AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02129

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02129.t1 MTR_8g043650 89.873 237 24 0 1 237 1 237 8.91e-161 444
MS.gene02129.t1 MTR_1g105920 92.237 219 17 0 1 219 1 219 6.45e-153 424
MS.gene02129.t1 MTR_1g105910 89.451 237 25 0 1 237 1 237 1.18e-152 424
MS.gene02129.t1 MTR_2g030740 90.717 237 22 0 1 237 1 237 3.69e-150 417
MS.gene02129.t1 MTR_1g012570 89.451 237 25 0 1 237 1 237 1.03e-146 409
MS.gene02129.t1 MTR_3g052920 87.671 219 27 0 1 219 1 219 1.64e-145 405
MS.gene02129.t1 MTR_1g105905 83.182 220 37 0 18 237 1 220 3.25e-137 384
MS.gene02129.t1 MTR_3g052870 82.192 219 20 1 1 219 1 200 1.54e-128 362
MS.gene02129.t1 MTR_3g030770 75.745 235 39 3 1 225 1 227 5.08e-125 353
MS.gene02129.t1 MTR_1g108510 75.745 235 39 3 1 225 1 227 1.93e-124 352
MS.gene02129.t1 MTR_0121s0080 72.574 237 64 1 1 237 1 236 6.36e-124 351
MS.gene02129.t1 MTR_1g077360 72.000 225 63 0 1 225 1 225 1.92e-121 345
MS.gene02129.t1 MTR_2g093190 74.468 235 42 3 1 225 1 227 1.04e-120 343
MS.gene02129.t1 MTR_1g106070 90.110 182 18 0 1 182 1 182 3.54e-120 340
MS.gene02129.t1 MTR_5g055100 67.511 237 77 0 1 237 1 237 4.45e-120 342
MS.gene02129.t1 MTR_1g075600 72.000 225 63 0 1 225 1 225 8.77e-120 341
MS.gene02129.t1 MTR_2g085280 67.797 236 76 0 1 236 1 236 1.01e-119 340
MS.gene02129.t1 MTR_2g085250 67.797 236 76 0 1 236 1 236 2.59e-119 340
MS.gene02129.t1 MTR_5g045560 71.308 237 68 0 1 237 1 237 2.64e-118 337
MS.gene02129.t1 MTR_1g108580 72.340 235 47 3 1 225 1 227 7.66e-117 333
MS.gene02129.t1 MTR_5g053390 69.333 225 69 0 1 225 1 225 6.07e-114 326
MS.gene02129.t1 MTR_7g062350 66.816 223 72 2 16 237 27 248 6.58e-102 296
MS.gene02129.t1 MTR_1g075570 66.292 178 46 1 18 195 1 164 3.74e-73 220
MS.gene02129.t1 MTR_0121s0100 78.906 128 27 0 1 128 1 128 6.42e-69 208
MS.gene02129.t1 MTR_3g080940 51.832 191 88 1 7 193 7 197 3.43e-66 204
MS.gene02129.t1 MTR_3g030780 75.194 129 32 0 1 129 1 129 7.79e-65 197
MS.gene02129.t1 MTR_3g067910 68.627 102 32 0 21 122 2 103 2.69e-46 150
MS.gene02129.t1 MTR_2g105290 39.766 171 93 2 5 172 8 171 1.07e-40 137
MS.gene02129.t1 MTR_8g086290 41.566 166 87 2 5 167 8 166 2.83e-40 137
MS.gene02129.t1 MTR_7g028448 45.161 155 73 3 5 159 8 150 8.10e-35 122
MS.gene02129.t1 MTR_4g036915 45.161 155 73 3 5 159 8 150 8.10e-35 122
MS.gene02129.t1 MTR_1g108500 59.292 113 23 2 8 118 94 185 1.04e-31 119
MS.gene02129.t1 MTR_4g127140 37.500 184 95 4 5 175 8 184 7.04e-31 112
MS.gene02129.t1 MTR_3g067875 83.929 56 9 0 18 73 1 56 2.19e-27 100
MS.gene02129.t1 MTR_3g067915 51.064 94 46 0 33 126 3 96 5.35e-25 95.1
MS.gene02129.t1 MTR_1g047550 62.319 69 26 0 9 77 2 70 9.74e-25 96.7
MS.gene02129.t1 MTR_8g079502 62.319 69 26 0 9 77 2 70 2.31e-24 95.9
MS.gene02129.t1 MTR_4g131030 40.517 116 54 2 9 109 2 117 9.21e-24 95.1
MS.gene02129.t1 MTR_8g051580 46.535 101 52 1 9 109 2 100 1.01e-23 94.4
MS.gene02129.t1 MTR_1g054265 46.535 101 52 1 9 109 2 100 1.26e-23 93.6
MS.gene02129.t1 MTR_1g063160 48.544 103 51 2 9 109 2 104 1.32e-23 94.0
MS.gene02129.t1 MTR_3g067870 69.841 63 19 0 16 78 83 145 1.91e-23 92.8
MS.gene02129.t1 MTR_8g046350 42.982 114 58 2 9 122 2 108 3.73e-23 92.0
MS.gene02129.t1 MTR_4g094632 40.708 113 64 2 9 120 2 112 1.04e-20 85.5
MS.gene02129.t1 MTR_4g093970 33.939 165 86 3 10 153 29 191 3.26e-19 83.6
MS.gene02129.t1 MTR_3g005530 52.941 68 32 0 9 76 2 69 3.77e-19 83.2
MS.gene02129.t1 MTR_3g452380 42.453 106 51 1 3 108 11 106 7.22e-19 82.8
MS.gene02129.t1 MTR_8g033220 30.303 231 117 6 10 220 3 209 8.12e-19 82.4
