Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018525.t1 | XP_004493910.1 | 90.6 | 405 | 36 | 2 | 1 | 403 | 36 | 440 | 1.00E-185 | 659.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018525.t1 | F4JY11 | 72.2 | 403 | 112 | 0 | 1 | 403 | 38 | 440 | 1.8e-162 | 573.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018525.t1 | A0A1S2XSL9 | 90.6 | 405 | 36 | 2 | 1 | 403 | 36 | 440 | 7.5e-186 | 659.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25783 | MS.gene018525 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018525.t1 | MTR_7g100360 | 98.526 | 407 | 2 | 1 | 1 | 403 | 38 | 444 | 0.0 | 814 |
| MS.gene018525.t1 | MTR_1g067370 | 85.608 | 403 | 55 | 2 | 1 | 403 | 40 | 439 | 0.0 | 644 |
| MS.gene018525.t1 | MTR_3g080830 | 52.956 | 406 | 182 | 5 | 1 | 403 | 38 | 437 | 1.20e-146 | 423 |
| MS.gene018525.t1 | MTR_1g025450 | 58.667 | 150 | 60 | 1 | 1 | 150 | 315 | 462 | 1.14e-35 | 137 |
| MS.gene018525.t1 | MTR_1g061930 | 35.537 | 121 | 75 | 3 | 285 | 402 | 1 | 121 | 5.72e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018525.t1 | AT5G18520 | 80.397 | 403 | 79 | 0 | 1 | 403 | 38 | 440 | 0.0 | 672 |
| MS.gene018525.t1 | AT3G09570 | 77.419 | 403 | 91 | 0 | 1 | 403 | 37 | 439 | 0.0 | 632 |
| MS.gene018525.t1 | AT5G02630 | 64.706 | 391 | 131 | 3 | 1 | 389 | 36 | 421 | 0.0 | 513 |
| MS.gene018525.t1 | AT5G42090 | 52.346 | 405 | 189 | 3 | 1 | 403 | 37 | 439 | 8.63e-150 | 431 |
Find 87 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTAACTTTCTTTGTATTT+TGG | 0.133925 | 7.4:+9856900 | MS.gene018525:CDS |
| TCACCGCATTCATCTTCTTA+TGG | 0.284793 | 7.4:+9856955 | MS.gene018525:CDS |
| TGTGATTCCTCTGCAAGTTT+TGG | 0.286595 | 7.4:+9857195 | MS.gene018525:CDS |
| GTAACCCAATCTTTGATAAA+AGG | 0.306214 | 7.4:-9857253 | None:intergenic |
| GAAACCGAGACGGGAGGATT+CGG | 0.318301 | 7.4:-9856552 | None:intergenic |
| AAACCGAGACGGGAGGATTC+GGG | 0.347123 | 7.4:-9856551 | None:intergenic |
| GGAGATGGTGACGTGGCCTT+TGG | 0.356483 | 7.4:-9856486 | None:intergenic |
| GGATTCGGGTTGGGAGGAGG+AGG | 0.366479 | 7.4:-9856537 | None:intergenic |
| TTATCAAAGATTGGGTTACT+TGG | 0.371451 | 7.4:+9857257 | MS.gene018525:CDS |
| GGAGGATTCGGGTTGGGAGG+AGG | 0.372265 | 7.4:-9856540 | None:intergenic |
| GCGGTGAATAGAACGTTTAT+TGG | 0.391274 | 7.4:-9856939 | None:intergenic |
| AGATTGGGTTACTTGGAATC+AGG | 0.404748 | 7.4:+9857264 | MS.gene018525:CDS |
| AAGAAGAGACTGTATTCGTT+AGG | 0.422783 | 7.4:-9856737 | None:intergenic |
| GAGATGGTGACGTGGCCTTT+GGG | 0.424270 | 7.4:-9856485 | None:intergenic |
