Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38190.t1 | KEH28480.1 | 95.9 | 493 | 19 | 1 | 1 | 492 | 1 | 493 | 5.10E-211 | 743.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38190.t1 | Q8W034 | 57.2 | 194 | 77 | 2 | 1 | 189 | 1 | 193 | 5.2e-63 | 243.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38190.t1 | A0A072URI5 | 95.9 | 493 | 19 | 1 | 1 | 492 | 1 | 493 | 3.7e-211 | 743.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene38190 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene050085 | MS.gene38190 | 0.807414 | 5.11E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene38190 | 0.811133 | 8.15E-51 | -1.69E-46 |
| MS.gene051654 | MS.gene38190 | 0.80486 | 1.76E-49 | -1.69E-46 |
| MS.gene056097 | MS.gene38190 | 0.824805 | 6.62E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene38190 | 0.811884 | 5.60E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene38190 | 0.821966 | 3.05E-53 | -1.69E-46 |
| MS.gene058639 | MS.gene38190 | 0.806638 | 7.46E-50 | -1.69E-46 |
| MS.gene05880 | MS.gene38190 | 0.841237 | 5.37E-58 | -1.69E-46 |
| MS.gene060563 | MS.gene38190 | 0.836384 | 9.66E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020919 | MS.gene38190 | PPI |
| MS.gene91980 | MS.gene38190 | PPI |
| MS.gene006974 | MS.gene38190 | PPI |
| MS.gene38176 | MS.gene38190 | PPI |
| MS.gene38091 | MS.gene38190 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38190.t1 | MTR_5g097580 | 98.174 | 493 | 8 | 1 | 1 | 492 | 1 | 493 | 0.0 | 952 |
| MS.gene38190.t1 | MTR_5g097580 | 98.109 | 476 | 8 | 1 | 1 | 475 | 1 | 476 | 0.0 | 919 |
| MS.gene38190.t1 | MTR_3g055990 | 63.825 | 481 | 165 | 7 | 1 | 475 | 1 | 478 | 0.0 | 582 |
| MS.gene38190.t1 | MTR_3g055990 | 63.825 | 481 | 165 | 7 | 1 | 475 | 1 | 478 | 0.0 | 582 |
| MS.gene38190.t1 | MTR_2g026180 | 58.038 | 479 | 192 | 7 | 4 | 475 | 2 | 478 | 1.32e-176 | 505 |
| MS.gene38190.t1 | MTR_2g026180 | 54.279 | 409 | 178 | 7 | 74 | 475 | 2 | 408 | 8.67e-131 | 385 |
| MS.gene38190.t1 | MTR_2g026180 | 37.975 | 79 | 48 | 1 | 7 | 84 | 37 | 115 | 1.83e-14 | 75.5 |
| MS.gene38190.t1 | MTR_1g073690 | 59.487 | 195 | 73 | 1 | 1 | 189 | 1 | 195 | 2.01e-77 | 250 |
| MS.gene38190.t1 | MTR_3g103420 | 50.777 | 193 | 86 | 2 | 1 | 185 | 5 | 196 | 1.42e-55 | 190 |
| MS.gene38190.t1 | MTR_6g004810 | 42.932 | 191 | 92 | 3 | 6 | 193 | 45 | 221 | 3.20e-46 | 165 |
| MS.gene38190.t1 | MTR_3g082650 | 41.989 | 181 | 92 | 3 | 6 | 185 | 18 | 186 | 6.69e-43 | 155 |
| MS.gene38190.t1 | MTR_5g017280 | 37.234 | 188 | 105 | 2 | 4 | 191 | 2 | 176 | 1.76e-35 | 136 |
| MS.gene38190.t1 | MTR_5g017280 | 28.095 | 210 | 117 | 3 | 7 | 183 | 93 | 301 | 6.93e-19 | 88.6 |
| MS.gene38190.t1 | MTR_5g017280 | 37.234 | 188 | 105 | 2 | 4 | 191 | 2 | 176 | 2.96e-35 | 136 |
| MS.gene38190.t1 | MTR_5g017280 | 28.095 | 210 | 117 | 3 | 7 | 183 | 93 | 301 | 8.26e-19 | 88.6 |
| MS.gene38190.t1 | MTR_4g088010 | 30.672 | 238 | 141 | 6 | 7 | 238 | 77 | 296 | 2.12e-20 | 92.8 |
| MS.gene38190.t1 | MTR_8g463890 | 30.508 | 177 | 113 | 3 | 7 | 182 | 74 | 241 | 2.16e-20 | 94.0 |
| MS.gene38190.t1 | MTR_4g104470 | 29.730 | 185 | 107 | 4 | 3 | 178 | 119 | 289 | 3.11e-16 | 79.7 |
| MS.gene38190.t1 | MTR_3g092490 | 41.250 | 80 | 46 | 1 | 7 | 85 | 27 | 106 | 5.21e-16 | 76.3 |
| MS.gene38190.t1 | MTR_7g013730 | 49.383 | 81 | 39 | 1 | 5 | 83 | 39 | 119 | 8.08e-16 | 77.8 |
| MS.gene38190.t1 | MTR_8g024520 | 36.885 | 122 | 71 | 3 | 7 | 125 | 26 | 144 | 1.20e-15 | 77.8 |
| MS.gene38190.t1 | MTR_8g024520 | 36.885 | 122 | 71 | 3 | 7 | 125 | 26 | 144 | 1.24e-15 | 77.8 |
| MS.gene38190.t1 | MTR_3g092490 | 39.759 | 83 | 49 | 1 | 7 | 88 | 27 | 109 | 1.71e-15 | 76.6 |
| MS.gene38190.t1 | MTR_3g092490 | 39.759 | 83 | 49 | 1 | 7 | 88 | 27 | 109 | 1.75e-15 | 76.6 |
| MS.gene38190.t1 | MTR_5g088220 | 25.397 | 189 | 111 | 3 | 7 | 182 | 166 | 337 | 2.39e-15 | 79.0 |
| MS.gene38190.t1 | MTR_4g035310 | 41.333 | 75 | 43 | 1 | 7 | 80 | 17 | 91 | 5.28e-15 | 75.5 |
| MS.gene38190.t1 | MTR_4g035310 | 41.333 | 75 | 43 | 1 | 7 | 80 | 17 | 91 | 5.93e-15 | 75.5 |
| MS.gene38190.t1 | MTR_4g109540 | 48.101 | 79 | 39 | 1 | 7 | 83 | 43 | 121 | 8.72e-15 | 74.7 |
| MS.gene38190.t1 | MTR_3g116130 | 41.333 | 75 | 43 | 1 | 7 | 80 | 30 | 104 | 1.48e-14 | 74.3 |
| MS.gene38190.t1 | MTR_7g088140 | 25.926 | 189 | 134 | 4 | 7 | 192 | 128 | 313 | 3.50e-14 | 75.1 |
| MS.gene38190.t1 | MTR_3g075500 | 30.939 | 181 | 117 | 3 | 4 | 181 | 107 | 282 | 5.39e-14 | 72.8 |
| MS.gene38190.t1 | MTR_7g088140 | 25.926 | 189 | 134 | 4 | 7 | 192 | 128 | 313 | 9.41e-14 | 73.9 |
| MS.gene38190.t1 | MTR_3g116130 | 41.333 | 75 | 43 | 1 | 7 | 80 | 30 | 104 | 9.84e-14 | 73.2 |
| MS.gene38190.t1 | MTR_1g064230 | 29.474 | 190 | 117 | 6 | 7 | 181 | 85 | 272 | 1.12e-13 | 71.6 |
| MS.gene38190.t1 | MTR_3g075500 | 30.675 | 163 | 106 | 2 | 4 | 164 | 107 | 264 | 1.28e-13 | 71.6 |
| MS.gene38190.t1 | MTR_5g064120 | 42.647 | 68 | 38 | 1 | 7 | 73 | 17 | 84 | 1.48e-13 | 71.6 |
| MS.gene38190.t1 | MTR_7g117495 | 46.667 | 60 | 32 | 0 | 7 | 66 | 19 | 78 | 1.60e-13 | 70.9 |
| MS.gene38190.t1 | MTR_7g117495 | 46.667 | 60 | 32 | 0 | 7 | 66 | 19 | 78 | 1.90e-13 | 70.9 |
| MS.gene38190.t1 | MTR_3g084040 | 58.000 | 50 | 21 | 0 | 5 | 54 | 35 | 84 | 2.14e-13 | 66.6 |
| MS.gene38190.t1 | MTR_3g084040 | 41.250 | 80 | 46 | 1 | 5 | 83 | 35 | 114 | 3.02e-13 | 67.4 |
| MS.gene38190.t1 | MTR_3g025880 | 42.683 | 82 | 43 | 2 | 7 | 84 | 45 | 126 | 3.89e-13 | 71.6 |
| MS.gene38190.t1 | MTR_4g122650 | 26.066 | 211 | 106 | 5 | 6 | 194 | 88 | 270 | 4.46e-13 | 72.0 |
| MS.gene38190.t1 | MTR_1g020080 | 29.885 | 174 | 107 | 5 | 8 | 176 | 192 | 355 | 4.53e-13 | 71.2 |
| MS.gene38190.t1 | MTR_1g045510 | 28.333 | 180 | 111 | 4 | 7 | 181 | 114 | 280 | 8.42e-13 | 69.3 |
| MS.gene38190.t1 | MTR_7g107580 | 26.590 | 173 | 108 | 5 | 3 | 174 | 13 | 167 | 1.23e-12 | 69.7 |
| MS.gene38190.t1 | MTR_4g109540 | 44.828 | 87 | 38 | 2 | 7 | 83 | 43 | 129 | 1.69e-12 | 68.2 |
| MS.gene38190.t1 | MTR_4g131970 | 28.177 | 181 | 103 | 7 | 8 | 176 | 169 | 334 | 4.47e-12 | 68.2 |
| MS.gene38190.t1 | MTR_3g080130 | 54.167 | 48 | 22 | 0 | 7 | 54 | 37 | 84 | 5.01e-12 | 63.9 |
| MS.gene38190.t1 | MTR_4g070140 | 36.842 | 76 | 46 | 1 | 7 | 80 | 9 | 84 | 5.63e-12 | 65.1 |
| MS.gene38190.t1 | MTR_3g065190 | 32.075 | 159 | 90 | 4 | 9 | 164 | 28 | 171 | 6.69e-12 | 67.4 |
| MS.gene38190.t1 | MTR_4g086600 | 28.788 | 198 | 115 | 7 | 8 | 192 | 118 | 302 | 7.84e-12 | 67.8 |