MS.gene02129.t1 MTR_8g033220 30.303 231 117 6 10 220 3 209 8.24e-19 82.4
MS.gene02129.t1 MTR_4g094638 41.509 106 61 1 9 113 2 107 1.24e-18 80.9
MS.gene02129.t1 MTR_4g102530 50.685 73 36 0 10 82 3 75 2.29e-18 80.5
MS.gene02129.t1 MTR_1g053070 49.383 81 41 0 9 89 2 82 2.40e-18 81.6
MS.gene02129.t1 MTR_5g032520 29.108 213 127 6 9 201 2 210 3.83e-18 80.5
MS.gene02129.t1 MTR_2g017865 30.270 185 100 4 9 167 17 198 8.27e-18 80.1
MS.gene02129.t1 MTR_5g066180 51.471 68 33 0 9 76 2 69 1.30e-17 79.0
MS.gene02129.t1 MTR_8g022970 33.544 158 92 3 8 159 17 167 1.39e-17 78.2
MS.gene02129.t1 MTR_8g033270 51.471 68 33 0 9 76 2 69 1.96e-17 79.0
MS.gene02129.t1 MTR_8g087860 51.471 68 33 0 9 76 18 85 3.27e-17 78.2
MS.gene02129.t1 MTR_3g102570 42.308 104 57 3 9 111 2 103 4.15e-17 79.3
MS.gene02129.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 8.75e-17 75.9
MS.gene02129.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 1.08e-16 77.0
MS.gene02129.t1 MTR_4g109830 47.826 69 35 1 9 76 2 70 1.17e-16 76.6
MS.gene02129.t1 MTR_7g075870 38.182 110 66 1 10 119 3 110 1.47e-16 75.9
MS.gene02129.t1 MTR_5g032150 48.529 68 35 0 9 76 2 69 1.59e-16 76.3
MS.gene02129.t1 MTR_2g009890 48.529 68 35 0 9 76 2 69 2.74e-16 76.3
MS.gene02129.t1 MTR_0003s0590 51.471 68 33 0 9 76 2 69 4.44e-16 75.5
MS.gene02129.t1 MTR_6g015975 49.275 69 34 1 9 76 2 70 1.10e-15 74.3
MS.gene02129.t1 MTR_7g016600 49.275 69 34 1 9 76 2 70 1.16e-15 74.3
MS.gene02129.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.17e-15 73.6
MS.gene02129.t1 MTR_4g084740 47.368 76 38 2 9 83 2 76 1.18e-15 75.1
MS.gene02129.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.25e-15 73.9
MS.gene02129.t1 MTR_3g437790 34.266 143 77 4 26 159 30 164 1.44e-15 72.8
MS.gene02129.t1 MTR_8g066260 40.964 83 46 1 9 91 2 81 1.63e-15 73.6
MS.gene02129.t1 MTR_2g461710 55.357 56 25 0 9 64 2 57 1.76e-15 68.9
MS.gene02129.t1 MTR_5g046790 45.070 71 36 1 9 79 2 69 2.79e-15 72.4
MS.gene02129.t1 MTR_7g075870 37.838 111 66 2 10 119 3 111 2.94e-15 72.4
MS.gene02129.t1 MTR_7g016630 27.477 222 129 6 9 207 2 214 4.48e-15 72.8
MS.gene02129.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 5.27e-15 72.0
MS.gene02129.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 5.30e-15 72.0
MS.gene02129.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 5.45e-15 69.3
MS.gene02129.t1 MTR_4g109810 29.268 246 129 13 9 230 2 226 9.19e-15 71.6
MS.gene02129.t1 MTR_5g066960 49.123 57 29 0 9 65 2 58 2.18e-14 66.2
MS.gene02129.t1 MTR_1g038300 47.143 70 35 1 9 76 2 71 2.62e-14 70.1
MS.gene02129.t1 MTR_3g109930 31.429 140 80 3 27 159 20 150 2.77e-14 68.9
MS.gene02129.t1 MTR_3g088615 44.286 70 37 1 9 76 2 71 3.02e-14 68.9
MS.gene02129.t1 MTR_7g075850 45.714 70 36 1 9 76 2 71 4.44e-14 69.7
MS.gene02129.t1 MTR_1g029670 46.970 66 34 1 9 74 2 66 5.25e-14 68.2
MS.gene02129.t1 MTR_8g097090 46.377 69 36 1 9 76 2 70 5.99e-14 69.3
MS.gene02129.t1 MTR_3g084980 55.357 56 25 0 9 64 2 57 6.33e-14 69.3
MS.gene02129.t1 MTR_3g113030 47.619 63 33 0 9 71 2 64 2.04e-13 67.8
MS.gene02129.t1 MTR_4g108720 29.545 176 102 9 9 172 2 167 6.47e-13 67.4
MS.gene02129.t1 MTR_4g051538 30.097 206 127 5 5 208 5 195 1.06e-12 65.9
MS.gene02129.t1 MTR_4g093030 41.892 74 43 0 9 82 2 75 2.61e-12 63.2
MS.gene02129.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 2.26e-11 60.8
MS.gene02129.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 2.52e-11 61.2
MS.gene02129.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 2.57e-11 61.2
MS.gene02129.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 2.78e-11 61.2
