Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25783.t1 | XP_013461113.1 | 98.4 | 437 | 5 | 1 | 1 | 435 | 1 | 437 | 9.00E-236 | 825.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25783.t1 | F4JY11 | 49.7 | 443 | 212 | 6 | 1 | 435 | 1 | 440 | 2.9e-110 | 400.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25783.t1 | A0A072V004 | 98.4 | 437 | 5 | 1 | 1 | 435 | 1 | 437 | 6.5e-236 | 825.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051940 | MS.gene25783 | 0.816876 | 4.41E-52 | -1.69E-46 |
| MS.gene057020 | MS.gene25783 | 0.801643 | 8.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09816 | MS.gene25783 | PPI |
| MS.gene25783 | MS.gene30875 | PPI |
| MS.gene25783 | MS.gene029898 | PPI |
| MS.gene25783 | MS.gene073814 | PPI |
| MS.gene25783 | MS.gene22488 | PPI |
| MS.gene25783 | MS.gene000171 | PPI |
| MS.gene25783 | MS.gene061926 | PPI |
| MS.gene25783 | MS.gene018525 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25783.t1 | MTR_3g080830 | 98.398 | 437 | 5 | 1 | 1 | 435 | 1 | 437 | 0.0 | 880 |
| MS.gene25783.t1 | MTR_1g067370 | 53.350 | 403 | 181 | 4 | 18 | 416 | 22 | 421 | 5.70e-145 | 421 |
| MS.gene25783.t1 | MTR_7g100360 | 51.467 | 443 | 196 | 7 | 8 | 435 | 6 | 444 | 1.74e-139 | 407 |
| MS.gene25783.t1 | MTR_1g061930 | 31.405 | 121 | 81 | 2 | 316 | 434 | 1 | 121 | 6.46e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25783.t1 | AT5G42090 | 80.815 | 417 | 75 | 3 | 23 | 435 | 24 | 439 | 0.0 | 682 |
| MS.gene25783.t1 | AT5G18520 | 49.887 | 443 | 211 | 6 | 1 | 435 | 1 | 440 | 1.99e-151 | 437 |
| MS.gene25783.t1 | AT3G09570 | 51.861 | 403 | 186 | 4 | 20 | 416 | 21 | 421 | 8.60e-144 | 417 |
| MS.gene25783.t1 | AT5G02630 | 44.552 | 413 | 224 | 3 | 10 | 420 | 12 | 421 | 5.58e-118 | 351 |
Find 93 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTGCACTCTCGATTCA+TGG | 0.231577 | 3.2:-70776548 | MS.gene25783:CDS |
| GGAGGAGAGGGAGGAGGAGG+TGG | 0.237825 | 3.2:+70776751 | None:intergenic |
| TCATCATCAATGACAAAATA+AGG | 0.263487 | 3.2:+70775532 | None:intergenic |
| ACTTGCTTTCTATGTGTTTA+CGG | 0.280331 | 3.2:-70775584 | MS.gene25783:CDS |
| GGAGTTAGAGAGTGAGATTT+TGG | 0.285068 | 3.2:+70776599 | None:intergenic |
| GGAGGAGGAGAGGGAGGAGG+AGG | 0.286130 | 3.2:+70776748 | None:intergenic |
| TCAACAGCTTAAGGTTTCTA+TGG | 0.288614 | 3.2:-70776355 | MS.gene25783:CDS |
| TTACTTCATATCGGTATTCT+TGG | 0.293491 | 3.2:-70775636 | MS.gene25783:CDS |
| CTTGCTTTCTATGTGTTTAC+GGG | 0.314684 | 3.2:-70775583 | MS.gene25783:CDS |
| TTGTCATCCTCAACAGCTTA+AGG | 0.322321 | 3.2:-70776364 | MS.gene25783:CDS |
| TGATGAAGTTGACTTTGTTC+AGG | 0.368063 | 3.2:-70775726 | MS.gene25783:CDS |