| MS.gene38190.t1 | MTR_4g070190 | 39.474 | 76 | 44 | 1 | 7 | 80 | 9 | 84 | 1.27e-11 | 63.5 |
| MS.gene38190.t1 | MTR_6g040070 | 26.354 | 277 | 155 | 14 | 13 | 266 | 113 | 363 | 1.58e-11 | 67.4 |
| MS.gene38190.t1 | MTR_7g013740 | 41.975 | 81 | 45 | 1 | 5 | 83 | 39 | 119 | 2.25e-11 | 62.4 |
| MS.gene38190.t1 | MTR_3g014000 | 50.820 | 61 | 26 | 1 | 5 | 65 | 33 | 89 | 2.57e-11 | 61.6 |
| MS.gene38190.t1 | MTR_7g118120 | 27.632 | 152 | 84 | 5 | 7 | 154 | 105 | 234 | 2.73e-11 | 65.9 |
| MS.gene38190.t1 | MTR_4g070080 | 38.158 | 76 | 45 | 1 | 7 | 80 | 7 | 82 | 4.51e-11 | 60.8 |
| MS.gene38190.t1 | MTR_4g070080 | 38.158 | 76 | 45 | 1 | 7 | 80 | 7 | 82 | 6.58e-11 | 61.2 |
| MS.gene38190.t1 | MTR_2g096560 | 36.905 | 84 | 44 | 2 | 107 | 185 | 8 | 87 | 9.11e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38190.t1 | AT3G07810 | 64.185 | 497 | 152 | 12 | 1 | 476 | 1 | 492 | 0.0 | 550 |
| MS.gene38190.t1 | AT3G07810 | 64.315 | 496 | 151 | 12 | 1 | 475 | 1 | 491 | 0.0 | 550 |
| MS.gene38190.t1 | AT5G47620 | 47.917 | 480 | 193 | 9 | 1 | 475 | 1 | 428 | 1.88e-133 | 393 |
| MS.gene38190.t1 | AT5G47620 | 47.917 | 480 | 193 | 9 | 1 | 475 | 1 | 428 | 1.88e-133 | 393 |
| MS.gene38190.t1 | AT5G47620 | 47.917 | 480 | 193 | 9 | 1 | 475 | 1 | 428 | 1.88e-133 | 393 |
| MS.gene38190.t1 | AT4G26650 | 51.807 | 498 | 158 | 20 | 3 | 475 | 9 | 449 | 3.62e-132 | 390 |
| MS.gene38190.t1 | AT4G26650 | 51.807 | 498 | 158 | 20 | 3 | 475 | 12 | 452 | 5.13e-132 | 390 |
| MS.gene38190.t1 | AT5G47620 | 45.817 | 502 | 193 | 10 | 1 | 475 | 1 | 450 | 1.87e-128 | 381 |
| MS.gene38190.t1 | AT5G55550 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.90e-120 | 361 |
| MS.gene38190.t1 | AT5G55550 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.90e-120 | 361 |
| MS.gene38190.t1 | AT5G55550 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.90e-120 | 361 |
| MS.gene38190.t1 | AT5G55550 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.90e-120 | 361 |
| MS.gene38190.t1 | AT5G55550 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.56e-119 | 358 |
| MS.gene38190.t1 | AT5G55550 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.56e-119 | 358 |
| MS.gene38190.t1 | AT5G55550 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.56e-119 | 358 |
| MS.gene38190.t1 | AT5G55550 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.56e-119 | 358 |
| MS.gene38190.t1 | AT5G55550 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.56e-119 | 358 |
| MS.gene38190.t1 | AT5G55550 | 44.685 | 555 | 188 | 22 | 1 | 487 | 1 | 504 | 6.09e-112 | 340 |
| MS.gene38190.t1 | AT5G55550 | 45.304 | 543 | 178 | 22 | 1 | 475 | 1 | 492 | 4.13e-111 | 338 |
| MS.gene38190.t1 | AT5G47620 | 43.980 | 407 | 171 | 9 | 74 | 475 | 14 | 368 | 4.11e-92 | 285 |
| MS.gene38190.t1 | AT5G47620 | 39.759 | 83 | 49 | 1 | 3 | 84 | 43 | 125 | 2.50e-15 | 78.2 |
| MS.gene38190.t1 | AT4G14300 | 56.995 | 193 | 77 | 2 | 1 | 188 | 1 | 192 | 1.78e-75 | 243 |
| MS.gene38190.t1 | AT4G14300 | 56.995 | 193 | 77 | 2 | 1 | 188 | 1 | 192 | 1.78e-75 | 243 |
| MS.gene38190.t1 | AT2G33410 | 55.959 | 193 | 79 | 2 | 1 | 188 | 1 | 192 | 4.10e-71 | 232 |
| MS.gene38190.t1 | AT1G58470 | 47.236 | 199 | 91 | 2 | 1 | 185 | 1 | 199 | 6.12e-52 | 180 |
| MS.gene38190.t1 | AT1G58470 | 47.236 | 199 | 91 | 2 | 1 | 185 | 1 | 199 | 6.12e-52 | 180 |
| MS.gene38190.t1 | AT1G17640 | 47.222 | 180 | 85 | 2 | 6 | 184 | 66 | 236 | 3.60e-48 | 170 |
| MS.gene38190.t1 | AT1G17640 | 47.222 | 180 | 85 | 2 | 6 | 184 | 66 | 236 | 3.60e-48 | 170 |
| MS.gene38190.t1 | AT1G17640 | 47.222 | 180 | 85 | 2 | 6 | 184 | 66 | 236 | 3.60e-48 | 170 |
| MS.gene38190.t1 | AT3G13224 | 42.541 | 181 | 93 | 2 | 6 | 185 | 19 | 189 | 3.32e-45 | 162 |
| MS.gene38190.t1 | AT3G13224 | 42.222 | 180 | 93 | 2 | 7 | 185 | 11 | 180 | 4.69e-44 | 159 |
| MS.gene38190.t1 | AT3G13224 | 51.250 | 80 | 38 | 1 | 105 | 184 | 9 | 87 | 6.32e-19 | 88.6 |
| MS.gene38190.t1 | AT5G40490 | 43.350 | 203 | 98 | 5 | 5 | 206 | 41 | 227 | 7.61e-44 | 160 |
| MS.gene38190.t1 | AT3G13224 | 44.099 | 161 | 80 | 1 | 6 | 166 | 19 | 169 | 4.05e-41 | 147 |
| MS.gene38190.t1 | AT3G13224 | 49.425 | 87 | 38 | 2 | 98 | 184 | 16 | 96 | 8.89e-18 | 82.8 |
| MS.gene38190.t1 | AT5G40490 | 44.565 | 184 | 85 | 5 | 24 | 206 | 43 | 210 | 9.64e-39 | 145 |
| MS.gene38190.t1 | AT5G40490 | 36.275 | 102 | 62 | 2 | 85 | 184 | 2 | 102 | 3.03e-13 | 72.0 |
| MS.gene38190.t1 | AT5G40490 | 38.372 | 86 | 51 | 1 | 5 | 88 | 112 | 197 | 1.19e-11 | 67.0 |
| MS.gene38190.t1 | AT4G36960 | 35.263 | 190 | 110 | 2 | 7 | 196 | 4 | 180 | 4.07e-36 | 138 |
| MS.gene38190.t1 | AT4G36960 | 35.263 | 190 | 110 | 2 | 7 | 196 | 4 | 180 | 4.07e-36 | 138 |
| MS.gene38190.t1 | AT2G41060 | 24.437 | 311 | 173 | 9 | 7 | 271 | 129 | 423 | 2.18e-19 | 90.9 |
| MS.gene38190.t1 | AT2G41060 | 24.437 | 311 | 173 | 9 | 7 | 271 | 129 | 423 | 2.18e-19 | 90.9 |
| MS.gene38190.t1 | AT2G41060 | 24.437 | 311 | 173 | 9 | 7 | 271 | 129 | 423 | 2.18e-19 | 90.9 |
| MS.gene38190.t1 | AT1G33470 | 34.615 | 156 | 80 | 6 | 7 | 157 | 8 | 146 | 2.01e-17 | 82.0 |
| MS.gene38190.t1 | AT1G33470 | 34.615 | 156 | 80 | 6 | 7 | 157 | 8 | 146 | 2.02e-17 | 82.4 |
| MS.gene38190.t1 | AT1G33470 | 34.615 | 156 | 80 | 6 | 7 | 157 | 8 | 146 | 2.20e-17 | 82.0 |
| MS.gene38190.t1 | AT3G15010 | 28.571 | 182 | 110 | 3 | 7 | 182 | 76 | 243 | 2.42e-17 | 84.3 |
| MS.gene38190.t1 | AT3G15010 | 28.571 | 182 | 110 | 3 | 7 | 182 | 76 | 243 | 2.42e-17 | 84.3 |
| MS.gene38190.t1 | AT4G16280 | 30.542 | 203 | 111 | 6 | 2 | 192 | 116 | 300 | 3.24e-17 | 85.1 |
| MS.gene38190.t1 | AT4G16280 | 30.542 | 203 | 111 | 6 | 2 | 192 | 41 | 225 | 3.37e-17 | 85.1 |
| MS.gene38190.t1 | AT4G16280 | 30.542 | 203 | 111 | 6 | 2 | 192 | 116 | 300 | 4.11e-17 | 84.3 |
| MS.gene38190.t1 | AT4G24770 | 29.412 | 204 | 115 | 7 | 3 | 198 | 147 | 329 | 5.32e-16 | 79.7 |
| MS.gene38190.t1 | AT4G24770 | 29.412 | 204 | 115 | 7 | 3 | 198 | 147 | 329 | 5.32e-16 | 79.7 |
| MS.gene38190.t1 | AT1G76460 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 1.19e-15 | 77.8 |
| MS.gene38190.t1 | AT1G71770 | 28.525 | 305 | 154 | 16 | 8 | 268 | 241 | 525 | 1.21e-15 | 80.1 |
| MS.gene38190.t1 | AT1G71770 | 28.525 | 305 | 154 | 16 | 8 | 268 | 241 | 525 | 1.21e-15 | 80.1 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT3G56860 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.07e-15 | 79.0 |