| TTGCTGCTTATAAGTATCAA+TGG | 0.424992 | 7.4:+9857488 | MS.gene018525:CDS |
| AAGCAGCTCAAATTGCTCTC+AGG | 0.433578 | 7.4:+9857623 | MS.gene018525:CDS |
| AATTTAGCTTCCGTTGTGAT+TGG | 0.437101 | 7.4:+9857220 | MS.gene018525:CDS |
| GAGACGGGAGGATTCGGGTT+GGG | 0.437820 | 7.4:-9856546 | None:intergenic |
| AAGCATTATGTTAAGGTCAC+TGG | 0.448272 | 7.4:+9857028 | MS.gene018525:CDS |
| GGAGGAGGAGAGAGGAGTGA+CGG | 0.449807 | 7.4:-9856522 | None:intergenic |
| AACATGGAAACAGAGGTTTC+AGG | 0.453845 | 7.4:-9856773 | None:intergenic |
| ACGGGAGGATTCGGGTTGGG+AGG | 0.462015 | 7.4:-9856543 | None:intergenic |
| TTCCGTTGTGATTGGTGAGA+CGG | 0.473034 | 7.4:+9857228 | MS.gene018525:CDS |
| AGAAGAGACTGTATTCGTTA+GGG | 0.475436 | 7.4:-9856736 | None:intergenic |
| TATTCGTTAGGGGTAGTGAC+GGG | 0.478207 | 7.4:-9856725 | None:intergenic |
| TTTGGTCTATTAGATCACTT+AGG | 0.480355 | 7.4:+9857338 | MS.gene018525:CDS |
| GTTGGATCTCGATGAGGACT+TGG | 0.482187 | 7.4:-9856601 | None:intergenic |
| TTGGTCTATTAGATCACTTA+GGG | 0.482990 | 7.4:+9857339 | MS.gene018525:CDS |
| GTTCTATATGTTTAGACCTG+TGG | 0.484013 | 7.4:+9857561 | MS.gene018525:CDS |
| AGAGGATAAGCATTATGTTA+AGG | 0.486485 | 7.4:+9857021 | MS.gene018525:CDS |
| TGCTGCTTATAAGTATCAAT+GGG | 0.491550 | 7.4:+9857489 | MS.gene018525:CDS |
| GGTTGGGAGGAGGAGGAGAG+AGG | 0.501579 | 7.4:-9856530 | None:intergenic |
| AATCTCGGTGCGAACGAACA+TGG | 0.502025 | 7.4:-9856789 | None:intergenic |
| TGTTCTTGATGAGGAGGAAG+AGG | 0.503016 | 7.4:+9857600 | MS.gene018525:CDS |
| TTAAGTAAGCAAGGAAGAAG+AGG | 0.505449 | 7.4:-9856883 | None:intergenic |
| TCCGTTGTGATTGGTGAGAC+GGG | 0.506473 | 7.4:+9857229 | MS.gene018525:CDS |
| AAGGAGGAGGAGAGAGGTCA+CGG | 0.512614 | 7.4:-9856679 | None:intergenic |
| AAGGTCACTGGTTTACCTCA+TGG | 0.517901 | 7.4:+9857040 | MS.gene018525:CDS |
| TTGAAGGAAGCGGAAGGAGG+AGG | 0.520743 | 7.4:-9856692 | None:intergenic |
| AGCAGCTCAAATTGCTCTCA+GGG | 0.524563 | 7.4:+9857624 | MS.gene018525:CDS |
| TCTCGATGAGGACTTGGATG+AGG | 0.525605 | 7.4:-9856595 | None:intergenic |
| GATCTAATAGACCAAACGAT+AGG | 0.528991 | 7.4:-9857331 | None:intergenic |
| CAAAGAAAGTTAAGTAAGCA+AGG | 0.529021 | 7.4:-9856892 | None:intergenic |
| ATCTAATAGACCAAACGATA+GGG | 0.534064 | 7.4:-9857330 | None:intergenic |
| CACTGGTTTACCTCATGGAT+GGG | 0.537772 | 7.4:+9857045 | MS.gene018525:CDS |
| TCTAAAGACTATCTCTCCGC+TGG | 0.539952 | 7.4:+9856833 | MS.gene018525:CDS |
| CTCGATGAGGACTTGGATGA+GGG | 0.546281 | 7.4:-9856594 | None:intergenic |
| TCACTGGTTTACCTCATGGA+TGG | 0.546620 | 7.4:+9857044 | MS.gene018525:CDS |