MS.gene02129.t1 MTR_1g041615 35.514 107 60 2 20 125 17 115 7.88e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02129.t1 AT5G60440 55.319 188 77 3 5 189 3 186 1.11e-63 201
MS.gene02129.t1 AT2G24840 50.610 164 70 4 6 163 60 218 2.57e-45 152
MS.gene02129.t1 AT1G65360 39.556 225 125 6 5 225 3 220 3.00e-42 143
MS.gene02129.t1 AT1G01530 43.158 190 100 3 4 192 2 184 5.54e-42 143
MS.gene02129.t1 AT4G36590 46.296 162 81 2 5 160 3 164 1.27e-39 137
MS.gene02129.t1 AT2G34440 45.299 117 55 2 9 121 2 113 4.69e-27 102
MS.gene02129.t1 AT3G66656 42.748 131 70 2 9 134 2 132 1.52e-26 101
MS.gene02129.t1 AT3G04100 33.333 168 96 4 2 159 7 168 3.24e-26 101
MS.gene02129.t1 AT1G72350 34.211 152 67 3 9 160 43 161 2.22e-22 91.7
MS.gene02129.t1 AT1G28460 29.586 169 115 2 5 169 4 172 2.80e-20 85.1
MS.gene02129.t1 AT4G22950 50.000 76 38 0 10 85 3 78 1.87e-19 82.8
MS.gene02129.t1 AT4G09960 46.512 86 45 1 9 93 2 87 2.59e-19 83.6
MS.gene02129.t1 AT4G09960 46.512 86 45 1 9 93 2 87 2.88e-19 83.6
MS.gene02129.t1 AT4G09960 46.512 86 45 1 9 93 3 88 3.06e-19 83.6
MS.gene02129.t1 AT1G29962 29.651 172 114 4 5 169 4 175 3.95e-19 82.4
MS.gene02129.t1 AT4G09960 46.512 86 45 1 9 93 12 97 4.36e-19 83.6
MS.gene02129.t1 AT4G22950 40.909 110 62 1 10 119 3 109 4.41e-19 82.8
MS.gene02129.t1 AT4G22950 40.909 110 62 1 10 119 3 109 4.41e-19 82.8
MS.gene02129.t1 AT4G09960 46.512 86 45 1 9 93 28 113 5.69e-19 83.6
MS.gene02129.t1 AT2G45660 33.929 168 83 6 10 162 3 157 6.68e-19 80.9
MS.gene02129.t1 AT2G45650 52.941 68 32 0 9 76 2 69 9.37e-19 82.8
MS.gene02129.t1 AT4G09960 46.512 86 45 1 9 93 97 182 1.62e-18 83.2
MS.gene02129.t1 AT2G45660 52.941 68 32 0 10 77 3 70 2.18e-18 80.9
MS.gene02129.t1 AT2G22540 39.130 138 64 5 9 132 2 133 4.76e-18 80.5
MS.gene02129.t1 AT2G22540 39.130 138 64 5 9 132 2 133 4.76e-18 80.5
MS.gene02129.t1 AT4G18960 42.308 104 49 2 5 108 15 107 6.66e-18 80.5
MS.gene02129.t1 AT2G42830 47.368 76 40 0 1 76 9 84 3.04e-17 78.6
MS.gene02129.t1 AT3G57230 47.059 68 36 0 9 76 2 69 3.15e-17 76.3
MS.gene02129.t1 AT5G51870 53.731 67 31 0 10 76 3 69 3.18e-17 77.0
MS.gene02129.t1 AT3G61120 51.471 68 33 0 9 76 2 69 3.46e-17 78.2
MS.gene02129.t1 AT2G42830 47.368 76 40 0 1 76 9 84 3.47e-17 78.6
MS.gene02129.t1 AT5G51870 53.731 67 31 0 10 76 3 69 3.85e-17 77.4
MS.gene02129.t1 AT3G58780 50.704 71 35 0 6 76 14 84 3.96e-17 78.2
MS.gene02129.t1 AT3G58780 50.704 71 35 0 6 76 20 90 4.15e-17 78.2
MS.gene02129.t1 AT4G24540 51.471 68 33 0 9 76 2 69 4.53e-17 77.4
MS.gene02129.t1 AT5G51870 50.000 72 36 0 5 76 21 92 6.10e-17 76.6
MS.gene02129.t1 AT5G51870 53.731 67 31 0 10 76 3 69 7.35e-17 77.0
MS.gene02129.t1 AT3G58780 50.704 71 35 0 6 76 14 84 7.83e-17 77.8
MS.gene02129.t1 AT4G37940 48.529 68 35 0 9 76 2 69 8.26e-17 76.6
MS.gene02129.t1 AT5G51870 53.731 67 31 0 10 76 13 79 8.89e-17 77.0
MS.gene02129.t1 AT4G37940 48.529 68 35 0 9 76 2 69 8.92e-17 77.0
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 9.14e-17 73.9
MS.gene02129.t1 AT1G22130 37.143 105 65 1 9 112 2 106 9.51e-17 78.6
MS.gene02129.t1 AT4G37940 48.529 68 35 0 9 76 2 69 9.67e-17 75.5
MS.gene02129.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.08e-16 75.5
MS.gene02129.t1 AT3G57390 50.000 68 34 0 9 76 2 69 1.10e-16 76.6
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.36e-16 74.7
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.36e-16 74.7
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.36e-16 74.7
MS.gene02129.t1 AT1G77980 38.095 105 64 1 9 112 2 106 1.39e-16 77.8