| MS.gene38190.t1 | AT1G20880 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 2.34e-15 | 76.6 |
| MS.gene38190.t1 | AT1G20880 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 2.34e-15 | 76.6 |
| MS.gene38190.t1 | AT1G20880 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 2.34e-15 | 76.6 |
| MS.gene38190.t1 | AT3G52380 | 32.161 | 199 | 124 | 7 | 4 | 196 | 114 | 307 | 2.53e-15 | 77.4 |
| MS.gene38190.t1 | AT3G23830 | 41.975 | 81 | 45 | 1 | 5 | 83 | 34 | 114 | 2.56e-15 | 73.2 |
| MS.gene38190.t1 | AT3G23830 | 34.940 | 83 | 53 | 1 | 107 | 188 | 36 | 118 | 2.92e-11 | 61.6 |
| MS.gene38190.t1 | AT3G23830 | 41.975 | 81 | 45 | 1 | 5 | 83 | 34 | 114 | 2.56e-15 | 73.2 |
| MS.gene38190.t1 | AT3G23830 | 34.940 | 83 | 53 | 1 | 107 | 188 | 36 | 118 | 2.92e-11 | 61.6 |
| MS.gene38190.t1 | AT2G37220 | 28.421 | 190 | 120 | 5 | 7 | 181 | 92 | 280 | 1.95e-14 | 74.3 |
| MS.gene38190.t1 | AT4G00830 | 28.649 | 185 | 103 | 6 | 7 | 184 | 117 | 279 | 1.96e-14 | 75.9 |
| MS.gene38190.t1 | AT4G00830 | 28.649 | 185 | 103 | 6 | 7 | 184 | 117 | 279 | 1.96e-14 | 75.9 |
| MS.gene38190.t1 | AT4G00830 | 28.649 | 185 | 103 | 6 | 7 | 184 | 117 | 279 | 1.96e-14 | 75.9 |
| MS.gene38190.t1 | AT4G39260 | 39.241 | 79 | 46 | 1 | 7 | 83 | 7 | 85 | 4.90e-14 | 68.2 |
| MS.gene38190.t1 | AT4G39260 | 35.443 | 79 | 50 | 1 | 107 | 184 | 7 | 85 | 5.74e-11 | 59.3 |
| MS.gene38190.t1 | AT5G61030 | 43.210 | 81 | 44 | 1 | 5 | 83 | 39 | 119 | 8.57e-14 | 72.8 |
| MS.gene38190.t1 | AT5G61030 | 43.210 | 81 | 44 | 1 | 5 | 83 | 39 | 119 | 8.57e-14 | 72.8 |
| MS.gene38190.t1 | AT1G22330 | 41.333 | 75 | 43 | 1 | 7 | 80 | 18 | 92 | 1.31e-13 | 72.0 |
| MS.gene38190.t1 | AT4G13850 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 1.44e-13 | 68.2 |
| MS.gene38190.t1 | AT2G46780 | 39.474 | 76 | 45 | 1 | 7 | 81 | 23 | 98 | 1.49e-13 | 72.4 |
| MS.gene38190.t1 | AT2G46780 | 35.106 | 94 | 61 | 0 | 104 | 197 | 20 | 113 | 3.14e-11 | 65.1 |
| MS.gene38190.t1 | AT2G46780 | 39.474 | 76 | 45 | 1 | 7 | 81 | 23 | 98 | 1.49e-13 | 72.4 |
| MS.gene38190.t1 | AT2G46780 | 35.106 | 94 | 61 | 0 | 104 | 197 | 20 | 113 | 3.14e-11 | 65.1 |
| MS.gene38190.t1 | AT4G13850 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 2.11e-13 | 68.2 |
| MS.gene38190.t1 | AT5G04280 | 39.241 | 79 | 47 | 1 | 107 | 184 | 8 | 86 | 2.59e-13 | 71.2 |
| MS.gene38190.t1 | AT5G04280 | 36.082 | 97 | 55 | 2 | 7 | 101 | 8 | 99 | 1.92e-12 | 68.6 |
| MS.gene38190.t1 | AT4G13850 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 2.60e-13 | 68.2 |
| MS.gene38190.t1 | AT4G13850 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 2.91e-13 | 68.2 |
| MS.gene38190.t1 | AT4G00830 | 29.508 | 183 | 96 | 5 | 7 | 184 | 117 | 271 | 3.45e-13 | 72.0 |
| MS.gene38190.t1 | AT4G00830 | 29.508 | 183 | 96 | 5 | 7 | 184 | 117 | 271 | 3.45e-13 | 72.0 |
| MS.gene38190.t1 | AT1G22910 | 37.333 | 75 | 46 | 1 | 7 | 80 | 14 | 88 | 3.68e-13 | 69.7 |
| MS.gene38190.t1 | AT1G22910 | 37.333 | 75 | 46 | 1 | 7 | 80 | 14 | 88 | 3.72e-13 | 69.7 |
| MS.gene38190.t1 | AT3G52150 | 29.775 | 178 | 108 | 5 | 7 | 177 | 77 | 244 | 4.61e-13 | 69.7 |
| MS.gene38190.t1 | AT3G52150 | 29.775 | 178 | 108 | 5 | 7 | 177 | 77 | 244 | 4.61e-13 | 69.7 |
| MS.gene38190.t1 | AT4G39260 | 39.474 | 76 | 44 | 1 | 7 | 80 | 7 | 82 | 9.42e-13 | 65.5 |
| MS.gene38190.t1 | AT1G78260 | 40.000 | 75 | 44 | 1 | 7 | 80 | 18 | 92 | 9.71e-13 | 69.3 |
| MS.gene38190.t1 | AT1G60650 | 43.750 | 80 | 42 | 2 | 107 | 184 | 13 | 91 | 1.14e-12 | 68.9 |
| MS.gene38190.t1 | AT1G60650 | 39.241 | 79 | 46 | 1 | 7 | 83 | 13 | 91 | 2.06e-12 | 68.2 |
| MS.gene38190.t1 | AT1G60650 | 43.750 | 80 | 42 | 2 | 107 | 184 | 13 | 91 | 1.14e-12 | 68.9 |
| MS.gene38190.t1 | AT1G60650 | 39.241 | 79 | 46 | 1 | 7 | 83 | 13 | 91 | 2.06e-12 | 68.2 |
| MS.gene38190.t1 | AT1G78260 | 40.000 | 75 | 44 | 1 | 7 | 80 | 18 | 92 | 1.33e-12 | 68.6 |
| MS.gene38190.t1 | AT4G27000 | 29.762 | 168 | 95 | 7 | 8 | 164 | 175 | 330 | 1.87e-12 | 69.3 |
| MS.gene38190.t1 | AT5G50250 | 28.191 | 188 | 110 | 5 | 4 | 181 | 111 | 283 | 2.02e-12 | 68.2 |
| MS.gene38190.t1 | AT1G74230 | 45.570 | 79 | 42 | 1 | 5 | 82 | 33 | 111 | 2.02e-12 | 68.2 |
| MS.gene38190.t1 | AT2G36660 | 30.688 | 189 | 112 | 8 | 8 | 185 | 203 | 383 | 2.02e-12 | 70.1 |
| MS.gene38190.t1 | AT1G22910 | 37.333 | 75 | 46 | 1 | 7 | 80 | 14 | 88 | 2.12e-12 | 68.9 |
| MS.gene38190.t1 | AT3G54770 | 38.667 | 75 | 45 | 1 | 7 | 80 | 18 | 92 | 2.41e-12 | 67.4 |
| MS.gene38190.t1 | AT3G26420 | 38.462 | 78 | 46 | 1 | 7 | 82 | 8 | 85 | 2.66e-12 | 67.0 |
| MS.gene38190.t1 | AT1G47490 | 30.055 | 183 | 97 | 6 | 8 | 176 | 199 | 364 | 2.76e-12 | 68.9 |
| MS.gene38190.t1 | AT3G54770 | 38.667 | 75 | 45 | 1 | 7 | 80 | 18 | 92 | 3.99e-12 | 67.0 |
| MS.gene38190.t1 | AT4G39260 | 39.474 | 76 | 44 | 1 | 7 | 80 | 7 | 82 | 4.52e-12 | 64.7 |
| MS.gene38190.t1 | AT1G47500 | 30.682 | 176 | 105 | 5 | 8 | 176 | 201 | 366 | 5.18e-12 | 68.2 |
| MS.gene38190.t1 | AT1G34140 | 28.108 | 185 | 116 | 7 | 2 | 176 | 111 | 288 | 8.68e-12 | 67.4 |
| MS.gene38190.t1 | AT5G54900 | 25.126 | 199 | 125 | 6 | 3 | 195 | 57 | 237 | 1.11e-11 | 67.0 |
| MS.gene38190.t1 | AT5G54900 | 31.737 | 167 | 94 | 7 | 8 | 164 | 156 | 312 | 2.69e-11 | 65.9 |
| MS.gene38190.t1 | AT4G39260 | 43.333 | 60 | 34 | 0 | 7 | 66 | 7 | 66 | 2.05e-11 | 61.2 |
| MS.gene38190.t1 | AT3G14100 | 28.324 | 173 | 95 | 6 | 8 | 157 | 146 | 312 | 2.25e-11 | 66.2 |
| MS.gene38190.t1 | AT2G23350 | 28.977 | 176 | 109 | 6 | 8 | 176 | 227 | 393 | 2.64e-11 | 66.6 |
| MS.gene38190.t1 | AT3G08000 | 46.269 | 67 | 33 | 1 | 7 | 73 | 42 | 105 | 3.29e-11 | 61.6 |
| MS.gene38190.t1 | AT3G16380 | 27.160 | 162 | 113 | 4 | 4 | 162 | 200 | 359 | 3.70e-11 | 65.9 |
| MS.gene38190.t1 | AT3G19130 | 28.272 | 191 | 113 | 7 | 4 | 184 | 106 | 282 | 6.23e-11 | 64.7 |
| MS.gene38190.t1 | AT1G18630 | 40.845 | 71 | 40 | 1 | 7 | 75 | 37 | 107 | 9.29e-11 | 60.8 |
Find 166 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGTTCTTCGCCGATTTC+TGG | 0.115608 | 5.3:+78861342 | MS.gene38190:CDS |
| TTAATAAAAGGCAGCCAAAT+AGG | 0.234985 | 5.3:+78861688 | MS.gene38190:CDS |
| CCTGGTTTGAGTCCTGGTTT+TGG | 0.269369 | 5.3:+78861057 | MS.gene38190:CDS |
| CGAAATGCATTTGCACCATT+TGG | 0.270381 | 5.3:+78861003 | MS.gene38190:CDS |
| AGGGAGTATTTCAGTACTTA+TGG | 0.286225 | 5.3:+78859919 | MS.gene38190:CDS |
| CCAAGTACTGTCAGTGGTTA+TGG | 0.301066 | 5.3:+78860940 | MS.gene38190:CDS |