| GGATGAGGGTTTCTTCGTTG+AGG | 0.548877 | 7.4:-9856580 | None:intergenic |
| GACGGGGTAAGAGCGGTTGA+AGG | 0.557679 | 7.4:-9856708 | None:intergenic |
| TGAGTACTTTGTTCTTGATG+AGG | 0.557725 | 7.4:+9857591 | MS.gene018525:CDS |
| AAACAGATGGAAAAGCTTCG+AGG | 0.570433 | 7.4:+9857371 | MS.gene018525:CDS |
| GAGAGGAGTGACGGAGACAG+AGG | 0.573405 | 7.4:-9856513 | None:intergenic |
| CAACCCGAATCCTCCCGTCT+CGG | 0.573986 | 7.4:+9856548 | MS.gene018525:CDS |
| GGTCACGGAAAGTGAAGAGA+CGG | 0.574075 | 7.4:-9856664 | None:intergenic |
| GTAAGAGCGGTTGAAGGAAG+CGG | 0.576490 | 7.4:-9856702 | None:intergenic |
| GAATCGAGGACACAGAAGGA+AGG | 0.585251 | 7.4:-9856629 | None:intergenic |
| AGTGACGGAGACAGAGGAGA+CGG | 0.587327 | 7.4:-9856507 | None:intergenic |
| GTACTTTGTTCTTGATGAGG+AGG | 0.589383 | 7.4:+9857594 | MS.gene018525:CDS |
| AAGCGGAAGGAGGAGGAGAG+AGG | 0.590525 | 7.4:-9856685 | None:intergenic |
| CGGTTGAAGGAAGCGGAAGG+AGG | 0.591628 | 7.4:-9856695 | None:intergenic |
| AGGGAAACATCGAAAACAGA+TGG | 0.594318 | 7.4:+9857358 | MS.gene018525:CDS |
| TGAGGGTTTCTTCGTTGAGG+AGG | 0.595629 | 7.4:-9856577 | None:intergenic |
| GTCACGGAAAGTGAAGAGAC+GGG | 0.595959 | 7.4:-9856663 | None:intergenic |
| GTATTCGTTAGGGGTAGTGA+CGG | 0.596419 | 7.4:-9856726 | None:intergenic |
| CGAGACGGGAGGATTCGGGT+TGG | 0.598000 | 7.4:-9856547 | None:intergenic |
| TGCATCGAGATTGAAAATCT+CGG | 0.601809 | 7.4:-9856804 | None:intergenic |
| GAGGAGGAAGAAACCGAGAC+GGG | 0.604086 | 7.4:-9856561 | None:intergenic |
| GTGAGAATCGAGGACACAGA+AGG | 0.610226 | 7.4:-9856633 | None:intergenic |
| GAATCTTATCTGTGCTGCAG+AGG | 0.612979 | 7.4:+9857003 | MS.gene018525:CDS |
| AATCGAGGACACAGAAGGAA+GGG | 0.620605 | 7.4:-9856628 | None:intergenic |
| GGAGACAGAGGAGACGGAGA+TGG | 0.624066 | 7.4:-9856501 | None:intergenic |
| AAATTCGGTTTCACTCCCAA+AGG | 0.630515 | 7.4:+9856470 | MS.gene018525:CDS |
| AAATTAGCCAAAACTTGCAG+AGG | 0.630803 | 7.4:-9857202 | None:intergenic |
| GGGTAGTGACGGGGTAAGAG+CGG | 0.632558 | 7.4:-9856715 | None:intergenic |
| AGGGAGTTGAGTTTGTCCAG+CGG | 0.637182 | 7.4:-9856849 | None:intergenic |
| TGAGGAGGAAGAAACCGAGA+CGG | 0.644160 | 7.4:-9856562 | None:intergenic |
| GAGCGGTTGAAGGAAGCGGA+AGG | 0.646658 | 7.4:-9856698 | None:intergenic |
| ATTCGTTAGGGGTAGTGACG+GGG | 0.652907 | 7.4:-9856724 | None:intergenic |
| GAGGAAGAAACCGAGACGGG+AGG | 0.660795 | 7.4:-9856558 | None:intergenic |
| GAAGAGACTGTATTCGTTAG+GGG | 0.661935 | 7.4:-9856735 | None:intergenic |
| AGGAGACGGAGATGGTGACG+TGG | 0.672788 | 7.4:-9856493 | None:intergenic |
| GCGAACGAACATGGAAACAG+AGG | 0.693889 | 7.4:-9856780 | None:intergenic |
