Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019409.t1 | XP_013444989.1 | 99.3 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 1.50E-68 | 268.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019409.t1 | O64644 | 72.0 | 125 | 34 | 1 | 27 | 150 | 27 | 151 | 1.0e-46 | 187.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019409.t1 | G7ZXR9 | 99.3 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 1.1e-68 | 268.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007416 | MS.gene019409 | PPI |
| MS.gene20079 | MS.gene019409 | PPI |
| MS.gene22417 | MS.gene019409 | PPI |
| MS.gene019409 | MS.gene007531 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019409.t1 | MTR_8g033340 | 99.338 | 151 | 1 | 0 | 1 | 151 | 1 | 151 | 1.04e-107 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019409.t1 | AT2G45640 | 67.550 | 151 | 48 | 1 | 1 | 150 | 1 | 151 | 2.26e-59 | 181 |
| MS.gene019409.t1 | AT2G45640 | 66.225 | 151 | 47 | 2 | 1 | 150 | 1 | 148 | 8.14e-56 | 172 |
Find 41 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATCTGAACTTCATCTTT+AGG | 0.252278 | 8.2:+63951641 | None:intergenic |
| GGTCTGCCGCCTTGTCGTTT+TGG | 0.303236 | 8.2:+63951907 | None:intergenic |
| GGCAAGGCTTTAGCCGATCT+TGG | 0.386747 | 8.2:-63947827 | MS.gene019409:CDS |
| GCGTTTCTTCTTCTTGCAGC+AGG | 0.399744 | 8.2:+63949239 | None:intergenic |
| CCTCTTGGTGGTGGAGGTAA+TGG | 0.405437 | 8.2:+63951886 | None:intergenic |
| GTGGGCAAGACATTGTCTTA+TGG | 0.420586 | 8.2:-63947869 | MS.gene019409:CDS |
| GATGGAGGAGGCGGACCTCT+TGG | 0.424184 | 8.2:+63951871 | None:intergenic |
| TGCGCAGATTGGTGATTACT+TGG | 0.452787 | 8.2:-63947729 | MS.gene019409:intron |
| GGACGGGAGGATGGAGGAGG+CGG | 0.460368 | 8.2:+63951862 | None:intergenic |
| GGCGGACCTCTTGGTGGTGG+AGG | 0.473936 | 8.2:+63951880 | None:intergenic |
| GGAGGCGGACCTCTTGGTGG+TGG | 0.474246 | 8.2:+63951877 | None:intergenic |
| CGAGGACGGGAGGATGGAGG+AGG | 0.477646 | 8.2:+63951859 | None:intergenic |
| CTTTACCTCAAAACCAAGAT+CGG | 0.479352 | 8.2:+63947814 | None:intergenic |
| CTCCGTGTGTTCACTAAGAT+AGG | 0.484530 | 8.2:-63951707 | MS.gene019409:CDS |
| AAGACATTGTCTTATGGAAC+TGG | 0.485281 | 8.2:-63947863 | MS.gene019409:CDS |
| GATAGGAAGCCATCATTCAA+TGG | 0.497710 | 8.2:-63951690 | MS.gene019409:CDS |
| AACTGGTTCGAGACGAGGAC+GGG | 0.498527 | 8.2:+63951846 | None:intergenic |
| CGAACCAGTTGATCGCGAAA+AGG | 0.502030 | 8.2:-63951833 | MS.gene019409:intron |
| GGAGGAGGCGGACCTCTTGG+TGG | 0.505652 | 8.2:+63951874 | None:intergenic |
| TTACCTCTTGAACTTTGAAA+CGG | 0.506136 | 8.2:+63949177 | None:intergenic |
| TCGAGACGAGGACGGGAGGA+TGG | 0.508378 | 8.2:+63951853 | None:intergenic |
| GTGAACACACGGAGGAGCAA+GGG | 0.568130 | 8.2:+63951716 | None:intergenic |
| GATTGGTGATTACTTGGATG+TGG | 0.571029 | 8.2:-63947723 | MS.gene019409:CDS |
| ATGAAGTTCAGATTTATACA+TGG | 0.575884 | 8.2:-63951634 | MS.gene019409:CDS |
| AGTGAACACACGGAGGAGCA+AGG | 0.581241 | 8.2:+63951715 | None:intergenic |
| CGAAAGAATACATACAAGAT+CGG | 0.582794 | 8.2:+63951586 | None:intergenic |
| TGGCCGTTTCAAAGTTCAAG+AGG | 0.586342 | 8.2:-63949180 | MS.gene019409:intron |
| GTCGAAGAAATGAGCGACGG+AGG | 0.590510 | 8.2:-63951931 | None:intergenic |
| CGATCAACTGGTTCGAGACG+AGG | 0.592470 | 8.2:+63951841 | None:intergenic |
| GGAACTGGAAGATTAGATGA+TGG | 0.596367 | 8.2:-63947848 | MS.gene019409:CDS |
| AGACGAGGACGGGAGGATGG+AGG | 0.601741 | 8.2:+63951856 | None:intergenic |
| TGGTTCGAGACGAGGACGGG+AGG | 0.604236 | 8.2:+63951849 | None:intergenic |
