AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018285

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018285.t1 MTR_6g015855 96.170 235 7 1 1 235 1 233 1.51e-165 456
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018285.t1 AT3G02220 60.714 224 81 4 4 225 2 220 4.88e-89 262

Find 41 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAATCTTGTTCTGATGTT+TGG 0.198438 6.2:-10686578 None:intergenic
GCAATCTTGTTCTGATGTTT+GGG 0.223992 6.2:-10686577 None:intergenic
TAATCTTCCAGGGAAGAATT+TGG 0.244391 6.2:-10688902 None:intergenic
TCTCTCGCTAGCGTTCTTAA+TGG 0.244660 6.2:-10688175 None:intergenic
TATCCTTAATCATTCATTCT+TGG 0.268459 6.2:-10689101 None:intergenic
ACTTACCAAAACACAAATTA+TGG 0.278010 6.2:-10687065 None:intergenic
GCTTACCATAATTTGTGTTT+TGG 0.291297 6.2:+10687060 MS.gene018285:CDS
AGTATCTTACAGCACGCAAT+AGG 0.314005 6.2:-10688209 None:intergenic
AGACCTTTATCTGAGATAAC+TGG 0.364849 6.2:+10686781 MS.gene018285:CDS
ATTGATTGGAAACGACGTTA+TGG 0.377560 6.2:+10686829 MS.gene018285:CDS
TTCTTGGCATTCACTTCATC+AGG 0.379537 6.2:-10689085 None:intergenic
TTGATCTTGATACCAGCATT+AGG 0.386924 6.2:-10686607 None:intergenic
ATGAGTGCCGGCAAGAAAAC+TGG 0.395264 6.2:+10686550 MS.gene018285:CDS
GCTGTAAGGAACAAATTGAT+TGG 0.439014 6.2:+10686815 MS.gene018285:CDS
TGGAGTGTGCCCTCGCTGTA+AGG 0.457705 6.2:+10686801 MS.gene018285:CDS
ACTCCAGTTATCTCAGATAA+AGG 0.465886 6.2:-10686784 None:intergenic
AACATCAGAACAAGATTGCT+TGG 0.468716 6.2:+10686581 MS.gene018285:CDS
AACACAAATTATGGTAAGCT+TGG 0.472000 6.2:-10687056 None:intergenic
ACAAAATAGTACCATTTGGC+AGG 0.479661 6.2:-10686874 None:intergenic
CACAATACAATACAGGAAGT+TGG 0.490286 6.2:+10686748 MS.gene018285:intron
ATTATTTCCAAATTCTTCCC+TGG 0.504619 6.2:+10688895 MS.gene018285:CDS
CTCTTCATGAACCTGCCAAA+TGG 0.510075 6.2:+10686863 MS.gene018285:CDS
TGCCGTGTGGAGCGTATAGT+TGG 0.518767 6.2:+10687795 MS.gene018285:CDS
GTATCTTACAGCACGCAATA+GGG 0.537608 6.2:-10688208 None:intergenic
GATACAAAAGATAACAAAGT+AGG 0.537979 6.2:+10688869 MS.gene018285:CDS
ATCTTGTTCTGATGTTTGGG+GGG 0.541127 6.2:-10686574 None:intergenic
CAATCTTGTTCTGATGTTTG+GGG 0.555523 6.2:-10686576 None:intergenic
CATTTGGCAGGTTCATGAAG+AGG 0.559116 6.2:-10686862 None:intergenic
TAGGGACGTTTCAGAAGTTG+AGG 0.568147 6.2:+10688000 MS.gene018285:intron
ATTGCTTGGAAACCTAATGC+TGG 0.569537 6.2:+10686595 MS.gene018285:CDS
CAATTTGTTCCTTACAGCGA+GGG 0.578776 6.2:-10686810 None:intergenic
TGCAAAATGTTGTTGCCGTG+TGG 0.586536 6.2:+10687782 MS.gene018285:CDS