| GGGAAATGTAGTGAGAATCG+AGG | 0.694476 | 7.4:-9856643 | None:intergenic |
| ACCCGTCTCACCAATCACAA+CGG | 0.703906 | 7.4:-9857230 | None:intergenic |
| AACAATACATCCCATCCATG+AGG | 0.704032 | 7.4:-9857055 | None:intergenic |
| CAGCCATAAGAAGATGAATG+CGG | 0.717165 | 7.4:-9856958 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTATATTGTTGTTATT+GGG | + | chr7.4:9857422-9857441 | MS.gene018525:CDS | 15.0% |
| !!! | ACTTAACTTTCTTTGTATTT+TGG | + | chr7.4:9856900-9856919 | MS.gene018525:CDS | 20.0% |
| !!! | CAGTTTTATATTGTTGTTAT+TGG | + | chr7.4:9857421-9857440 | MS.gene018525:CDS | 20.0% |
| !!! | TTTACTGTTATTGTTTTGAT+CGG | + | chr7.4:9857112-9857131 | MS.gene018525:CDS | 20.0% |
| AGAGGATAAGCATTATGTTA+AGG | + | chr7.4:9857021-9857040 | MS.gene018525:CDS | 30.0% | |
| ATCTAATAGACCAAACGATA+GGG | - | chr7.4:9857333-9857352 | None:intergenic | 30.0% | |
| ATGATCCTCTTCGAAAAATT+CGG | + | chr7.4:9856455-9856474 | MS.gene018525:CDS | 30.0% | |
| CAAAGAAAGTTAAGTAAGCA+AGG | - | chr7.4:9856895-9856914 | None:intergenic | 30.0% | |
| GTAACCCAATCTTTGATAAA+AGG | - | chr7.4:9857256-9857275 | None:intergenic | 30.0% | |
| TTATCAAAGATTGGGTTACT+TGG | + | chr7.4:9857257-9857276 | MS.gene018525:CDS | 30.0% | |
| TTGGTCTATTAGATCACTTA+GGG | + | chr7.4:9857339-9857358 | MS.gene018525:CDS | 30.0% | |
| TTTGGTCTATTAGATCACTT+AGG | + | chr7.4:9857338-9857357 | MS.gene018525:CDS | 30.0% | |
| ! | CTATTATTTTCCCTATCGTT+TGG | + | chr7.4:9857320-9857339 | MS.gene018525:CDS | 30.0% |
| ! | TGCTGCTTATAAGTATCAAT+GGG | + | chr7.4:9857489-9857508 | MS.gene018525:CDS | 30.0% |
| ! | TTGCTGCTTATAAGTATCAA+TGG | + | chr7.4:9857488-9857507 | MS.gene018525:CDS | 30.0% |
| ! | TTTTCCCTATCTTGCAAAAA+CGG | - | chr7.4:9857160-9857179 | None:intergenic | 30.0% |
| AAATTAGCCAAAACTTGCAG+AGG | - | chr7.4:9857205-9857224 | None:intergenic | 35.0% | |
| AAGAAGAGACTGTATTCGTT+AGG | - | chr7.4:9856740-9856759 | None:intergenic | 35.0% | |
| AAGAAGAGGAAAAAGAGAGA+AGG | - | chr7.4:9856872-9856891 | None:intergenic | 35.0% | |
| AAGCATTATGTTAAGGTCAC+TGG | + | chr7.4:9857028-9857047 | MS.gene018525:CDS | 35.0% | |
| AGAAGAGACTGTATTCGTTA+GGG | - | chr7.4:9856739-9856758 | None:intergenic | 35.0% | |
| AGAAGAGGAAAAAGAGAGAA+GGG | - | chr7.4:9856871-9856890 | None:intergenic | 35.0% | |
| GATCTAATAGACCAAACGAT+AGG | - | chr7.4:9857334-9857353 | None:intergenic | 35.0% | |
| GTTCTATATGTTTAGACCTG+TGG | + | chr7.4:9857561-9857580 | MS.gene018525:CDS | 35.0% | |
| TGAGTACTTTGTTCTTGATG+AGG | + | chr7.4:9857591-9857610 | MS.gene018525:CDS | 35.0% | |
