917-18616936 | MS.gene017800:CDS | 40.0% | |
| CTCATAGGACTTGAAGGTTT+CGG | + | chr7.3:18616411-18616430 | None:intergenic | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | - | chr7.3:18616468-18616487 | MS.gene017800:CDS | 40.0% | |
| CTGAATCAAGGAGTGGTATA+TGG | - | chr7.3:18616779-18616798 | MS.gene017800:CDS | 40.0% | |
| GAATCAAGGAGTGGTATATG+GGG | - | chr7.3:18616781-18616800 | MS.gene017800:CDS | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | + | chr7.3:18616262-18616281 | None:intergenic | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | - | chr7.3:18616569-18616588 | MS.gene017800:CDS | 40.0% | |
| GTCTATCATAGAGTAAGGAG+CGG | + | chr7.3:18616468-18616487 | None:intergenic | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | - | chr7.3:18616738-18616757 | MS.gene017800:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | + | chr7.3:18616249-18616268 | None:intergenic | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | - | chr7.3:18616825-18616844 | MS.gene017800:CDS | 40.0% | |
| ! | ACAACTGCCAAACTTTTCCT+TGG | + | chr7.3:18616074-18616093 | None:intergenic | 40.0% |
| ! | AGTGTTGGAAATCTCTCACT+GGG | - | chr7.3:18616336-18616355 | MS.gene017800:CDS | 40.0% |
| ! | ATTGAATCGGTTCTGTGTTC+AGG | - | chr7.3:18616877-18616896 | MS.gene017800:CDS | 40.0% |
| !! | GATGTTGAGCATTGGTGAAA+AGG | + | chr7.3:18615981-18616000 | None:intergenic | 40.0% |
| AAGCGAGTAATGGTCATTGG+TGG | - | chr7.3:18616164-18616183 | MS.gene017800:intron | 45.0% | |
| ATCAGGCTCATAGGACTTGA+AGG | + | chr7.3:18616417-18616436 | None:intergenic | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | - | chr7.3:18616179-18616198 | MS.gene017800:intron | 45.0% | |
| CCAATGACCATTACTCGCTT+CGG | + | chr7.3:18616164-18616183 | None:intergenic | 45.0% | |
| CCTGATGCTGTTGTCCATTT+CGG | - | chr7.3:18616431-18616450 | MS.gene017800:CDS | 45.0% | |
| CGCAAGAAAAGCCGTCTAAA+TGG | + | chr7.3:18616041-18616060 | None:intergenic | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | - | chr7.3:18616578-18616597 | MS.gene017800:CDS | 45.0% | |
| CTCCTCTAACTTCCACTCTA+GGG | + | chr7.3:18617178-18617197 | None:intergenic | 45.0% | |
| CTGATGCTGTTGTCCATTTC+GGG | - | chr7.3:18616432-18616451 | MS.gene017800:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | - | chr7.3:18616587-18616606 | MS.gene017800:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | - | chr7.3:18616741-18616760 | MS.gene017800:CDS | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | + | chr7.3:18616473-18616492 | None:intergenic | 45.0% | |
| GCTTTCACTTGCAAAGCTTG+GGG | - | chr7.3:18616740-18616759 | MS.gene017800:CDS | 45.0% | |
| GGTCATCCACTCACTGTATA+TGG | - | chr7.3:18616908-18616927 | MS.gene017800:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | - | chr7.3:18616170-18616189 | MS.gene017800:intron | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | + | chr7.3:18616490-18616509 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | - | chr7.3:18616577-18616596 | MS.gene017800:CDS | 45.0% | |
| TCTTGCGTGAACAGAAACCA+AGG | - | chr7.3:18616054-18616073 | MS.gene017800:CDS | 45.0% | |
| TGAAGACTCTGAACTCTCCA+GGG | + | chr7.3:18617055-18617074 | None:intergenic | 45.0% | |
| TGAGAGAATCTAGTCCAAGC+TGG | + | chr7.3:18616286-18616305 | None:intergenic | 45.0% | |
| TGATGCTGTTGTCCATTTCG+GGG | - | chr7.3:18616433-18616452 | MS.gene017800:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | - | chr7.3:18616184-18616203 | MS.gene017800:intron | 45.0% | |
| TGTATATGGTATAGGAGGCC+AGG | - | chr7.3:18616922-18616941 | MS.gene017800:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | - | chr7.3:18616642-18616661 | MS.gene017800:CDS | 45.0% | |
| TTCTACAGTTTCAACTGGCC+AGG | - | chr7.3:18616100-18616119 | MS.gene017800:CDS | 45.0% | |
| TTGAAGACTCTGAACTCTCC+AGG | + | chr7.3:18617056-18617075 | None:intergenic | 45.0% | |
| ! | CAGTGTTGGAAATCTCTCAC+TGG | - | chr7.3:18616335-18616354 | MS.gene017800:CDS | 45.0% |
| ! | CGTCTTTTTGATCACCAGCT+TGG | - | chr7.3:18616269-18616288 | MS.gene017800:CDS | 45.0% |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | + | chr7.3:18615943-18615962 | None:intergenic | 45.0% |