AATCTTGTTCTGATGTTTGG+GGG 0.588157 6.2:-10686575 None:intergenic
GAAGTAGTGAAGATGAGTGC+CGG 0.594461 6.2:+10686538 None:intergenic
AATACAATACAGGAAGTTGG+AGG 0.627150 6.2:+10686751 MS.gene018285:intron
GTGTGGAGCGTATAGTTGGA+AGG 0.650040 6.2:+10687799 MS.gene018285:CDS
TTCCAACTATACGCTCCACA+CGG 0.655201 6.2:-10687797 None:intergenic
TCAATTTGTTCCTTACAGCG+AGG 0.657795 6.2:-10686811 None:intergenic
TGTTTGTGTAGGTTGTGCGA+AGG 0.667969 6.2:+10687746 MS.gene018285:intron
TGATGATGATGAAAGTGAGG+AGG 0.674180 6.2:+10688991 MS.gene018285:CDS
TGCGAGTGAAGAGTGTGACG+AGG 0.699343 6.2:+10689045 MS.gene018285:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATACAAATAATCAAAA+AGG - chr6.2:10687712-10687731 None:intergenic 10.0%
!! AATGTAAATATACAAAAAGA+AGG - chr6.2:10686906-10686925 None:intergenic 15.0%
!! AATTAGTATAAAACTGAAAA+TGG + chr6.2:10687681-10687700 MS.gene018285:intron 15.0%
!! ATTAGTATAAAACTGAAAAT+GGG + chr6.2:10687682-10687701 MS.gene018285:intron 15.0%
!! CATATCATACTAATATTAAT+AGG - chr6.2:10687447-10687466 None:intergenic 15.0%
!! CTAAATTATTAGTTGAATAT+GGG + chr6.2:10687155-10687174 MS.gene018285:intron 15.0%
!! CTATATTATGTTATTATGTT+AGG + chr6.2:10688419-10688438 MS.gene018285:intron 15.0%
!! CTATTAATATTAGTATGATA+TGG + chr6.2:10687445-10687464 MS.gene018285:intron 15.0%
!!! ATTATTTGTATTTTACTGAT+TGG + chr6.2:10687717-10687736 MS.gene018285:intron 15.0%
!!! TTGATCTTTCTTTTTATTTT+GGG + chr6.2:10687111-10687130 MS.gene018285:intron 15.0%
!!! TTTGATCTTTCTTTTTATTT+TGG + chr6.2:10687110-10687129 MS.gene018285:intron 15.0%
!! AAAAACAAAATAGTACCATT+TGG - chr6.2:10686881-10686900 None:intergenic 20.0%
!! CAAATTCAAATTAATAGTCT+TGG - chr6.2:10688316-10688335 None:intergenic 20.0%
!! GAAATATGATTGAACATTTA+AGG + chr6.2:10687636-10687655 MS.gene018285:intron 20.0%
!! GATTGATTAATTAGTTAACT+GGG + chr6.2:10686976-10686995 MS.gene018285:intron 20.0%
!! GCTAAATTATTAGTTGAATA+TGG + chr6.2:10687154-10687173 MS.gene018285:intron 20.0%
!! TAATATTAGTATGATATGGA+AGG + chr6.2:10687449-10687468 MS.gene018285:intron 20.0%
!! TGATTGATTAATTAGTTAAC+TGG + chr6.2:10686975-10686994 MS.gene018285:intron 20.0%
!!! ATATGAATTTTTCTTCTTGT+AGG + chr6.2:10687981-10688000 MS.gene018285:intron 20.0%
!!! ATTAAGTTGTTTATCCAAAA+GGG - chr6.2:10688481-10688500 None:intergenic 20.0%
!!! ATTGTTTTCATAAGCTTTTT+TGG + chr6.2:10688565-10688584 MS.gene018285:intron 20.0%
!!! GTTTTATACTAATTTCATCT+AGG - chr6.2:10687675-10687694 None:intergenic 20.0%
!!! TATGAATTTTTCTTCTTGTA+GGG + chr6.2:10687982-10688001 MS.gene018285:intron 20.0%