| TGAACACACGGAGGAGCAAG+GGG | 0.609653 | 8.2:+63951717 | None:intergenic |
| CAACTGGTTCGAGACGAGGA+CGG | 0.612970 | 8.2:+63951845 | None:intergenic |
| TGGAAGATTAGATGATGGCA+AGG | 0.613081 | 8.2:-63947843 | MS.gene019409:CDS |
| GACGGAGGACCAAAACGACA+AGG | 0.629621 | 8.2:-63951916 | MS.gene019409:CDS |
| TTCCTATCTTAGTGAACACA+CGG | 0.638856 | 8.2:+63951705 | None:intergenic |
| CCATTACCTCCACCACCAAG+AGG | 0.666000 | 8.2:-63951886 | MS.gene019409:CDS |
| AGTGTCGAAGAAATGAGCGA+CGG | 0.704284 | 8.2:-63951934 | None:intergenic |
| GGAGGACCAAAACGACAAGG+CGG | 0.709504 | 8.2:-63951913 | MS.gene019409:CDS |
| CTATCTTAGTGAACACACGG+AGG | 0.795134 | 8.2:+63951708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAATATTATTATAGAT+AGG | - | chr8.2:63948797-63948816 | MS.gene019409:intron | 10.0% |
| !!! | TATTAATGTATATTTTGTAT+AGG | - | chr8.2:63950358-63950377 | MS.gene019409:intron | 10.0% |
| !! | AGTTATTGAATAAACTAAAA+AGG | + | chr8.2:63949776-63949795 | None:intergenic | 15.0% |
| !! | ATAAATATTATATGTATCAG+AGG | + | chr8.2:63950861-63950880 | None:intergenic | 15.0% |
| !! | TAAATATTATATGTATCAGA+GGG | + | chr8.2:63950860-63950879 | None:intergenic | 15.0% |
| !! | TTTAAACATGTTATAAGTTA+AGG | - | chr8.2:63951086-63951105 | MS.gene019409:intron | 15.0% |
| !!! | ACTTTCATAATTTGTTATAT+TGG | + | chr8.2:63951404-63951423 | None:intergenic | 15.0% |
| !!! | ATAACTTTTTGGAAAAAATA+TGG | + | chr8.2:63951654-63951673 | None:intergenic | 15.0% |
| !! | AAAACTAAAAGTTACTACAA+CGG | + | chr8.2:63950286-63950305 | None:intergenic | 20.0% |
| !! | ATATAAACCATGAATAAACT+AGG | + | chr8.2:63949055-63949074 | None:intergenic | 20.0% |
| !! | ATTATTATAGATAGGCTTAT+AGG | - | chr8.2:63948805-63948824 | MS.gene019409:intron | 20.0% |
| !! | GTGAATAAGTGTTTAATTAA+GGG | - | chr8.2:63948856-63948875 | MS.gene019409:intron | 20.0% |
| !! | TAATAATAACCCTAAAATGA+GGG | - | chr8.2:63951299-63951318 | MS.gene019409:intron | 20.0% |
| !! | TAGTTTATTCATGGTTTATA+TGG | - | chr8.2:63949054-63949073 | MS.gene019409:intron | 20.0% |
| !! | TATAAATTACTTGTGTTTGT+GGG | + | chr8.2:63951033-63951052 | None:intergenic | 20.0% |
| !! | TATAGGTTATTAGGTTTATT+TGG | - | chr8.2:63948261-63948280 | MS.gene019409:intron | 20.0% |
| !! | TATGCACAAAAAGAAAATAA+TGG | + | chr8.2:63950525-63950544 | None:intergenic | 20.0% |
| !! | TGAAATAAATACTACATCAT+AGG | - | chr8.2:63950668-63950687 | MS.gene019409:intron | 20.0% |
| !! | TGTGAATAAGTGTTTAATTA+AGG | - | chr8.2:63948855-63948874 | MS.gene019409:intron | 20.0% |
| !! | TTAATAATAACCCTAAAATG+AGG | - | chr8.2:63951298-63951317 | MS.gene019409:intron | 20.0% |
| !! | TTAATGATGATATACTCTAT+TGG | - | chr8.2:63948899-63948918 | MS.gene019409:intron | 20.0% |
| !! | TTATAAATTACTTGTGTTTG+TGG | + | chr8.2:63951034-63951053 | None:intergenic | 20.0% |
| !! | TTATGATCATCAATAAAACA+AGG | + | chr8.2:63949861-63949880 | None:intergenic | 20.0% |
| !! | TTCAAATTATTAGTCAGAAT+AGG | - | chr8.2:63949997-63950016 | MS.gene019409:intron | 20.0% |
| !!! | ATAAAAAGAAGTTAGGTTTT+AGG | + | chr8.2:63947856-63947875 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTATAAGCTTTTG+TGG | - | chr8.2:63948622-63948641 | MS.gene019409:intron | 20.0% |
| !!! | ATTTCTTTTTAGCTTATGAT+TGG | - | chr8.2:63950332-63950351 | MS.gene019409:intron | 20.0% |
| !!! | CAAGTCAAAAGATTTTATAT+TGG | + | chr8.2:63950824-63950843 | None:intergenic | 20.0% |
| !!! | CTTATAACGGAATTTTAATT+AGG | + | chr8.2:63950046-63950065 | None:intergenic | 20.0% |