| AAGAAGTACTTTGACCAGTT+TGG | 0.302105 | 5.3:+78860655 | MS.gene38190:CDS |
| TCATGAATTGAATGGTAAAA+TGG | 0.314163 | 5.3:+78860792 | MS.gene38190:CDS |
| ATGTCGCTCTTACCCCTATT+TGG | 0.317513 | 5.3:-78861702 | None:intergenic |
| AGAAGTACTTTGACCAGTTT+GGG | 0.325562 | 5.3:+78860656 | MS.gene38190:CDS |
| GCACCATTTGGATCTGGTTA+TGG | 0.328498 | 5.3:+78861015 | MS.gene38190:CDS |
| GGTCCCTTCGGTTACGGACT+TGG | 0.329728 | 5.3:+78861606 | MS.gene38190:CDS |
| ACTGGTAGAGCTCGTGGATT+TGG | 0.332076 | 5.3:+78859979 | MS.gene38190:CDS |
| AGAGGAGAGCGGGTAGGTCC+TGG | 0.335119 | 5.3:-78860850 | None:intergenic |
| TAATAAAAGGCAGCCAAATA+GGG | 0.346895 | 5.3:+78861689 | MS.gene38190:CDS |
| ACTCAGAGGCCAAGAGGCTT+TGG | 0.352006 | 5.3:+78860715 | MS.gene38190:CDS |
| GGAAATGCATTTGGCAATAC+TGG | 0.353181 | 5.3:+78861312 | MS.gene38190:CDS |
| TTTCTTGAATGGCTTCAATC+AGG | 0.365914 | 5.3:+78860909 | MS.gene38190:CDS |
| CCATAACCACTGACAGTACT+TGG | 0.369122 | 5.3:-78860940 | None:intergenic |
| GGTAGGTTCAGTCCGGTTGC+TGG | 0.371671 | 5.3:+78860976 | MS.gene38190:CDS |
| TTTGAGCCTGGTTTGAGTCC+TGG | 0.371865 | 5.3:+78861051 | MS.gene38190:CDS |
| GGTAGTGGCAATCTTGGATA+TGG | 0.372310 | 5.3:+78861393 | MS.gene38190:CDS |
| AGTATAACCACCAACATAAC+CGG | 0.379311 | 5.3:-78861664 | None:intergenic |
| CAGTACTTATGGAGAGGTTA+AGG | 0.382272 | 5.3:+78859930 | MS.gene38190:CDS |
| AACAGGACTGCCAAACCTAT+TGG | 0.383933 | 5.3:-78861148 | None:intergenic |
| GGCAACAATGGTTATGGATT+GGG | 0.383968 | 5.3:+78861420 | MS.gene38190:CDS |
| CAAATGGTGCAAATGCATTT+CGG | 0.395585 | 5.3:-78861002 | None:intergenic |
| GGAGGTGGCAACAATGGTTA+TGG | 0.407795 | 5.3:+78861414 | MS.gene38190:CDS |
| GTGGTTATACTGTTAATAAA+AGG | 0.411458 | 5.3:+78861676 | MS.gene38190:CDS |
| ACTTCATCAGCGGCTCCAAT+AGG | 0.418956 | 5.3:+78861133 | MS.gene38190:CDS |
| TGTCAGTGGTTATGGACTTC+GGG | 0.420303 | 5.3:+78860948 | MS.gene38190:CDS |
| TCACAGGGTAGTGGCAATCT+TGG | 0.421665 | 5.3:+78861387 | MS.gene38190:CDS |
| TTTGGATCTGGTTATGGAAT+GGG | 0.422212 | 5.3:+78861021 | MS.gene38190:CDS |
| CGGACTTGGTGGCGCACCTT+CGG | 0.424422 | 5.3:+78861620 | MS.gene38190:CDS |
| GCATTTGCACCATTTGGATC+TGG | 0.433796 | 5.3:+78861009 | MS.gene38190:CDS |
| CGTACTCGAAAGATATTTGT+TGG | 0.441713 | 5.3:+78860598 | MS.gene38190:CDS |
| GGAGGGAATGCAAATTTCAA+TGG | 0.441921 | 5.3:+78861078 | MS.gene38190:CDS |
| GGATCTGGTCCCTTCGGTTA+CGG | 0.442912 | 5.3:+78861600 | MS.gene38190:CDS |
| GATAGTGGCAAGCTATTTAT+CGG | 0.442915 | 5.3:+78859862 | MS.gene38190:CDS |
| GATAAAATGCAATCCGATAG+TGG | 0.444623 | 5.3:+78859847 | None:intergenic |
| AAGACGTTTCATGAATTGAA+TGG | 0.446280 | 5.3:+78860784 | MS.gene38190:CDS |
| CCTCTCAGTGGATACAACTA+TGG | 0.448490 | 5.3:+78860868 | MS.gene38190:CDS |
| GCATTTCGGCCACCAGCAAC+CGG | 0.451852 | 5.3:-78860988 | None:intergenic |
| TTCAATGGCAATCTTAGCTA+TGG | 0.455039 | 5.3:+78861093 | MS.gene38190:CDS |
| CTGTCAGTGGTTATGGACTT+CGG | 0.456654 | 5.3:+78860947 | MS.gene38190:CDS |
| CGGTCTATGGGGACACCACT+TGG | 0.459862 | 5.3:+78861553 | MS.gene38190:CDS |
| TCCAATGCATACATTGGATC+AGG | 0.460296 | 5.3:+78861273 | MS.gene38190:CDS |
| GGGAATGGAAGCCTCAACTA+TGG | 0.461149 | 5.3:+78861234 | MS.gene38190:CDS |
| ATCAGCGGCTCCAATAGGTT+TGG | 0.462740 | 5.3:+78861138 | MS.gene38190:CDS |
| AGGCGAAGAAAGCTGTTCCT+AGG | 0.462848 | 5.3:+78860515 | MS.gene38190:CDS |
| TCTTCATACTCTACATCAAA+TGG | 0.463413 | 5.3:+78861489 | MS.gene38190:CDS |
| AGGGTCAATAGTTTCTTGAA+TGG | 0.463707 | 5.3:+78860898 | MS.gene38190:CDS |
| TTCAGTGACTCGAAACTTGT+GGG | 0.464785 | 5.3:+78861212 | MS.gene38190:CDS |
| TTTACAACAATTCGGTCTAT+GGG | 0.465614 | 5.3:+78861541 | MS.gene38190:CDS |
| ACTTCTCCCGGTTATGTTGG+TGG | 0.467141 | 5.3:+78861657 | MS.gene38190:CDS |
| AATGTTGGAGGAAATGCATT+TGG | 0.468936 | 5.3:+78861303 | MS.gene38190:CDS |
| GAGGAGAGCGGGTAGGTCCT+GGG | 0.471867 | 5.3:-78860849 | None:intergenic |
| ATAATGAAAGATCGGACAAC+TGG | 0.474467 | 5.3:+78859961 | MS.gene38190:CDS |
| TTGGCAATACTGGAGTCAAC+TGG | 0.476374 | 5.3:+78861322 | MS.gene38190:CDS |
| GGCAGCATCCATGGTTCTCC+TGG | 0.477383 | 5.3:+78860568 | MS.gene38190:CDS |
| TCCTGATCCAATGTATGCAT+TGG | 0.477405 | 5.3:-78861274 | None:intergenic |
| GTGATAAATCCAAAGCCTCT+TGG | 0.479962 | 5.3:-78860724 | None:intergenic |
| ATTTGGATCTGGTTATGGAA+TGG | 0.480660 | 5.3:+78861020 | MS.gene38190:CDS |
| TTACCACTTTCATATCCAAC+AGG | 0.481210 | 5.3:-78861165 | None:intergenic |
| ACACAAATGAAGAGCGACTC+AGG | 0.484238 | 5.3:+78859899 | MS.gene38190:CDS |
| GCGAATTCCAATGCATACAT+TGG | 0.490062 | 5.3:+78861267 | MS.gene38190:CDS |
| GGGAGGGAACAATGTGTCAC+AGG | 0.491264 | 5.3:+78861371 | MS.gene38190:CDS |
| AGAGATGGATCTGGTCCCTT+CGG | 0.492162 | 5.3:+78861594 | MS.gene38190:CDS |
| CATCTGTTATAGTCCCAAAC+TGG | 0.492506 | 5.3:-78860669 | None:intergenic |
| GGTCCTGGGGATAACTCCTT+AGG | 0.494582 | 5.3:-78860835 | None:intergenic |
| ATCCATGGTTCTCCTGGTCC+AGG | 0.495364 | 5.3:+78860574 | MS.gene38190:CDS |
| CTTCGCCGATTTCTGGACAT+GGG | 0.496859 | 5.3:+78861349 | MS.gene38190:CDS |
| TGGCAATCTTAGCTATGGAC+GGG | 0.497904 | 5.3:+78861098 | MS.gene38190:CDS |
| TGGCAACAATGGTTATGGAT+TGG | 0.499108 | 5.3:+78861419 | MS.gene38190:CDS |
| GCATACATTGGATCAGGAAG+TGG | 0.499227 | 5.3:+78861279 | MS.gene38190:CDS |
| CCCTTCGGTTACGGACTTGG+TGG | 0.499873 | 5.3:+78861609 | MS.gene38190:CDS |
| TTGGAGCCGCTGATGAAGTA+AGG | 0.500786 | 5.3:-78861129 | None:intergenic |
| ATGGACTTCGGGTGGATGGT+AGG | 0.503258 | 5.3:+78860959 | MS.gene38190:CDS |
| TCTTCGCCGATTTCTGGACA+TGG | 0.506686 | 5.3:+78861348 | MS.gene38190:CDS |
| TTCTTGAATGGCTTCAATCA+GGG | 0.506734 | 5.3:+78860910 | MS.gene38190:CDS |
| GGTTATGGATTGGGGACTGA+AGG | 0.507374 | 5.3:+78861429 | MS.gene38190:CDS |
| AATAGGTTTGGCAGTCCTGT+TGG | 0.507880 | 5.3:+78861150 | MS.gene38190:CDS |
| GATAAATAGCTTGCCACTAT+CGG | 0.512544 | 5.3:-78859860 | None:intergenic |
| GTTCCTAAGGAGTTATCCCC+AGG | 0.512565 | 5.3:+78860832 | MS.gene38190:CDS |
| TCAAATGGTGGCGGTGTCGA+TGG | 0.513105 | 5.3:+78861504 | MS.gene38190:CDS |
| GGTCAAGCGAGCAGTTCCTA+AGG | 0.520328 | 5.3:+78860819 | MS.gene38190:CDS |
| GATGTAGAGTATGAAGATGT+TGG | 0.525251 | 5.3:-78861483 | None:intergenic |
| TCGAGTCACTGAACTGAAGA+AGG | 0.526474 | 5.3:-78861202 | None:intergenic |
| AACAATGTGTCACAGGGTAG+TGG | 0.527545 | 5.3:+78861378 | MS.gene38190:CDS |
| AAGACTTCTCCCGGTTATGT+TGG | 0.528862 | 5.3:+78861654 | MS.gene38190:CDS |
| TTCTGAAGAAGCTGTTGACC+AGG | 0.531868 | 5.3:+78860753 | MS.gene38190:CDS |