!!! TGATCTTTCTTTTTATTTTG+GGG + chr6.2:10687112-10687131 MS.gene018285:intron 20.0%
! AACAAGTCTAACATTCAAAA+GGG - chr6.2:10688105-10688124 None:intergenic 25.0%
! ACTTACCAAAACACAAATTA+TGG - chr6.2:10687068-10687087 None:intergenic 25.0%
! ATAAAAACAGTGAGTGTAAA+CGG + chr6.2:10687573-10687592 MS.gene018285:intron 25.0%
! ATGTTACAAACAAACTGAAT+TGG - chr6.2:10687883-10687902 None:intergenic 25.0%
! CAAATTATGTCATGATTAGA+TGG - chr6.2:10688286-10688305 None:intergenic 25.0%
! GATACAAAAGATAACAAAGT+AGG + chr6.2:10688869-10688888 MS.gene018285:CDS 25.0%
! GTTGAATATGGGAAAAAAAT+TGG + chr6.2:10687166-10687185 MS.gene018285:intron 25.0%
! TAAGTACTTATAAGACTGTT+TGG - chr6.2:10688655-10688674 None:intergenic 25.0%
! TATGATATGGAAGGAAATAA+TGG + chr6.2:10687458-10687477 MS.gene018285:intron 25.0%
! TGTAAAAAAATGAATAGCCT+TGG - chr6.2:10688239-10688258 None:intergenic 25.0%
! TTCATTTAATGTGAAAGACA+AGG - chr6.2:10687853-10687872 None:intergenic 25.0%
! TTGGAAAAGATTACGAAAAA+GGG - chr6.2:10688636-10688655 None:intergenic 25.0%
! TTTGGAAAAGATTACGAAAA+AGG - chr6.2:10688637-10688656 None:intergenic 25.0%
!! AAAAGAAAAAAGGGTGATTT+TGG - chr6.2:10686663-10686682 None:intergenic 25.0%
!! ATCTCTTTTCGTTGTATTTT+TGG + chr6.2:10688076-10688095 MS.gene018285:intron 25.0%
!! CATTAAGTTGTTTATCCAAA+AGG - chr6.2:10688482-10688501 None:intergenic 25.0%
!! GGGAAAAAAATTGGATTTTT+GGG + chr6.2:10687175-10687194 MS.gene018285:intron 25.0%
!! TGGGAAAAAAATTGGATTTT+TGG + chr6.2:10687174-10687193 MS.gene018285:intron 25.0%
!! TTGTTATCTTTTGTATCTGT+CGG - chr6.2:10688866-10688885 None:intergenic 25.0%
!! TTTTCCTTTGTTGAGTATTT+AGG - chr6.2:10687946-10687965 None:intergenic 25.0%
!!! ATAATGGATTTTTAGTAGTG+TGG + chr6.2:10687474-10687493 MS.gene018285:intron 25.0%
!!! ATTGGTTTTTATGTTTGTGT+AGG + chr6.2:10687735-10687754 MS.gene018285:intron 25.0%
!!! TTTGTTTTGTTCCCATTTTT+TGG + chr6.2:10686940-10686959 MS.gene018285:intron 25.0%
AACAATACAGTATGCAAACA+TGG - chr6.2:10688756-10688775 None:intergenic 30.0%
AACACAAATTATGGTAAGCT+TGG - chr6.2:10687059-10687078 None:intergenic 30.0%
ACAAAGGAAAAGATGAATCT+TGG + chr6.2:10687955-10687974 MS.gene018285:intron 30.0%
ACAAGTCTAACATTCAAAAG+GGG - chr6.2:10688104-10688123 None:intergenic 30.0%
ATCAACGAAATGCCAAAAAA+TGG - chr6.2:10686955-10686974 None:intergenic 30.0%
ATTATTTCCAAATTCTTCCC+TGG + chr6.2:10688895-10688914 MS.gene018285:CDS 30.0%
CAACAAACCAAACAACAAAA+AGG - chr6.2:10687006-10687025 None:intergenic 30.0%
