Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020919.t1 | XP_003617999.1 | 98.6 | 485 | 7 | 0 | 1 | 485 | 1 | 485 | 2.80E-193 | 684.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020919.t1 | Q9P775 | 40.3 | 447 | 234 | 9 | 1 | 434 | 3 | 429 | 5.3e-44 | 180.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020919.t1 | G7K4Y5 | 98.6 | 485 | 7 | 0 | 1 | 485 | 1 | 485 | 2.0e-193 | 684.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020919 | MS.gene38190 | PPI |
| MS.gene006974 | MS.gene020919 | PPI |
| MS.gene020919 | MS.gene81208 | PPI |
| MS.gene38070 | MS.gene020919 | PPI |
| MS.gene020906 | MS.gene020919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020919.t1 | MTR_5g097870 | 98.351 | 485 | 8 | 0 | 1 | 485 | 1 | 485 | 0.0 | 987 |
| MS.gene020919.t1 | MTR_5g097870 | 98.478 | 460 | 7 | 0 | 1 | 460 | 1 | 460 | 0.0 | 935 |
| MS.gene020919.t1 | MTR_2g016160 | 25.778 | 225 | 155 | 3 | 252 | 473 | 62 | 277 | 2.67e-13 | 71.2 |
| MS.gene020919.t1 | MTR_4g096880 | 26.816 | 179 | 115 | 3 | 250 | 419 | 177 | 348 | 9.86e-12 | 67.0 |
| MS.gene020919.t1 | MTR_1g072140 | 26.339 | 224 | 148 | 6 | 242 | 462 | 60 | 269 | 1.62e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020919.t1 | AT4G18905 | 60.563 | 497 | 175 | 8 | 1 | 479 | 1 | 494 | 0.0 | 563 |
| MS.gene020919.t1 | AT4G18905 | 58.185 | 507 | 181 | 8 | 1 | 479 | 1 | 504 | 0.0 | 553 |
| MS.gene020919.t1 | AT4G18900 | 58.405 | 464 | 170 | 7 | 21 | 474 | 5 | 455 | 1.09e-177 | 506 |
| MS.gene020919.t1 | AT4G35370 | 52.609 | 460 | 166 | 7 | 2 | 456 | 3 | 415 | 1.09e-161 | 465 |
| MS.gene020919.t1 | AT1G29260 | 27.016 | 248 | 154 | 6 | 235 | 473 | 47 | 276 | 1.20e-14 | 75.1 |
| MS.gene020919.t1 | AT5G58230 | 28.261 | 184 | 116 | 3 | 246 | 420 | 173 | 349 | 1.47e-13 | 72.8 |
| MS.gene020919.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 275 | 421 | 7.16e-12 | 68.2 |
| MS.gene020919.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.34e-12 | 68.2 |
| MS.gene020919.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.58e-12 | 68.2 |
| MS.gene020919.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 264 | 410 | 8.16e-12 | 68.2 |
| MS.gene020919.t1 | AT2G43770 | 26.840 | 231 | 150 | 7 | 250 | 474 | 95 | 312 | 1.63e-11 | 66.2 |
| MS.gene020919.t1 | AT4G11110 | 29.878 | 164 | 103 | 4 | 256 | 418 | 777 | 929 | 4.73e-11 | 65.9 |
Find 110 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGACCATCCATTGAAATT+TGG | 0.157308 | 5.4:-77155386 | MS.gene020919:CDS |
| AACCCATTCTTGTTGGCTAT+TGG | 0.275591 | 5.4:-77152312 | MS.gene020919:CDS |
| CTGACAAGCGAGTGAAGATT+TGG | 0.281740 | 5.4:-77153855 | MS.gene020919:CDS |
| TTCTTGGCTGTTGGTTCAAT+GGG | 0.292446 | 5.4:-77155405 | MS.gene020919:CDS |
| CTTCTTGGCTGTTGGTTCAA+TGG | 0.294754 | 5.4:-77155406 | MS.gene020919:CDS |
| ATTAGGTGCTGCCGTATTAT+AGG | 0.306215 | 5.4:+77152759 | None:intergenic |
| GGATTTGAGTTATTCAGTTC+GGG | 0.308747 | 5.4:-77156318 | MS.gene020919:CDS |
| GGGACCATCCATTGAAATTT+GGG | 0.330425 | 5.4:-77155385 | MS.gene020919:CDS |
| GCTTCTTGCGACTGGATCTA+TGG | 0.347478 | 5.4:-77152652 | MS.gene020919:CDS |
| TGGCAAAGAGAAAAGGAAAA+AGG | 0.348457 | 5.4:-77155242 | MS.gene020919:CDS |
| GTAAGGACGCCGTCGCATTC+TGG | 0.349631 | 5.4:-77153196 | MS.gene020919:CDS |
| GGAGTATGATTCTGAAGATA+TGG | 0.361330 | 5.4:-77156149 | MS.gene020919:CDS |
| TATGGTAACAGGGAACTTCT+TGG | 0.361380 | 5.4:-77155421 | MS.gene020919:intron |
| CAAGTTCATATCGCGGGTAT+TGG | 0.366174 | 5.4:+77155919 | None:intergenic |
| TCTTCAATTTCATCTTTAGA+AGG | 0.369876 | 5.4:+77158814 | None:intergenic |
| CCATTCTTGTTGGCTATTGG+AGG | 0.382353 | 5.4:-77152309 | MS.gene020919:CDS |
| CCCCTTAAAGGAGGAGAAAA+AGG | 0.386260 | 5.4:-77155836 | MS.gene020919:intron |
| AGGATTTGAGTTATTCAGTT+CGG | 0.394366 | 5.4:-77156319 | MS.gene020919:CDS |
| TCTGCTTTCGAAACCCCTTT+CGG | 0.399941 | 5.4:+77158856 | None:intergenic |
| ATTTGTAACAGGTAAAACTT+TGG | 0.407331 | 5.4:-77152543 | MS.gene020919:intron |
| TTTGTAACAGGTAAAACTTT+GGG | 0.415218 | 5.4:-77152542 | MS.gene020919:intron |
| GCTGTGCAAAGTGGAAATTC+CGG | 0.418822 | 5.4:+77155872 | None:intergenic |
| TCACCATGATATCATCATTC+CGG | 0.419784 | 5.4:-77155891 | MS.gene020919:CDS |
| AAGATTTGGGATGTTGTTGC+TGG | 0.420460 | 5.4:-77153841 | MS.gene020919:CDS |
| CACAGGTTCAAGCAGTTGCT+TGG | 0.423769 | 5.4:-77153483 | MS.gene020919:intron |
| AACAGGAATCAACCTCAATC+CGG | 0.434693 | 5.4:-77152131 | MS.gene020919:CDS |
| TTGCTTGGAACAAGGAATAC+AGG | 0.435006 | 5.4:-77154034 | MS.gene020919:intron |
| GAAAATACGGGAAATTCAAC+AGG | 0.436216 | 5.4:-77152148 | MS.gene020919:CDS |
| GAAGGCATCTCTCGAAAATA+CGG | 0.440647 | 5.4:-77152161 | MS.gene020919:CDS |
| TGATATTACCGACGCCTTGA+AGG | 0.443645 | 5.4:-77157754 | MS.gene020919:CDS |
| CAATTTCGTGGATTCCGAAA+GGG | 0.447261 | 5.4:-77158870 | MS.gene020919:CDS |
| TTAACCGTAGCTGGTGCAAT+TGG | 0.448209 | 5.4:-77157801 | MS.gene020919:CDS |
| ATCCATGTTGAGATCCTTCA+AGG | 0.448626 | 5.4:+77157740 | None:intergenic |
| TTGGCTATTGGAGGCTCAAA+GGG | 0.450629 | 5.4:-77152300 | MS.gene020919:CDS |
| GTCATGCAGCTTCTTGCGAC+TGG | 0.450737 | 5.4:-77152660 | MS.gene020919:intron |
| CCTCCAATAGCCAACAAGAA+TGG | 0.451448 | 5.4:+77152309 | None:intergenic |
| TCTTTAGATGCAACAGAAGA+TGG | 0.451968 | 5.4:+77152502 | None:intergenic |
| GCACAACAGATCCTTCTTAG+TGG | 0.453648 | 5.4:-77153451 | MS.gene020919:CDS |
| ACAGGGAACTTCTTGGCTGT+TGG | 0.465917 | 5.4:-77155414 | MS.gene020919:intron |
| TTATGATTGCCGCAATTTCG+TGG | 0.471697 | 5.4:-77158882 | MS.gene020919:CDS |
| ACTCAGTACTTGGTCTTGCT+TGG | 0.472198 | 5.4:-77154049 | MS.gene020919:CDS |
| CTCCAATAGCCAACAAGAAT+GGG | 0.472248 | 5.4:+77152310 | None:intergenic |
| ATCAAGGTCCCAAATTTCAA+TGG | 0.478209 | 5.4:+77155377 | None:intergenic |
| ACAGGAATCAACCTCAATCC+GGG | 0.485663 | 5.4:-77152130 | MS.gene020919:CDS |
| GTTTGATCATACTGTTGCCT+TGG | 0.487656 | 5.4:-77153425 | MS.gene020919:intron |
| AGTCACACCGACTCAGTACT+TGG | 0.488863 | 5.4:-77154059 | MS.gene020919:CDS |
| GACTGGATCTATGGATAAAA+CGG | 0.491616 | 5.4:-77152643 | MS.gene020919:intron |
| TACCTCTGTATCCTATAATA+CGG | 0.501888 | 5.4:-77152770 | MS.gene020919:CDS |
| AAACTTTGCAGAAGGATGTA+AGG | 0.503411 | 5.4:-77153213 | MS.gene020919:intron |
| GGTAGAGCCATGTGTGGTGT+TGG | 0.505588 | 5.4:-77155266 | MS.gene020919:CDS |
| GTAGAGCCATGTGTGGTGTT+GGG | 0.506307 | 5.4:-77155265 | MS.gene020919:CDS |
| GATGTACCTAGTGAGAGTGT+TGG | 0.506656 | 5.4:+77158783 | None:intergenic |
| CTCAATATTATATCAGGCCC+CGG | 0.510053 | 5.4:+77152112 | None:intergenic |
| AATGGATCATCACTCTGATA+AGG | 0.510295 | 5.4:-77153803 | MS.gene020919:intron |
| AGAGGACAACCCATTCTTGT+TGG | 0.510888 | 5.4:-77152319 | MS.gene020919:CDS |