| !!! | TAATGTGTTTTGCTTTTTTT+GGG | - | chr8.2:63950586-63950605 | MS.gene019409:intron | 20.0% |
| !!! | TCATTTTAGGGTTATTATTA+AGG | + | chr8.2:63951299-63951318 | None:intergenic | 20.0% |
| !!! | TTGTAGTAACTTTTAGTTTT+TGG | - | chr8.2:63950286-63950305 | MS.gene019409:intron | 20.0% |
| !!! | TTGTTTTCAGCTTAAAAAAA+TGG | - | chr8.2:63949543-63949562 | MS.gene019409:intron | 20.0% |
| !!! | TTTTGACTTGTATTATTGTT+GGG | - | chr8.2:63950834-63950853 | MS.gene019409:intron | 20.0% |
| ! | AAAAACAGCATTAGGATTAT+AGG | - | chr8.2:63948244-63948263 | MS.gene019409:intron | 25.0% |
| ! | AAAAATCATCCATTGAATGA+TGG | + | chr8.2:63947956-63947975 | None:intergenic | 25.0% |
| ! | AAAACACTTGTAAGACTATT+GGG | + | chr8.2:63948457-63948476 | None:intergenic | 25.0% |
| ! | AAAATTAACAAGGTCAAGAA+TGG | + | chr8.2:63947880-63947899 | None:intergenic | 25.0% |
| ! | AAATGAAAAAGTAGGAAATG+GGG | - | chr8.2:63950247-63950266 | MS.gene019409:intron | 25.0% |
| ! | ACTTCAAGATTCATATATTG+GGG | - | chr8.2:63950963-63950982 | MS.gene019409:intron | 25.0% |
| ! | AGAAATAGATTATGCATAAG+CGG | - | chr8.2:63949254-63949273 | MS.gene019409:CDS | 25.0% |
| ! | AGAATAGGAAATGAAAAAGT+AGG | - | chr8.2:63950239-63950258 | MS.gene019409:intron | 25.0% |
| ! | AGAATAGGAAATGAAAATGT+AGG | - | chr8.2:63950012-63950031 | MS.gene019409:intron | 25.0% |
| ! | AGGACAATATTCTCTTATAA+CGG | + | chr8.2:63950059-63950078 | None:intergenic | 25.0% |
| ! | ATAAACCGTAAAATGAGAAA+AGG | + | chr8.2:63949453-63949472 | None:intergenic | 25.0% |
| ! | ATGAAGTTCAGATTTATACA+TGG | - | chr8.2:63948000-63948019 | MS.gene019409:intron | 25.0% |
| ! | ATGAATAAACTAGGAGAAAA+GGG | + | chr8.2:63949046-63949065 | None:intergenic | 25.0% |
| ! | ATGATCATCAATAAAACAGA+AGG | + | chr8.2:63950079-63950098 | None:intergenic | 25.0% |
| ! | ATTTCACAATTAAACCAACT+TGG | + | chr8.2:63950654-63950673 | None:intergenic | 25.0% |
| ! | CAATTTCTATAATCGAAGAT+GGG | + | chr8.2:63949655-63949674 | None:intergenic | 25.0% |
| ! | CACTTCAAGATTCATATATT+GGG | - | chr8.2:63950962-63950981 | MS.gene019409:intron | 25.0% |
| ! | CATTAGGATTATAGGTTATT+AGG | - | chr8.2:63948252-63948271 | MS.gene019409:intron | 25.0% |
| ! | GAAATGAAAAAGTAGGAAAT+GGG | - | chr8.2:63950246-63950265 | MS.gene019409:intron | 25.0% |
| ! | GAATGGAATAAAAAGAAGTT+AGG | + | chr8.2:63947863-63947882 | None:intergenic | 25.0% |
| ! | GGAAATAGAGAAAATTAACA+AGG | + | chr8.2:63947890-63947909 | None:intergenic | 25.0% |
| ! | TAAAACACTTGTAAGACTAT+TGG | + | chr8.2:63948458-63948477 | None:intergenic | 25.0% |
| ! | TAAATCTGAACTTCATCTTT+AGG | + | chr8.2:63947996-63948015 | None:intergenic | 25.0% |
| ! | TCAATTTCTATAATCGAAGA+TGG | + | chr8.2:63949656-63949675 | None:intergenic | 25.0% |
| ! | TCACTTCAAGATTCATATAT+TGG | - | chr8.2:63950961-63950980 | MS.gene019409:intron | 25.0% |
| ! | TTGAGTGAGCTTAAAAAAAA+TGG | - | chr8.2:63949119-63949138 | MS.gene019409:intron | 25.0% |
| ! | TTTGTGTTTCCTGATAAAAA+TGG | - | chr8.2:63950434-63950453 | MS.gene019409:intron | 25.0% |
| !! | AAAAGATGGGAATAACTTTT+TGG | + | chr8.2:63951665-63951684 | None:intergenic | 25.0% |
| !! | AATTTTACACTAATGTCCAA+TGG | + | chr8.2:63948993-63949012 | None:intergenic | 25.0% |
| !! | ACATGTTTAGAAGATGTTTT+CGG | + | chr8.2:63948666-63948685 | None:intergenic | 25.0% |
| !! | CTTTATTCCTTTCTTTTTGA+AGG | + | chr8.2:63949958-63949977 | None:intergenic | 25.0% |
| !! | CTTTTTACAGCATATACATT+TGG | + | chr8.2:63951611-63951630 | None:intergenic | 25.0% |
| !! | TGTATTCAACAATTTTTCCA+TGG | - | chr8.2:63949912-63949931 | MS.gene019409:intron | 25.0% |