GAACAAGTCTAACATTCAAA+AGG - chr6.2:10688106-10688125 None:intergenic 30.0%
GAAGATTATGCCAAAAAGAA+TGG + chr6.2:10688917-10688936 MS.gene018285:CDS 30.0%
GATTTGAACTAGTAACACAA+TGG + chr6.2:10687599-10687618 MS.gene018285:intron 30.0%
GTAATCACACAATACAATAC+AGG + chr6.2:10686741-10686760 MS.gene018285:intron 30.0%
GTAGAAACTCGAAATAATAC+TGG + chr6.2:10688137-10688156 MS.gene018285:intron 30.0%
TCAACGAAATGCCAAAAAAT+GGG - chr6.2:10686954-10686973 None:intergenic 30.0%
TTTGTAGCTTCTGTAAATCA+CGG - chr6.2:10687369-10687388 None:intergenic 30.0%
! AGTTCAGTAATACCTTTTGA+CGG + chr6.2:10688357-10688376 MS.gene018285:intron 30.0%
! TGTTATCTTTTGTATCTGTC+GGG - chr6.2:10688865-10688884 None:intergenic 30.0%
!! GCTTACCATAATTTGTGTTT+TGG + chr6.2:10687060-10687079 MS.gene018285:CDS 30.0%
!!! ATTTTGGGGATTTGTTAGAT+GGG + chr6.2:10687126-10687145 MS.gene018285:intron 30.0%
!!! TATTTTGGGGATTTGTTAGA+TGG + chr6.2:10687125-10687144 MS.gene018285:intron 30.0%
AAACATGGTATGGACAATAC+AGG - chr6.2:10688741-10688760 None:intergenic 35.0%
AACACAATGGCATTGTAAGA+TGG + chr6.2:10687612-10687631 MS.gene018285:intron 35.0%
AACATCAGAACAAGATTGCT+TGG + chr6.2:10686581-10686600 MS.gene018285:CDS 35.0%
AACCAGTTAGGATAAAAGAG+AGG - chr6.2:10688263-10688282 None:intergenic 35.0%
AATACAATACAGGAAGTTGG+AGG + chr6.2:10686751-10686770 MS.gene018285:intron 35.0%
AATCACGGTCAAAATTGCAT+TGG - chr6.2:10687354-10687373 None:intergenic 35.0%
AATCTTGTTCTGATGTTTGG+GGG - chr6.2:10686578-10686597 None:intergenic 35.0%
ACAAAATAGTACCATTTGGC+AGG - chr6.2:10686877-10686896 None:intergenic 35.0%
ACGAAAAGAGATGCAAAAAG+AGG - chr6.2:10688068-10688087 None:intergenic 35.0%
ACTCCAGTTATCTCAGATAA+AGG - chr6.2:10686787-10686806 None:intergenic 35.0%
AGCAATCTTGTTCTGATGTT+TGG - chr6.2:10686581-10686600 None:intergenic 35.0%
ATATTATTTCCGGGTCTGTT+CGG - chr6.2:10688706-10688725 None:intergenic 35.0%
ATCACGGTCAAAATTGCATT+GGG - chr6.2:10687353-10687372 None:intergenic 35.0%
ATGATTAGATGGAACCAGTT+AGG - chr6.2:10688275-10688294 None:intergenic 35.0%
ATTCATTTCCTCTCTTGTGA+TGG + chr6.2:10688446-10688465 MS.gene018285:intron 35.0%
ATTGATTGGAAACGACGTTA+TGG + chr6.2:10686829-10686848 MS.gene018285:CDS 35.0%
CAATCTTGTTCTGATGTTTG+GGG - chr6.2:10686579-10686598 None:intergenic 35.0%
CACAATACAATACAGGAAGT+TGG + chr6.2:10686748-10686767 MS.gene018285:intron 35.0%
CGAAAAGAGATGCAAAAAGA+GGG - chr6.2:10688067-10688086 None:intergenic 35.0%
CTGACCTAAATACTCAACAA+AGG + chr6.2:10687939-10687958 MS.gene018285:intron 35.0%