| TTATATCAGGCCCCGGATTG+AGG | 0.518416 | 5.4:+77152119 | None:intergenic |
| TAGATGCAACAGAAGATGGT+TGG | 0.521703 | 5.4:+77152506 | None:intergenic |
| CAGCGCTGATGTAGAGAGCT+TGG | 0.522228 | 5.4:-77153158 | MS.gene020919:CDS |
| AATTTCGTGGATTCCGAAAG+GGG | 0.523413 | 5.4:-77158869 | MS.gene020919:CDS |
| TGTTGGGTGGCAAAGAGAAA+AGG | 0.525906 | 5.4:-77155249 | MS.gene020919:CDS |
| TGGAAAGTGTACTATTACAA+TGG | 0.526286 | 5.4:-77153821 | MS.gene020919:CDS |
| TTTATACACTTACAACATCA+AGG | 0.526703 | 5.4:+77155361 | None:intergenic |
| GAGTTATTCAGTTCGGGGAA+CGG | 0.531807 | 5.4:-77156312 | MS.gene020919:CDS |
| GTTGGCTATTGGAGGCTCAA+AGG | 0.532924 | 5.4:-77152301 | MS.gene020919:CDS |
| AATTTCCACTTTGCACAGCA+TGG | 0.534774 | 5.4:-77155868 | MS.gene020919:CDS |
| ATTCCGGAATGATGATATCA+TGG | 0.539451 | 5.4:+77155888 | None:intergenic |
| AGAGATGCCTTCGTCAGATA+AGG | 0.541538 | 5.4:+77152172 | None:intergenic |
| GCACATGCTTTAACCGTAGC+TGG | 0.541928 | 5.4:-77157810 | MS.gene020919:CDS |
| TGACAAGCGAGTGAAGATTT+GGG | 0.543098 | 5.4:-77153854 | MS.gene020919:CDS |
| GATCAAACGAACCACTAAGA+AGG | 0.549508 | 5.4:+77153440 | None:intergenic |
| TCAATTTCATCTTTAGAAGG+AGG | 0.552892 | 5.4:+77158817 | None:intergenic |
| AGGTCCCAAATTTCAATGGA+TGG | 0.555988 | 5.4:+77155381 | None:intergenic |
| CATGGATAACTATGATGAAG+AGG | 0.561882 | 5.4:-77157724 | MS.gene020919:CDS |
| GAATGGGTTGTCCTCTGAGA+AGG | 0.566271 | 5.4:+77152326 | None:intergenic |
| TTTACCAATTGCACCAGCTA+CGG | 0.566294 | 5.4:+77157797 | None:intergenic |
| TGATGTAGAGAGCTTGGCAT+GGG | 0.570407 | 5.4:-77153152 | MS.gene020919:CDS |
| AATATACAAGTTCATATCGC+GGG | 0.574203 | 5.4:+77155913 | None:intergenic |
| ACTTGGTCTTGCTTGGAACA+AGG | 0.574512 | 5.4:-77154042 | MS.gene020919:CDS |
| CGCCTTGAAGGATCTCAACA+TGG | 0.577123 | 5.4:-77157742 | MS.gene020919:CDS |
| ATTATAGGATACAGAGGTAA+CGG | 0.581773 | 5.4:+77152774 | None:intergenic |
| TTGCCACCCAACACCACACA+TGG | 0.587638 | 5.4:+77155259 | None:intergenic |
| TTTCGGAATCCACGAAATTG+CGG | 0.589319 | 5.4:+77158873 | None:intergenic |
| CAAACAACAACAGAATCAGT+TGG | 0.589362 | 5.4:+77156109 | None:intergenic |
| AAGGCATCTCTCGAAAATAC+GGG | 0.591917 | 5.4:-77152160 | MS.gene020919:CDS |
| GCAATTGGTAAACCATCCAA+TGG | 0.595294 | 5.4:-77157786 | MS.gene020919:CDS |
| GCAATTTCGTGGATTCCGAA+AGG | 0.597881 | 5.4:-77158871 | MS.gene020919:CDS |
| TCAAGCCATGCTGTGCAAAG+TGG | 0.598638 | 5.4:+77155863 | None:intergenic |
| ACAAAAGAGTGCTCAGTGTG+TGG | 0.598926 | 5.4:+77153127 | None:intergenic |
| CAGTCCGAACATCAAAACAT+TGG | 0.599001 | 5.4:+77152857 | None:intergenic |
| GAAATCAACAAAATACAAAG+AGG | 0.602238 | 5.4:-77154084 | MS.gene020919:CDS |
| TGTTAGGTGAGTCTTGAAGA+TGG | 0.604591 | 5.4:-77152886 | MS.gene020919:intron |
| GAGCCATGTGTGGTGTTGGG+TGG | 0.607120 | 5.4:-77155262 | MS.gene020919:CDS |
| CTGATGTAGAGAGCTTGGCA+TGG | 0.610832 | 5.4:-77153153 | MS.gene020919:CDS |
| TCATCTCCAACACTCTCACT+AGG | 0.616650 | 5.4:-77158789 | MS.gene020919:intron |
| TGTTGTTTGTGCGCGTACTG+AGG | 0.617359 | 5.4:-77156095 | MS.gene020919:CDS |
| GTTGAGATCCTTCAAGGCGT+CGG | 0.622922 | 5.4:+77157746 | None:intergenic |
| AGTAGCATTCTGCACAGATG+TGG | 0.625228 | 5.4:+77152822 | None:intergenic |
| ATTCTGCACAGATGTGGCAT+TGG | 0.628001 | 5.4:+77152828 | None:intergenic |
| GAATATACAAGTTCATATCG+CGG | 0.630543 | 5.4:+77155912 | None:intergenic |
| GCATTCTGGCTATACGTGGT+CGG | 0.636465 | 5.4:-77153182 | MS.gene020919:CDS |
| AGCAAGACCAAGTACTGAGT+CGG | 0.637057 | 5.4:+77154052 | None:intergenic |
| CACGTATAGCCAGAATGCGA+CGG | 0.645659 | 5.4:+77153187 | None:intergenic |
| GATTTGAGTTATTCAGTTCG+GGG | 0.646430 | 5.4:-77156317 | MS.gene020919:CDS |
| CGTCGCATTCTGGCTATACG+TGG | 0.650851 | 5.4:-77153186 | MS.gene020919:CDS |
| CTGGCAGGTATGGATACTTG+AGG | 0.666889 | 5.4:-77155945 | MS.gene020919:intron |
| CAGGAATCAACCTCAATCCG+GGG | 0.674342 | 5.4:-77152129 | MS.gene020919:CDS |
| TGGGACACCTTATCTGACGA+AGG | 0.677489 | 5.4:-77152179 | MS.gene020919:CDS |
| TATGATGAAGAGGATGACAA+AGG | 0.685139 | 5.4:-77157714 | MS.gene020919:intron |
| TGCCGTATTATAGGATACAG+AGG | 0.687331 | 5.4:+77152768 | None:intergenic |
| TGATGAGGTAGAGCCATGTG+TGG | 0.762909 | 5.4:-77155272 | MS.gene020919:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTAATATATATGTTTTTA+AGG | - | chr5.4:77154831-77154850 | MS.gene020919:intron | 10.0% |
| !! | AAAAAAATCCTTGTTAAATA+GGG | + | chr5.4:77155677-77155696 | None:intergenic | 15.0% |
| !! | AAAACTTATAAGATGAAAAT+GGG | - | chr5.4:77152655-77152674 | MS.gene020919:intron | 15.0% |
| !! | AAACAATTTAAATAAGTCAA+GGG | + | chr5.4:77157460-77157479 | None:intergenic | 15.0% |
| !! | ATAATAAATAAAACTAACGA+GGG | + | chr5.4:77158013-77158032 | None:intergenic | 15.0% |
| !! | ATCTTAAAATAGTTTCATTA+TGG | - | chr5.4:77155565-77155584 | MS.gene020919:intron | 15.0% |
| !! | CAATAATAATTAATACAAGA+TGG | + | chr5.4:77153109-77153128 | None:intergenic | 15.0% |
| !! | TAAAACTTATAAGATGAAAA+TGG | - | chr5.4:77152654-77152673 | MS.gene020919:CDS | 15.0% |
| !! | TATAATAAATAAAACTAACG+AGG | + | chr5.4:77158014-77158033 | None:intergenic | 15.0% |
| !! | TTTAAATGCTTCATTAATTA+CGG | - | chr5.4:77157298-77157317 | MS.gene020919:intron | 15.0% |
| !!! | ATCAAGTTTTAATACAAAAA+TGG | + | chr5.4:77156849-77156868 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTAACTAACTTT+TGG | - | chr5.4:77156585-77156604 | MS.gene020919:intron | 15.0% |
| !!! | TAATATATATGTTTTTAAGG+AGG | - | chr5.4:77154834-77154853 | MS.gene020919:intron | 15.0% |
| !!! | TTTTACAAATTACTTAAGAA+AGG | + | chr5.4:77157415-77157434 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACAGAAGTTGT+CGG | + | chr5.4:77158617-77158636 | None:intergenic | 20.0% |
| !! | AAATTACATATTCTATACAG+AGG | - | chr5.4:77152787-77152806 | MS.gene020919:CDS | 20.0% |
| !! | AATAATTATACAAGAAAACG+AGG | + | chr5.4:77156693-77156712 | None:intergenic | 20.0% |
| !! | AATTACATATTCTATACAGA+GGG | - | chr5.4:77152788-77152807 | MS.gene020919:CDS | 20.0% |
| !! | ATAATTATACAAGAAAACGA+GGG | + | chr5.4:77156692-77156711 | None:intergenic | 20.0% |
| !! | ATATACTTTAAATAGCTGAA+AGG | + | chr5.4:77154143-77154162 | None:intergenic | 20.0% |
| !! | ATTAAGTAAAATTAGTACAC+AGG | + | chr5.4:77157927-77157946 | None:intergenic | 20.0% |
| !! | CAAAAAAATCCTTGTTAAAT+AGG | + | chr5.4:77155678-77155697 | None:intergenic | 20.0% |
| !! | CAAACAATTTAAATAAGTCA+AGG | + | chr5.4:77157461-77157480 | None:intergenic | 20.0% |
| !! | CAAATAAAACCATTATGTTA+AGG | + | chr5.4:77157044-77157063 | None:intergenic | 20.0% |
| !! | CTGTTTGAAAATTTAAATGT+TGG | - | chr5.4:77155935-77155954 | MS.gene020919:CDS | 20.0% |
| !! | TAATAAATAAAACTAACGAG+GGG | + | chr5.4:77158012-77158031 | None:intergenic | 20.0% |