| GATACAACTATGGTCTGAGT+AGG | 0.534677 | 5.3:+78860878 | MS.gene38190:CDS |
| TCAGGAAGTGGGAATGTTGG+AGG | 0.535187 | 5.3:+78861291 | MS.gene38190:CDS |
| GTTTCTGCTAAGACTTCTCC+CGG | 0.538342 | 5.3:+78861645 | MS.gene38190:CDS |
| GTTATGGATTGGGGACTGAA+GGG | 0.539193 | 5.3:+78861430 | MS.gene38190:CDS |
| AGAACTAGCGGCAGCATCCA+TGG | 0.540555 | 5.3:+78860559 | MS.gene38190:CDS |
| GTATCCACTGAGAGGAGAGC+GGG | 0.544247 | 5.3:-78860860 | None:intergenic |
| GGATCAGGAAGTGGGAATGT+TGG | 0.544657 | 5.3:+78861288 | MS.gene38190:CDS |
| GGTGGATGGTAGGTTCAGTC+CGG | 0.547575 | 5.3:+78860969 | MS.gene38190:CDS |
| GGTTATGGACTTCGGGTGGA+TGG | 0.547930 | 5.3:+78860955 | MS.gene38190:CDS |
| TTTGCATTCCCTCCAAAACC+AGG | 0.550961 | 5.3:-78861069 | None:intergenic |
| GTTCAGTGACTCGAAACTTG+TGG | 0.552521 | 5.3:+78861211 | MS.gene38190:CDS |
| GGCAATCTTGGATATGGAGG+TGG | 0.555020 | 5.3:+78861399 | MS.gene38190:CDS |
| GGATTGGGGACTGAAGGGTA+TGG | 0.556882 | 5.3:+78861435 | MS.gene38190:CDS |
| AATTCTGAGAGAGATGGATC+TGG | 0.557338 | 5.3:+78861585 | MS.gene38190:CDS |
| TCTTCAAATTCTGAGAGAGA+TGG | 0.557905 | 5.3:+78861579 | MS.gene38190:CDS |
| AAGCAGTGATAATGAAAGAT+CGG | 0.559068 | 5.3:+78859953 | MS.gene38190:CDS |
| GGATATGGAGGTGGCAACAA+TGG | 0.566057 | 5.3:+78861408 | MS.gene38190:CDS |
| GCAACAATGGTTATGGATTG+GGG | 0.566889 | 5.3:+78861421 | MS.gene38190:CDS |
| CAAGAGAAGCACAACATCGA+TGG | 0.568209 | 5.3:+78860045 | MS.gene38190:CDS |
| AGGAGAGCGGGTAGGTCCTG+GGG | 0.568371 | 5.3:-78860848 | None:intergenic |
| TTCGCCGATTTCTGGACATG+GGG | 0.568888 | 5.3:+78861350 | MS.gene38190:CDS |
| ACTCGAAAGATATTTGTTGG+AGG | 0.570498 | 5.3:+78860601 | MS.gene38190:CDS |
| ATGGCAATCTTAGCTATGGA+CGG | 0.574297 | 5.3:+78861097 | MS.gene38190:CDS |
| AGGTTCAGTCCGGTTGCTGG+TGG | 0.575407 | 5.3:+78860979 | MS.gene38190:CDS |
| CGGACAACTGGTAGAGCTCG+TGG | 0.575457 | 5.3:+78859973 | MS.gene38190:CDS |
| CAGAATTTGATCCATAGTTG+AGG | 0.580151 | 5.3:-78861245 | None:intergenic |
| GGCGAAGAAAGCTGTTCCTA+GGG | 0.581977 | 5.3:+78860516 | MS.gene38190:CDS |
| AATAAAAGGCAGCCAAATAG+GGG | 0.583343 | 5.3:+78861690 | MS.gene38190:CDS |
| ATTCCATAACCAGATCCAAA+TGG | 0.585399 | 5.3:-78861018 | None:intergenic |
| CCAAAACCAGGACTCAAACC+AGG | 0.587155 | 5.3:-78861057 | None:intergenic |
| ATTGAATGGTAAAATGGTTG+AGG | 0.589220 | 5.3:+78860798 | MS.gene38190:CDS |
| AATACATTCTGATCGTCCCT+AGG | 0.590803 | 5.3:-78860532 | None:intergenic |
| TATTTATCGGTGGAATATCG+TGG | 0.592718 | 5.3:+78859875 | MS.gene38190:CDS |
| TACTCTACATCAAATGGTGG+CGG | 0.594112 | 5.3:+78861495 | MS.gene38190:CDS |
| GCACAACATCGATGGAAGGA+TGG | 0.596421 | 5.3:+78860053 | MS.gene38190:CDS |
| GCCACCAAGTCCGTAACCGA+AGG | 0.601691 | 5.3:-78861610 | None:intergenic |
| TGAAGATGTTGGTGCAAGAG+TGG | 0.603368 | 5.3:-78861472 | None:intergenic |
| GTTGGATATGAAAGTGGTAA+CGG | 0.610186 | 5.3:+78861168 | MS.gene38190:CDS |
| GTATTTCAGTACTTATGGAG+AGG | 0.612839 | 5.3:+78859924 | MS.gene38190:CDS |
| TTTCGAGTACGACCTGGACC+AGG | 0.615545 | 5.3:-78860586 | None:intergenic |
| ACGACAATATCTGCAACAGC+TGG | 0.617462 | 5.3:-78860021 | None:intergenic |
| GGCAATCTTAGCTATGGACG+GGG | 0.618662 | 5.3:+78861099 | MS.gene38190:CDS |
| ATTTATCGGTGGAATATCGT+GGG | 0.618688 | 5.3:+78859876 | MS.gene38190:CDS |
| ATACAACTATGGTCTGAGTA+GGG | 0.621941 | 5.3:+78860879 | MS.gene38190:CDS |
| AATATCTTTCGAGTACGACC+TGG | 0.622412 | 5.3:-78860592 | None:intergenic |
| CATACATTGGATCAGGAAGT+GGG | 0.623256 | 5.3:+78861280 | MS.gene38190:CDS |
| GAAGGGTATGGAAGAAGCAG+TGG | 0.627348 | 5.3:+78861447 | MS.gene38190:CDS |
| TTAAATCCTTACTTCATCAG+CGG | 0.627455 | 5.3:+78861123 | MS.gene38190:CDS |
| CACAAATGAAGAGCGACTCA+GGG | 0.630913 | 5.3:+78859900 | MS.gene38190:CDS |
| AGAAGCACAACATCGATGGA+AGG | 0.632051 | 5.3:+78860049 | MS.gene38190:CDS |
| GGAGGGAACAATGTGTCACA+GGG | 0.632586 | 5.3:+78861372 | MS.gene38190:CDS |
| CCACCAAGTCCGTAACCGAA+GGG | 0.642362 | 5.3:-78861609 | None:intergenic |
| GGATATGAAAGTGGTAACGG+AGG | 0.645295 | 5.3:+78861171 | MS.gene38190:CDS |
| CACAACACTCAGAGGCCAAG+AGG | 0.646935 | 5.3:+78860709 | MS.gene38190:CDS |
| AGTCCTGTTGGATATGAAAG+TGG | 0.648675 | 5.3:+78861162 | MS.gene38190:CDS |
| AGTGGCAATCTTGGATATGG+AGG | 0.650388 | 5.3:+78861396 | MS.gene38190:CDS |
| TCAGTGACTCGAAACTTGTG+GGG | 0.656104 | 5.3:+78861213 | MS.gene38190:CDS |
| TTACAACAATTCGGTCTATG+GGG | 0.656588 | 5.3:+78861542 | MS.gene38190:CDS |
| CAGTGGTTATGGACTTCGGG+TGG | 0.656987 | 5.3:+78860951 | MS.gene38190:CDS |
| GTATAACCACCAACATAACC+GGG | 0.661434 | 5.3:-78861663 | None:intergenic |
| GAAACGTCTTAAGTAAGACC+TGG | 0.661991 | 5.3:-78860771 | None:intergenic |
| TCGCCGATTTCTGGACATGG+GGG | 0.663346 | 5.3:+78861351 | MS.gene38190:CDS |
| TATAGTCCAAGTACTGTCAG+TGG | 0.666281 | 5.3:+78860934 | MS.gene38190:CDS |
| GTCTTAGCAGAAACATCCGA+AGG | 0.667846 | 5.3:-78861636 | None:intergenic |
| TGTATCCACTGAGAGGAGAG+CGG | 0.671738 | 5.3:-78860861 | None:intergenic |
| CCTACCCGCTCTCCTCTCAG+TGG | 0.674662 | 5.3:+78860856 | MS.gene38190:CDS |
| TCATACTCTACATCAAATGG+TGG | 0.681792 | 5.3:+78861492 | MS.gene38190:CDS |
| AATGTATTGAGTAGAACTAG+CGG | 0.682442 | 5.3:+78860547 | MS.gene38190:CDS |
| CCATAGTTGTATCCACTGAG+AGG | 0.683991 | 5.3:-78860868 | None:intergenic |
| GACCTGGACCAGGAGAACCA+TGG | 0.685524 | 5.3:-78860576 | None:intergenic |
| TGTATGATCACAACACTCAG+AGG | 0.686370 | 5.3:+78860701 | MS.gene38190:CDS |
| AGTGGCAAGCTATTTATCGG+TGG | 0.687015 | 5.3:+78859865 | MS.gene38190:CDS |
| AGAATTTGAAGATCGCCAAG+TGG | 0.701973 | 5.3:-78861568 | None:intergenic |
| CCACTGAGAGGAGAGCGGGT+AGG | 0.705666 | 5.3:-78860856 | None:intergenic |
| CAGTGACTCGAAACTTGTGG+GGG | 0.709575 | 5.3:+78861214 | MS.gene38190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATTAACTATAAATCACA+AGG | - | chr5.3:78860474-78860493 | None:intergenic | 20.0% |
| !! | ATCATAAACAGTTATATGAT+TGG | - | chr5.3:78860282-78860301 | None:intergenic | 20.0% |
| !! | ATTAGAGAATGAAGTATATA+GGG | - | chr5.3:78860391-78860410 | None:intergenic | 20.0% |
| !! | CTAATGCAATATAATTCAAA+AGG | - | chr5.3:78860144-78860163 | None:intergenic | 20.0% |
| !! | GTATTAACTATAAATCACAA+GGG | - | chr5.3:78860473-78860492 | None:intergenic | 20.0% |
| !! | TATTAACTATAAATCACAAG+GGG | - | chr5.3:78860472-78860491 | None:intergenic | 20.0% |
| !! | TCATAAACAGTTATATGATT+GGG | - | chr5.3:78860281-78860300 | None:intergenic | 20.0% |
| ! | ATTAACTATAAATCACAAGG+GGG | - | chr5.3:78860471-78860490 | None:intergenic | 25.0% |