| !! | TTTCAACTTATTTAGAGCTT+AGG | - | chr8.2:63949589-63949608 | MS.gene019409:intron | 25.0% |
| !! | TTTTCAAACTTGTGCAAAAT+AGG | + | chr8.2:63951188-63951207 | None:intergenic | 25.0% |
| !!! | ACTACAACGGAATTTTAATT+AGG | + | chr8.2:63950273-63950292 | None:intergenic | 25.0% |
| !!! | AGTAACTTTTAGTTTTTGGA+TGG | - | chr8.2:63950290-63950309 | MS.gene019409:intron | 25.0% |
| !!! | CGCAGTGTTTTTATTTTTTT+AGG | - | chr8.2:63948069-63948088 | MS.gene019409:intron | 25.0% |
| !!! | CTTTATTCCTTTGTTTTTGA+AGG | + | chr8.2:63950178-63950197 | None:intergenic | 25.0% |
| !!! | CTTTTGACTTGTATTATTGT+TGG | - | chr8.2:63950833-63950852 | MS.gene019409:intron | 25.0% |
| !!! | GAGTATTATAGAGTTTTTTG+TGG | - | chr8.2:63950717-63950736 | MS.gene019409:intron | 25.0% |
| !!! | GTAATGTGTTTTGCTTTTTT+TGG | - | chr8.2:63950585-63950604 | MS.gene019409:intron | 25.0% |
| !!! | TAATTTGCACTTTTGTCTAA+GGG | - | chr8.2:63948294-63948313 | MS.gene019409:intron | 25.0% |
| !!! | TTAATTTGCACTTTTGTCTA+AGG | - | chr8.2:63948293-63948312 | MS.gene019409:intron | 25.0% |
| !!! | TTTGTTTTCATAAGCTATCT+TGG | - | chr8.2:63948368-63948387 | MS.gene019409:intron | 25.0% |
| AAATGAAAATGTAGGAAACG+GGG | - | chr8.2:63950020-63950039 | MS.gene019409:intron | 30.0% | |
| ACTATATTGACAGTAACCAA+AGG | + | chr8.2:63951579-63951598 | None:intergenic | 30.0% | |
| ATAGCATAAACACTTCTGTA+AGG | - | chr8.2:63949486-63949505 | MS.gene019409:intron | 30.0% | |
| CATGAATAAACTAGGAGAAA+AGG | + | chr8.2:63949047-63949066 | None:intergenic | 30.0% | |
| CCAAAAGAAAAAACAGCATT+AGG | - | chr8.2:63948236-63948255 | MS.gene019409:intron | 30.0% | |
| CGAAAGAATACATACAAGAT+CGG | + | chr8.2:63948051-63948070 | None:intergenic | 30.0% | |
| GAAATGAAAATGTAGGAAAC+GGG | - | chr8.2:63950019-63950038 | MS.gene019409:intron | 30.0% | |
| GATTGCAACTTACAAAAGAT+GGG | + | chr8.2:63951678-63951697 | None:intergenic | 30.0% | |
| GCAAAATTCTTGATACTCAT+TGG | - | chr8.2:63949380-63949399 | MS.gene019409:intron | 30.0% | |
| GGAAATGAAAAAGTAGGAAA+TGG | - | chr8.2:63950245-63950264 | MS.gene019409:intron | 30.0% | |
| GGAAATGAAAATGTAGGAAA+CGG | - | chr8.2:63950018-63950037 | MS.gene019409:intron | 30.0% | |
| TATTAGTCAGAACTCAGAAT+AGG | - | chr8.2:63950224-63950243 | MS.gene019409:intron | 30.0% | |
| TCATGATTTCTCAAAGATGT+CGG | + | chr8.2:63948942-63948961 | None:intergenic | 30.0% | |
| TGATTGCAACTTACAAAAGA+TGG | + | chr8.2:63951679-63951698 | None:intergenic | 30.0% | |
| TGTTTAATTAAGGGTGAGTT+TGG | - | chr8.2:63948865-63948884 | MS.gene019409:intron | 30.0% | |
| TTTCAACTTATTGAGAGCTT+AGG | - | chr8.2:63949172-63949191 | MS.gene019409:intron | 30.0% | |
| ! | AATTTGCACTTTTGTCTAAG+GGG | - | chr8.2:63948295-63948314 | MS.gene019409:intron | 30.0% |
| ! | ATCTTACTTGCTAACTTACT+GGG | - | chr8.2:63951461-63951480 | MS.gene019409:intron | 30.0% |
| ! | ATTGGCTTATTTGAACTTAC+CGG | + | chr8.2:63948744-63948763 | None:intergenic | 30.0% |
| ! | CAATAACTGCAAAATGCTTT+TGG | - | chr8.2:63949788-63949807 | MS.gene019409:intron | 30.0% |
| ! | CTTTTCTCCTAGTTTATTCA+TGG | - | chr8.2:63949045-63949064 | MS.gene019409:intron | 30.0% |
| ! | GAGAAAAGAGTTTCATTTTC+TGG | + | chr8.2:63951119-63951138 | None:intergenic | 30.0% |
| ! | GGAATGTTATTGCTGTTAAT+CGG | - | chr8.2:63951343-63951362 | MS.gene019409:intron | 30.0% |
| ! | GGTTATTATTAAGGTGCTAA+AGG | + | chr8.2:63951290-63951309 | None:intergenic | 30.0% |
| ! | GTCTTACAAGTGTTTTATGT+CGG | - | chr8.2:63948461-63948480 | MS.gene019409:intron | 30.0% |