| TGCATCGAGATTGAAAATCT+CGG | - | chr7.4:9856807-9856826 | None:intergenic | 35.0% | |
| TTAAGTAAGCAAGGAAGAAG+AGG | - | chr7.4:9856886-9856905 | None:intergenic | 35.0% | |
| ! | AATTTAGCTTCCGTTGTGAT+TGG | + | chr7.4:9857220-9857239 | MS.gene018525:CDS | 35.0% |
| ! | ATTTTCAATCTCGATGCAGA+CGG | + | chr7.4:9856809-9856828 | MS.gene018525:CDS | 35.0% |
| ! | GGGTCCTTTTATCAAAGATT+GGG | + | chr7.4:9857249-9857268 | MS.gene018525:CDS | 35.0% |
| !! | AAGTACTCATTTTTCTCCAC+AGG | - | chr7.4:9857580-9857599 | None:intergenic | 35.0% |
| !! | GAAACCGTTTTTGCAAGATA+GGG | + | chr7.4:9857153-9857172 | MS.gene018525:CDS | 35.0% |
| !! | TGAAACCGAATTTTTCGAAG+AGG | - | chr7.4:9856463-9856482 | None:intergenic | 35.0% |
| !! | TGAAACCGTTTTTGCAAGAT+AGG | + | chr7.4:9857152-9857171 | MS.gene018525:CDS | 35.0% |
| !!! | GTTATTGTTTTGATCGGTAC+TGG | + | chr7.4:9857118-9857137 | MS.gene018525:CDS | 35.0% |
| AAACAGATGGAAAAGCTTCG+AGG | + | chr7.4:9857371-9857390 | MS.gene018525:CDS | 40.0% | |
| AAATTCGGTTTCACTCCCAA+AGG | + | chr7.4:9856470-9856489 | MS.gene018525:CDS | 40.0% | |
| AACAATACATCCCATCCATG+AGG | - | chr7.4:9857058-9857077 | None:intergenic | 40.0% | |
| AACATGGAAACAGAGGTTTC+AGG | - | chr7.4:9856776-9856795 | None:intergenic | 40.0% | |
| AGATTGGGTTACTTGGAATC+AGG | + | chr7.4:9857264-9857283 | MS.gene018525:CDS | 40.0% | |
| AGGGAAACATCGAAAACAGA+TGG | + | chr7.4:9857358-9857377 | MS.gene018525:CDS | 40.0% | |
| CAGCCATAAGAAGATGAATG+CGG | - | chr7.4:9856961-9856980 | None:intergenic | 40.0% | |
| GAAGAGACTGTATTCGTTAG+GGG | - | chr7.4:9856738-9856757 | None:intergenic | 40.0% | |
| GCGGTGAATAGAACGTTTAT+TGG | - | chr7.4:9856942-9856961 | None:intergenic | 40.0% | |
| GTACTTTGTTCTTGATGAGG+AGG | + | chr7.4:9857594-9857613 | MS.gene018525:CDS | 40.0% | |
| TCACCGCATTCATCTTCTTA+TGG | + | chr7.4:9856955-9856974 | MS.gene018525:CDS | 40.0% | |
| ! | CGGGTCCTTTTATCAAAGAT+TGG | + | chr7.4:9857248-9857267 | MS.gene018525:CDS | 40.0% |
| ! | TGTGATTCCTCTGCAAGTTT+TGG | + | chr7.4:9857195-9857214 | MS.gene018525:CDS | 40.0% |
| !! | GGCTGTTTTGCTTATCATGA+AGG | + | chr7.4:9856976-9856995 | MS.gene018525:CDS | 40.0% |
| !!! | TTGTTTTGATCGGTACTGGT+TGG | + | chr7.4:9857122-9857141 | MS.gene018525:CDS | 40.0% |
| AAGCAGCTCAAATTGCTCTC+AGG | + | chr7.4:9857623-9857642 | MS.gene018525:CDS | 45.0% | |
| AATCGAGGACACAGAAGGAA+GGG | - | chr7.4:9856631-9856650 | None:intergenic | 45.0% | |
| AGCAGCTCAAATTGCTCTCA+GGG | + | chr7.4:9857624-9857643 | MS.gene018525:CDS | 45.0% | |
| GAATCTTATCTGTGCTGCAG+AGG | + | chr7.4:9857003-9857022 | MS.gene018525:CDS | 45.0% | |