| ! | CATTAGAGAATGAAGTATAT+AGG | - | chr5.3:78860392-78860411 | None:intergenic | 25.0% |
| ! | GTGGTTATACTGTTAATAAA+AGG | + | chr5.3:78861676-78861695 | MS.gene38190:CDS | 25.0% |
| ! | TCATGAATTGAATGGTAAAA+TGG | + | chr5.3:78860792-78860811 | MS.gene38190:CDS | 25.0% |
| !!! | TGCTGATTTTTACAACAATT+CGG | + | chr5.3:78861533-78861552 | MS.gene38190:CDS | 25.0% |
| AAGACGTTTCATGAATTGAA+TGG | + | chr5.3:78860784-78860803 | MS.gene38190:CDS | 30.0% | |
| AATGTATTGAGTAGAACTAG+CGG | + | chr5.3:78860547-78860566 | MS.gene38190:CDS | 30.0% | |
| ATTGAATGGTAAAATGGTTG+AGG | + | chr5.3:78860798-78860817 | MS.gene38190:CDS | 30.0% | |
| TAATAAAAGGCAGCCAAATA+GGG | + | chr5.3:78861689-78861708 | MS.gene38190:CDS | 30.0% | |
| TCCATCTTAAAATGTAGCTA+AGG | - | chr5.3:78860350-78860369 | None:intergenic | 30.0% | |
| TCTTCATACTCTACATCAAA+TGG | + | chr5.3:78861489-78861508 | MS.gene38190:CDS | 30.0% | |
| TTAAATCCTTACTTCATCAG+CGG | + | chr5.3:78861123-78861142 | MS.gene38190:CDS | 30.0% | |
| TTAACTATAAATCACAAGGG+GGG | - | chr5.3:78860470-78860489 | None:intergenic | 30.0% | |
| TTAATAAAAGGCAGCCAAAT+AGG | + | chr5.3:78861688-78861707 | MS.gene38190:CDS | 30.0% | |
| TTCCATCCAAGATTTGAATT+CGG | + | chr5.3:78860207-78860226 | MS.gene38190:intron | 30.0% | |
| TTTACAACAATTCGGTCTAT+GGG | + | chr5.3:78861541-78861560 | MS.gene38190:CDS | 30.0% | |
| ! | AAGCAGTGATAATGAAAGAT+CGG | + | chr5.3:78859953-78859972 | MS.gene38190:CDS | 30.0% |
| ! | ATACTTTTGCATCTTTCACT+AGG | + | chr5.3:78860489-78860508 | MS.gene38190:intron | 30.0% |
| ! | TTTTACAACAATTCGGTCTA+TGG | + | chr5.3:78861540-78861559 | MS.gene38190:CDS | 30.0% |
| !! | TCCTTAGCTACATTTTAAGA+TGG | + | chr5.3:78860346-78860365 | MS.gene38190:intron | 30.0% |
| AATAAAAGGCAGCCAAATAG+GGG | + | chr5.3:78861690-78861709 | MS.gene38190:CDS | 35.0% | |
| AATCCATGGACTTAAAAGAG+GGG | - | chr5.3:78860095-78860114 | None:intergenic | 35.0% | |
| AATGTTGGAGGAAATGCATT+TGG | + | chr5.3:78861303-78861322 | MS.gene38190:CDS | 35.0% | |
| AGGGTCAATAGTTTCTTGAA+TGG | + | chr5.3:78860898-78860917 | MS.gene38190:CDS | 35.0% | |
| AGTATAACCACCAACATAAC+CGG | - | chr5.3:78861667-78861686 | None:intergenic | 35.0% | |
| ATAATGAAAGATCGGACAAC+TGG | + | chr5.3:78859961-78859980 | MS.gene38190:CDS | 35.0% | |
| ATACAACTATGGTCTGAGTA+GGG | + | chr5.3:78860879-78860898 | MS.gene38190:CDS | 35.0% | |
| ATTCCATAACCAGATCCAAA+TGG | - | chr5.3:78861021-78861040 | None:intergenic | 35.0% | |
| ATTTATCGGTGGAATATCGT+GGG | + | chr5.3:78859876-78859895 | MS.gene38190:CDS | 35.0% | |
| ATTTGGATCTGGTTATGGAA+TGG | + | chr5.3:78861020-78861039 | MS.gene38190:CDS | 35.0% | |
| CAAATGGTGCAAATGCATTT+CGG | - | chr5.3:78861005-78861024 | None:intergenic | 35.0% | |
| CAATCCATGGACTTAAAAGA+GGG | - | chr5.3:78860096-78860115 | None:intergenic | 35.0% | |
| CAGAATTTGATCCATAGTTG+AGG | - | chr5.3:78861248-78861267 | None:intergenic | 35.0% | |
| CGTACTCGAAAGATATTTGT+TGG | + | chr5.3:78860598-78860617 | MS.gene38190:CDS | 35.0% | |
| GATGTAGAGTATGAAGATGT+TGG | - | chr5.3:78861486-78861505 | None:intergenic | 35.0% | |
| GTATTTCAGTACTTATGGAG+AGG | + | chr5.3:78859924-78859943 | MS.gene38190:CDS | 35.0% | |
| GTTGGATATGAAAGTGGTAA+CGG | + | chr5.3:78861168-78861187 | MS.gene38190:CDS | 35.0% | |
| TAACTATAAATCACAAGGGG+GGG | - | chr5.3:78860469-78860488 | None:intergenic | 35.0% | |
| TAGAACCCGAATTCAAATCT+TGG | - | chr5.3:78860216-78860235 | None:intergenic | 35.0% | |
| TAGGGAAATATACTTCCTCT+TGG | - | chr5.3:78860373-78860392 | None:intergenic | 35.0% | |
| TATTTATCGGTGGAATATCG+TGG | + | chr5.3:78859875-78859894 | MS.gene38190:CDS | 35.0% | |
| TCATACTCTACATCAAATGG+TGG | + | chr5.3:78861492-78861511 | MS.gene38190:CDS | 35.0% | |
| TCATGTCAAAATGCAATCCA+TGG | - | chr5.3:78860109-78860128 | None:intergenic | 35.0% | |
| TCCATCCAAGATTTGAATTC+GGG | + | chr5.3:78860208-78860227 | MS.gene38190:intron | 35.0% | |
| TTACAACAATTCGGTCTATG+GGG | + | chr5.3:78861542-78861561 | MS.gene38190:CDS | 35.0% | |
| TTACCACTTTCATATCCAAC+AGG | - | chr5.3:78861168-78861187 | None:intergenic | 35.0% | |
| TTCAATGGCAATCTTAGCTA+TGG | + | chr5.3:78861093-78861112 | MS.gene38190:CDS | 35.0% | |
| TTCTTGAATGGCTTCAATCA+GGG | + | chr5.3:78860910-78860929 | MS.gene38190:CDS | 35.0% | |
| TTTCTTGAATGGCTTCAATC+AGG | + | chr5.3:78860909-78860928 | MS.gene38190:CDS | 35.0% | |
| TTTGGATCTGGTTATGGAAT+GGG | + | chr5.3:78861021-78861040 | MS.gene38190:CDS | 35.0% | |
| ! | ACTCGAAAGATATTTGTTGG+AGG | + | chr5.3:78860601-78860620 | MS.gene38190:CDS | 35.0% |
| ! | GATAAATAGCTTGCCACTAT+CGG | - | chr5.3:78859863-78859882 | None:intergenic | 35.0% |
| ! | GATAGTGGCAAGCTATTTAT+CGG | + | chr5.3:78859862-78859881 | MS.gene38190:CDS | 35.0% |
| ! | TCTTCAAATTCTGAGAGAGA+TGG | + | chr5.3:78861579-78861598 | MS.gene38190:CDS | 35.0% |
| !! | AAGAAGTACTTTGACCAGTT+TGG | + | chr5.3:78860655-78860674 | MS.gene38190:CDS | 35.0% |
| !! | AGAAGTACTTTGACCAGTTT+GGG | + | chr5.3:78860656-78860675 | MS.gene38190:CDS | 35.0% |
| !! | AGGGAGTATTTCAGTACTTA+TGG | + | chr5.3:78859919-78859938 | MS.gene38190:CDS | 35.0% |
| !!! | ACATTTTAAGATGGACCAAG+AGG | + | chr5.3:78860355-78860374 | MS.gene38190:intron | 35.0% |
| AATACATTCTGATCGTCCCT+AGG | - | chr5.3:78860535-78860554 | None:intergenic | 40.0% | |
| ACCCGAATTCAAATCTTGGA+TGG | - | chr5.3:78860212-78860231 | None:intergenic | 40.0% | |
| AGAATTTGAAGATCGCCAAG+TGG | - | chr5.3:78861571-78861590 | None:intergenic | 40.0% | |
| AGTCCTGTTGGATATGAAAG+TGG | + | chr5.3:78861162-78861181 | MS.gene38190:CDS | 40.0% | |
| ATGGCAATCTTAGCTATGGA+CGG | + | chr5.3:78861097-78861116 | MS.gene38190:CDS | 40.0% | |
| CAGTACTTATGGAGAGGTTA+AGG | + | chr5.3:78859930-78859949 | MS.gene38190:CDS | 40.0% | |
| CATACATTGGATCAGGAAGT+GGG | + | chr5.3:78861280-78861299 | MS.gene38190:CDS | 40.0% | |
| CATCTGTTATAGTCCCAAAC+TGG | - | chr5.3:78860672-78860691 | None:intergenic | 40.0% | |
| CGAAATGCATTTGCACCATT+TGG | + | chr5.3:78861003-78861022 | MS.gene38190:CDS | 40.0% | |
| GAAACGTCTTAAGTAAGACC+TGG | - | chr5.3:78860774-78860793 | None:intergenic | 40.0% | |
| GATACAACTATGGTCTGAGT+AGG | + | chr5.3:78860878-78860897 | MS.gene38190:CDS | 40.0% | |
| GCAATCCATGGACTTAAAAG+AGG | - | chr5.3:78860097-78860116 | None:intergenic | 40.0% | |
| GCGAATTCCAATGCATACAT+TGG | + | chr5.3:78861267-78861286 | MS.gene38190:CDS | 40.0% | |