CTTTGTTGAGTATTTAGGTC+AGG - chr6.2:10687941-10687960 None:intergenic 35.0%
GAACACATGTTTGTGAAAAG+TGG + chr6.2:10687263-10687282 MS.gene018285:intron 35.0%
GCAATCTTGTTCTGATGTTT+GGG - chr6.2:10686580-10686599 None:intergenic 35.0%
GCTGTAAGATACTAAAACCA+AGG + chr6.2:10688219-10688238 MS.gene018285:intron 35.0%
GCTGTAAGGAACAAATTGAT+TGG + chr6.2:10686815-10686834 MS.gene018285:CDS 35.0%
TAATCTTCCAGGGAAGAATT+TGG - chr6.2:10688905-10688924 None:intergenic 35.0%
TACAGTATGCAAACATGGTA+TGG - chr6.2:10688751-10688770 None:intergenic 35.0%
TGAGAAAAAGATGCTTGAAG+AGG + chr6.2:10688024-10688043 MS.gene018285:CDS 35.0%
TGCATCAATTAACCGTCAAA+AGG - chr6.2:10688372-10688391 None:intergenic 35.0%
TGCCTTTGCCATATTATTTC+CGG - chr6.2:10688716-10688735 None:intergenic 35.0%
TGGAGGCTGAAAGAAAAAAA+GGG + chr6.2:10687494-10687513 MS.gene018285:intron 35.0%
TTCATTTCCTCTCTTGTGAT+GGG + chr6.2:10688447-10688466 MS.gene018285:intron 35.0%
TTGATCTTGATACCAGCATT+AGG - chr6.2:10686610-10686629 None:intergenic 35.0%
! AGACCTTTATCTGAGATAAC+TGG + chr6.2:10686781-10686800 MS.gene018285:CDS 35.0%
! AGTGCGTGAAAAGTGATTTT+GGG + chr6.2:10687544-10687563 MS.gene018285:intron 35.0%
! GTTATCTTTTGTATCTGTCG+GGG - chr6.2:10688864-10688883 None:intergenic 35.0%
! TGATGATGATGATGAAAGTG+AGG + chr6.2:10688988-10689007 MS.gene018285:CDS 35.0%
!! AATACTGGTATTTTTGCTGC+AGG + chr6.2:10688152-10688171 MS.gene018285:intron 35.0%
!! CTTTTTGGCATAATCTTCCA+GGG - chr6.2:10688915-10688934 None:intergenic 35.0%
!! GGAGTTTGTGAGTTTTGTAA+TGG + chr6.2:10687241-10687260 MS.gene018285:intron 35.0%
!! TCTTTTTGGCATAATCTTCC+AGG - chr6.2:10688916-10688935 None:intergenic 35.0%
!!! ATGGATTTTTAGTAGTGTGG+AGG + chr6.2:10687477-10687496 MS.gene018285:intron 35.0%
AAAGAGATGCAAAAAGAGGG+TGG - chr6.2:10688064-10688083 None:intergenic 40.0%
AAGAGATGCAAAAAGAGGGT+GGG - chr6.2:10688063-10688082 None:intergenic 40.0%
ACCCGGAAATAATATGGCAA+AGG + chr6.2:10688711-10688730 MS.gene018285:intron 40.0%
AGGGTACGAGTTCAATTAGT+CGG + chr6.2:10687220-10687239 MS.gene018285:intron 40.0%
AGGGTACGAGTTCAATTAGT+TGG + chr6.2:10687220-10687239 MS.gene018285:intron 40.0%
AGTATCTTACAGCACGCAAT+AGG - chr6.2:10688212-10688231 None:intergenic 40.0%
ATCTTGTTCTGATGTTTGGG+GGG - chr6.2:10686577-10686596 None:intergenic 40.0%
ATTGCTTGGAAACCTAATGC+TGG + chr6.2:10686595-10686614 MS.gene018285:CDS 40.0%
CCAAAAAGAATGGAGTTGTC+GGG + chr6.2:10688927-10688946 MS.gene018285:CDS 40.0%
CTGCAGAATTAGTGTACGTT+TGG + chr6.2:10687299-10687318 MS.gene018285:intron 40.0%