| GGGAAATGTAGTGAGAATCG+AGG | - | chr7.4:9856646-9856665 | None:intergenic | 45.0% | |
| GTATTCGTTAGGGGTAGTGA+CGG | - | chr7.4:9856729-9856748 | None:intergenic | 45.0% | |
| TATTCGTTAGGGGTAGTGAC+GGG | - | chr7.4:9856728-9856747 | None:intergenic | 45.0% | |
| TCTAAAGACTATCTCTCCGC+TGG | + | chr7.4:9856833-9856852 | MS.gene018525:CDS | 45.0% | |
| TGTTCTTGATGAGGAGGAAG+AGG | + | chr7.4:9857600-9857619 | MS.gene018525:CDS | 45.0% | |
| TTCCGTTGTGATTGGTGAGA+CGG | + | chr7.4:9857228-9857247 | MS.gene018525:CDS | 45.0% | |
| !! | AAGGTCACTGGTTTACCTCA+TGG | + | chr7.4:9857040-9857059 | MS.gene018525:CDS | 45.0% |
| !! | CACAGAAGGAAGGGTTTTGT+TGG | - | chr7.4:9856622-9856641 | None:intergenic | 45.0% |
| !! | CACTGGTTTACCTCATGGAT+GGG | + | chr7.4:9857045-9857064 | MS.gene018525:CDS | 45.0% |
| !! | TCACTGGTTTACCTCATGGA+TGG | + | chr7.4:9857044-9857063 | MS.gene018525:CDS | 45.0% |
| !!! | GGTTTTGTTGGATCTCGATG+AGG | - | chr7.4:9856610-9856629 | None:intergenic | 45.0% |
| ACCCGTCTCACCAATCACAA+CGG | - | chr7.4:9857233-9857252 | None:intergenic | 50.0% | |
| AGGGAGTTGAGTTTGTCCAG+CGG | - | chr7.4:9856852-9856871 | None:intergenic | 50.0% | |
| ATTCGTTAGGGGTAGTGACG+GGG | - | chr7.4:9856727-9856746 | None:intergenic | 50.0% | |
| CTCGATGAGGACTTGGATGA+GGG | - | chr7.4:9856597-9856616 | None:intergenic | 50.0% | |
| GAATCGAGGACACAGAAGGA+AGG | - | chr7.4:9856632-9856651 | None:intergenic | 50.0% | |
| GCGAACGAACATGGAAACAG+AGG | - | chr7.4:9856783-9856802 | None:intergenic | 50.0% | |
| GGATGAGGGTTTCTTCGTTG+AGG | - | chr7.4:9856583-9856602 | None:intergenic | 50.0% | |
| GGTCACGGAAAGTGAAGAGA+CGG | - | chr7.4:9856667-9856686 | None:intergenic | 50.0% | |
| GTAAGAGCGGTTGAAGGAAG+CGG | - | chr7.4:9856705-9856724 | None:intergenic | 50.0% | |
| GTCACGGAAAGTGAAGAGAC+GGG | - | chr7.4:9856666-9856685 | None:intergenic | 50.0% | |
| GTGAGAATCGAGGACACAGA+AGG | - | chr7.4:9856636-9856655 | None:intergenic | 50.0% | |
| GTTGGATCTCGATGAGGACT+TGG | - | chr7.4:9856604-9856623 | None:intergenic | 50.0% | |
| TCCGTTGTGATTGGTGAGAC+GGG | + | chr7.4:9857229-9857248 | MS.gene018525:CDS | 50.0% | |
| TCTCGATGAGGACTTGGATG+AGG | - | chr7.4:9856598-9856617 | None:intergenic | 50.0% | |
| TGAGGAGGAAGAAACCGAGA+CGG | - | chr7.4:9856565-9856584 | None:intergenic | 50.0% | |
| TGAGGGTTTCTTCGTTGAGG+AGG | - | chr7.4:9856580-9856599 | None:intergenic | 50.0% | |
| ! | AATCTCGGTGCGAACGAACA+TGG | - | chr7.4:9856792-9856811 | None:intergenic | 50.0% |
| AAACCGAGACGGGAGGATTC+GGG | - | chr7.4:9856554-9856573 | None:intergenic | 55.0% | |