| GGAAATGCATTTGGCAATAC+TGG | + | chr5.3:78861312-78861331 | MS.gene38190:CDS | 40.0% | |
| GGAGGGAATGCAAATTTCAA+TGG | + | chr5.3:78861078-78861097 | MS.gene38190:CDS | 40.0% | |
| GGCAACAATGGTTATGGATT+GGG | + | chr5.3:78861420-78861439 | MS.gene38190:CDS | 40.0% | |
| GTATAACCACCAACATAACC+GGG | - | chr5.3:78861666-78861685 | None:intergenic | 40.0% | |
| GTGATAAATCCAAAGCCTCT+TGG | - | chr5.3:78860727-78860746 | None:intergenic | 40.0% | |
| GTTATATGATTGGGCTCAAG+TGG | - | chr5.3:78860272-78860291 | None:intergenic | 40.0% | |
| TACTCTACATCAAATGGTGG+CGG | + | chr5.3:78861495-78861514 | MS.gene38190:CDS | 40.0% | |
| TCCAATGCATACATTGGATC+AGG | + | chr5.3:78861273-78861292 | MS.gene38190:CDS | 40.0% | |
| TCCTGATCCAATGTATGCAT+TGG | - | chr5.3:78861277-78861296 | None:intergenic | 40.0% | |
| TGGCAACAATGGTTATGGAT+TGG | + | chr5.3:78861419-78861438 | MS.gene38190:CDS | 40.0% | |
| TGTATGATCACAACACTCAG+AGG | + | chr5.3:78860701-78860720 | MS.gene38190:CDS | 40.0% | |
| TTCAGTGACTCGAAACTTGT+GGG | + | chr5.3:78861212-78861231 | MS.gene38190:CDS | 40.0% | |
| TTGCATCTTTCACTAGGTTG+AGG | + | chr5.3:78860495-78860514 | MS.gene38190:intron | 40.0% | |
| ! | AATATCTTTCGAGTACGACC+TGG | - | chr5.3:78860595-78860614 | None:intergenic | 40.0% |
| ! | AATTCTGAGAGAGATGGATC+TGG | + | chr5.3:78861585-78861604 | MS.gene38190:CDS | 40.0% |
| ! | ATGGGTATGAATTTTGAGCC+TGG | + | chr5.3:78861039-78861058 | MS.gene38190:CDS | 40.0% |
| ! | GCAACAATGGTTATGGATTG+GGG | + | chr5.3:78861421-78861440 | MS.gene38190:CDS | 40.0% |
| ! | TATAGTCCAAGTACTGTCAG+TGG | + | chr5.3:78860934-78860953 | MS.gene38190:CDS | 40.0% |
| AACAATGTGTCACAGGGTAG+TGG | + | chr5.3:78861378-78861397 | MS.gene38190:CDS | 45.0% | |
| AACAGGACTGCCAAACCTAT+TGG | - | chr5.3:78861151-78861170 | None:intergenic | 45.0% | |
| AAGACTTCTCCCGGTTATGT+TGG | + | chr5.3:78861654-78861673 | MS.gene38190:CDS | 45.0% | |
| AATAGGTTTGGCAGTCCTGT+TGG | + | chr5.3:78861150-78861169 | MS.gene38190:CDS | 45.0% | |
| ACACAAATGAAGAGCGACTC+AGG | + | chr5.3:78859899-78859918 | MS.gene38190:CDS | 45.0% | |
| ACGACAATATCTGCAACAGC+TGG | - | chr5.3:78860024-78860043 | None:intergenic | 45.0% | |
| AGTGGCAAGCTATTTATCGG+TGG | + | chr5.3:78859865-78859884 | MS.gene38190:CDS | 45.0% | |
| AGTGGCAATCTTGGATATGG+AGG | + | chr5.3:78861396-78861415 | MS.gene38190:CDS | 45.0% | |
| ATGTCGCTCTTACCCCTATT+TGG | - | chr5.3:78861705-78861724 | None:intergenic | 45.0% | |
| CACAAATGAAGAGCGACTCA+GGG | + | chr5.3:78859900-78859919 | MS.gene38190:CDS | 45.0% | |
| CCATAACCACTGACAGTACT+TGG | - | chr5.3:78860943-78860962 | None:intergenic | 45.0% | |
| CCATAGTTGTATCCACTGAG+AGG | - | chr5.3:78860871-78860890 | None:intergenic | 45.0% | |
| CCTCTCAGTGGATACAACTA+TGG | + | chr5.3:78860868-78860887 | MS.gene38190:CDS | 45.0% | |
| CTGTCAGTGGTTATGGACTT+CGG | + | chr5.3:78860947-78860966 | MS.gene38190:CDS | 45.0% | |
| GCACCATTTGGATCTGGTTA+TGG | + | chr5.3:78861015-78861034 | MS.gene38190:CDS | 45.0% | |
| GCATACATTGGATCAGGAAG+TGG | + | chr5.3:78861279-78861298 | MS.gene38190:CDS | 45.0% | |
| GCATTTGCACCATTTGGATC+TGG | + | chr5.3:78861009-78861028 | MS.gene38190:CDS | 45.0% | |
| GTCTTAGCAGAAACATCCGA+AGG | - | chr5.3:78861639-78861658 | None:intergenic | 45.0% | |
| GTTCAGTGACTCGAAACTTG+TGG | + | chr5.3:78861211-78861230 | MS.gene38190:CDS | 45.0% | |
| GTTTCTGCTAAGACTTCTCC+CGG | + | chr5.3:78861645-78861664 | MS.gene38190:CDS | 45.0% | |
| TATAAATCACAAGGGGGGGT+GGG | - | chr5.3:78860465-78860484 | None:intergenic | 45.0% | |
| TCAGTGACTCGAAACTTGTG+GGG | + | chr5.3:78861213-78861232 | MS.gene38190:CDS | 45.0% | |
| TCGAGTCACTGAACTGAAGA+AGG | - | chr5.3:78861205-78861224 | None:intergenic | 45.0% | |
| TGAAGATGTTGGTGCAAGAG+TGG | - | chr5.3:78861475-78861494 | None:intergenic | 45.0% | |
| TGATGAGCTCCAGTTAAGGA+CGG | - | chr5.3:78860248-78860267 | None:intergenic | 45.0% | |
| TGGCAATCTTAGCTATGGAC+GGG | + | chr5.3:78861098-78861117 | MS.gene38190:CDS | 45.0% | |
| TGTCAGTGGTTATGGACTTC+GGG | + | chr5.3:78860948-78860967 | MS.gene38190:CDS | 45.0% | |
| TTGGCAATACTGGAGTCAAC+TGG | + | chr5.3:78861322-78861341 | MS.gene38190:CDS | 45.0% | |
| TTTGCATTCCCTCCAAAACC+AGG | - | chr5.3:78861072-78861091 | None:intergenic | 45.0% | |
| ! | AGAAGCACAACATCGATGGA+AGG | + | chr5.3:78860049-78860068 | MS.gene38190:CDS | 45.0% |
| ! | CAAGAGAAGCACAACATCGA+TGG | + | chr5.3:78860045-78860064 | MS.gene38190:CDS | 45.0% |
| ! | CCAAGTACTGTCAGTGGTTA+TGG | + | chr5.3:78860940-78860959 | MS.gene38190:CDS | 45.0% |
| ! | GGTAGTGGCAATCTTGGATA+TGG | + | chr5.3:78861393-78861412 | MS.gene38190:CDS | 45.0% |
| ! | TTCTGAAGAAGCTGTTGACC+AGG | + | chr5.3:78860753-78860772 | MS.gene38190:CDS | 45.0% |
| ! | TTGAATTCGGGTTCTACCGA+AGG | + | chr5.3:78860220-78860239 | MS.gene38190:intron | 45.0% |
| !! | GGATATGAAAGTGGTAACGG+AGG | + | chr5.3:78861171-78861190 | MS.gene38190:CDS | 45.0% |
| !! | GTTATGGATTGGGGACTGAA+GGG | + | chr5.3:78861430-78861449 | MS.gene38190:CDS | 45.0% |
| !! | TGGTTGATGAGCTCCAGTTA+AGG | - | chr5.3:78860252-78860271 | None:intergenic | 45.0% |
| !! | TGTCCCCTCTTTTAAGTCCA+TGG | + | chr5.3:78860089-78860108 | MS.gene38190:intron | 45.0% |
| !!! | GTTTGAGTCCTGGTTTTGGA+GGG | + | chr5.3:78861061-78861080 | MS.gene38190:CDS | 45.0% |
| !! | AAAATAATAATGAAAATAAA+AGG | - | chr5.3:78860421-78860440 | None:intergenic | 5.0% |
| ACTCGAAACTTGTGGGGGAA+TGG | + | chr5.3:78861219-78861238 | MS.gene38190:CDS | 50.0% | |
| ACTGGTAGAGCTCGTGGATT+TGG | + | chr5.3:78859979-78859998 | MS.gene38190:CDS | 50.0% | |
| ACTTCATCAGCGGCTCCAAT+AGG | + | chr5.3:78861133-78861152 | MS.gene38190:CDS | 50.0% | |
| ACTTCTCCCGGTTATGTTGG+TGG | + | chr5.3:78861657-78861676 | MS.gene38190:CDS | 50.0% | |
| AGAGATGGATCTGGTCCCTT+CGG | + | chr5.3:78861594-78861613 | MS.gene38190:CDS | 50.0% | |
| AGGCGAAGAAAGCTGTTCCT+AGG | + | chr5.3:78860515-78860534 | MS.gene38190:CDS | 50.0% | |
| ATAAATCACAAGGGGGGGTG+GGG | - | chr5.3:78860464-78860483 | None:intergenic | 50.0% | |
| ATCAGCGGCTCCAATAGGTT+TGG | + | chr5.3:78861138-78861157 | MS.gene38190:CDS | 50.0% | |
| CAGTGACTCGAAACTTGTGG+GGG | + | chr5.3:78861214-78861233 | MS.gene38190:CDS | 50.0% | |
| CCAAAACCAGGACTCAAACC+AGG | - | chr5.3:78861060-78861079 | None:intergenic | 50.0% | |
| CCAGTTAAGGACGGATCCTT+CGG | - | chr5.3:78860239-78860258 | None:intergenic | 50.0% | |
| CTATAAATCACAAGGGGGGG+TGG | - | chr5.3:78860466-78860485 | None:intergenic | 50.0% | |