| TGGTTGGGAGGGTGGTGAAG+AGG | 0.393051 | 3.2:+70776727 | None:intergenic |
| GACTTTGGAGAGATCGAGAT+TGG | 0.395262 | 3.2:+70776578 | None:intergenic |
| TTGGGAGGGTGGTGAAGAGG+AGG | 0.398005 | 3.2:+70776730 | None:intergenic |
| TGGTGAAGAGGAGGAGGAGA+GGG | 0.400177 | 3.2:+70776739 | None:intergenic |
| ATTGATGAGAGTGGACCTTA+TGG | 0.404564 | 3.2:-70775886 | MS.gene25783:CDS |
| AGAGGAGGAGGAGAGGGAGG+AGG | 0.405949 | 3.2:+70776745 | None:intergenic |
| ATCATCCCTTTCGATCAATT+CGG | 0.414835 | 3.2:-70776657 | MS.gene25783:CDS |
| GTGGACCTTATGGACATGAT+TGG | 0.415869 | 3.2:-70775876 | MS.gene25783:CDS |
| TTTACGCTGATTGTGTTGAT+TGG | 0.417089 | 3.2:-70776012 | MS.gene25783:CDS |
| GGAGGGTGGTGAAGAGGAGG+AGG | 0.420486 | 3.2:+70776733 | None:intergenic |
| ACTTCCAGTACGCTTAATAT+AGG | 0.429692 | 3.2:+70776092 | None:intergenic |
| CGTGAGGCTGCGAGGACTGA+TGG | 0.430720 | 3.2:-70775766 | MS.gene25783:CDS |
| CATTTACTTCACTAGGGTTG+TGG | 0.433522 | 3.2:-70775677 | MS.gene25783:CDS |
| CTGATTGTGTTGATTGGTAC+TGG | 0.437058 | 3.2:-70776006 | MS.gene25783:CDS |
| GTGGTGAAGAGGAGGAGGAG+AGG | 0.438570 | 3.2:+70776738 | None:intergenic |
| GTTCGTGATTATCTTTCTGC+TGG | 0.441669 | 3.2:-70776291 | MS.gene25783:CDS |
| TGGAGACTATTACTTCATAT+CGG | 0.451627 | 3.2:-70775645 | MS.gene25783:CDS |
| TGAAGAGGAGGAGGAGAGGG+AGG | 0.455304 | 3.2:+70776742 | None:intergenic |
| ACGATCGTCGTTGCGGATCT+CGG | 0.456647 | 3.2:+70776683 | None:intergenic |
| TTCATTGTAAAGAGTATTGA+AGG | 0.458963 | 3.2:+70776422 | None:intergenic |
| TCTTCAGGATAAAGAAAAGA+AGG | 0.468192 | 3.2:-70775962 | MS.gene25783:CDS |
| AAGTCCTATATTAAGCGTAC+TGG | 0.469060 | 3.2:-70776096 | MS.gene25783:CDS |
| TTCTTAATCGACCACACAAT+CGG | 0.471813 | 3.2:+70775793 | None:intergenic |
| GAATTGATCGAAAGGGATGA+TGG | 0.480328 | 3.2:+70776659 | None:intergenic |
| GATTGTTGCAAATATTGCTC+AGG | 0.485092 | 3.2:-70775914 | MS.gene25783:CDS |
| TGGACCTTATGGACATGATT+GGG | 0.487255 | 3.2:-70775875 | MS.gene25783:CDS |
| AACAAACAACATCAACAAGC+AGG | 0.489203 | 3.2:+70775833 | None:intergenic |
| CGGATCTCGGAGAAGGTGGT+TGG | 0.493239 | 3.2:+70776711 | None:intergenic |
| GGATCTCGGAGAAGGTGGTT+GGG | 0.493347 | 3.2:+70776712 | None:intergenic |
| AAATAAGGATTATGCGCCTC+TGG | 0.493934 | 3.2:+70775547 | None:intergenic |
| GAGAGAAGAGAAAGTGAAAA+CGG | 0.494866 | 3.2:+70776458 | None:intergenic |
| TAGGGTTGTGGTTTATGCGT+TGG | 0.498351 | 3.2:-70775665 | MS.gene25783:CDS |
| TACTGGAAGTGCTCATGGAT+GGG | 0.508854 | 3.2:-70776079 | MS.gene25783:CDS |
| GAGATTATACTGATCAGAAT+CGG | 0.509357 | 3.2:+70776398 | None:intergenic |
| TTCACTTTCTCTTCTCTCAA+CGG | 0.511366 | 3.2:-70776453 | MS.gene25783:CDS |