| !! | TACAATAGAGATATATAGTA+GGG | + | chr5.4:77158554-77158573 | None:intergenic | 20.0% |
| !! | TCTGTATAGAATATGTAATT+TGG | + | chr5.4:77152788-77152807 | None:intergenic | 20.0% |
| !! | TTAAGTGTTAAATACAGATT+CGG | + | chr5.4:77153067-77153086 | None:intergenic | 20.0% |
| !! | TTACAATAGAGATATATAGT+AGG | + | chr5.4:77158555-77158574 | None:intergenic | 20.0% |
| !!! | AATTTCCAATTTTGTTTTCT+TGG | - | chr5.4:77158055-77158074 | MS.gene020919:intron | 20.0% |
| !!! | ATCTAATTATTTTGCAGTTA+TGG | - | chr5.4:77158805-77158824 | MS.gene020919:CDS | 20.0% |
| !!! | ATTTTTTCTCATGATATATC+AGG | - | chr5.4:77154665-77154684 | MS.gene020919:intron | 20.0% |
| !!! | TCTAATTATTTTGCAGTTAT+GGG | - | chr5.4:77158806-77158825 | MS.gene020919:CDS | 20.0% |
| !!! | TTATAAGTTTTAATCGCTTA+TGG | + | chr5.4:77152646-77152665 | None:intergenic | 20.0% |
| !!! | TTGGTATTTTTCTCTTTTAA+GGG | - | chr5.4:77152678-77152697 | MS.gene020919:intron | 20.0% |
| !!! | TTGTGTATTATTTTTTGTAG+AGG | - | chr5.4:77152881-77152900 | MS.gene020919:CDS | 20.0% |
| !!! | TTTGGATTTTGATTAGTATT+TGG | - | chr5.4:77156603-77156622 | MS.gene020919:intron | 20.0% |
| !!! | TTTTTATCAGAGTAATGAAT+TGG | - | chr5.4:77154721-77154740 | MS.gene020919:intron | 20.0% |
| !!! | TTTTTTTTTGGTGTTTGTTA+GGG | - | chr5.4:77158638-77158657 | MS.gene020919:intron | 20.0% |
| !!! | TTTTTTTTTTGGTGTTTGTT+AGG | - | chr5.4:77158637-77158656 | MS.gene020919:intron | 20.0% |
| ! | AAAGTTCTATATTGTTGACA+GGG | - | chr5.4:77157373-77157392 | MS.gene020919:intron | 25.0% |
| ! | AAATGTAAAAGAAATGGATG+AGG | + | chr5.4:77154009-77154028 | None:intergenic | 25.0% |
| ! | AAGATAATAAGATGATGCAA+AGG | + | chr5.4:77155550-77155569 | None:intergenic | 25.0% |
| ! | AATAAGAAGACTAATACTTG+AGG | - | chr5.4:77155416-77155435 | MS.gene020919:intron | 25.0% |
| ! | AATAGTTTCATTATGGTAAC+AGG | - | chr5.4:77155572-77155591 | MS.gene020919:intron | 25.0% |
| ! | AATATTGCAAACAAAGTGTA+AGG | + | chr5.4:77157668-77157687 | None:intergenic | 25.0% |
| ! | AATGATTTAATTGTCCTGTT+AGG | - | chr5.4:77158102-77158121 | MS.gene020919:intron | 25.0% |
| ! | ACAATAGAGATATATAGTAG+GGG | + | chr5.4:77158553-77158572 | None:intergenic | 25.0% |
| ! | ACTATTTCAATGTAACACAA+TGG | - | chr5.4:77154178-77154197 | MS.gene020919:intron | 25.0% |
| ! | AGTGTTATAAAAACATAGAC+AGG | + | chr5.4:77156169-77156188 | None:intergenic | 25.0% |
| ! | AGTTTCAATTATGAATGAAG+AGG | + | chr5.4:77152259-77152278 | None:intergenic | 25.0% |
| ! | ATAGTTTCATTATGGTAACA+GGG | - | chr5.4:77155573-77155592 | MS.gene020919:intron | 25.0% |
| ! | ATTTGTAACAGGTAAAACTT+TGG | - | chr5.4:77158461-77158480 | MS.gene020919:intron | 25.0% |
| ! | ATTTGTCCCCAATATAAAAA+TGG | - | chr5.4:77152847-77152866 | MS.gene020919:CDS | 25.0% |
| ! | CAAATAATGTGGAATCTAAT+TGG | - | chr5.4:77153766-77153785 | MS.gene020919:intron | 25.0% |
| ! | CAATTAGATTCCACATTATT+TGG | + | chr5.4:77153768-77153787 | None:intergenic | 25.0% |
| ! | CTAAAAGCAACTATTTAAGT+AGG | + | chr5.4:77156391-77156410 | None:intergenic | 25.0% |
| ! | GAAATCAACAAAATACAAAG+AGG | - | chr5.4:77156920-77156939 | MS.gene020919:intron | 25.0% |
| ! | GTATAAATATAAGCAGCATA+AGG | + | chr5.4:77154643-77154662 | None:intergenic | 25.0% |
| ! | GTATTCCTGATTATATTCTT+AGG | + | chr5.4:77154060-77154079 | None:intergenic | 25.0% |
| ! | GTGAGTAGTCAATAAAATTT+GGG | - | chr5.4:77152606-77152625 | MS.gene020919:intron | 25.0% |
| ! | TAAAGTTCTATATTGTTGAC+AGG | - | chr5.4:77157372-77157391 | MS.gene020919:intron | 25.0% |
| ! | TAGATCCAAGAAAACAAAAT+TGG | + | chr5.4:77158063-77158082 | None:intergenic | 25.0% |
| ! | TCAACCACCATAAAATTATT+TGG | - | chr5.4:77155826-77155845 | MS.gene020919:intron | 25.0% |
| ! | TCCATAAGCTACAAATTAAA+CGG | - | chr5.4:77154581-77154600 | MS.gene020919:intron | 25.0% |
| ! | TCTTCAATTTCATCTTTAGA+AGG | + | chr5.4:77152193-77152212 | None:intergenic | 25.0% |
| ! | TGTGAGTAGTCAATAAAATT+TGG | - | chr5.4:77152605-77152624 | MS.gene020919:intron | 25.0% |
| ! | TTCTTTGCAAGTAAAATGTA+GGG | - | chr5.4:77155275-77155294 | MS.gene020919:CDS | 25.0% |
| ! | TTTATACACTTACAACATCA+AGG | + | chr5.4:77155646-77155665 | None:intergenic | 25.0% |
| ! | TTTCTTTGCAAGTAAAATGT+AGG | - | chr5.4:77155274-77155293 | MS.gene020919:CDS | 25.0% |
| ! | TTTGTAACAGGTAAAACTTT+GGG | - | chr5.4:77158462-77158481 | MS.gene020919:intron | 25.0% |
| !! | ACATTTTACTTGCAAAGAAA+TGG | + | chr5.4:77155274-77155293 | None:intergenic | 25.0% |
| !! | ACATTTTTATCGTTGATGTA+TGG | + | chr5.4:77154749-77154768 | None:intergenic | 25.0% |
| !! | ATCCATTTCTTTTACATTTG+AGG | - | chr5.4:77154010-77154029 | MS.gene020919:intron | 25.0% |
| !! | ATTTGGTATTATTTCTTGTC+AGG | + | chr5.4:77152771-77152790 | None:intergenic | 25.0% |
| !! | GAGGTAACCAAATAATTTTA+TGG | + | chr5.4:77155836-77155855 | None:intergenic | 25.0% |
| !! | GTAACCAAATAATTTTATGG+TGG | + | chr5.4:77155833-77155852 | None:intergenic | 25.0% |
| !! | GTTGGTATTTTTCTCTTTTA+AGG | - | chr5.4:77152677-77152696 | MS.gene020919:intron | 25.0% |
| !! | GTTTTACCTGTTACAAATAA+TGG | + | chr5.4:77158459-77158478 | None:intergenic | 25.0% |
| !! | TCCATTTCTTTTACATTTGA+GGG | - | chr5.4:77154011-77154030 | MS.gene020919:intron | 25.0% |
| !! | TTTACTTGATACTTGTTGAT+GGG | - | chr5.4:77155209-77155228 | MS.gene020919:intron | 25.0% |
| !! | TTTGAAGTTTAGCTATCTAA+TGG | - | chr5.4:77157755-77157774 | MS.gene020919:CDS | 25.0% |
| !! | TTTGGTATTATTTCTTGTCA+GGG | + | chr5.4:77152770-77152789 | None:intergenic | 25.0% |
| !! | TTTTTGTAGAGGACTAAATT+GGG | - | chr5.4:77152892-77152911 | MS.gene020919:intron | 25.0% |
| !!! | AATATCATCACTTTTTCCAT+TGG | + | chr5.4:77153237-77153256 | None:intergenic | 25.0% |
| !!! | ACATTTTTTTGTACGACTAA+GGG | + | chr5.4:77153886-77153905 | None:intergenic | 25.0% |
| !!! | AGTCTCTACCATTTTTATAT+TGG | + | chr5.4:77152858-77152877 | None:intergenic | 25.0% |
| !!! | ATTGATCATCTTTTGACTTT+TGG | - | chr5.4:77156555-77156574 | MS.gene020919:intron | 25.0% |
| !!! | GAATACAGGTTTGTTAAATT+TGG | - | chr5.4:77156984-77157003 | MS.gene020919:intron | 25.0% |
| !!! | GTCTCTACCATTTTTATATT+GGG | + | chr5.4:77152857-77152876 | None:intergenic | 25.0% |
| !!! | TACATTTTTTTGTACGACTA+AGG | + | chr5.4:77153887-77153906 | None:intergenic | 25.0% |
| !!! | TCTCTACCATTTTTATATTG+GGG | + | chr5.4:77152856-77152875 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCTTGGATCTAA+AGG | - | chr5.4:77158064-77158083 | MS.gene020919:intron | 25.0% |
| !!! | TTTTTTGTAGAGGACTAAAT+TGG | - | chr5.4:77152891-77152910 | MS.gene020919:intron | 25.0% |
| !!! | TTTTTTTTGGTGTTTGTTAG+GGG | - | chr5.4:77158639-77158658 | MS.gene020919:intron | 25.0% |
| AAAAATAAACCAATCCGAAC+AGG | - | chr5.4:77152561-77152580 | MS.gene020919:intron | 30.0% | |