GAACAGACCCGGAAATAATA+TGG + chr6.2:10688705-10688724 MS.gene018285:intron 40.0%
GCCAAAAAGAATGGAGTTGT+CGG + chr6.2:10688926-10688945 MS.gene018285:CDS 40.0%
GCCTTTGCCATATTATTTCC+GGG - chr6.2:10688715-10688734 None:intergenic 40.0%
GTATCTTACAGCACGCAATA+GGG - chr6.2:10688211-10688230 None:intergenic 40.0%
GTGGAGGCTGAAAGAAAAAA+AGG + chr6.2:10687493-10687512 MS.gene018285:intron 40.0%
GTGTCAAACTCACATCTAAG+TGG - chr6.2:10687401-10687420 None:intergenic 40.0%
GTTGAGGTGGAAAGAAAACA+GGG + chr6.2:10687201-10687220 MS.gene018285:intron 40.0%
TGTTGAGGTGGAAAGAAAAC+AGG + chr6.2:10687200-10687219 MS.gene018285:intron 40.0%
TTCTTGGCATTCACTTCATC+AGG - chr6.2:10689088-10689107 None:intergenic 40.0%
! AGCCTCTCTTTTATCCTAAC+TGG + chr6.2:10688258-10688277 MS.gene018285:intron 40.0%
! CAATTTGTTCCTTACAGCGA+GGG - chr6.2:10686813-10686832 None:intergenic 40.0%
! GAGTGCGTGAAAAGTGATTT+TGG + chr6.2:10687543-10687562 MS.gene018285:intron 40.0%
! TCAATTTGTTCCTTACAGCG+AGG - chr6.2:10686814-10686833 None:intergenic 40.0%
! TGATGATGATGAAAGTGAGG+AGG + chr6.2:10688991-10689010 MS.gene018285:CDS 40.0%
!!! ATAGGCTGTTGTTTTCACGA+TGG - chr6.2:10687429-10687448 None:intergenic 40.0%
!!! GGGTTGTCCTTTTTGTTGTT+TGG + chr6.2:10686996-10687015 MS.gene018285:intron 40.0%
!!! TAGGCTGTTGTTTTCACGAT+GGG - chr6.2:10687428-10687447 None:intergenic 40.0%
!!! TTGGATTTTTGGGAGTGTTG+AGG + chr6.2:10687185-10687204 MS.gene018285:intron 40.0%
CATTTGGCAGGTTCATGAAG+AGG - chr6.2:10686865-10686884 None:intergenic 45.0%
CTCTTCATGAACCTGCCAAA+TGG + chr6.2:10686863-10686882 MS.gene018285:CDS 45.0%
TAGGGACGTTTCAGAAGTTG+AGG + chr6.2:10688000-10688019 MS.gene018285:intron 45.0%
TCTCTCGCTAGCGTTCTTAA+TGG - chr6.2:10688178-10688197 None:intergenic 45.0%
TGCAAAATGTTGTTGCCGTG+TGG + chr6.2:10687782-10687801 MS.gene018285:CDS 45.0%
TGTTTGTGTAGGTTGTGCGA+AGG + chr6.2:10687746-10687765 MS.gene018285:intron 45.0%
TTCCAACTATACGCTCCACA+CGG - chr6.2:10687800-10687819 None:intergenic 45.0%
! CCCGACAACTCCATTCTTTT+TGG - chr6.2:10688930-10688949 None:intergenic 45.0%
! TGATGCACACGCAACTCTTT+TGG + chr6.2:10688385-10688404 MS.gene018285:intron 45.0%
!!! GATTTTTGGGAGTGTTGAGG+TGG + chr6.2:10687188-10687207 MS.gene018285:intron 45.0%
!! ATTTAATATTAAAAGAAAAA+AGG - chr6.2:10686673-10686692 None:intergenic 5.0%
!! TTTAATATTAAAAGAAAAAA+GGG - chr6.2:10686672-10686691 None:intergenic 5.0%
ATGAGTCATCCGAACAGACC+CGG + chr6.2:10688694-10688713 MS.gene018285:intron 50.0%
CCTTAGTCCCATCACAAGAG+AGG - chr6.2:10688457-10688476 None:intergenic 50.0%