| ! | TAACCATAGACACTTTTGTA+AGG | - | chr8.2:63949087-63949106 | MS.gene019409:intron | 30.0% |
| ! | TGTCTCCTTTTCTCATTTTA+CGG | - | chr8.2:63949445-63949464 | MS.gene019409:intron | 30.0% |
| ! | TTACCTCTTGAACTTTGAAA+CGG | + | chr8.2:63950460-63950479 | None:intergenic | 30.0% |
| ! | TTTTGAGCCTTCAAAAACAA+AGG | - | chr8.2:63950168-63950187 | MS.gene019409:intron | 30.0% |
| ! | TTTTGAGCCTTCAAAAAGAA+AGG | - | chr8.2:63949948-63949967 | MS.gene019409:intron | 30.0% |
| ! | TTTTGTATAGGTCAAAGAAG+TGG | - | chr8.2:63950370-63950389 | MS.gene019409:intron | 30.0% |
| !! | AAACCTTACAAAAGTGTCTA+TGG | + | chr8.2:63949093-63949112 | None:intergenic | 30.0% |
| !! | AAAGAGTTTCATTTTCTGGT+AGG | + | chr8.2:63951115-63951134 | None:intergenic | 30.0% |
| !! | ATGGATGATTTTTCAGTTAG+AGG | - | chr8.2:63947963-63947982 | MS.gene019409:intron | 30.0% |
| !! | TGGATGATTTTTCAGTTAGA+GGG | - | chr8.2:63947964-63947983 | MS.gene019409:intron | 30.0% |
| !!! | AGAAGTTAGGTTTTAGGTTT+AGG | + | chr8.2:63947850-63947869 | None:intergenic | 30.0% |
| !!! | ATGCTGTTTTTTCTTTTGGT+CGG | + | chr8.2:63948235-63948254 | None:intergenic | 30.0% |
| !!! | CCTAATGCTGTTTTTTCTTT+TGG | + | chr8.2:63948239-63948258 | None:intergenic | 30.0% |
| !!! | GAAGTTAGGTTTTAGGTTTA+GGG | + | chr8.2:63947849-63947868 | None:intergenic | 30.0% |
| !!! | TGTTTTGGAACATTATAGAG+AGG | - | chr8.2:63948536-63948555 | MS.gene019409:intron | 30.0% |
| AAAACTCGAACATCATTCCA+TGG | + | chr8.2:63949932-63949951 | None:intergenic | 35.0% | |
| AAACTCAACACACAACTATG+AGG | + | chr8.2:63948188-63948207 | None:intergenic | 35.0% | |
| AAGACATTGTCTTATGGAAC+TGG | - | chr8.2:63951771-63951790 | MS.gene019409:intron | 35.0% | |
| ACAATCCCAAATATGCTCTA+AGG | + | chr8.2:63948519-63948538 | None:intergenic | 35.0% | |
| ACAATCCGAAATATGCTCTA+AGG | + | chr8.2:63948574-63948593 | None:intergenic | 35.0% | |
| ACTGTAATCGAGTATCATTC+TGG | - | chr8.2:63951251-63951270 | MS.gene019409:intron | 35.0% | |
| AGCTCACTTTGTAATTCCAT+TGG | - | chr8.2:63948974-63948993 | MS.gene019409:intron | 35.0% | |
| AGTTGTGTGTTGAGTTTAAG+TGG | - | chr8.2:63948191-63948210 | MS.gene019409:intron | 35.0% | |
| ATGTATCTTAAGTGCTTTCC+TGG | - | chr8.2:63949279-63949298 | MS.gene019409:intron | 35.0% | |
| ATTATAGAGAGGCTTATGAC+AGG | - | chr8.2:63948547-63948566 | MS.gene019409:intron | 35.0% | |
| CAAAAAATTGCACACAGAAG+CGG | + | chr8.2:63950779-63950798 | None:intergenic | 35.0% | |
| CAGTAAGTTAGCAAGTAAGA+TGG | + | chr8.2:63951462-63951481 | None:intergenic | 35.0% | |
| CTTTACCTCAAAACCAAGAT+CGG | + | chr8.2:63951823-63951842 | None:intergenic | 35.0% | |
| TCGGTAAATAAGCTCAAGTA+AGG | - | chr8.2:63948480-63948499 | MS.gene019409:intron | 35.0% | |
| TGCAATCAAGTGACAAAGAT+AGG | + | chr8.2:63951737-63951756 | None:intergenic | 35.0% | |
| TTCCTATCTTAGTGAACACA+CGG | + | chr8.2:63947932-63947951 | None:intergenic | 35.0% | |
| ! | AAAGTGGATCCCTCATTTTA+GGG | + | chr8.2:63951311-63951330 | None:intergenic | 35.0% |
| ! | CATCTTACTTGCTAACTTAC+TGG | - | chr8.2:63951460-63951479 | MS.gene019409:intron | 35.0% |
| ! | GAGCATATTTCGGATTGTTT+TGG | - | chr8.2:63948576-63948595 | MS.gene019409:intron | 35.0% |
| ! | GGAAAAAGACTAGTTAAGTG+TGG | + | chr8.2:63950889-63950908 | None:intergenic | 35.0% |
| ! | TAAAGTGGATCCCTCATTTT+AGG | + | chr8.2:63951312-63951331 | None:intergenic | 35.0% |
| !! | GAGCATATTTGGGATTGTTT+TGG | - | chr8.2:63948521-63948540 | MS.gene019409:intron | 35.0% |