| AAAAGGAAAAAGGGGAAAAA+TGG | - | chr5.4:77155772-77155791 | MS.gene020919:intron | 30.0% | |
| AAAATTATGAAGGACCAAAC+TGG | - | chr5.4:77152922-77152941 | MS.gene020919:intron | 30.0% | |
| AAAGGAAAAAGGGGAAAAAT+GGG | - | chr5.4:77155773-77155792 | MS.gene020919:intron | 30.0% | |
| AAATTATGAAGGACCAAACT+GGG | - | chr5.4:77152923-77152942 | MS.gene020919:intron | 30.0% | |
| AAGTTGGAACCAAATAATGT+GGG | + | chr5.4:77156019-77156038 | None:intergenic | 30.0% | |
| AATAGCTGAAAGGTTAATTG+TGG | + | chr5.4:77154133-77154152 | None:intergenic | 30.0% | |
| AATATACAAGTTCATATCGC+GGG | + | chr5.4:77155094-77155113 | None:intergenic | 30.0% | |
| ACAATAGAGCAAAATGTACT+TGG | + | chr5.4:77156506-77156525 | None:intergenic | 30.0% | |
| ACTACACTTACCAAATAATG+TGG | - | chr5.4:77153755-77153774 | MS.gene020919:intron | 30.0% | |
| AGTAAAGAACTCATAGGATT+TGG | + | chr5.4:77155195-77155214 | None:intergenic | 30.0% | |
| ATCTTCAATTCATGTTCAGA+AGG | + | chr5.4:77154969-77154988 | None:intergenic | 30.0% | |
| ATGAGTTAAAGATAGATGGA+TGG | + | chr5.4:77153328-77153347 | None:intergenic | 30.0% | |
| ATTATAGGATACAGAGGTAA+CGG | + | chr5.4:77158233-77158252 | None:intergenic | 30.0% | |
| ATTATTGCTTATTGCAGTGT+AGG | - | chr5.4:77153122-77153141 | MS.gene020919:intron | 30.0% | |
| ATTCATAAGGTTTGTAGTGT+TGG | + | chr5.4:77154508-77154527 | None:intergenic | 30.0% | |
| CAATTTAAATAAGTCAAGGG+CGG | + | chr5.4:77157457-77157476 | None:intergenic | 30.0% | |
| CTAGATTTACCAACAACAAA+TGG | - | chr5.4:77156761-77156780 | MS.gene020919:intron | 30.0% | |
| CTATGCTTTCCTTAACATAA+TGG | - | chr5.4:77157032-77157051 | MS.gene020919:intron | 30.0% | |
| CTTATAAGATGAAAATGGGT+TGG | - | chr5.4:77152659-77152678 | MS.gene020919:intron | 30.0% | |
| GAAAAATTGGATCATTACCA+AGG | + | chr5.4:77157599-77157618 | None:intergenic | 30.0% | |
| GAATATACAAGTTCATATCG+CGG | + | chr5.4:77155095-77155114 | None:intergenic | 30.0% | |
| GGAAAAACTATGATAAACCA+AGG | + | chr5.4:77154622-77154641 | None:intergenic | 30.0% | |
| GTATCAAGTAAAGAACTCAT+AGG | + | chr5.4:77155201-77155220 | None:intergenic | 30.0% | |
| GTGAATGAGTTAAAGATAGA+TGG | + | chr5.4:77153332-77153351 | None:intergenic | 30.0% | |
| GTGTTAATAAACTTTGCAGA+AGG | - | chr5.4:77157783-77157802 | MS.gene020919:CDS | 30.0% | |
| GTGTTGAAGATACATACATT+AGG | + | chr5.4:77158265-77158284 | None:intergenic | 30.0% | |
| TACATGTGTCTATGTAATGT+CGG | + | chr5.4:77153511-77153530 | None:intergenic | 30.0% | |
| TACCTCTGTATCCTATAATA+CGG | - | chr5.4:77158234-77158253 | MS.gene020919:intron | 30.0% | |
| TAGAATATGAATGCACAACT+TGG | + | chr5.4:77153839-77153858 | None:intergenic | 30.0% | |
| TAGACACATGTAGTTACATT+TGG | - | chr5.4:77153519-77153538 | MS.gene020919:intron | 30.0% | |
| TCCCTCAAATGTAAAAGAAA+TGG | + | chr5.4:77154015-77154034 | None:intergenic | 30.0% | |
| TTAAGAATACCTGAAGTCAA+AGG | + | chr5.4:77158761-77158780 | None:intergenic | 30.0% | |
| TTACTGCCATTATTTGTAAC+AGG | - | chr5.4:77158450-77158469 | MS.gene020919:intron | 30.0% | |
| TTCCTGATTATATTCTTAGG+TGG | + | chr5.4:77154057-77154076 | None:intergenic | 30.0% | |
| TTCTTGTCAGGGAATAAATT+GGG | + | chr5.4:77152759-77152778 | None:intergenic | 30.0% | |
| TTTCTTGTCAGGGAATAAAT+TGG | + | chr5.4:77152760-77152779 | None:intergenic | 30.0% | |
| ! | AACATGAACTGTCATGTTTT+TGG | + | chr5.4:77155356-77155375 | None:intergenic | 30.0% |
| ! | AAGAAAAAACTGACAGCTTT+TGG | + | chr5.4:77158529-77158548 | None:intergenic | 30.0% |
| ! | AGAATCCAGAATCCAAATTT+TGG | + | chr5.4:77156427-77156446 | None:intergenic | 30.0% |
| ! | AGGATTTGAGTTATTCAGTT+CGG | - | chr5.4:77154685-77154704 | MS.gene020919:intron | 30.0% |
| ! | CTGTAATGTTTTATGCAGTT+TGG | - | chr5.4:77155236-77155255 | MS.gene020919:CDS | 30.0% |
| ! | CTTTACTTGATACTTGTTGA+TGG | - | chr5.4:77155208-77155227 | MS.gene020919:intron | 30.0% |
| ! | TACATTTTGCTCTATTGTCA+GGG | - | chr5.4:77156508-77156527 | MS.gene020919:intron | 30.0% |
| ! | TCAATTTCATCTTTAGAAGG+AGG | + | chr5.4:77152190-77152209 | None:intergenic | 30.0% |
| ! | TCCAATTTTTCCTTGTTACT+TGG | - | chr5.4:77157608-77157627 | MS.gene020919:intron | 30.0% |
| ! | TCTGAAACATCGTTATCAAA+TGG | + | chr5.4:77152335-77152354 | None:intergenic | 30.0% |
| ! | TGGAAAGTGTACTATTACAA+TGG | - | chr5.4:77157183-77157202 | MS.gene020919:intron | 30.0% |
| ! | TGTATAAAAAGCGTAAACAC+TGG | - | chr5.4:77154097-77154116 | MS.gene020919:intron | 30.0% |
| ! | TTTTCTGATCATGAGTTTAC+TGG | + | chr5.4:77153734-77153753 | None:intergenic | 30.0% |
| !! | AAGAGATTTCCATTTGTTGT+TGG | + | chr5.4:77156773-77156792 | None:intergenic | 30.0% |
| !! | ATATCTACCTTCTAGTTTGT+GGG | - | chr5.4:77156456-77156475 | MS.gene020919:intron | 30.0% |
| !! | ATTTTTCTCTTTTAAGGGAC+TGG | - | chr5.4:77152683-77152702 | MS.gene020919:intron | 30.0% |
| !! | GTCTTTTTCACTCTCAAATA+AGG | - | chr5.4:77156216-77156235 | MS.gene020919:intron | 30.0% |
| !! | TGCTGATTCTGTAATTTGTT+TGG | - | chr5.4:77156892-77156911 | MS.gene020919:intron | 30.0% |
| !! | TGTTTTTCAGTTGCATTAGT+AGG | - | chr5.4:77154284-77154303 | MS.gene020919:intron | 30.0% |
| !!! | GGATTTTGATTAGTATTTGG+TGG | - | chr5.4:77156606-77156625 | MS.gene020919:intron | 30.0% |
| !!! | TTTTTTTGGTGTTTGTTAGG+GGG | - | chr5.4:77158640-77158659 | MS.gene020919:intron | 30.0% |
| AAACCATTAGGCTCCATTTA+GGG | + | chr5.4:77156299-77156318 | None:intergenic | 35.0% | |
| AAACTTTGCAGAAGGATGTA+AGG | - | chr5.4:77157791-77157810 | MS.gene020919:CDS | 35.0% | |
| AAAGGGGAAAAATGGGAAAA+AGG | - | chr5.4:77155780-77155799 | MS.gene020919:intron | 35.0% | |
| AAGCTCTTCACTTAAAGTCT+TGG | - | chr5.4:77152994-77153013 | MS.gene020919:intron | 35.0% | |
| AATGGATCATCACTCTGATA+AGG | - | chr5.4:77157201-77157220 | MS.gene020919:intron | 35.0% | |
| ACAAAATCACCGTAATGTGA+GGG | - | chr5.4:77156089-77156108 | MS.gene020919:CDS | 35.0% | |
| AGCTCTTCACTTAAAGTCTT+GGG | - | chr5.4:77152995-77153014 | MS.gene020919:intron | 35.0% | |
| AGGGAACACAAAAACTGTAT+TGG | - | chr5.4:77156108-77156127 | MS.gene020919:CDS | 35.0% | |
| AGTTGGAACCAAATAATGTG+GGG | + | chr5.4:77156018-77156037 | None:intergenic | 35.0% | |
| ATACATGAAAAGGATGGCAA+TGG | + | chr5.4:77153043-77153062 | None:intergenic | 35.0% | |
| ATCAAGGTCCCAAATTTCAA+TGG | + | chr5.4:77155630-77155649 | None:intergenic | 35.0% | |
| ATTAAACGGCTTATCCAAAC+AGG | - | chr5.4:77154595-77154614 | MS.gene020919:intron | 35.0% | |
| ATTCCGGAATGATGATATCA+TGG | + | chr5.4:77155119-77155138 | None:intergenic | 35.0% | |
| CAAACAACAACAGAATCAGT+TGG | + | chr5.4:77154898-77154917 | None:intergenic | 35.0% | |
| CAGATTCGGAATACATGAAA+AGG | + | chr5.4:77153053-77153072 | None:intergenic | 35.0% | |