| AAGGAGGAGGAGAGAGGTCA+CGG | - | chr7.4:9856682-9856701 | None:intergenic | 55.0% | |
| GAAACCGAGACGGGAGGATT+CGG | - | chr7.4:9856555-9856574 | None:intergenic | 55.0% | |
| GAGGAGGAAGAAACCGAGAC+GGG | - | chr7.4:9856564-9856583 | None:intergenic | 55.0% | |
| TTGAAGGAAGCGGAAGGAGG+AGG | - | chr7.4:9856695-9856714 | None:intergenic | 55.0% | |
| ! | AGTGACGGAGACAGAGGAGA+CGG | - | chr7.4:9856510-9856529 | None:intergenic | 55.0% |
| ! | GAGATGGTGACGTGGCCTTT+GGG | - | chr7.4:9856488-9856507 | None:intergenic | 55.0% |
| AAGCGGAAGGAGGAGGAGAG+AGG | - | chr7.4:9856688-9856707 | None:intergenic | 60.0% | |
| CAACCCGAATCCTCCCGTCT+CGG | + | chr7.4:9856548-9856567 | MS.gene018525:CDS | 60.0% | |
| CGGTTGAAGGAAGCGGAAGG+AGG | - | chr7.4:9856698-9856717 | None:intergenic | 60.0% | |
| GACGGGGTAAGAGCGGTTGA+AGG | - | chr7.4:9856711-9856730 | None:intergenic | 60.0% | |
| GAGCGGTTGAAGGAAGCGGA+AGG | - | chr7.4:9856701-9856720 | None:intergenic | 60.0% | |
| GAGGAAGAAACCGAGACGGG+AGG | - | chr7.4:9856561-9856580 | None:intergenic | 60.0% | |
| GGAGACAGAGGAGACGGAGA+TGG | - | chr7.4:9856504-9856523 | None:intergenic | 60.0% | |
| GGAGGAGGAGAGAGGAGTGA+CGG | - | chr7.4:9856525-9856544 | None:intergenic | 60.0% | |
| ! | AGGAGACGGAGATGGTGACG+TGG | - | chr7.4:9856496-9856515 | None:intergenic | 60.0% |
| ! | GAGACGGGAGGATTCGGGTT+GGG | - | chr7.4:9856549-9856568 | None:intergenic | 60.0% |
| ! | GAGAGGAGTGACGGAGACAG+AGG | - | chr7.4:9856516-9856535 | None:intergenic | 60.0% |
| ! | GGAGATGGTGACGTGGCCTT+TGG | - | chr7.4:9856489-9856508 | None:intergenic | 60.0% |
| ! | GGGTAGTGACGGGGTAAGAG+CGG | - | chr7.4:9856718-9856737 | None:intergenic | 60.0% |
| CGAGACGGGAGGATTCGGGT+TGG | - | chr7.4:9856550-9856569 | None:intergenic | 65.0% | |
| GGTTGGGAGGAGGAGGAGAG+AGG | - | chr7.4:9856533-9856552 | None:intergenic | 65.0% | |
| !! | ACGGGAGGATTCGGGTTGGG+AGG | - | chr7.4:9856546-9856565 | None:intergenic | 65.0% |
| !! | GGAGGATTCGGGTTGGGAGG+AGG | - | chr7.4:9856543-9856562 | None:intergenic | 65.0% |
| !! | GGATTCGGGTTGGGAGGAGG+AGG | - | chr7.4:9856540-9856559 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 9856455 | 9857666 | 9856455 | ID=MS.gene018525 |
| chr7.4 | mRNA | 9856455 | 9857666 | 9856455 | ID=MS.gene018525.t1;Parent=MS.gene018525 |
| chr7.4 | exon | 9856455 | 9857666 | 9856455 | ID=MS.gene018525.t1.exon1;Parent=MS.gene018525.t1 |
| chr7.4 | CDS | 9856455 | 9857666 | 9856455 | ID=cds.MS.gene018525.t1;Parent=MS.gene018525.t1 |
| Gene Sequence |
| Protein sequence |