MS.gene02129.t1 AT5G13790 43.011 93 44 1 9 101 2 85 1.53e-16 77.0
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.58e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.58e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.58e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.58e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.58e-16 74.3
MS.gene02129.t1 AT3G57230 47.059 68 36 0 9 76 2 69 1.69e-16 76.3
MS.gene02129.t1 AT3G57230 47.059 68 36 0 9 76 2 69 1.69e-16 76.3
MS.gene02129.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.71e-16 75.1
MS.gene02129.t1 AT1G28450 27.586 174 116 4 5 168 4 177 1.78e-16 75.1
MS.gene02129.t1 AT5G13790 51.471 68 33 0 9 76 2 69 1.85e-16 76.6
MS.gene02129.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.99e-16 75.1
MS.gene02129.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.99e-16 75.1
MS.gene02129.t1 AT3G57390 50.000 68 34 0 9 76 2 69 2.29e-16 76.3
MS.gene02129.t1 AT1G17310 53.165 79 35 1 8 86 47 123 3.33e-16 75.1
MS.gene02129.t1 AT4G11880 48.611 72 36 1 10 80 3 74 3.38e-16 74.3
MS.gene02129.t1 AT4G11880 48.611 72 36 1 10 80 3 74 3.38e-16 74.3
MS.gene02129.t1 AT3G30260 29.697 165 98 4 9 172 2 149 3.55e-16 75.5
MS.gene02129.t1 AT5G51860 52.239 67 32 0 10 76 3 69 3.88e-16 74.7
MS.gene02129.t1 AT1G17310 53.165 79 35 1 8 86 58 134 3.99e-16 75.1
MS.gene02129.t1 AT2G22630 47.059 68 36 0 9 76 2 69 4.58e-16 75.1
MS.gene02129.t1 AT2G22630 47.059 68 36 0 9 76 2 69 4.58e-16 75.1
MS.gene02129.t1 AT1G69120 40.659 91 51 1 9 99 2 89 4.67e-16 75.1
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.28e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.28e-16 74.3
MS.gene02129.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.38e-16 75.1
MS.gene02129.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.38e-16 75.1
MS.gene02129.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.38e-16 75.1
MS.gene02129.t1 AT1G77950 46.053 76 39 2 9 83 2 76 5.38e-16 75.1
MS.gene02129.t1 AT5G51860 52.239 67 32 0 10 76 3 69 5.59e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.85e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.85e-16 74.3
MS.gene02129.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.85e-16 74.3
MS.gene02129.t1 AT5G60910 49.296 71 33 1 9 79 2 69 6.92e-16 74.7
MS.gene02129.t1 AT4G11880 48.611 72 36 1 10 80 3 74 7.05e-16 74.3
MS.gene02129.t1 AT4G11880 48.611 72 36 1 10 80 3 74 7.05e-16 74.3
MS.gene02129.t1 AT1G69120 40.659 91 51 1 9 99 2 89 9.89e-16 74.7
MS.gene02129.t1 AT1G26310 47.826 69 35 1 9 76 2 70 1.06e-15 74.3
MS.gene02129.t1 AT2G22540 38.406 138 60 6 9 132 2 128 1.43e-15 73.6
MS.gene02129.t1 AT3G54340 47.143 70 35 1 9 76 2 71 1.54e-15 73.6
MS.gene02129.t1 AT5G15800 49.275 69 34 1 9 76 2 70 2.43e-15 73.6
MS.gene02129.t1 AT5G15800 49.275 69 34 1 9 76 2 70 3.86e-15 73.2
MS.gene02129.t1 AT2G14210 46.377 69 36 1 9 76 2 70 3.95e-15 72.4
MS.gene02129.t1 AT5G20240 47.143 70 35 1 9 76 2 71 4.00e-15 70.9
MS.gene02129.t1 AT2G14210 46.377 69 36 1 9 76 2 70 5.27e-15 72.0
MS.gene02129.t1 AT5G20240 47.143 70 35 1 9 76 2 71 6.21e-15 71.6
MS.gene02129.t1 AT5G23260 44.681 94 44 3 5 90 12 105 1.23e-14 71.6
MS.gene02129.t1 AT5G65050 46.377 69 36 1 9 76 2 70 1.24e-14 70.1
MS.gene02129.t1 AT5G23260 44.681 94 44 3 5 90 12 105 1.26e-14 71.6
MS.gene02129.t1 AT3G02310 47.826 69 35 1 9 76 2 70 1.59e-14 70.1
MS.gene02129.t1 AT3G58780 52.459 61 29 0 6 66 14 74 1.88e-14 70.9
MS.gene02129.t1 AT5G23260 44.318 88 43 2 9 90 2 89 2.00e-14 70.9
MS.gene02129.t1 AT5G23260 44.318 88 43 2 9 90 2 89 2.04e-14 70.5