| CATGGATAACTATGATGAAG+AGG | - | chr5.4:77153280-77153299 | MS.gene020919:intron | 35.0% | |
| CTGTAATGTAATACCAAACC+TGG | - | chr5.4:77153671-77153690 | MS.gene020919:intron | 35.0% | |
| GAAAATACGGGAAATTCAAC+AGG | - | chr5.4:77158856-77158875 | MS.gene020919:CDS | 35.0% | |
| GAACACAAAAACTGTATTGG+AGG | - | chr5.4:77156111-77156130 | MS.gene020919:CDS | 35.0% | |
| GAAGTTGGAACCAAATAATG+TGG | + | chr5.4:77156020-77156039 | None:intergenic | 35.0% | |
| GACTGGATCTATGGATAAAA+CGG | - | chr5.4:77158361-77158380 | MS.gene020919:intron | 35.0% | |
| GCAAAGAGAAAAGGAAAAAG+GGG | - | chr5.4:77155764-77155783 | MS.gene020919:intron | 35.0% | |
| GCCAAGTAACAAGGAAAAAT+TGG | + | chr5.4:77157612-77157631 | None:intergenic | 35.0% | |
| GGAACTCAAAAAATGGGAAA+AGG | + | chr5.4:77155996-77156015 | None:intergenic | 35.0% | |
| GGCAAAGAGAAAAGGAAAAA+GGG | - | chr5.4:77155763-77155782 | MS.gene020919:intron | 35.0% | |
| GTCAAACTCAAAAGATGTCA+AGG | + | chr5.4:77157085-77157104 | None:intergenic | 35.0% | |
| GTGGAATCTAATTGGTAAAG+AGG | - | chr5.4:77153774-77153793 | MS.gene020919:intron | 35.0% | |
| TAACAAAACCATGCAAGTGT+TGG | + | chr5.4:77154782-77154801 | None:intergenic | 35.0% | |
| TACTCCTTCAACTTGAATGT+GGG | - | chr5.4:77156047-77156066 | MS.gene020919:intron | 35.0% | |
| TAGTATGCAGCTACTCAATA+TGG | + | chr5.4:77156340-77156359 | None:intergenic | 35.0% | |
| TATGATGAAGAGGATGACAA+AGG | - | chr5.4:77153290-77153309 | MS.gene020919:intron | 35.0% | |
| TATTACATGTTTATCTGCCC+TGG | - | chr5.4:77155040-77155059 | MS.gene020919:intron | 35.0% | |
| TCACCATGATATCATCATTC+CGG | - | chr5.4:77155113-77155132 | MS.gene020919:intron | 35.0% | |
| TCTTTAGATGCAACAGAAGA+TGG | + | chr5.4:77158505-77158524 | None:intergenic | 35.0% | |
| TGCCACCTAAGAATATAATC+AGG | - | chr5.4:77154052-77154071 | MS.gene020919:CDS | 35.0% | |
| TGGCAAAGAGAAAAGGAAAA+AGG | - | chr5.4:77155762-77155781 | MS.gene020919:intron | 35.0% | |
| TGTAGAAAAGCCAAGTAACA+AGG | + | chr5.4:77157621-77157640 | None:intergenic | 35.0% | |
| TGTTGTTGCCCTATTTAACA+AGG | - | chr5.4:77155666-77155685 | MS.gene020919:intron | 35.0% | |
| TTAAACGGCTTATCCAAACA+GGG | - | chr5.4:77154596-77154615 | MS.gene020919:intron | 35.0% | |
| TTCGGAATACATGAAAAGGA+TGG | + | chr5.4:77153049-77153068 | None:intergenic | 35.0% | |
| ! | AAGAGCTTTTGAGCAGAAAA+TGG | + | chr5.4:77152982-77153001 | None:intergenic | 35.0% |
| ! | ACCTTTTTCTCCTCCTTTAA+GGG | + | chr5.4:77155172-77155191 | None:intergenic | 35.0% |
| ! | ATGTGGATTGAAAGACATCA+TGG | + | chr5.4:77157496-77157515 | None:intergenic | 35.0% |
| ! | CTTTTGTTCTCAGATTGATG+AGG | - | chr5.4:77155717-77155736 | MS.gene020919:intron | 35.0% |
| ! | GATTTGAGTTATTCAGTTCG+GGG | - | chr5.4:77154687-77154706 | MS.gene020919:intron | 35.0% |
| ! | GGAGTATGATTCTGAAGATA+TGG | - | chr5.4:77154855-77154874 | MS.gene020919:intron | 35.0% |
| ! | GGATTTGAGTTATTCAGTTC+GGG | - | chr5.4:77154686-77154705 | MS.gene020919:intron | 35.0% |
| ! | GGTCCTTCATAATTTTCTTG+TGG | + | chr5.4:77152918-77152937 | None:intergenic | 35.0% |
| ! | GTACATTTTGCTCTATTGTC+AGG | - | chr5.4:77156507-77156526 | MS.gene020919:intron | 35.0% |
| ! | TAAAAAGCGTAAACACTGGT+AGG | - | chr5.4:77154101-77154120 | MS.gene020919:intron | 35.0% |
| ! | TGTTGTTGGTAAATCTAGCT+TGG | + | chr5.4:77156759-77156778 | None:intergenic | 35.0% |
| ! | TTTTGTGTTCCCTCACATTA+CGG | + | chr5.4:77156101-77156120 | None:intergenic | 35.0% |
| !! | AAATTGTGACGGACCATAAT+GGG | + | chr5.4:77152728-77152747 | None:intergenic | 35.0% |
| !! | CATATCTACCTTCTAGTTTG+TGG | - | chr5.4:77156455-77156474 | MS.gene020919:intron | 35.0% |
| !! | GCCGTTTAATTTGTAGCTTA+TGG | + | chr5.4:77154585-77154604 | None:intergenic | 35.0% |
| !! | TAAATTGTGACGGACCATAA+TGG | + | chr5.4:77152729-77152748 | None:intergenic | 35.0% |
| !!! | ACACTTGCATGGTTTTGTTA+AGG | - | chr5.4:77154782-77154801 | MS.gene020919:intron | 35.0% |
| !!! | CGATCCAATGTTTTGATGTT+CGG | - | chr5.4:77158143-77158162 | MS.gene020919:intron | 35.0% |
| !!! | TCATCACTTTTTCCATTGGA+TGG | + | chr5.4:77153233-77153252 | None:intergenic | 35.0% |
| AACAGGAATCAACCTCAATC+CGG | - | chr5.4:77158873-77158892 | MS.gene020919:CDS | 40.0% | |
| AACCATTAGGCTCCATTTAG+GGG | + | chr5.4:77156298-77156317 | None:intergenic | 40.0% | |
| AATACCACCCACAAACTAGA+AGG | + | chr5.4:77156466-77156485 | None:intergenic | 40.0% | |
| AATTTCCACTTTGCACAGCA+TGG | - | chr5.4:77155136-77155155 | MS.gene020919:intron | 40.0% | |
| AATTTCGTGGATTCCGAAAG+GGG | - | chr5.4:77152135-77152154 | MS.gene020919:CDS | 40.0% | |
| ACTCCTTCAACTTGAATGTG+GGG | - | chr5.4:77156048-77156067 | MS.gene020919:intron | 40.0% | |
| ACTGTATTGGAGGAGGATTT+AGG | - | chr5.4:77156121-77156140 | MS.gene020919:CDS | 40.0% | |
| AGAAGGAGGTTCAGCAAAAA+CGG | + | chr5.4:77152176-77152195 | None:intergenic | 40.0% | |
| AGGTCCCAAATTTCAATGGA+TGG | + | chr5.4:77155626-77155645 | None:intergenic | 40.0% | |
| AGTGAAGACTTATCGAGTCA+GGG | + | chr5.4:77156534-77156553 | None:intergenic | 40.0% | |
| ATAGATGCCATATGCATGTG+AGG | - | chr5.4:77156639-77156658 | MS.gene020919:intron | 40.0% | |
| ATCCATGTTGAGATCCTTCA+AGG | + | chr5.4:77153267-77153286 | None:intergenic | 40.0% | |
| ATCTTCAAGACTCACCTAAC+AGG | + | chr5.4:77158119-77158138 | None:intergenic | 40.0% | |
| ATGTGGGGGAACTCAAAAAA+TGG | + | chr5.4:77156003-77156022 | None:intergenic | 40.0% | |
| ATTACGCCACTGGATAAAAC+CGG | + | chr5.4:77153375-77153394 | None:intergenic | 40.0% | |
| CAAACCATTAGGCTCCATTT+AGG | + | chr5.4:77156300-77156319 | None:intergenic | 40.0% | |
| CAAATTACAGAATCAGCACG+AGG | + | chr5.4:77156890-77156909 | None:intergenic | 40.0% | |
| CAATTTCGTGGATTCCGAAA+GGG | - | chr5.4:77152134-77152153 | MS.gene020919:CDS | 40.0% | |
| CACAAAAACTGTATTGGAGG+AGG | - | chr5.4:77156114-77156133 | MS.gene020919:CDS | 40.0% | |
| CACAAAATCACCGTAATGTG+AGG | - | chr5.4:77156088-77156107 | MS.gene020919:CDS | 40.0% | |
| CAGTCCGAACATCAAAACAT+TGG | + | chr5.4:77158150-77158169 | None:intergenic | 40.0% | |
| CTAAATGGAGCCTAATGGTT+TGG | - | chr5.4:77156298-77156317 | MS.gene020919:CDS | 40.0% | |
| CTCCAATAGCCAACAAGAAT+GGG | + | chr5.4:77158697-77158716 | None:intergenic | 40.0% | |
| GATAAGTTCCAACACTTGCA+TGG | - | chr5.4:77154771-77154790 | MS.gene020919:intron | 40.0% | |
| GATCAAACGAACCACTAAGA+AGG | + | chr5.4:77157567-77157586 | None:intergenic | 40.0% | |
| GCAATTGGTAAACCATCCAA+TGG | - | chr5.4:77153218-77153237 | MS.gene020919:intron | 40.0% | |
| GGATTGAAAGACATCATGGA+AGG | + | chr5.4:77157492-77157511 | None:intergenic | 40.0% | |
| GGGACCATCCATTGAAATTT+GGG | - | chr5.4:77155619-77155638 | MS.gene020919:intron | 40.0% | |
| GGGCCACAAGAAAATTATGA+AGG | - | chr5.4:77152912-77152931 | MS.gene020919:intron | 40.0% | |