| ! | TCGCCAGAACTAGTTTGAAC+CGG | + | chr7.3:18616131-18616150 | None:intergenic | 45.0% |
| !! | GAGCTAGCTTGCTTTGGATA+CGG | + | chr7.3:18616680-18616699 | None:intergenic | 45.0% |
| !! | GCTGAACTTGTTACGAAAGC+TGG | - | chr7.3:18617110-18617129 | MS.gene017800:CDS | 45.0% |
| ACACTGAATGCGATCCTGGA+TGG | + | chr7.3:18616321-18616340 | None:intergenic | 50.0% | |
| ACGAAAGCTGGCGAGAAGTT+GGG | - | chr7.3:18617122-18617141 | MS.gene017800:CDS | 50.0% | |
| AGCCCTAGAGTGGAAGTTAG+AGG | - | chr7.3:18617173-18617192 | MS.gene017800:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | - | chr7.3:18616304-18616323 | MS.gene017800:CDS | 50.0% | |
| CCGAAATGGACAACAGCATC+AGG | + | chr7.3:18616434-18616453 | None:intergenic | 50.0% | |
| CCGAAGCGAGTAATGGTCAT+TGG | - | chr7.3:18616161-18616180 | MS.gene017800:intron | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | + | chr7.3:18616311-18616330 | None:intergenic | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | - | chr7.3:18616767-18616786 | MS.gene017800:CDS | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | - | chr7.3:18616747-18616766 | MS.gene017800:CDS | 50.0% | |
| GACAACAGCATCAGGCTCAT+AGG | + | chr7.3:18616426-18616445 | None:intergenic | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | - | chr7.3:18616212-18616231 | MS.gene017800:intron | 50.0% | |
| GCTCCTCTAACTTCCACTCT+AGG | + | chr7.3:18617179-18617198 | None:intergenic | 50.0% | |
| GTGGAGATGGATACTGTGGT+TGG | - | chr7.3:18616183-18616202 | MS.gene017800:intron | 50.0% | |
| TACGAAAGCTGGCGAGAAGT+TGG | - | chr7.3:18617121-18617140 | MS.gene017800:CDS | 50.0% | |
| TCCAACACTGAATGCGATCC+TGG | + | chr7.3:18616325-18616344 | None:intergenic | 50.0% | |
| TCCAGGATCGCATTCAGTGT+TGG | - | chr7.3:18616321-18616340 | MS.gene017800:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | - | chr7.3:18617025-18617044 | MS.gene017800:CDS | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | + | chr7.3:18616648-18616667 | None:intergenic | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | - | chr7.3:18616887-18616906 | MS.gene017800:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | - | chr7.3:18616748-18616767 | MS.gene017800:CDS | 50.0% | |
| ! | CGCCAGAACTAGTTTGAACC+GGG | + | chr7.3:18616130-18616149 | None:intergenic | 50.0% |
| ! | GCCAGAACTAGTTTGAACCG+GGG | + | chr7.3:18616129-18616148 | None:intergenic | 50.0% |
| !! | CTAACTTCCACTCTAGGGCT+AGG | + | chr7.3:18617173-18617192 | None:intergenic | 50.0% |
| !! | TCTAGGGCTAGGCACTGATA+TGG | + | chr7.3:18617162-18617181 | None:intergenic | 50.0% |
| ATCAGTGCCTAGCCCTAGAG+TGG | - | chr7.3:18617163-18617182 | MS.gene017800:CDS | 55.0% | |
| ATTGCAAACCCGGCTAACCC+TGG | - | chr7.3:18617035-18617054 | MS.gene017800:CDS | 55.0% | |
| CTGAATGCGATCCTGGATGG+AGG | + | chr7.3:18616318-18616337 | None:intergenic | 55.0% | |
| GCCCCGGTTCAAACTAGTTC+TGG | - | chr7.3:18616125-18616144 | MS.gene017800:CDS | 55.0% | |
| TAGTTTGAACCGGGGCTTCC+TGG | + | chr7.3:18616121-18616140 | None:intergenic | 55.0% | |
| ! | CTGAACTCTCCAGGGTTAGC+CGG | + | chr7.3:18617047-18617066 | None:intergenic | 55.0% |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | + | chr7.3:18617036-18617055 | None:intergenic | 55.0% |
| !! | TGAACTCTCCAGGGTTAGCC+GGG | + | chr7.3:18617046-18617065 | None:intergenic | 55.0% |
| CGGATCGCTGTTCCCCGAAA+TGG | + | chr7.3:18616448-18616467 | None:intergenic | 60.0% | |
| TTCAACTGGCCAGGAAGCCC+CGG | - | chr7.3:18616109-18616128 | MS.gene017800:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 18615912 | 18617223 | 18615912 | ID=MS.gene017800 |
| chr7.3 | mRNA | 18615912 | 18617223 | 18615912 | ID=MS.gene017800.t1;Parent=MS.gene017800 |
| chr7.3 | exon | 18616213 | 18617223 | 18616213 | ID=MS.gene017800.t1.exon1;Parent=MS.gene017800.t1 |
| chr7.3 | CDS | 18616213 | 18617223 | 18616213 | ID=cds.MS.gene017800.t1;Parent=MS.gene017800.t1 |
| chr7.3 | exon | 18615912 | 18616151 | 18615912 | ID=MS.gene017800.t1.exon2;Parent=MS.gene017800.t1 |
| chr7.3 | CDS | 18615912 | 18616151 | 18615912 | ID=cds.MS.gene017800.t1;Parent=MS.gene017800.t1 |
| Gene Sequence |
| Protein sequence |