MS.gene02129.t1 AT5G65050 46.377 69 36 1 9 76 2 70 2.17e-14 69.7
MS.gene02129.t1 AT3G58780 52.459 61 29 0 6 66 14 74 2.53e-14 70.9
MS.gene02129.t1 AT5G65050 46.377 69 36 1 9 76 2 70 2.65e-14 69.7
MS.gene02129.t1 AT5G65050 46.377 69 36 1 9 76 2 70 2.65e-14 69.3
MS.gene02129.t1 AT1G47760 34.483 116 61 3 9 123 2 103 2.78e-14 69.3
MS.gene02129.t1 AT2G03710 53.571 56 26 0 9 64 2 57 3.76e-14 68.9
MS.gene02129.t1 AT5G65060 46.377 69 36 1 9 76 2 70 4.25e-14 68.9
MS.gene02129.t1 AT1G24260 41.237 97 54 1 9 105 2 95 4.66e-14 69.7
MS.gene02129.t1 AT5G65060 46.377 69 36 1 9 76 2 70 5.02e-14 68.6
MS.gene02129.t1 AT3G02310 47.826 69 35 1 9 76 2 70 5.04e-14 69.7
MS.gene02129.t1 AT5G65060 46.377 69 36 1 9 76 2 70 5.74e-14 68.6
MS.gene02129.t1 AT1G24260 28.514 249 140 10 9 234 2 235 6.61e-14 69.3
MS.gene02129.t1 AT1G24260 46.377 69 36 1 9 76 2 70 8.22e-14 69.3
MS.gene02129.t1 AT2G03710 47.143 70 35 2 9 76 2 71 8.94e-14 69.3
MS.gene02129.t1 AT2G03710 47.143 70 35 2 9 76 2 71 9.19e-14 68.9
MS.gene02129.t1 AT1G71692 44.286 70 38 1 9 77 2 71 1.75e-13 67.4
MS.gene02129.t1 AT5G65070 42.029 69 39 1 9 76 2 70 2.38e-13 65.9
MS.gene02129.t1 AT5G65070 42.029 69 39 1 9 76 2 70 4.74e-13 66.2
MS.gene02129.t1 AT5G65070 42.029 69 39 1 9 76 2 70 9.62e-13 65.5
MS.gene02129.t1 AT5G65070 42.029 69 39 1 9 76 2 70 9.73e-13 65.9
MS.gene02129.t1 AT1G18750 38.667 75 44 1 9 81 2 76 3.93e-12 65.5
MS.gene02129.t1 AT1G18750 38.667 75 44 1 9 81 2 76 4.55e-12 65.1
MS.gene02129.t1 AT1G18750 38.667 75 44 1 9 81 2 76 4.87e-12 65.1
MS.gene02129.t1 AT5G65070 47.368 57 30 0 9 65 2 58 5.02e-12 63.9
MS.gene02129.t1 AT1G69540 33.636 110 65 3 9 117 2 104 1.20e-11 63.9
MS.gene02129.t1 AT1G69540 33.636 110 65 3 9 117 2 104 1.35e-11 63.9
MS.gene02129.t1 AT1G46408 36.134 119 67 4 10 119 5 123 1.50e-11 63.2
MS.gene02129.t1 AT4G37435 40.278 72 42 1 9 79 2 73 2.56e-11 61.2
MS.gene02129.t1 AT5G65080 42.029 69 39 1 9 76 9 77 2.58e-11 61.2
MS.gene02129.t1 AT2G26320 40.000 70 40 1 9 76 18 87 3.36e-11 58.9
MS.gene02129.t1 AT2G03060 28.070 171 106 7 9 164 2 170 3.97e-11 62.4
MS.gene02129.t1 AT2G03060 28.070 171 106 7 9 164 2 170 3.97e-11 62.4
MS.gene02129.t1 AT2G03060 28.070 171 106 7 9 164 2 170 3.97e-11 62.4
MS.gene02129.t1 AT2G03060 28.070 171 106 7 9 164 2 170 4.25e-11 62.4
MS.gene02129.t1 AT5G65080 48.148 54 28 0 9 62 9 62 6.98e-11 60.1
MS.gene02129.t1 AT5G27130 40.000 85 47 2 2 82 6 90 7.66e-11 61.2

Find 65 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTTTGGCTTCAACAATA+TGG 0.267060 2.2:-57441897 MS.gene02129:CDS
ATGGGCGGAGGAGGTGGATA+TGG 0.308161 2.2:-57441878 MS.gene02129:CDS
ATCTGAGCTTGTGGAGGATT+TGG 0.314155 2.2:+57441962 None:intergenic
TTGTTGCTCATCATGCTAAT+AGG 0.316248 2.2:-57442069 MS.gene02129:CDS
ATTGCATGGTACCATTGTTT+TGG 0.337688 2.2:+57442305 None:intergenic
AGGCGACTGAGACTCAATTT+TGG 0.339905 2.2:-57442168 MS.gene02129:CDS
TGGTGGGCTTGTCCCGTTGA+TGG 0.374570 2.2:-57442148 MS.gene02129:CDS
ATGTTGCAACCTCATTTGTT+TGG 0.374612 2.2:-57441911 MS.gene02129:CDS
TGCTAATAGGCTTGTAATCC+AGG 0.391884 2.2:-57442056 MS.gene02129:CDS
AACAATATGGGCGGAGGAGG+TGG 0.400658 2.2:-57441884 MS.gene02129:CDS
TTGTTTGGCTTCAACAATAT+GGG 0.407022 2.2:-57441896 MS.gene02129:CDS
TCTTCTCGATGTCCAGTAGT+TGG 0.408924 2.2:+57442221 None:intergenic
ACAAATGAGGTTGCAACATT+GGG 0.423647 2.2:+57441915 None:intergenic
GTCCCGTTGATGGGATGAAT+AGG 0.432754 2.2:-57442138 MS.gene02129:CDS
TCAATGACCGTATCAACATT+GGG 0.433681 2.2:+57442352 None:intergenic
TCCCGTTGATGGGATGAATA+GGG 0.437027 2.2:-57442137 MS.gene02129:CDS