| GCACAACATCGATGGAAGGA+TGG | + | chr5.3:78860053-78860072 | MS.gene38190:CDS | 50.0% | |
| GGAGGGAACAATGTGTCACA+GGG | + | chr5.3:78861372-78861391 | MS.gene38190:CDS | 50.0% | |
| GGAGGTGGCAACAATGGTTA+TGG | + | chr5.3:78861414-78861433 | MS.gene38190:CDS | 50.0% | |
| GGATATGGAGGTGGCAACAA+TGG | + | chr5.3:78861408-78861427 | MS.gene38190:CDS | 50.0% | |
| GGATCAGGAAGTGGGAATGT+TGG | + | chr5.3:78861288-78861307 | MS.gene38190:CDS | 50.0% | |
| GGCAATCTTAGCTATGGACG+GGG | + | chr5.3:78861099-78861118 | MS.gene38190:CDS | 50.0% | |
| GGCAATCTTGGATATGGAGG+TGG | + | chr5.3:78861399-78861418 | MS.gene38190:CDS | 50.0% | |
| GGCGAAGAAAGCTGTTCCTA+GGG | + | chr5.3:78860516-78860535 | MS.gene38190:CDS | 50.0% | |
| GGGAATGGAAGCCTCAACTA+TGG | + | chr5.3:78861234-78861253 | MS.gene38190:CDS | 50.0% | |
| GTTCCTAAGGAGTTATCCCC+AGG | + | chr5.3:78860832-78860851 | MS.gene38190:CDS | 50.0% | |
| TCAGGAAGTGGGAATGTTGG+AGG | + | chr5.3:78861291-78861310 | MS.gene38190:CDS | 50.0% | |
| TGTATCCACTGAGAGGAGAG+CGG | - | chr5.3:78860864-78860883 | None:intergenic | 50.0% | |
| TTGGAGCCGCTGATGAAGTA+AGG | - | chr5.3:78861132-78861151 | None:intergenic | 50.0% | |
| ! | GAAGGGTATGGAAGAAGCAG+TGG | + | chr5.3:78861447-78861466 | MS.gene38190:CDS | 50.0% |
| ! | TCACAGGGTAGTGGCAATCT+TGG | + | chr5.3:78861387-78861406 | MS.gene38190:CDS | 50.0% |
| ! | TTTGAGCCTGGTTTGAGTCC+TGG | + | chr5.3:78861051-78861070 | MS.gene38190:CDS | 50.0% |
| !! | CCTGGTTTGAGTCCTGGTTT+TGG | + | chr5.3:78861057-78861076 | MS.gene38190:CDS | 50.0% |
| !! | CTTCGCCGATTTCTGGACAT+GGG | + | chr5.3:78861349-78861368 | MS.gene38190:CDS | 50.0% |
| !! | GGTTATGGATTGGGGACTGA+AGG | + | chr5.3:78861429-78861448 | MS.gene38190:CDS | 50.0% |
| !! | TCTTCGCCGATTTCTGGACA+TGG | + | chr5.3:78861348-78861367 | MS.gene38190:CDS | 50.0% |
| !! | TGGAGTTCTTCGCCGATTTC+TGG | + | chr5.3:78861342-78861361 | MS.gene38190:CDS | 50.0% |
| !! | TTCGCCGATTTCTGGACATG+GGG | + | chr5.3:78861350-78861369 | MS.gene38190:CDS | 50.0% |
| !!! | GGTTTGAGTCCTGGTTTTGG+AGG | + | chr5.3:78861060-78861079 | MS.gene38190:CDS | 50.0% |
| ACTCAGAGGCCAAGAGGCTT+TGG | + | chr5.3:78860715-78860734 | MS.gene38190:CDS | 55.0% | |
| AGAACTAGCGGCAGCATCCA+TGG | + | chr5.3:78860559-78860578 | MS.gene38190:CDS | 55.0% | |
| ATCCATGGTTCTCCTGGTCC+AGG | + | chr5.3:78860574-78860593 | MS.gene38190:CDS | 55.0% | |
| ATGGACTTCGGGTGGATGGT+AGG | + | chr5.3:78860959-78860978 | MS.gene38190:CDS | 55.0% | |
| CACAACACTCAGAGGCCAAG+AGG | + | chr5.3:78860709-78860728 | MS.gene38190:CDS | 55.0% | |
| CAGTGGTTATGGACTTCGGG+TGG | + | chr5.3:78860951-78860970 | MS.gene38190:CDS | 55.0% | |
| CCACCAAGTCCGTAACCGAA+GGG | - | chr5.3:78861612-78861631 | None:intergenic | 55.0% | |
| CCGAAGGATCCGTCCTTAAC+TGG | + | chr5.3:78860236-78860255 | MS.gene38190:intron | 55.0% | |
| CCTCCCCCATGTCCAGAAAT+CGG | - | chr5.3:78861357-78861376 | None:intergenic | 55.0% | |
| GGATCTGGTCCCTTCGGTTA+CGG | + | chr5.3:78861600-78861619 | MS.gene38190:CDS | 55.0% | |
| GGATTGGGGACTGAAGGGTA+TGG | + | chr5.3:78861435-78861454 | MS.gene38190:CDS | 55.0% | |
| GGGAGGGAACAATGTGTCAC+AGG | + | chr5.3:78861371-78861390 | MS.gene38190:CDS | 55.0% | |
| GGTCAAGCGAGCAGTTCCTA+AGG | + | chr5.3:78860819-78860838 | MS.gene38190:CDS | 55.0% | |
| GGTCCTGGGGATAACTCCTT+AGG | - | chr5.3:78860838-78860857 | None:intergenic | 55.0% | |
| GGTGGATGGTAGGTTCAGTC+CGG | + | chr5.3:78860969-78860988 | MS.gene38190:CDS | 55.0% | |
| GGTTATGGACTTCGGGTGGA+TGG | + | chr5.3:78860955-78860974 | MS.gene38190:CDS | 55.0% | |
| GTATCCACTGAGAGGAGAGC+GGG | - | chr5.3:78860863-78860882 | None:intergenic | 55.0% | |
| TAAATCACAAGGGGGGGTGG+GGG | - | chr5.3:78860463-78860482 | None:intergenic | 55.0% | |
| ! | CGATTTCTGGACATGGGGGA+GGG | + | chr5.3:78861355-78861374 | MS.gene38190:CDS | 55.0% |
| ! | TTTCGAGTACGACCTGGACC+AGG | - | chr5.3:78860589-78860608 | None:intergenic | 55.0% |
| !! | TCAAATGGTGGCGGTGTCGA+TGG | + | chr5.3:78861504-78861523 | MS.gene38190:CDS | 55.0% |
| !! | TCGCCGATTTCTGGACATGG+GGG | + | chr5.3:78861351-78861370 | MS.gene38190:CDS | 55.0% |
| AAATCACAAGGGGGGGTGGG+GGG | - | chr5.3:78860462-78860481 | None:intergenic | 60.0% | |
| AGGTTCAGTCCGGTTGCTGG+TGG | + | chr5.3:78860979-78860998 | MS.gene38190:CDS | 60.0% | |
| CCCTTCGGTTACGGACTTGG+TGG | + | chr5.3:78861609-78861628 | MS.gene38190:CDS | 60.0% | |
| CGGACAACTGGTAGAGCTCG+TGG | + | chr5.3:78859973-78859992 | MS.gene38190:CDS | 60.0% | |
| CGGTCTATGGGGACACCACT+TGG | + | chr5.3:78861553-78861572 | MS.gene38190:CDS | 60.0% | |
| GACCTGGACCAGGAGAACCA+TGG | - | chr5.3:78860579-78860598 | None:intergenic | 60.0% | |
| GCATTTCGGCCACCAGCAAC+CGG | - | chr5.3:78860991-78861010 | None:intergenic | 60.0% | |
| GCCACCAAGTCCGTAACCGA+AGG | - | chr5.3:78861613-78861632 | None:intergenic | 60.0% | |
| GGCAGCATCCATGGTTCTCC+TGG | + | chr5.3:78860568-78860587 | MS.gene38190:CDS | 60.0% | |
| GGTAGGTTCAGTCCGGTTGC+TGG | + | chr5.3:78860976-78860995 | MS.gene38190:CDS | 60.0% | |
| GGTCCCTTCGGTTACGGACT+TGG | + | chr5.3:78861606-78861625 | MS.gene38190:CDS | 60.0% | |
| ! | CCGATTTCTGGACATGGGGG+AGG | + | chr5.3:78861354-78861373 | MS.gene38190:CDS | 60.0% |
| AGAGGAGAGCGGGTAGGTCC+TGG | - | chr5.3:78860853-78860872 | None:intergenic | 65.0% | |
| AGGAGAGCGGGTAGGTCCTG+GGG | - | chr5.3:78860851-78860870 | None:intergenic | 65.0% | |
| CCACTGAGAGGAGAGCGGGT+AGG | - | chr5.3:78860859-78860878 | None:intergenic | 65.0% | |
| CCTACCCGCTCTCCTCTCAG+TGG | + | chr5.3:78860856-78860875 | MS.gene38190:CDS | 65.0% | |
| GAGGAGAGCGGGTAGGTCCT+GGG | - | chr5.3:78860852-78860871 | None:intergenic | 65.0% | |
| !! | CGGACTTGGTGGCGCACCTT+CGG | + | chr5.3:78861620-78861639 | MS.gene38190:CDS | 65.0% |
| CACAAGGGGGGGTGGGGGGA+AGG | - | chr5.3:78860458-78860477 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 78859853 | 78861767 | 78859853 | ID=MS.gene38190 |
| chr5.3 | mRNA | 78859853 | 78861767 | 78859853 | ID=MS.gene38190.t1;Parent=MS.gene38190 |
| chr5.3 | exon | 78859853 | 78860074 | 78859853 | ID=MS.gene38190.t1.exon1;Parent=MS.gene38190.t1 |
| chr5.3 | CDS | 78859853 | 78860074 | 78859853 | ID=cds.MS.gene38190.t1;Parent=MS.gene38190.t1 |
| chr5.3 | exon | 78860511 | 78861767 | 78860511 | ID=MS.gene38190.t1.exon2;Parent=MS.gene38190.t1 |
| chr5.3 | CDS | 78860511 | 78861767 | 78860511 | ID=cds.MS.gene38190.t1;Parent=MS.gene38190.t1 |
| Gene Sequence |
| Protein sequence |