| ATGGACATGATTGGGTTACA+TGG | 0.512683 | 3.2:-70775867 | MS.gene25783:CDS |
| TAGTGTGGTTGCTGCTGAGT+TGG | 0.513456 | 3.2:-70775611 | MS.gene25783:CDS |
| CTCGGAGAAGGTGGTTGGGA+GGG | 0.521613 | 3.2:+70776716 | None:intergenic |
| AAGCGTACTGGAAGTGCTCA+TGG | 0.526195 | 3.2:-70776084 | MS.gene25783:CDS |
| GGAGAAACGGATCTCGGAGA+AGG | 0.526322 | 3.2:+70776704 | None:intergenic |
| GCAGAGGAAGAAACCGACTT+TGG | 0.529855 | 3.2:+70776563 | None:intergenic |
| GTAACCCAATCATGTCCATA+AGG | 0.532920 | 3.2:+70775871 | None:intergenic |
| CTGGTAGAACAATTCTACCT+AGG | 0.534285 | 3.2:-70776272 | MS.gene25783:CDS |
| GTGAGGCTGCGAGGACTGAT+GGG | 0.534313 | 3.2:-70775765 | MS.gene25783:CDS |
| GGAGAAGGTGGTTGGGAGGG+TGG | 0.536992 | 3.2:+70776719 | None:intergenic |
| TCCGCTATGTATAATCTCGA+TGG | 0.547866 | 3.2:-70776324 | MS.gene25783:CDS |
| TGGTAGAACAATTCTACCTA+GGG | 0.553077 | 3.2:-70776271 | MS.gene25783:CDS |
| ATAGAAACCTTAAGCTGTTG+AGG | 0.553084 | 3.2:+70776357 | None:intergenic |
| CGTTGCGGATCTCGGAGAAA+CGG | 0.563941 | 3.2:+70776691 | None:intergenic |
| GTACTGGAAGTGCTCATGGA+TGG | 0.567621 | 3.2:-70776080 | MS.gene25783:CDS |
| CATTGATGATGAAGAGGAAG+AGG | 0.568453 | 3.2:-70775521 | MS.gene25783:CDS |
| GAGAAGACAAAATAAACCCT+AGG | 0.570840 | 3.2:+70776255 | None:intergenic |
| GAAACGGATCTCGGAGAAGG+TGG | 0.577395 | 3.2:+70776707 | None:intergenic |
| GATCTCGGAGAAACGGATCT+CGG | 0.582844 | 3.2:+70776698 | None:intergenic |
| AGAGGAAGAGGCTGCTGCTG+AGG | 0.584614 | 3.2:-70775509 | MS.gene25783:CDS |
| AATTGATCGAAAGGGATGAT+GGG | 0.586295 | 3.2:+70776660 | None:intergenic |
| CTGTGTTGTTTCCGATTGTG+TGG | 0.588570 | 3.2:-70775804 | MS.gene25783:CDS |
| TGCGAGGACTGATGGGAAAG+CGG | 0.590490 | 3.2:-70775758 | MS.gene25783:CDS |
| CAGGTTGTTATTGATGAGAG+TGG | 0.592471 | 3.2:-70775895 | MS.gene25783:CDS |
| TCTCGGAGAAGGTGGTTGGG+AGG | 0.597605 | 3.2:+70776715 | None:intergenic |
| GAAAACGGATTTAACGAGAT+CGG | 0.600567 | 3.2:+70776473 | None:intergenic |
| CACTAATCCAAACCGCAGCA+AGG | 0.601027 | 3.2:+70776217 | None:intergenic |
| TCGGTATTCTTGGACTAGTG+TGG | 0.601627 | 3.2:-70775626 | MS.gene25783:CDS |
| GTGAATCCGAATTGATCGAA+AGG | 0.604583 | 3.2:+70776651 | None:intergenic |
| GTTCTTCAACAACTCGAAGA+CGG | 0.611358 | 3.2:-70776519 | MS.gene25783:CDS |
| ACTAATCCAAACCGCAGCAA+GGG | 0.616565 | 3.2:+70776218 | None:intergenic |
| ATATTTGCAACAATCTGAAG+CGG | 0.621233 | 3.2:+70775922 | None:intergenic |
| AATCTCGATCTCTCCAAAGT+CGG | 0.624176 | 3.2:-70776576 | MS.gene25783:CDS |
| TTGTGTTGATTGGTACTGGA+TGG | 0.632669 | 3.2:-70776002 | MS.gene25783:CDS |
| TGAATCCGAATTGATCGAAA+GGG | 0.633966 | 3.2:+70776652 | None:intergenic |