CTTCTTGAATAATTCAAGTT+GGG 0.442228 2.2:+57442114 None:intergenic
AACAAATGAGGTTGCAACAT+TGG 0.442443 2.2:+57441914 None:intergenic
TGAATTATTCAAGAAGGCTC+TGG 0.442548 2.2:-57442107 MS.gene02129:CDS
GTGGAGGATTTGGTTGATGA+TGG 0.460225 2.2:+57441972 None:intergenic
TCTCAGTCGCCTTGCGCAAG+TGG 0.462833 2.2:+57442179 None:intergenic
GCCCTATTCATCCCATCAAC+GGG 0.481029 2.2:+57442136 None:intergenic
TCATTGATCGTTATCTCTCT+CGG 0.486278 2.2:-57442336 MS.gene02129:CDS
GGTGGGCTTGTCCCGTTGAT+GGG 0.493797 2.2:-57442147 MS.gene02129:CDS
AGGCTCGGATCAAAAGAATT+CGG 0.494178 2.2:+57441850 None:intergenic
TTCAACAATATGGGCGGAGG+AGG 0.500330 2.2:-57441887 MS.gene02129:CDS
ATGATGGAGAGGCATGTTAG+AGG 0.501643 2.2:+57441988 None:intergenic
ATCAATGACCGTATCAACAT+TGG 0.508260 2.2:+57442351 None:intergenic
CCTTCTTGAATAATTCAAGT+TGG 0.516494 2.2:+57442113 None:intergenic
ACAGAGGGTGCAAAGCTCAC+TGG 0.525840 2.2:+57442435 None:intergenic
CATTGATCGTTATCTCTCTC+GGG 0.526496 2.2:-57442335 MS.gene02129:CDS
AGTATTGAGCTCGCGCACGT+TGG 0.531885 2.2:+57442261 None:intergenic
GGCTTCAACAATATGGGCGG+AGG 0.534065 2.2:-57441890 MS.gene02129:CDS
GCTCGCGCACGTTGGCGCTA+CGG 0.534754 2.2:+57442269 None:intergenic
CCAACTTGAATTATTCAAGA+AGG 0.535705 2.2:-57442113 MS.gene02129:CDS
GGCCCTATTCATCCCATCAA+CGG 0.536262 2.2:+57442135 None:intergenic
GACTCAGATCAACCAACTAC+TGG 0.537057 2.2:-57442233 MS.gene02129:CDS
TGGCCACCCCAATGTTGATA+CGG 0.545005 2.2:-57442359 MS.gene02129:CDS
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 2.2:-57442471 MS.gene02129:CDS
TTGTTGAAGCCAAACAAATG+AGG 0.561085 2.2:+57441902 None:intergenic
AATGAAAATACCTTCTCTCC+AGG 0.563686 2.2:+57442382 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 2.2:-57442472 MS.gene02129:CDS
GATGGAAACATCTGAGCTTG+TGG 0.573604 2.2:+57441953 None:intergenic
AGTGAGCTTTGCACCCTCTG+TGG 0.587031 2.2:-57442433 MS.gene02129:CDS
AGCAACATCTGCACCACAGA+GGG 0.595144 2.2:+57442420 None:intergenic
CTTCAACCATGTCAAGTGGA+AGG 0.599332 2.2:-57442558 None:intergenic
AGATCTGAGCCACTTGCGCA+AGG 0.599881 2.2:-57442188 MS.gene02129:CDS
TGTGCTTCAACCATGTCAAG+TGG 0.603608 2.2:-57442562 None:intergenic
GGGTTTGAGTAGGAGCACCC+TGG 0.605264 2.2:+57442038 None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 2.2:+57442458 None:intergenic
ATTATTCAAGAAGGCTCTGG+AGG 0.616746 2.2:-57442104 MS.gene02129:CDS
GGGTTATGATAAAACTGTGA+TGG 0.616862 2.2:+57441935 None:intergenic
CTCGGATCAAAAGAATTCGG+AGG 0.632089 2.2:+57441853 None:intergenic
CGGGTCCCACCCCAAAACAA+TGG 0.635478 2.2:-57442316 MS.gene02129:CDS
TCGGATCAAAAGAATTCGGA+GGG 0.638676 2.2:+57441854 None:intergenic
TGGTACCATGCAATTCATTG+AGG 0.638950 2.2:-57442296 MS.gene02129:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.640763 2.2:+57442291 None:intergenic
GCTAATAGGCTTGTAATCCA+GGG 0.641442 2.2:-57442055 MS.gene02129:CDS
GGATTTGGTTGATGATGGAG+AGG 0.642684 2.2:+57441977 None:intergenic
TTTGGCTTCAACAATATGGG+CGG 0.655383 2.2:-57441893 MS.gene02129:CDS
TGACCGTATCAACATTGGGG+TGG 0.665619 2.2:+57442356 None:intergenic
CAATGACCGTATCAACATTG+GGG 0.682272 2.2:+57442353 None:intergenic
GGAAACATCTGAGCTTGTGG+AGG 0.688544 2.2:+57441956 None:intergenic
TCAAGTGGAAGGAAAAGCCG+AGG 0.705721 2.2:-57442547 MS.gene02129:CDS
GAGCAACATCTGCACCACAG+AGG 0.729838 2.2:+57442419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCATTTCAATCTTT+TGG + chr2.2:57441891-57441910 None:intergenic 15.0%
!! CTTCTTGAATAATTCAAGTT+GGG + chr2.2:57442298-57442317 None:intergenic 25.0%
CCAACTTGAATTATTCAAGA+AGG - chr2.2:57442296-57442315 MS.gene02129:CDS 30.0%
CCTTCTTGAATAATTCAAGT+TGG + chr2.2:57442299-57442318 None:intergenic 30.0%