| GTACTCCTTCAACTTGAATG+TGG | - | chr5.4:77156046-77156065 | MS.gene020919:intron | 40.0% | |
| GTTGGAACCAAATAATGTGG+GGG | + | chr5.4:77156017-77156036 | None:intergenic | 40.0% | |
| GTTGGTCGTCTATAACTGTT+GGG | - | chr5.4:77155953-77155972 | MS.gene020919:intron | 40.0% | |
| GTTTATGAGTTCAGCTACCT+TGG | - | chr5.4:77153621-77153640 | MS.gene020919:intron | 40.0% | |
| GTTTGATCATACTGTTGCCT+TGG | - | chr5.4:77157579-77157598 | MS.gene020919:intron | 40.0% | |
| TAAAGTCTTGGGTGAAGAGA+TGG | - | chr5.4:77153006-77153025 | MS.gene020919:intron | 40.0% | |
| TAATCACTTGTGAGGCTGTT+TGG | - | chr5.4:77153391-77153410 | MS.gene020919:intron | 40.0% | |
| TACCTAACTATGTACTCTGC+CGG | - | chr5.4:77153353-77153372 | MS.gene020919:intron | 40.0% | |
| TAGATGCAACAGAAGATGGT+TGG | + | chr5.4:77158501-77158520 | None:intergenic | 40.0% | |
| TAGATGCCATATGCATGTGA+GGG | - | chr5.4:77156640-77156659 | MS.gene020919:intron | 40.0% | |
| TATGGTAACAGGGAACTTCT+TGG | - | chr5.4:77155583-77155602 | MS.gene020919:intron | 40.0% | |
| TATGTGTAGTATCACATGCC+AGG | + | chr5.4:77153692-77153711 | None:intergenic | 40.0% | |
| TGACAAGCGAGTGAAGATTT+GGG | - | chr5.4:77157150-77157169 | MS.gene020919:intron | 40.0% | |
| TGCATGACACCATGTCAATA+GGG | + | chr5.4:77158332-77158351 | None:intergenic | 40.0% | |
| TGCCGTATTATAGGATACAG+AGG | + | chr5.4:77158239-77158258 | None:intergenic | 40.0% | |
| TGGGACCATCCATTGAAATT+TGG | - | chr5.4:77155618-77155637 | MS.gene020919:intron | 40.0% | |
| TGTACTTGGACTTGAGTGAA+TGG | + | chr5.4:77156492-77156511 | None:intergenic | 40.0% | |
| TGTGGGGGAACTCAAAAAAT+GGG | + | chr5.4:77156002-77156021 | None:intergenic | 40.0% | |
| TGTTAGGTGAGTCTTGAAGA+TGG | - | chr5.4:77158118-77158137 | MS.gene020919:intron | 40.0% | |
| TGTTGGTCGTCTATAACTGT+TGG | - | chr5.4:77155952-77155971 | MS.gene020919:intron | 40.0% | |
| TTAACCCTACCCTATTGACA+TGG | - | chr5.4:77158320-77158339 | MS.gene020919:intron | 40.0% | |
| TTCAATCCACATATCCTCAC+AGG | - | chr5.4:77157504-77157523 | MS.gene020919:intron | 40.0% | |
| TTGAGTTCCCCCACATTATT+TGG | - | chr5.4:77156007-77156026 | MS.gene020919:intron | 40.0% | |
| TTGCTTGGAACAAGGAATAC+AGG | - | chr5.4:77156970-77156989 | MS.gene020919:intron | 40.0% | |
| TTTACCAATTGCACCAGCTA+CGG | + | chr5.4:77153210-77153229 | None:intergenic | 40.0% | |
| TTTCGGAATCCACGAAATTG+CGG | + | chr5.4:77152134-77152153 | None:intergenic | 40.0% | |
| ! | AACCCATTCTTGTTGGCTAT+TGG | - | chr5.4:77158692-77158711 | MS.gene020919:intron | 40.0% |
| ! | AAGATTTGGGATGTTGTTGC+TGG | - | chr5.4:77157163-77157182 | MS.gene020919:intron | 40.0% |
| ! | AAGGCATCTCTCGAAAATAC+GGG | - | chr5.4:77158844-77158863 | MS.gene020919:CDS | 40.0% |
| ! | AGAGTTTTGCACCTAAACCA+AGG | + | chr5.4:77153641-77153660 | None:intergenic | 40.0% |
| ! | ATTAGGTGCTGCCGTATTAT+AGG | + | chr5.4:77158248-77158267 | None:intergenic | 40.0% |
| ! | CATAAGGTTTGTAGTGTTGG+AGG | + | chr5.4:77154505-77154524 | None:intergenic | 40.0% |
| ! | CCTTTTTCTCCTCCTTTAAG+GGG | + | chr5.4:77155171-77155190 | None:intergenic | 40.0% |
| ! | CTTTTCTATCTCCTTCTCAG+AGG | - | chr5.4:77158667-77158686 | MS.gene020919:intron | 40.0% |
| ! | GACCTTTTTCTCCTCCTTTA+AGG | + | chr5.4:77155173-77155192 | None:intergenic | 40.0% |
| ! | GGTGCAAAACTCTTTTCTGA+TGG | - | chr5.4:77153648-77153667 | MS.gene020919:intron | 40.0% |
| ! | GTTGGTAAATCTAGCTTGGA+AGG | + | chr5.4:77156755-77156774 | None:intergenic | 40.0% |
| ! | TTTGGTTACCTCTTTTGCTC+TGG | - | chr5.4:77155844-77155863 | MS.gene020919:CDS | 40.0% |
| ! | TTTTGTACGACTAAGGGTCA+AGG | + | chr5.4:77153880-77153899 | None:intergenic | 40.0% |
| !! | AAACCCCACATTCAAGTTGA+AGG | + | chr5.4:77156054-77156073 | None:intergenic | 40.0% |
| !! | ACATGTGCTGTTCTTTTGTG+TGG | - | chr5.4:77155906-77155925 | MS.gene020919:CDS | 40.0% |
| !! | CTTTTTCTCCTCCTTTAAGG+GGG | + | chr5.4:77155170-77155189 | None:intergenic | 40.0% |
| !! | GAAGGCATCTCTCGAAAATA+CGG | - | chr5.4:77158843-77158862 | MS.gene020919:CDS | 40.0% |
| !! | GTGCGTTATGGTTATTTCTG+AGG | - | chr5.4:77157901-77157920 | MS.gene020919:intron | 40.0% |
| !! | TTCTTGGCTGTTGGTTCAAT+GGG | - | chr5.4:77155599-77155618 | MS.gene020919:intron | 40.0% |
| !!! | CTTTTAAGGGACTGGCTTAT+TGG | - | chr5.4:77152691-77152710 | MS.gene020919:intron | 40.0% |
| AACCCCTAAATGGAGCCTAA+TGG | - | chr5.4:77156293-77156312 | MS.gene020919:CDS | 45.0% | |
| AACCGGCAGAGTACATAGTT+AGG | + | chr5.4:77153358-77153377 | None:intergenic | 45.0% | |
| ACACAACCCACCAAACCATT+AGG | + | chr5.4:77156311-77156330 | None:intergenic | 45.0% | |
| ACAGGAATCAACCTCAATCC+GGG | - | chr5.4:77158874-77158893 | MS.gene020919:CDS | 45.0% | |
| AGAGATGCCTTCGTCAGATA+AGG | + | chr5.4:77158835-77158854 | None:intergenic | 45.0% | |
| AGAGGACAACCCATTCTTGT+TGG | - | chr5.4:77158685-77158704 | MS.gene020919:intron | 45.0% | |
| AGTAGCATTCTGCACAGATG+TGG | + | chr5.4:77158185-77158204 | None:intergenic | 45.0% | |
| ATCTGCAGCATTCGGTATAC+AGG | + | chr5.4:77158414-77158433 | None:intergenic | 45.0% | |
| ATTCTGCACAGATGTGGCAT+TGG | + | chr5.4:77158179-77158198 | None:intergenic | 45.0% | |
| CAAGTGATTAACGGCCTGTT+CGG | + | chr5.4:77152578-77152597 | None:intergenic | 45.0% | |
| CAAGTTCATATCGCGGGTAT+TGG | + | chr5.4:77155088-77155107 | None:intergenic | 45.0% | |
| CATTGACCCTCACATGCATA+TGG | + | chr5.4:77156649-77156668 | None:intergenic | 45.0% | |
| CCCCTTAAAGGAGGAGAAAA+AGG | - | chr5.4:77155168-77155187 | MS.gene020919:intron | 45.0% | |
| CCCTCTGATGTAATCTGTCA+GGG | + | chr5.4:77152823-77152842 | None:intergenic | 45.0% | |
| CCCTGACAGATTACATCAGA+GGG | - | chr5.4:77152820-77152839 | MS.gene020919:CDS | 45.0% | |
| CCTCCAATAGCCAACAAGAA+TGG | + | chr5.4:77158698-77158717 | None:intergenic | 45.0% | |
| CTAAGAGTGAAGACCCAGTT+TGG | + | chr5.4:77152939-77152958 | None:intergenic | 45.0% | |
| CTGACAAGCGAGTGAAGATT+TGG | - | chr5.4:77157149-77157168 | MS.gene020919:intron | 45.0% | |
| CTGCATGACACCATGTCAAT+AGG | + | chr5.4:77158333-77158352 | None:intergenic | 45.0% | |
| CTTGAACCTGTGAGGATATG+TGG | + | chr5.4:77157513-77157532 | None:intergenic | 45.0% | |
| GAAGGAGGTTCAGCAAAAAC+GGG | + | chr5.4:77152175-77152194 | None:intergenic | 45.0% | |
| GACACCATGTCAATAGGGTA+GGG | + | chr5.4:77158327-77158346 | None:intergenic | 45.0% | |
| GAGTGAAGACTTATCGAGTC+AGG | + | chr5.4:77156535-77156554 | None:intergenic | 45.0% | |
| GAGTTATTCAGTTCGGGGAA+CGG | - | chr5.4:77154692-77154711 | MS.gene020919:intron | 45.0% | |
| GAGTTCAGCTACCTTGGTTT+AGG | - | chr5.4:77153627-77153646 | MS.gene020919:intron | 45.0% | |
| GAGTTCCAATCTGCAGCATT+CGG | + | chr5.4:77158422-77158441 | None:intergenic | 45.0% | |