| TGATGGGACGATCGTCGTTG+CGG | 0.641503 | 3.2:+70776676 | None:intergenic |
| TTGCTTTCTATGTGTTTACG+GGG | 0.649549 | 3.2:-70775582 | MS.gene25783:CDS |
| AGAATCTTCGTGAGGCTGCG+AGG | 0.650433 | 3.2:-70775774 | MS.gene25783:CDS |
| GTCGATTAAGAATCTTCGTG+AGG | 0.674611 | 3.2:-70775782 | MS.gene25783:CDS |
| TCCATCGAGATTATACATAG+CGG | 0.678450 | 3.2:+70776323 | None:intergenic |
| GCCATGAATCGAGAGTGCAG+AGG | 0.679604 | 3.2:+70776547 | None:intergenic |
| GATTAATCTGTTGTGTGAGG+CGG | 0.680404 | 3.2:-70776124 | MS.gene25783:CDS |
| GAGGACTGATGGGAAAGCGG+CGG | 0.686181 | 3.2:-70775755 | MS.gene25783:CDS |
| GGGGTATAAGTTCAAGCCAG+AGG | 0.697235 | 3.2:-70775563 | MS.gene25783:CDS |
| AGCGATTAATCTGTTGTGTG+AGG | 0.718620 | 3.2:-70776127 | MS.gene25783:CDS |
| CAATTCGGATTCACACACAA+CGG | 0.742969 | 3.2:-70776642 | MS.gene25783:CDS |
| GAAATAATGAATTCGAAACG+CGG | 0.762807 | 3.2:+70776173 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATGTTTAGTTTTCTGAAA+GGG | - | chr3.2:70776195-70776214 | MS.gene25783:CDS | 20.0% |
| !!! | TATATGTTTAGTTTTCTGAA+AGG | - | chr3.2:70776194-70776213 | MS.gene25783:CDS | 20.0% |
| ! | TCATCATCAATGACAAAATA+AGG | + | chr3.2:70776710-70776729 | None:intergenic | 25.0% |
| !! | CTTTTACATTTACTTCACTA+GGG | - | chr3.2:70776556-70776575 | MS.gene25783:CDS | 25.0% |
| !! | TCTTTTACATTTACTTCACT+AGG | - | chr3.2:70776555-70776574 | MS.gene25783:CDS | 25.0% |
| !! | TTTTCTTTATCCTGAAGAAA+CGG | + | chr3.2:70776275-70776294 | None:intergenic | 25.0% |
| !!! | TTCATTGTAAAGAGTATTGA+AGG | + | chr3.2:70775820-70775839 | None:intergenic | 25.0% |
| ACTTGCTTTCTATGTGTTTA+CGG | - | chr3.2:70776655-70776674 | MS.gene25783:CDS | 30.0% | |
| ATATTTGCAACAATCTGAAG+CGG | + | chr3.2:70776320-70776339 | None:intergenic | 30.0% | |
| GAAATAATGAATTCGAAACG+CGG | + | chr3.2:70776069-70776088 | None:intergenic | 30.0% | |
| GAGATTATACTGATCAGAAT+CGG | + | chr3.2:70775844-70775863 | None:intergenic | 30.0% | |
| TCTTCAGGATAAAGAAAAGA+AGG | - | chr3.2:70776277-70776296 | MS.gene25783:CDS | 30.0% | |
| TGGAGACTATTACTTCATAT+CGG | - | chr3.2:70776594-70776613 | MS.gene25783:CDS | 30.0% | |
| TTACTTCATATCGGTATTCT+TGG | - | chr3.2:70776603-70776622 | MS.gene25783:CDS | 30.0% | |
| !!! | GGTTTATTTTGTCTTCTCTT+TGG | - | chr3.2:70775989-70776008 | MS.gene25783:CDS | 30.0% |
| !!! | TTTTGTCATTGATGATGAAG+AGG | - | chr3.2:70776712-70776731 | MS.gene25783:CDS | 30.0% |
| AACAAACAACATCAACAAGC+AGG | + | chr3.2:70776409-70776428 | None:intergenic | 35.0% | |
| AAGTCCTATATTAAGCGTAC+TGG | - | chr3.2:70776143-70776162 | MS.gene25783:CDS | 35.0% | |
| AATTGATCGAAAGGGATGAT+GGG | + | chr3.2:70775582-70775601 | None:intergenic | 35.0% | |