GTGTGGAGCGTATAGTTGGA+AGG + chr6.2:10687799-10687818 MS.gene018285:CDS 50.0%
! CCTCTCTTGTGATGGGACTA+AGG + chr6.2:10688454-10688473 MS.gene018285:intron 50.0%
! GATGGGACTAAGGTCCCTTT+TGG + chr6.2:10688464-10688483 MS.gene018285:intron 50.0%
!! ATGAGTGCCGGCAAGAAAAC+TGG + chr6.2:10686550-10686569 MS.gene018285:CDS 50.0%
TGCCGTGTGGAGCGTATAGT+TGG + chr6.2:10687795-10687814 MS.gene018285:CDS 55.0%
! TGCGAGTGAAGAGTGTGACG+AGG + chr6.2:10689045-10689064 MS.gene018285:CDS 55.0%
TGGAGTGTGCCCTCGCTGTA+AGG + chr6.2:10686801-10686820 MS.gene018285:CDS 60.0%
! GGGGGGACCAGTTTTCTTGC+CGG - chr6.2:10686560-10686579 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 10686550 10689114 10686550 ID=MS.gene018285
chr6.2 mRNA 10686550 10689114 10686550 ID=MS.gene018285.t1;Parent=MS.gene018285
chr6.2 exon 10686550 10686636 10686550 ID=MS.gene018285.t1.exon1;Parent=MS.gene018285.t1
chr6.2 CDS 10686550 10686636 10686550 ID=cds.MS.gene018285.t1;Parent=MS.gene018285.t1
chr6.2 exon 10686763 10686884 10686763 ID=MS.gene018285.t1.exon2;Parent=MS.gene018285.t1
chr6.2 CDS 10686763 10686884 10686763 ID=cds.MS.gene018285.t1;Parent=MS.gene018285.t1
chr6.2 exon 10687029 10687081 10687029 ID=MS.gene018285.t1.exon3;Parent=MS.gene018285.t1
chr6.2 CDS 10687029 10687081 10687029 ID=cds.MS.gene018285.t1;Parent=MS.gene018285.t1
chr6.2 exon 10687757 10687820 10687757 ID=MS.gene018285.t1.exon4;Parent=MS.gene018285.t1
chr6.2 CDS 10687757 10687820 10687757 ID=cds.MS.gene018285.t1;Parent=MS.gene018285.t1
chr6.2 exon 10688003 10688045 10688003 ID=MS.gene018285.t1.exon5;Parent=MS.gene018285.t1
chr6.2 CDS 10688003 10688045 10688003 ID=cds.MS.gene018285.t1;Parent=MS.gene018285.t1
chr6.2 exon 10688174 10688221 10688174 ID=MS.gene018285.t1.exon6;Parent=MS.gene018285.t1
chr6.2 CDS 10688174 10688221 10688174 ID=cds.MS.gene018285.t1;Parent=MS.gene018285.t1
chr6.2 exon 10688824 10689114 10688824 ID=MS.gene018285.t1.exon7;Parent=MS.gene018285.t1
chr6.2 CDS 10688824 10689114 10688824 ID=cds.MS.gene018285.t1;Parent=MS.gene018285.t1
Gene Sequence

>MS.gene018285

ATGAGTGCCGGCAAGAAAACTGGTCCCCCCAAACATCAGAACAAGATTGCTTGGAAACCTAATGCTGGTATCAAGATCAATGAAACTGTATGTATCTAACTTTTCTTCTTCCAAAATCACCCTTTTTTCTTTTAATATTAAATATAAAATTTTAATTATATACACATATATGTATATATAGATAGATATATGTAATCACACAATACAATACAGGAAGTTGGAGGAAGATTTAGACCTTTATCTGAGATAACTGGAGTGTGCCCTCGCTGTAAGGAACAAATTGATTGGAAACGACGTTATGGAAAATACAAGCCTCTTCATGAACCTGCCAAATGGTACTATTTTGTTTTTTTCCTTCTTTTTGTATATTTACATTAATAAAAATAATTTTTTGTTTTGTTCCCATTTTTTGGCATTTCGTTGATTGATTGATTAATTAGTTAACTGGGTTGTCCTTTTTGTTGTTTGGTTTGTTGCAGTCAAAGATGTTCAAAGCGTAATGTTCGCCAAGCTTACCATAATTTGTGTTTTGGTAAGTGTTATTATTTACACTTCATGTGTTTGATCTTTCTTTTTATTTTGGGGATTTGTTAGATGGGTATTTGCTAAATTATTAGTTGAATATGGGAAAAAAATTGGATTTTTGGGAGTGTTGAGGTGGAAAGAAAACAGGGTACGAGTTCAATTAGTTGGAGTTTGTGAGTTTTGTAATGGAACACATGTTTGTGAAAAGTGGTTTTACGAGATATCTGCAGAATTAGTGTACGTTTGGTTTAGCTTTTGCACAACTCAAATCGCTTCCCAATGCAATTTTGACCGTGATTTACAGAAGCTACAAATTGTAGCTTCCACTTAGATGTGAGTTTGACACTCAACCCATCGTGAAAACAACAGCCTATTAATATTAGTATGATATGGAAGGAAATAATGGATTTTTAGTAGTGTGGAGGCTGAAAGAAAAAAAGGGTACGAGTTCAATTAGTCGGAGCTTTTGAGTGCGTGAAAAGTGATTTTGGGAGATATATAAAAACAGTGAGTGTAAACGGATAGATTTGAACTAGTAACACAATGGCATTGTAAGATGGTGAAATATGATTGAACATTTAAGGTGTGAGTGAGTAGCCTAGATGAAATTAGTATAAAACTGAAAATGGGATTTCCTTTTTGATTATTTGTATTTTACTGATTGGTTTTTATGTTTGTGTAGGTTGTGCGAAGGAGCATCGTGTTTGTGCAAAATGTTGTTGCCGTGTGGAGCGTATAGTTGGAAGGTTGTTTTTCATATTTTATTTTTGATAATCCTTGTCTTTCACATTAAATGAAAGATTAACCAATTCAGTTTGTTTGTAACATTAAGTTTTATGCAAACTGAACGTTATTTAGCATTTCCTGACCTAAATACTCAACAAAGGAAAAGATGAATCTTGGTTGATATGAATTTTTCTTCTTGTAGGGACGTTTCAGAAGTTGAGGCTGAGAAAAAGATGCTTGAAGAGGTTTCTTTCTGTTTCCCACCCTCTTTTTGCATCTCTTTTCGTTGTATTTTTGGTACCCCTTTTGAATGTTAGACTTGTTCATCTGTTCATAGTAGAAACTCGAAATAATACTGGTATTTTTGCTGCAGGCCATTAAGAACGCTAGCGAGAGAGAAAGAAGATCCCTATTGCGTGCTGTAAGATACTAAAACCAAGGCTATTCATTTTTTTACAGCCTCTCTTTTATCCTAACTGGTTCCATCTAATCATGACATAATTTGAAATAAACCAAGACTATTAATTTGAATTTGTTAAACAATAACTATTTATGAAGTTCAGTAATACCTTTTGACGGTTAATTGATGCACACGCAACTCTTTTGGATAAACAAAGTCTATATTATGTTATTATGTTAGGCATGATTCATTTCCTCTCTTGTGATGGGACTAAGGTCCCTTTTGGATAAACAACTTAATGAAGCACATATAGCGTAAGTGCTTGTCGTATAAGTTATTTCTATAACGAAGATAAAATAAAGTCATTGTTTTCATAAGCTTTTTTGGCAAGCTTATGAAAATAAGCTGAATAGTTTGTAGACATGTTATAAGCCCTTTTTCGTAATCTTTTCCAAACAGTCTTATAAGTACTTATGCTAGTAGATAAGTTAAAATGAGTCATCCGAACAGACCCGGAAATAATATGGCAAAGGCATACCTGTATTGTCCATACCATGTTTGCATACTGTATTGTTCTGTAAACATGCATGCTTCTGATAATTTTTTTCTACTTTCACTATCAGATGAACAACAAAAACAAAGCTAAGAGTTCAACAGACACCCCGACAGATACAAAAGATAACAAAGTAGGAGAATTATTTCCAAATTCTTCCCTGGAAGATTATGCCAAAAAGAATGGAGTTGTCGGGAAACGTGATGATAGTAAAATTTGTGATAGCAAGCATCATGATGATGATGATGAAAGTGAGGAGGAAGTTTATGACGACGAAGATGATAATGACAGTGCGAGTGAAGAGTGTGACGAGGACAACAATGAGAACGTTCCTGATGAAGTGAATGCCAAGAATGAATGA
Protein sequence

>MS.gene018285.t1

MSAGKKTGPPKHQNKIAWKPNAGIKINETEVGGRFRPLSEITGVCPRCKEQIDWKRRYGKYKPLHEPAKCQRCSKRNVRQAYHNLCFGCAKEHRVCAKCCCRVERIVGRDVSEVEAEKKMLEEAIKNASERERRSLLRAMNNKNKAKSSTDTPTDTKDNKVGELFPNSSLEDYAKKNGVVGKRDDSKICDSKHHDDDDESEEEVYDDEDDNDSASEECDEDNNENVPDEVNAKNE