| GCAATTTCGTGGATTCCGAA+AGG | - | chr5.4:77152133-77152152 | MS.gene020919:CDS | 45.0% | |
| GCACAACAGATCCTTCTTAG+TGG | - | chr5.4:77157553-77157572 | MS.gene020919:intron | 45.0% | |
| GCTGTGCAAAGTGGAAATTC+CGG | + | chr5.4:77155135-77155154 | None:intergenic | 45.0% | |
| GGGTCGAGAGTAAATTGTGA+CGG | + | chr5.4:77152739-77152758 | None:intergenic | 45.0% | |
| GGTTGAGTGAAGACCCATTA+TGG | - | chr5.4:77152712-77152731 | MS.gene020919:intron | 45.0% | |
| GTAGTATCACATGCCAGGTT+TGG | + | chr5.4:77153687-77153706 | None:intergenic | 45.0% | |
| GTATACCGAATGCTGCAGAT+TGG | - | chr5.4:77158414-77158433 | MS.gene020919:intron | 45.0% | |
| GTATTGGAGGAGGATTTAGG+AGG | - | chr5.4:77156124-77156143 | MS.gene020919:CDS | 45.0% | |
| TAGCTTGGAAGGCTTCTGTT+GGG | + | chr5.4:77156744-77156763 | None:intergenic | 45.0% | |
| TCAAGTATCCATACCTGCCA+GGG | + | chr5.4:77155060-77155079 | None:intergenic | 45.0% | |
| TCATCTCCAACACTCTCACT+AGG | - | chr5.4:77152215-77152234 | MS.gene020919:intron | 45.0% | |
| TCCCTCTGATGTAATCTGTC+AGG | + | chr5.4:77152824-77152843 | None:intergenic | 45.0% | |
| TCCCTGACAGATTACATCAG+AGG | - | chr5.4:77152819-77152838 | MS.gene020919:CDS | 45.0% | |
| TCTGCTTTCGAAACCCCTTT+CGG | + | chr5.4:77152151-77152170 | None:intergenic | 45.0% | |
| TGACACCATGTCAATAGGGT+AGG | + | chr5.4:77158328-77158347 | None:intergenic | 45.0% | |
| TGATAAACCAAGGCCCTGTT+TGG | + | chr5.4:77154612-77154631 | None:intergenic | 45.0% | |
| TGATATTACCGACGCCTTGA+AGG | - | chr5.4:77153250-77153269 | MS.gene020919:intron | 45.0% | |
| TGATGTAGAGAGCTTGGCAT+GGG | - | chr5.4:77157852-77157871 | MS.gene020919:CDS | 45.0% | |
| TGTTGGGTGGCAAAGAGAAA+AGG | - | chr5.4:77155755-77155774 | MS.gene020919:intron | 45.0% | |
| TTAACCGTAGCTGGTGCAAT+TGG | - | chr5.4:77153203-77153222 | MS.gene020919:CDS | 45.0% | |
| TTGGCTATTGGAGGCTCAAA+GGG | - | chr5.4:77158704-77158723 | MS.gene020919:intron | 45.0% | |
| ! | AAGGAGTACGACTTGGAAGT+TGG | + | chr5.4:77156035-77156054 | None:intergenic | 45.0% |
| ! | AATGGAGCCTAATGGTTTGG+TGG | - | chr5.4:77156301-77156320 | MS.gene020919:CDS | 45.0% |
| ! | ACACACTGAGCACTCTTTTG+TGG | - | chr5.4:77157879-77157898 | MS.gene020919:intron | 45.0% |
| ! | AGCAGATGACCTTTGACTTC+AGG | - | chr5.4:77158749-77158768 | MS.gene020919:intron | 45.0% |
| ! | CAAGTTGAAGGAGTACGACT+TGG | + | chr5.4:77156042-77156061 | None:intergenic | 45.0% |
| ! | CACTCTTTTGTGGTGCGTTA+TGG | - | chr5.4:77157889-77157908 | MS.gene020919:intron | 45.0% |
| ! | CCATTCTTGTTGGCTATTGG+AGG | - | chr5.4:77158695-77158714 | MS.gene020919:intron | 45.0% |
| ! | GATGTACCTAGTGAGAGTGT+TGG | + | chr5.4:77152224-77152243 | None:intergenic | 45.0% |
| !! | ACAAAAGAGTGCTCAGTGTG+TGG | + | chr5.4:77157880-77157899 | None:intergenic | 45.0% |
| !! | ACTCAGTACTTGGTCTTGCT+TGG | - | chr5.4:77156955-77156974 | MS.gene020919:intron | 45.0% |
| !! | ACTTGGTCTTGCTTGGAACA+AGG | - | chr5.4:77156962-77156981 | MS.gene020919:intron | 45.0% |
| !! | AGCAAGACCAAGTACTGAGT+CGG | + | chr5.4:77156955-77156974 | None:intergenic | 45.0% |
| !! | ATGATGCAAAGGCATCAAGC+AGG | + | chr5.4:77155539-77155558 | None:intergenic | 45.0% |
| !! | ATGGAGCCTAATGGTTTGGT+GGG | - | chr5.4:77156302-77156321 | MS.gene020919:CDS | 45.0% |
| !! | CTTCTTGGCTGTTGGTTCAA+TGG | - | chr5.4:77155598-77155617 | MS.gene020919:intron | 45.0% |
| !! | TAATGGTTTGGTGGGTTGTG+TGG | - | chr5.4:77156310-77156329 | MS.gene020919:CDS | 45.0% |
| !! | TCTACCTTCTAGTTTGTGGG+TGG | - | chr5.4:77156459-77156478 | MS.gene020919:intron | 45.0% |
| !! | TATATAAAAAAAAATTCATA+AGG | + | chr5.4:77154521-77154540 | None:intergenic | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTT+TGG | - | chr5.4:77158626-77158645 | MS.gene020919:intron | 5.0% |
| !!! | TTTATTTTTTAAAATCTAAA+AGG | + | chr5.4:77156817-77156836 | None:intergenic | 5.0% |
| ACAGGGAACTTCTTGGCTGT+TGG | - | chr5.4:77155590-77155609 | MS.gene020919:intron | 50.0% | |
| ACATGTTTATCTGCCCTGGC+AGG | - | chr5.4:77155044-77155063 | MS.gene020919:intron | 50.0% | |
| AGCAACTGCTTGAACCTGTG+AGG | + | chr5.4:77157521-77157540 | None:intergenic | 50.0% | |
| CACAGGTTCAAGCAGTTGCT+TGG | - | chr5.4:77157521-77157540 | MS.gene020919:intron | 50.0% | |
| CACGTATAGCCAGAATGCGA+CGG | + | chr5.4:77157820-77157839 | None:intergenic | 50.0% | |
| CAGCAGCGCCAAGTGATTAA+CGG | + | chr5.4:77152587-77152606 | None:intergenic | 50.0% | |
| CAGCGAATCCAGAGCAAAAG+AGG | + | chr5.4:77155855-77155874 | None:intergenic | 50.0% | |
| CAGGAATCAACCTCAATCCG+GGG | - | chr5.4:77158875-77158894 | MS.gene020919:CDS | 50.0% | |
| CAGTGGCGTAATCACTTGTG+AGG | - | chr5.4:77153383-77153402 | MS.gene020919:intron | 50.0% | |
| CCTTCTCCTTACCAACACTC+TGG | - | chr5.4:77154446-77154465 | MS.gene020919:intron | 50.0% | |
| CGAACAGGCCGTTAATCACT+TGG | - | chr5.4:77152576-77152595 | MS.gene020919:intron | 50.0% | |
| CGCCTTGAAGGATCTCAACA+TGG | - | chr5.4:77153262-77153281 | MS.gene020919:intron | 50.0% | |
| CTAACGAGGGGAAGTTAGTG+TGG | + | chr5.4:77158000-77158019 | None:intergenic | 50.0% | |
| CTAGCTTGGAAGGCTTCTGT+TGG | + | chr5.4:77156745-77156764 | None:intergenic | 50.0% | |
| CTCAAGTATCCATACCTGCC+AGG | + | chr5.4:77155061-77155080 | None:intergenic | 50.0% | |
| CTCACAAGTGATTACGCCAC+TGG | + | chr5.4:77153385-77153404 | None:intergenic | 50.0% | |
| CTGATGTAGAGAGCTTGGCA+TGG | - | chr5.4:77157851-77157870 | MS.gene020919:CDS | 50.0% | |
| CTGGCAGGTATGGATACTTG+AGG | - | chr5.4:77155059-77155078 | MS.gene020919:intron | 50.0% | |
| CTTAGACTTGCAAGCGAAGC+TGG | - | chr5.4:77153808-77153827 | MS.gene020919:CDS | 50.0% | |
| CTTGATTGCCCCCTTAAAGG+AGG | - | chr5.4:77155159-77155178 | MS.gene020919:intron | 50.0% | |
| GATTAACGGCCTGTTCGGAT+TGG | + | chr5.4:77152573-77152592 | None:intergenic | 50.0% | |
| GCACATGCTTTAACCGTAGC+TGG | - | chr5.4:77153194-77153213 | MS.gene020919:CDS | 50.0% | |
| GCTTCTTGCGACTGGATCTA+TGG | - | chr5.4:77158352-77158371 | MS.gene020919:intron | 50.0% | |
| GTAGAGCCATGTGTGGTGTT+GGG | - | chr5.4:77155739-77155758 | MS.gene020919:intron | 50.0% | |
| GTTGAGATCCTTCAAGGCGT+CGG | + | chr5.4:77153261-77153280 | None:intergenic | 50.0% | |
| GTTGGCTATTGGAGGCTCAA+AGG | - | chr5.4:77158703-77158722 | MS.gene020919:intron | 50.0% | |
| TCAAGCCATGCTGTGCAAAG+TGG | + | chr5.4:77155144-77155163 | None:intergenic | 50.0% | |
| TGATGAGGTAGAGCCATGTG+TGG | - | chr5.4:77155732-77155751 | MS.gene020919:intron | 50.0% | |
| TGGCTTGATTGCCCCCTTAA+AGG | - | chr5.4:77155156-77155175 | MS.gene020919:intron | 50.0% | |
| TGGGACACCTTATCTGACGA+AGG | - | chr5.4:77158825-77158844 | MS.gene020919:CDS | 50.0% | |
| TTTATCTGCCCTGGCAGGTA+TGG | - | chr5.4:77155049-77155068 | MS.gene020919:intron | 50.0% | |
| ! | AAGGTGATGGTCCAGAGTGT+TGG | + | chr5.4:77154460-77154479 | None:intergenic | 50.0% |