| ACTTCCAGTACGCTTAATAT+AGG | + | chr3.2:70776150-70776169 | None:intergenic | 35.0% | |
| ATAGAAACCTTAAGCTGTTG+AGG | + | chr3.2:70775885-70775904 | None:intergenic | 35.0% | |
| ATCATCCCTTTCGATCAATT+CGG | - | chr3.2:70775582-70775601 | MS.gene25783:CDS | 35.0% | |
| CTTGCTTTCTATGTGTTTAC+GGG | - | chr3.2:70776656-70776675 | MS.gene25783:CDS | 35.0% | |
| GAGAAGACAAAATAAACCCT+AGG | + | chr3.2:70775987-70776006 | None:intergenic | 35.0% | |
| GAGAGAAGAGAAAGTGAAAA+CGG | + | chr3.2:70775784-70775803 | None:intergenic | 35.0% | |
| GATTGTTGCAAATATTGCTC+AGG | - | chr3.2:70776325-70776344 | MS.gene25783:CDS | 35.0% | |
| TCAACAGCTTAAGGTTTCTA+TGG | - | chr3.2:70775884-70775903 | MS.gene25783:CDS | 35.0% | |
| TCCATCGAGATTATACATAG+CGG | + | chr3.2:70775919-70775938 | None:intergenic | 35.0% | |
| TGAATCCGAATTGATCGAAA+GGG | + | chr3.2:70775590-70775609 | None:intergenic | 35.0% | |
| TGGTAGAACAATTCTACCTA+GGG | - | chr3.2:70775968-70775987 | MS.gene25783:CDS | 35.0% | |
| TTCACTTTCTCTTCTCTCAA+CGG | - | chr3.2:70775786-70775805 | MS.gene25783:CDS | 35.0% | |
| TTCTTAATCGACCACACAAT+CGG | + | chr3.2:70776449-70776468 | None:intergenic | 35.0% | |
| TTGCTTTCTATGTGTTTACG+GGG | - | chr3.2:70776657-70776676 | MS.gene25783:CDS | 35.0% | |
| ! | GAAAACGGATTTAACGAGAT+CGG | + | chr3.2:70775769-70775788 | None:intergenic | 35.0% |
| ! | TGATGAAGTTGACTTTGTTC+AGG | - | chr3.2:70776513-70776532 | MS.gene25783:CDS | 35.0% |
| ! | TTTACGCTGATTGTGTTGAT+TGG | - | chr3.2:70776227-70776246 | MS.gene25783:CDS | 35.0% |
| AAATAAGGATTATGCGCCTC+TGG | + | chr3.2:70776695-70776714 | None:intergenic | 40.0% | |
| AATCTCGATCTCTCCAAAGT+CGG | - | chr3.2:70775663-70775682 | MS.gene25783:CDS | 40.0% | |
| AGCGATTAATCTGTTGTGTG+AGG | - | chr3.2:70776112-70776131 | MS.gene25783:CDS | 40.0% | |
| ATGGACATGATTGGGTTACA+TGG | - | chr3.2:70776372-70776391 | MS.gene25783:CDS | 40.0% | |
| ATTGATGAGAGTGGACCTTA+TGG | - | chr3.2:70776353-70776372 | MS.gene25783:CDS | 40.0% | |
| CAATTCGGATTCACACACAA+CGG | - | chr3.2:70775597-70775616 | MS.gene25783:CDS | 40.0% | |
| CATTTACTTCACTAGGGTTG+TGG | - | chr3.2:70776562-70776581 | MS.gene25783:CDS | 40.0% | |
| CTGGTAGAACAATTCTACCT+AGG | - | chr3.2:70775967-70775986 | MS.gene25783:CDS | 40.0% | |
| GAATTGATCGAAAGGGATGA+TGG | + | chr3.2:70775583-70775602 | None:intergenic | 40.0% | |
| GATTAATCTGTTGTGTGAGG+CGG | - | chr3.2:70776115-70776134 | MS.gene25783:CDS | 40.0% | |
| GTAACCCAATCATGTCCATA+AGG | + | chr3.2:70776371-70776390 | None:intergenic | 40.0% | |
| GTCGATTAAGAATCTTCGTG+AGG | - | chr3.2:70776457-70776476 | MS.gene25783:CDS | 40.0% | |
| GTGAATCCGAATTGATCGAA+AGG | + | chr3.2:70775591-70775610 | None:intergenic | 40.0% | |