| !! | GTTTCAATGCTTTGAGGTAA+GGG | + | chr8.2:63951546-63951565 | None:intergenic | 35.0% |
| !! | TTGTTTTTCAATGCGCAGAT+TGG | - | chr8.2:63951894-63951913 | MS.gene019409:CDS | 35.0% |
| !! | TTTCAATGCTTTGAGGTAAG+GGG | + | chr8.2:63951545-63951564 | None:intergenic | 35.0% |
| !!! | TTAACTAGTCTTTTTCCCAG+TGG | - | chr8.2:63950892-63950911 | MS.gene019409:intron | 35.0% |
| !!! | TTGAAACGGCCATTTTTATC+AGG | + | chr8.2:63950446-63950465 | None:intergenic | 35.0% |
| AAATGAGGGATCCACTTTAG+AGG | - | chr8.2:63951313-63951332 | MS.gene019409:intron | 40.0% | |
| AACACACAACTATGAGGTTC+TGG | + | chr8.2:63948182-63948201 | None:intergenic | 40.0% | |
| AATGAGGGATCCACTTTAGA+GGG | - | chr8.2:63951314-63951333 | MS.gene019409:intron | 40.0% | |
| ACAGTTGCTTGGAGCATATT+TGG | - | chr8.2:63948768-63948787 | MS.gene019409:intron | 40.0% | |
| ACTTGATTGCACTATGAAGG+TGG | - | chr8.2:63951746-63951765 | MS.gene019409:intron | 40.0% | |
| AGCCAATCAAAACAGTTGCT+TGG | - | chr8.2:63948757-63948776 | MS.gene019409:intron | 40.0% | |
| AGCCTAACAATATCGTGACA+CGG | + | chr8.2:63948135-63948154 | None:intergenic | 40.0% | |
| AGCCTTAAACAACTTCTGTC+AGG | + | chr8.2:63949820-63949839 | None:intergenic | 40.0% | |
| AGCTTCTGTCGCAATATTGA+GGG | + | chr8.2:63949314-63949333 | None:intergenic | 40.0% | |
| AGGTAAATCTTCTCTCTACG+TGG | - | chr8.2:63950474-63950493 | MS.gene019409:intron | 40.0% | |
| AGGTAATCTGCGCATTACTA+GGG | - | chr8.2:63950688-63950707 | MS.gene019409:intron | 40.0% | |
| ATGGCAGTAACTAGAGTGAT+AGG | + | chr8.2:63950506-63950525 | None:intergenic | 40.0% | |
| CACGGACACATGATTCTAAT+TGG | + | chr8.2:63948117-63948136 | None:intergenic | 40.0% | |
| CAGGACCTTAGAGCATATTT+CGG | - | chr8.2:63948566-63948585 | MS.gene019409:intron | 40.0% | |
| CAGGTCCTTAGAGCATATTT+GGG | - | chr8.2:63948511-63948530 | MS.gene019409:intron | 40.0% | |
| CAGTTGCTTGGAGCATATTT+GGG | - | chr8.2:63948769-63948788 | MS.gene019409:intron | 40.0% | |
| CTTGATTGCACTATGAAGGT+GGG | - | chr8.2:63951747-63951766 | MS.gene019409:intron | 40.0% | |
| GATAGGAAGCCATCATTCAA+TGG | - | chr8.2:63947944-63947963 | MS.gene019409:intron | 40.0% | |
| GCCTTAAACAACTTCTGTCA+GGG | + | chr8.2:63949819-63949838 | None:intergenic | 40.0% | |
| GCTAAGTGAAATGCACTCAT+TGG | - | chr8.2:63951227-63951246 | MS.gene019409:intron | 40.0% | |
| GGAACTGGAAGATTAGATGA+TGG | - | chr8.2:63951786-63951805 | MS.gene019409:intron | 40.0% | |
| GTCACTTGATTGCACTATGA+AGG | - | chr8.2:63951743-63951762 | MS.gene019409:intron | 40.0% | |
| TAGGTAATCTGCGCATTACT+AGG | - | chr8.2:63950687-63950706 | MS.gene019409:intron | 40.0% | |
| TGTCGCAATATTGAGGGAAA+GGG | + | chr8.2:63949308-63949327 | None:intergenic | 40.0% | |
| ! | AACACTTCTGAGAGACTGTT+TGG | + | chr8.2:63948713-63948732 | None:intergenic | 40.0% |
| ! | ACACTTCTGAGAGACTGTTT+GGG | + | chr8.2:63948712-63948731 | None:intergenic | 40.0% |
| ! | ATCCACTTTAGAGGGAAAAC+AGG | - | chr8.2:63951322-63951341 | MS.gene019409:intron | 40.0% |
| ! | GATTGGTGATTACTTGGATG+TGG | - | chr8.2:63951911-63951930 | MS.gene019409:CDS | 40.0% |
| ! | TGGAAGATTAGATGATGGCA+AGG | - | chr8.2:63951791-63951810 | MS.gene019409:intron | 40.0% |
| !! | CTCAAAGCATTGAAACCCTA+CGG | - | chr8.2:63951550-63951569 | MS.gene019409:intron | 40.0% |
| !! | GGTTTCAATGCTTTGAGGTA+AGG | + | chr8.2:63951547-63951566 | None:intergenic | 40.0% |
| !! | TCAGAAGTGTTAATGTCAGC+CGG | - | chr8.2:63948722-63948741 | MS.gene019409:intron | 40.0% |
| !! | TTCCTGTTTTCCCTCTAAAG+TGG | + | chr8.2:63951327-63951346 | None:intergenic | 40.0% |