! TTGTTTGGCTTCAACAATAT+GGG - chr2.2:57442513-57442532 MS.gene02129:CDS 30.0%
! TTTGTTTGGCTTCAACAATA+TGG - chr2.2:57442512-57442531 MS.gene02129:CDS 30.0%
AACAAATGAGGTTGCAACAT+TGG + chr2.2:57442498-57442517 None:intergenic 35.0%
AATGAAAATACCTTCTCTCC+AGG + chr2.2:57442030-57442049 None:intergenic 35.0%
ACAAATGAGGTTGCAACATT+GGG + chr2.2:57442497-57442516 None:intergenic 35.0%
ATCAATGACCGTATCAACAT+TGG + chr2.2:57442061-57442080 None:intergenic 35.0%
ATGTTGCAACCTCATTTGTT+TGG - chr2.2:57442498-57442517 MS.gene02129:CDS 35.0%
GAACCGTTTCCAACAAAAAA+CGG + chr2.2:57442399-57442418 None:intergenic 35.0%
GGGTTATGATAAAACTGTGA+TGG + chr2.2:57442477-57442496 None:intergenic 35.0%
GTTTCCAACAAAAAACGGAA+GGG + chr2.2:57442394-57442413 None:intergenic 35.0%
TCAATGACCGTATCAACATT+GGG + chr2.2:57442060-57442079 None:intergenic 35.0%
TCATTGATCGTTATCTCTCT+CGG - chr2.2:57442073-57442092 MS.gene02129:CDS 35.0%
TGAATTATTCAAGAAGGCTC+TGG - chr2.2:57442302-57442321 MS.gene02129:CDS 35.0%
TTGTTGAAGCCAAACAAATG+AGG + chr2.2:57442510-57442529 None:intergenic 35.0%
TTGTTGCTCATCATGCTAAT+AGG - chr2.2:57442340-57442359 MS.gene02129:CDS 35.0%
! ATTGCATGGTACCATTGTTT+TGG + chr2.2:57442107-57442126 None:intergenic 35.0%
! TTGCATGGTACCATTGTTTT+GGG + chr2.2:57442106-57442125 None:intergenic 35.0%
!!! CTTCCGTTTTTTGTTGGAAA+CGG - chr2.2:57442393-57442412 MS.gene02129:CDS 35.0%
!!! GGAGAGAAGGTATTTTCATT+TGG - chr2.2:57442030-57442049 MS.gene02129:CDS 35.0%
AAAAACGGAAGGGTTTGAGT+AGG + chr2.2:57442384-57442403 None:intergenic 40.0%
CAATGACCGTATCAACATTG+GGG + chr2.2:57442059-57442078 None:intergenic 40.0%
CATTGATCGTTATCTCTCTC+GGG - chr2.2:57442074-57442093 MS.gene02129:CDS 40.0%
CGTTTCCAACAAAAAACGGA+AGG + chr2.2:57442395-57442414 None:intergenic 40.0%
GCTAATAGGCTTGTAATCCA+GGG - chr2.2:57442354-57442373 MS.gene02129:CDS 40.0%
TGCTAATAGGCTTGTAATCC+AGG - chr2.2:57442353-57442372 MS.gene02129:CDS 40.0%
TGGTACCATGCAATTCATTG+AGG - chr2.2:57442113-57442132 MS.gene02129:CDS 40.0%
! ATTATTCAAGAAGGCTCTGG+AGG - chr2.2:57442305-57442324 MS.gene02129:CDS 40.0%
! TTTCAATCTTTTGGCGACCT+CGG + chr2.2:57441882-57441901 None:intergenic 40.0%
! TTTGGCTTCAACAATATGGG+CGG - chr2.2:57442516-57442535 MS.gene02129:CDS 40.0%
!! GACTGAGACTCAATTTTGGT+GGG - chr2.2:57442245-57442264 MS.gene02129:CDS 40.0%
!! TGCATGGTACCATTGTTTTG+GGG + chr2.2:57442105-57442124 None:intergenic 40.0%
!!! CAAACCCTTCCGTTTTTTGT+TGG - chr2.2:57442387-57442406 MS.gene02129:CDS 40.0%
ATCTGAGCTTGTGGAGGATT+TGG + chr2.2:57442450-57442469 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + chr2.2:57441954-57441973 None:intergenic 45.0%
GACTCAGATCAACCAACTAC+TGG - chr2.2:57442176-57442195 MS.gene02129:CDS 45.0%
GATGGAAACATCTGAGCTTG+TGG + chr2.2:57442459-57442478 None:intergenic 45.0%
GTGAGCCTCAATGAATTGCA+TGG + chr2.2:57442121-57442140 None:intergenic 45.0%
TCTTCTCGATGTCCAGTAGT+TGG + chr2.2:57442191-57442210 None:intergenic 45.0%
! AGGCGACTGAGACTCAATTT+TGG - chr2.2:57442241-57442260 MS.gene02129:CDS 45.0%
! ATGATGGAGAGGCATGTTAG+AGG + chr2.2:57442424-57442443 None:intergenic 45.0%
! CGACTGAGACTCAATTTTGG+TGG - chr2.2:57442244-57442263 MS.gene02129:CDS 45.0%
! TCCCGTTGATGGGATGAATA+GGG - chr2.2:57442272-57442291 MS.gene02129:CDS 45.0%
! TGTTTTCTCACCTGGAGAGA+AGG - chr2.2:57442017-57442036 MS.gene02129:CDS 45.0%
!! GGATTTGGTTGATGATGGAG+AGG + chr2.2:57442435-57442454 None:intergenic 45.0%
!! GTGGAGGATTTGGTTGATGA+TGG + chr2.2:57442440-57442459 None:intergenic 45.0%
!!! ATGGTACCATTGTTTTGGGG+TGG + chr2.2:57442102-57442121 None:intergenic 45.0%