| GTTCGTGATTATCTTTCTGC+TGG | - | chr3.2:70775948-70775967 | MS.gene25783:CDS | 40.0% | |
| GTTCTTCAACAACTCGAAGA+CGG | - | chr3.2:70775720-70775739 | MS.gene25783:CDS | 40.0% | |
| TCCGCTATGTATAATCTCGA+TGG | - | chr3.2:70775915-70775934 | MS.gene25783:CDS | 40.0% | |
| TGGACCTTATGGACATGATT+GGG | - | chr3.2:70776364-70776383 | MS.gene25783:CDS | 40.0% | |
| TTGTCATCCTCAACAGCTTA+AGG | - | chr3.2:70775875-70775894 | MS.gene25783:CDS | 40.0% | |
| ! | CAGGTTGTTATTGATGAGAG+TGG | - | chr3.2:70776344-70776363 | MS.gene25783:CDS | 40.0% |
| ! | GGAGTTAGAGAGTGAGATTT+TGG | + | chr3.2:70775643-70775662 | None:intergenic | 40.0% |
| !! | CATTGATGATGAAGAGGAAG+AGG | - | chr3.2:70776718-70776737 | MS.gene25783:CDS | 40.0% |
| !! | CTGATTGTGTTGATTGGTAC+TGG | - | chr3.2:70776233-70776252 | MS.gene25783:CDS | 40.0% |
| !! | TTGTGTTGATTGGTACTGGA+TGG | - | chr3.2:70776237-70776256 | MS.gene25783:CDS | 40.0% |
| !!! | GTTTTTGAAGCCGTTTCTTC+AGG | - | chr3.2:70776262-70776281 | MS.gene25783:CDS | 40.0% |
| ACTAATCCAAACCGCAGCAA+GGG | + | chr3.2:70776024-70776043 | None:intergenic | 45.0% | |
| GTGGACCTTATGGACATGAT+TGG | - | chr3.2:70776363-70776382 | MS.gene25783:CDS | 45.0% | |
| TAGGGTTGTGGTTTATGCGT+TGG | - | chr3.2:70776574-70776593 | MS.gene25783:CDS | 45.0% | |
| ! | ATTTTACCCTTGCTGCGGTT+TGG | - | chr3.2:70776015-70776034 | MS.gene25783:CDS | 45.0% |
| ! | GACTTTGGAGAGATCGAGAT+TGG | + | chr3.2:70775664-70775683 | None:intergenic | 45.0% |
| ! | GGTCTATTTTACCCTTGCTG+CGG | - | chr3.2:70776010-70776029 | MS.gene25783:CDS | 45.0% |
| !! | CTGTGTTGTTTCCGATTGTG+TGG | - | chr3.2:70776435-70776454 | MS.gene25783:CDS | 45.0% |
| !! | TACTGGAAGTGCTCATGGAT+GGG | - | chr3.2:70776160-70776179 | MS.gene25783:CDS | 45.0% |
| !! | TCGGTATTCTTGGACTAGTG+TGG | - | chr3.2:70776613-70776632 | MS.gene25783:CDS | 45.0% |
| CACTAATCCAAACCGCAGCA+AGG | + | chr3.2:70776025-70776044 | None:intergenic | 50.0% | |
| GATCTCGGAGAAACGGATCT+CGG | + | chr3.2:70775544-70775563 | None:intergenic | 50.0% | |
| GGGGTATAAGTTCAAGCCAG+AGG | - | chr3.2:70776676-70776695 | MS.gene25783:CDS | 50.0% | |
| TAGTGTGGTTGCTGCTGAGT+TGG | - | chr3.2:70776628-70776647 | MS.gene25783:CDS | 50.0% | |
| TCCTCTGCACTCTCGATTCA+TGG | - | chr3.2:70775691-70775710 | MS.gene25783:CDS | 50.0% | |
| ! | GCAGAGGAAGAAACCGACTT+TGG | + | chr3.2:70775679-70775698 | None:intergenic | 50.0% |
| !! | AAGCGTACTGGAAGTGCTCA+TGG | - | chr3.2:70776155-70776174 | MS.gene25783:CDS | 50.0% |
| !! | GTACTGGAAGTGCTCATGGA+TGG | - | chr3.2:70776159-70776178 | MS.gene25783:CDS | 50.0% |
| ACGATCGTCGTTGCGGATCT+CGG | + | chr3.2:70775559-70775578 | None:intergenic | 55.0% | |