| !!! | CTCCAAGCAACTGTTTTGAT+TGG | + | chr8.2:63948762-63948781 | None:intergenic | 40.0% |
| !!! | CTGTTTTTTCTTTTGGTCGG+TGG | + | chr8.2:63948232-63948251 | None:intergenic | 40.0% |
| !!! | TTTAGCCGATCTTGGTTTTG+AGG | - | chr8.2:63951815-63951834 | MS.gene019409:intron | 40.0% |
| AGTAACCAAAGGTTGCCGTA+GGG | + | chr8.2:63951568-63951587 | None:intergenic | 45.0% | |
| ATGCTCTGTTCTGTTCCACT+GGG | + | chr8.2:63950910-63950929 | None:intergenic | 45.0% | |
| CAGTAACTAGAGTGATAGGC+AGG | + | chr8.2:63950502-63950521 | None:intergenic | 45.0% | |
| CGTAGGGTTTCAATGCTTTG+AGG | + | chr8.2:63951552-63951571 | None:intergenic | 45.0% | |
| CTATCTTAGTGAACACACGG+AGG | + | chr8.2:63947929-63947948 | None:intergenic | 45.0% | |
| CTCAAGTAAGGCAATACAGC+AGG | - | chr8.2:63948492-63948511 | MS.gene019409:intron | 45.0% | |
| CTCCGTGTGTTCACTAAGAT+AGG | - | chr8.2:63947927-63947946 | MS.gene019409:intron | 45.0% | |
| CTGTCGCAATATTGAGGGAA+AGG | + | chr8.2:63949309-63949328 | None:intergenic | 45.0% | |
| GAGCTTCTGTCGCAATATTG+AGG | + | chr8.2:63949315-63949334 | None:intergenic | 45.0% | |
| GCAGGTCCTTAGAGCATATT+TGG | - | chr8.2:63948510-63948529 | MS.gene019409:intron | 45.0% | |
| GCCCTGACAGAAGTTGTTTA+AGG | - | chr8.2:63949815-63949834 | MS.gene019409:intron | 45.0% | |
| GTCCGTGTCACGATATTGTT+AGG | - | chr8.2:63948130-63948149 | MS.gene019409:intron | 45.0% | |
| GTCGCAATATTGAGGGAAAG+GGG | + | chr8.2:63949307-63949326 | None:intergenic | 45.0% | |
| GTGGGCAAGACATTGTCTTA+TGG | - | chr8.2:63951765-63951784 | MS.gene019409:intron | 45.0% | |
| GTGTCACGATATTGTTAGGC+TGG | - | chr8.2:63948134-63948153 | MS.gene019409:intron | 45.0% | |
| TCGCAATATTGAGGGAAAGG+GGG | + | chr8.2:63949306-63949325 | None:intergenic | 45.0% | |
| TGGCCGTTTCAAAGTTCAAG+AGG | - | chr8.2:63950454-63950473 | MS.gene019409:intron | 45.0% | |
| ! | AGTACCTTTTCGCGATCAAC+TGG | + | chr8.2:63947808-63947827 | None:intergenic | 45.0% |
| ! | CTAGGAGAAAAGGGCATATG+TGG | + | chr8.2:63949037-63949056 | None:intergenic | 45.0% |
| ! | TGCGCAGATTGGTGATTACT+TGG | - | chr8.2:63951905-63951924 | MS.gene019409:CDS | 45.0% |
| !! | AATGCTTTGAGGTAAGGGGT+GGG | + | chr8.2:63951541-63951560 | None:intergenic | 45.0% |
| !! | TGAGGTTCTGGATTCGAACA+CGG | + | chr8.2:63948170-63948189 | None:intergenic | 45.0% |
| CAGTAACCAAAGGTTGCCGT+AGG | + | chr8.2:63951569-63951588 | None:intergenic | 50.0% | |
| CATGCTCTGTTCTGTTCCAC+TGG | + | chr8.2:63950911-63950930 | None:intergenic | 50.0% | |
| CCACTAATGACACGCCAAGT+TGG | - | chr8.2:63950637-63950656 | MS.gene019409:intron | 50.0% | |
| CGAACCAGTTGATCGCGAAA+AGG | - | chr8.2:63947801-63947820 | MS.gene019409:intron | 50.0% | |
| GCGTTTCTTCTTCTTGCAGC+AGG | + | chr8.2:63950398-63950417 | None:intergenic | 50.0% | |
| TGAAACCCTACGGCAACCTT+TGG | - | chr8.2:63951560-63951579 | MS.gene019409:intron | 50.0% | |
| ! | CCAACTTGGCGTGTCATTAG+TGG | + | chr8.2:63950640-63950659 | None:intergenic | 50.0% |
| ! | CTTTTGGTCGGTGGACAAAG+TGG | + | chr8.2:63948223-63948242 | None:intergenic | 50.0% |
| !! | ATGCTTTGAGGTAAGGGGTG+GGG | + | chr8.2:63951540-63951559 | None:intergenic | 50.0% |
| !! | CAATGCTTTGAGGTAAGGGG+TGG | + | chr8.2:63951542-63951561 | None:intergenic | 50.0% |
| !! | GAGGTTCTGGATTCGAACAC+GGG | + | chr8.2:63948169-63948188 | None:intergenic | 50.0% |
| AGTGAACACACGGAGGAGCA+AGG | + | chr8.2:63947922-63947941 | None:intergenic | 55.0% | |
| ATGCAGTCGCGACACGATTG+TGG | + | chr8.2:63950753-63950772 | None:intergenic | 55.0% | |