!!! TGGTACCATTGTTTTGGGGT+GGG + chr2.2:57442101-57442120 None:intergenic 45.0%
AGCAACATCTGCACCACAGA+GGG + chr2.2:57441992-57442011 None:intergenic 50.0%
GCCCTATTCATCCCATCAAC+GGG + chr2.2:57442276-57442295 None:intergenic 50.0%
GGAAACATCTGAGCTTGTGG+AGG + chr2.2:57442456-57442475 None:intergenic 50.0%
GGCCCTATTCATCCCATCAA+CGG + chr2.2:57442277-57442296 None:intergenic 50.0%
TCAAGTGGAAGGAAAAGCCG+AGG - chr2.2:57441862-57441881 MS.gene02129:CDS 50.0%
TGACCGTATCAACATTGGGG+TGG + chr2.2:57442056-57442075 None:intergenic 50.0%
TGGCCACCCCAATGTTGATA+CGG - chr2.2:57442050-57442069 MS.gene02129:CDS 50.0%
TTCAACAATATGGGCGGAGG+AGG - chr2.2:57442522-57442541 MS.gene02129:CDS 50.0%
! GTCCCGTTGATGGGATGAAT+AGG - chr2.2:57442271-57442290 MS.gene02129:CDS 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - chr2.2:57442009-57442028 MS.gene02129:CDS 50.0%
AACAATATGGGCGGAGGAGG+TGG - chr2.2:57442525-57442544 MS.gene02129:CDS 55.0%
AGATCTGAGCCACTTGCGCA+AGG - chr2.2:57442221-57442240 MS.gene02129:CDS 55.0%
AGTGAGCTTTGCACCCTCTG+TGG - chr2.2:57441976-57441995 MS.gene02129:CDS 55.0%
GAGCAACATCTGCACCACAG+AGG + chr2.2:57441993-57442012 None:intergenic 55.0%
GGCTTCAACAATATGGGCGG+AGG - chr2.2:57442519-57442538 MS.gene02129:CDS 55.0%
! ACAGAGGGTGCAAAGCTCAC+TGG + chr2.2:57441977-57441996 None:intergenic 55.0%
! AGTATTGAGCTCGCGCACGT+TGG + chr2.2:57442151-57442170 None:intergenic 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - chr2.2:57441937-57441956 MS.gene02129:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - chr2.2:57441938-57441957 MS.gene02129:CDS 55.0%
ATGGGCGGAGGAGGTGGATA+TGG - chr2.2:57442531-57442550 MS.gene02129:CDS 60.0%
CGGGTCCCACCCCAAAACAA+TGG - chr2.2:57442093-57442112 MS.gene02129:CDS 60.0%
TCTCAGTCGCCTTGCGCAAG+TGG + chr2.2:57442233-57442252 None:intergenic 60.0%
! GGTGGGCTTGTCCCGTTGAT+GGG - chr2.2:57442262-57442281 MS.gene02129:CDS 60.0%
!! GGGTTTGAGTAGGAGCACCC+TGG + chr2.2:57442374-57442393 None:intergenic 60.0%
!! TGGTGGGCTTGTCCCGTTGA+TGG - chr2.2:57442261-57442280 MS.gene02129:CDS 60.0%
GCTCGCGCACGTTGGCGCTA+CGG + chr2.2:57442143-57442162 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 57441859 57442572 57441859 ID=MS.gene02129
chr2.2 mRNA 57441859 57442572 57441859 ID=MS.gene02129.t1;Parent=MS.gene02129
chr2.2 exon 57441859 57442572 57441859 ID=MS.gene02129.t1.exon1;Parent=MS.gene02129.t1
chr2.2 CDS 57441859 57442572 57441859 ID=cds.MS.gene02129.t1;Parent=MS.gene02129.t1
Gene Sequence

>MS.gene02129

ATGTCAAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAAATGAAAAAAATGAGCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACCCTCTGTGGTGCAGATGTTGCTCTCGTTGTTTTCTCACCTGGAGAGAAGGTATTTTCATTTGGCCACCCCAATGTTGATACGGTCATTGATCGTTATCTCTCTCGGGTCCCACCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCACCGTAGCGCCAACGTGCGCGAGCTCAATACTCAGCTGACTCAGATCAACCAACTACTGGACATCGAGAAGAAACGTGCTGAAGATCTGAGCCACTTGCGCAAGGCGACTGAGACTCAATTTTGGTGGGCTTGTCCCGTTGATGGGATGAATAGGGCCCAACTTGAATTATTCAAGAAGGCTCTGGAGGAGCTTAAGAAACTTGTTGCTCATCATGCTAATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCCTTCCGTTTTTTGTTGGAAACGGTTCATCCTCTAACATGCCTCTCCATCATCAACCAAATCCTCCACAAGCTCAGATGTTTCCATCACAGTTTTATCATAACCCAATGTTGCAACCTCATTTGTTTGGCTTCAACAATATGGGCGGAGGAGGTGGATATGGACCCTCCGAATTCTTTTGA
Protein sequence

>MS.gene02129.t1

MSSGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSFGHPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSANVRELNTQLTQINQLLDIEKKRAEDLSHLRKATETQFWWACPVDGMNRAQLELFKKALEELKKLVAHHANRLVIQGAPTQTLPFFVGNGSSSNMPLHHQPNPPQAQMFPSQFYHNPMLQPHLFGFNNMGGGGGYGPSEFF