| AGAATCTTCGTGAGGCTGCG+AGG | - | chr3.2:70776465-70776484 | MS.gene25783:CDS | 55.0% | |
| CGTTGCGGATCTCGGAGAAA+CGG | + | chr3.2:70775551-70775570 | None:intergenic | 55.0% | |
| GAAACGGATCTCGGAGAAGG+TGG | + | chr3.2:70775535-70775554 | None:intergenic | 55.0% | |
| GGAGAAACGGATCTCGGAGA+AGG | + | chr3.2:70775538-70775557 | None:intergenic | 55.0% | |
| GGATCTCGGAGAAGGTGGTT+GGG | + | chr3.2:70775530-70775549 | None:intergenic | 55.0% | |
| TGATGGGACGATCGTCGTTG+CGG | + | chr3.2:70775566-70775585 | None:intergenic | 55.0% | |
| TGCGAGGACTGATGGGAAAG+CGG | - | chr3.2:70776481-70776500 | MS.gene25783:CDS | 55.0% | |
| TGGTGAAGAGGAGGAGGAGA+GGG | + | chr3.2:70775503-70775522 | None:intergenic | 55.0% | |
| ! | GCCATGAATCGAGAGTGCAG+AGG | + | chr3.2:70775695-70775714 | None:intergenic | 55.0% |
| AGAGGAAGAGGCTGCTGCTG+AGG | - | chr3.2:70776730-70776749 | MS.gene25783:CDS | 60.0% | |
| CGGATCTCGGAGAAGGTGGT+TGG | + | chr3.2:70775531-70775550 | None:intergenic | 60.0% | |
| CTCGGAGAAGGTGGTTGGGA+GGG | + | chr3.2:70775526-70775545 | None:intergenic | 60.0% | |
| GAGGACTGATGGGAAAGCGG+CGG | - | chr3.2:70776484-70776503 | MS.gene25783:CDS | 60.0% | |
| GTGAGGCTGCGAGGACTGAT+GGG | - | chr3.2:70776474-70776493 | MS.gene25783:CDS | 60.0% | |
| GTGGTGAAGAGGAGGAGGAG+AGG | + | chr3.2:70775504-70775523 | None:intergenic | 60.0% | |
| TCTCGGAGAAGGTGGTTGGG+AGG | + | chr3.2:70775527-70775546 | None:intergenic | 60.0% | |
| TGAAGAGGAGGAGGAGAGGG+AGG | + | chr3.2:70775500-70775519 | None:intergenic | 60.0% | |
| TGGTTGGGAGGGTGGTGAAG+AGG | + | chr3.2:70775515-70775534 | None:intergenic | 60.0% | |
| TTGGGAGGGTGGTGAAGAGG+AGG | + | chr3.2:70775512-70775531 | None:intergenic | 60.0% | |
| AGAGGAGGAGGAGAGGGAGG+AGG | + | chr3.2:70775497-70775516 | None:intergenic | 65.0% | |
| CGTGAGGCTGCGAGGACTGA+TGG | - | chr3.2:70776473-70776492 | MS.gene25783:CDS | 65.0% | |
| GGAGAAGGTGGTTGGGAGGG+TGG | + | chr3.2:70775523-70775542 | None:intergenic | 65.0% | |
| GGAGGGTGGTGAAGAGGAGG+AGG | + | chr3.2:70775509-70775528 | None:intergenic | 65.0% | |
| GGAGGAGAGGGAGGAGGAGG+TGG | + | chr3.2:70775491-70775510 | None:intergenic | 70.0% | |
| GGAGGAGGAGAGGGAGGAGG+AGG | + | chr3.2:70775494-70775513 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 70775477 | 70776784 | 70775477 | ID=MS.gene25783 |
| chr3.2 | mRNA | 70775477 | 70776784 | 70775477 | ID=MS.gene25783.t1;Parent=MS.gene25783 |
| chr3.2 | exon | 70775477 | 70776784 | 70775477 | ID=MS.gene25783.t1.exon1;Parent=MS.gene25783.t1 |
| chr3.2 | CDS | 70775477 | 70776784 | 70775477 | ID=cds.MS.gene25783.t1;Parent=MS.gene25783.t1 |
| Gene Sequence |
| Protein sequence |