| CCATTACCTCCACCACCAAG+AGG | - | chr8.2:63947748-63947767 | MS.gene019409:intron | 55.0% | |
| CTGCGCATTACTAGGGAGTG+TGG | - | chr8.2:63950695-63950714 | MS.gene019409:intron | 55.0% | |
| CTGGATTCGAACACGGGTCA+AGG | + | chr8.2:63948163-63948182 | None:intergenic | 55.0% | |
| GACGGAGGACCAAAACGACA+AGG | - | chr8.2:63947718-63947737 | MS.gene019409:CDS | 55.0% | |
| GGAGGACCAAAACGACAAGG+CGG | - | chr8.2:63947721-63947740 | MS.gene019409:CDS | 55.0% | |
| GTGAACACACGGAGGAGCAA+GGG | + | chr8.2:63947921-63947940 | None:intergenic | 55.0% | |
| TATTGAGGGAAAGGGGGTCC+AGG | + | chr8.2:63949300-63949319 | None:intergenic | 55.0% | |
| TGAACACACGGAGGAGCAAG+GGG | + | chr8.2:63947920-63947939 | None:intergenic | 55.0% | |
| ! | GGCAAGGCTTTAGCCGATCT+TGG | - | chr8.2:63951807-63951826 | MS.gene019409:intron | 55.0% |
| !! | AACTGGTTCGAGACGAGGAC+GGG | + | chr8.2:63947791-63947810 | None:intergenic | 55.0% |
| !! | CAACTGGTTCGAGACGAGGA+CGG | + | chr8.2:63947792-63947811 | None:intergenic | 55.0% |
| !! | CCTCTTGGTGGTGGAGGTAA+TGG | + | chr8.2:63947751-63947770 | None:intergenic | 55.0% |
| !! | CGATCAACTGGTTCGAGACG+AGG | + | chr8.2:63947796-63947815 | None:intergenic | 55.0% |
| CGCGACACGATTGTGGAGAG+TGG | + | chr8.2:63950746-63950765 | None:intergenic | 60.0% | |
| !! | GGTCTGCCGCCTTGTCGTTT+TGG | + | chr8.2:63947730-63947749 | None:intergenic | 60.0% |
| AGACGAGGACGGGAGGATGG+AGG | + | chr8.2:63947781-63947800 | None:intergenic | 65.0% | |
| GATGGAGGAGGCGGACCTCT+TGG | + | chr8.2:63947766-63947785 | None:intergenic | 65.0% | |
| GGAGGAGCAAGGGGCAAGTC+TGG | + | chr8.2:63947911-63947930 | None:intergenic | 65.0% | |
| TCGAGACGAGGACGGGAGGA+TGG | + | chr8.2:63947784-63947803 | None:intergenic | 65.0% | |
| TGGTTCGAGACGAGGACGGG+AGG | + | chr8.2:63947788-63947807 | None:intergenic | 65.0% | |
| CGAGGACGGGAGGATGGAGG+AGG | + | chr8.2:63947778-63947797 | None:intergenic | 70.0% | |
| GGACGGGAGGATGGAGGAGG+CGG | + | chr8.2:63947775-63947794 | None:intergenic | 70.0% | |
| GGAGGAGGCGGACCTCTTGG+TGG | + | chr8.2:63947763-63947782 | None:intergenic | 70.0% | |
| GGAGGCGGACCTCTTGGTGG+TGG | + | chr8.2:63947760-63947779 | None:intergenic | 70.0% | |
| !! | GGCGGACCTCTTGGTGGTGG+AGG | + | chr8.2:63947757-63947776 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 63947712 | 63951944 | 63947712 | ID=MS.gene019409 |
| chr8.2 | mRNA | 63947712 | 63951944 | 63947712 | ID=MS.gene019409.t1;Parent=MS.gene019409 |
| chr8.2 | exon | 63951834 | 63951944 | 63951834 | ID=MS.gene019409.t1.exon1;Parent=MS.gene019409.t1 |
| chr8.2 | CDS | 63951834 | 63951944 | 63951834 | ID=cds.MS.gene019409.t1;Parent=MS.gene019409.t1 |
| chr8.2 | exon | 63951601 | 63951744 | 63951601 | ID=MS.gene019409.t1.exon2;Parent=MS.gene019409.t1 |
| chr8.2 | CDS | 63951601 | 63951744 | 63951601 | ID=cds.MS.gene019409.t1;Parent=MS.gene019409.t1 |
| chr8.2 | exon | 63949181 | 63949276 | 63949181 | ID=MS.gene019409.t1.exon3;Parent=MS.gene019409.t1 |
| chr8.2 | CDS | 63949181 | 63949276 | 63949181 | ID=cds.MS.gene019409.t1;Parent=MS.gene019409.t1 |
| chr8.2 | exon | 63947820 | 63947891 | 63947820 | ID=MS.gene019409.t1.exon4;Parent=MS.gene019409.t1 |
| chr8.2 | CDS | 63947820 | 63947891 | 63947820 | ID=cds.MS.gene019409.t1;Parent=MS.gene019409.t1 |
| chr8.2 | exon | 63947712 | 63947744 | 63947712 | ID=MS.gene019409.t1.exon5;Parent=MS.gene019409.t1 |
| chr8.2 | CDS | 63947712 | 63947744 | 63947712 | ID=cds.MS.gene019409.t1;Parent=MS.gene019409.t1 |
| Gene Sequence |
| Protein sequence |