| ! | GCATTCTGGCTATACGTGGT+CGG | - | chr5.4:77157822-77157841 | MS.gene020919:CDS | 50.0% |
| ! | TGTTGTTTGTGCGCGTACTG+AGG | - | chr5.4:77154909-77154928 | MS.gene020919:intron | 50.0% |
| !! | AGTCACACCGACTCAGTACT+TGG | - | chr5.4:77156945-77156964 | MS.gene020919:intron | 50.0% |
| !! | CCAGAGTGTTGGTAAGGAGA+AGG | + | chr5.4:77154449-77154468 | None:intergenic | 50.0% |
| !! | GAATGGGTTGTCCTCTGAGA+AGG | + | chr5.4:77158681-77158700 | None:intergenic | 50.0% |
| !! | GATGGTCCAGAGTGTTGGTA+AGG | + | chr5.4:77154455-77154474 | None:intergenic | 50.0% |
| !!! | ACTCTGCCGGTTTTATCCAG+TGG | - | chr5.4:77153366-77153385 | MS.gene020919:intron | 50.0% |
| ATTTAGGGGTTGCGAGGGGA+AGG | + | chr5.4:77156284-77156303 | None:intergenic | 55.0% | |
| CACTCTGGACCATCACCTTC+TGG | - | chr5.4:77154461-77154480 | MS.gene020919:intron | 55.0% | |
| CTCCATTTAGGGGTTGCGAG+GGG | + | chr5.4:77156288-77156307 | None:intergenic | 55.0% | |
| CTGGACCATCACCTTCTGGT+GGG | - | chr5.4:77154465-77154484 | MS.gene020919:intron | 55.0% | |
| GCTCCATTTAGGGGTTGCGA+GGG | + | chr5.4:77156289-77156308 | None:intergenic | 55.0% | |
| GGCTTATCCAAACAGGGCCT+TGG | - | chr5.4:77154602-77154621 | MS.gene020919:intron | 55.0% | |
| GGTAGAGCCATGTGTGGTGT+TGG | - | chr5.4:77155738-77155757 | MS.gene020919:intron | 55.0% | |
| GTCATGCAGCTTCTTGCGAC+TGG | - | chr5.4:77158344-77158363 | MS.gene020919:intron | 55.0% | |
| TCTGGACCATCACCTTCTGG+TGG | - | chr5.4:77154464-77154483 | MS.gene020919:intron | 55.0% | |
| TGATGCCCACCAGAAGGTGA+TGG | + | chr5.4:77154473-77154492 | None:intergenic | 55.0% | |
| TTCCCCTCGCAACCCCTAAA+TGG | - | chr5.4:77156283-77156302 | MS.gene020919:CDS | 55.0% | |
| TTGCCACCCAACACCACACA+TGG | + | chr5.4:77155748-77155767 | None:intergenic | 55.0% | |
| TTTAGGGGTTGCGAGGGGAA+GGG | + | chr5.4:77156283-77156302 | None:intergenic | 55.0% | |
| ! | CGTCGCATTCTGGCTATACG+TGG | - | chr5.4:77157818-77157837 | MS.gene020919:CDS | 55.0% |
| !! | CAGCGCTGATGTAGAGAGCT+TGG | - | chr5.4:77157846-77157865 | MS.gene020919:CDS | 55.0% |
| !! | GAGTACTGATGCCCACCAGA+AGG | + | chr5.4:77154479-77154498 | None:intergenic | 55.0% |
| GGAAGGGAAGGGAGGGCTTT+GGG | + | chr5.4:77156267-77156286 | None:intergenic | 60.0% | |
| GGCTCCATTTAGGGGTTGCG+AGG | + | chr5.4:77156290-77156309 | None:intergenic | 60.0% | |
| GTAAGGACGCCGTCGCATTC+TGG | - | chr5.4:77157808-77157827 | MS.gene020919:CDS | 60.0% | |
| ! | GAGCCATGTGTGGTGTTGGG+TGG | - | chr5.4:77155742-77155761 | MS.gene020919:intron | 60.0% |
| !! | AAGGGAGGGCTTTGGGAGGA+AGG | + | chr5.4:77156260-77156279 | None:intergenic | 60.0% |
| !! | AGGGAGGGCTTTGGGAGGAA+GGG | + | chr5.4:77156259-77156278 | None:intergenic | 60.0% |
| GGGAAGGGAAGGGAGGGCTT+TGG | + | chr5.4:77156268-77156287 | None:intergenic | 65.0% | |
| GGGTTGCGAGGGGAAGGGAA+GGG | + | chr5.4:77156278-77156297 | None:intergenic | 65.0% | |
| TGCGAGGGGAAGGGAAGGGA+GGG | + | chr5.4:77156274-77156293 | None:intergenic | 65.0% | |
| TTGCGAGGGGAAGGGAAGGG+AGG | + | chr5.4:77156275-77156294 | None:intergenic | 65.0% | |
| !! | AGGGAAGGGAGGGCTTTGGG+AGG | + | chr5.4:77156264-77156283 | None:intergenic | 65.0% |
| GGGGTTGCGAGGGGAAGGGA+AGG | + | chr5.4:77156279-77156298 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 77152124 | 77158902 | 77152124 | ID=MS.gene020919 |
| chr5.4 | mRNA | 77152124 | 77158902 | 77152124 | ID=MS.gene020919.t1;Parent=MS.gene020919 |
| chr5.4 | exon | 77158790 | 77158902 | 77158790 | ID=MS.gene020919.t1.exon1;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77158790 | 77158902 | 77158790 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77157715 | 77157887 | 77157715 | ID=MS.gene020919.t1.exon2;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77157715 | 77157887 | 77157715 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77156260 | 77156339 | 77156260 | ID=MS.gene020919.t1.exon3;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77156260 | 77156339 | 77156260 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77156075 | 77156173 | 77156075 | ID=MS.gene020919.t1.exon4;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77156075 | 77156173 | 77156075 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77155837 | 77155960 | 77155837 | ID=MS.gene020919.t1.exon5;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77155837 | 77155960 | 77155837 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77155374 | 77155432 | 77155374 | ID=MS.gene020919.t1.exon6;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77155374 | 77155432 | 77155374 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77155225 | 77155296 | 77155225 | ID=MS.gene020919.t1.exon7;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77155225 | 77155296 | 77155225 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77154035 | 77154105 | 77154035 | ID=MS.gene020919.t1.exon8;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77154035 | 77154105 | 77154035 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77153804 | 77153900 | 77153804 | ID=MS.gene020919.t1.exon9;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77153804 | 77153900 | 77153804 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77153426 | 77153500 | 77153426 | ID=MS.gene020919.t1.exon10;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77153426 | 77153500 | 77153426 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77153126 | 77153224 | 77153126 | ID=MS.gene020919.t1.exon11;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77153126 | 77153224 | 77153126 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77152759 | 77152902 | 77152759 | ID=MS.gene020919.t1.exon12;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77152759 | 77152902 | 77152759 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77152644 | 77152673 | 77152644 | ID=MS.gene020919.t1.exon13;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77152644 | 77152673 | 77152644 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77152492 | 77152554 | 77152492 | ID=MS.gene020919.t1.exon14;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77152492 | 77152554 | 77152492 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77152290 | 77152367 | 77152290 | ID=MS.gene020919.t1.exon15;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77152290 | 77152367 | 77152290 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| chr5.4 | exon | 77152124 | 77152204 | 77152124 | ID=MS.gene020919.t1.exon16;Parent=MS.gene020919.t1 |
| chr5.4 | CDS | 77152124 | 77152204 | 77152124 | ID=cds.MS.gene020919.t1;Parent=MS.gene020919.t1 |
| Gene Sequence |
| Protein sequence |
