AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021364

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021364.t1 MTR_2g097020 80.060 672 114 5 9 665 1 667 0.0 1049
MS.gene021364.t1 MTR_2g095400 76.833 682 88 8 9 665 1 637 0.0 972
MS.gene021364.t1 MTR_4g046643 74.251 668 129 5 9 648 1 653 0.0 936
MS.gene021364.t1 MTR_2g097010 74.194 682 147 5 9 665 1 678 0.0 930
MS.gene021364.t1 MTR_2g097000 67.602 392 84 6 313 665 2 389 1.48e-166 482
MS.gene021364.t1 MTR_4g126200 75.665 263 50 3 405 665 3 253 2.24e-132 390
MS.gene021364.t1 MTR_3g067815 36.873 678 339 15 18 660 13 636 4.55e-131 400
MS.gene021364.t1 MTR_5g079940 36.323 669 351 16 29 663 492 1119 1.21e-120 386
MS.gene021364.t1 MTR_4g006760 33.582 670 340 15 29 661 24 625 6.40e-104 329
MS.gene021364.t1 MTR_4g131350 34.815 675 330 19 29 663 77 681 2.99e-103 329
MS.gene021364.t1 MTR_4g125920 34.524 672 336 18 29 663 24 628 7.11e-102 324
MS.gene021364.t1 MTR_3g067855 46.352 233 106 6 432 663 123 337 1.61e-50 180
MS.gene021364.t1 MTR_3g067845 37.879 264 143 6 402 663 6 250 2.02e-36 138
MS.gene021364.t1 MTR_8g446460 54.745 137 55 4 17 150 107 239 1.19e-34 134
MS.gene021364.t1 MTR_4g126180 69.149 94 29 0 314 407 3 96 1.10e-32 122
MS.gene021364.t1 MTR_4g131310 24.545 440 237 12 29 449 24 387 1.96e-26 113
MS.gene021364.t1 MTR_4g131310 60.938 64 25 0 590 653 391 454 4.31e-18 87.8
MS.gene021364.t1 MTR_2g066850 59.770 87 30 3 8 92 64 147 3.63e-21 99.4
MS.gene021364.t1 MTR_2g075630 67.164 67 19 2 8 74 65 128 1.40e-20 92.4
MS.gene021364.t1 MTR_3g067825 45.745 94 46 2 574 663 10 102 6.11e-17 77.8
MS.gene021364.t1 MTR_8g063010 55.696 79 30 3 26 104 57 130 3.04e-16 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021364.t1 AT1G13790 39.785 744 315 19 20 656 9 726 4.63e-141 429
MS.gene021364.t1 AT1G13790 39.785 744 315 19 20 656 9 726 4.63e-141 429
MS.gene021364.t1 AT3G48670 34.191 661 344 13 40 663 38 644 1.57e-102 327
MS.gene021364.t1 AT3G48670 34.191 661 344 13 40 663 38 644 1.57e-102 327
MS.gene021364.t1 AT3G48670 34.191 661 344 13 40 663 38 644 1.57e-102 327
MS.gene021364.t1 AT3G12550 33.626 684 357 15 24 664 8 637 6.07e-102 325
MS.gene021364.t1 AT3G12550 33.577 685 357 16 24 664 8 638 3.91e-100 320
MS.gene021364.t1 AT3G12550 33.577 685 357 16 24 664 8 638 3.91e-100 320
MS.gene021364.t1 AT3G12550 33.577 685 357 16 24 664 8 638 3.91e-100 320
MS.gene021364.t1 AT1G15910 32.159 681 358 17 24 664 18 634 6.75e-93 301
MS.gene021364.t1 AT5G59390 36.842 532 277 14 156 654 34 539 4.22e-88 286
MS.gene021364.t1 AT5G59390 36.842 532 277 14 156 654 34 539 4.22e-88 286
MS.gene021364.t1 AT5G59390 36.842 532 277 14 156 654 34 539 4.22e-88 286
MS.gene021364.t1 AT1G80790 32.644 677 360 13 23 664 19 634 6.75e-87 285
MS.gene021364.t1 AT1G80790 32.644 677 360 13 23 664 19 634 6.75e-87 285
MS.gene021364.t1 AT5G59390 36.499 537 277 15 156 654 34 544 7.66e-86 280
MS.gene021364.t1 AT5G59390 36.499 537 277 15 156 654 34 544 7.66e-86 280
MS.gene021364.t1 AT4G00380 30.792 682 368 15 23 664 18 635 2.28e-85 281
MS.gene021364.t1 AT4G00380 30.792 682 368 15 23 664 18 635 2.28e-85 281
MS.gene021364.t1 AT4G00380 34.070 543 300 10 155 664 90 607 1.38e-84 278
MS.gene021364.t1 AT4G01180 34.574 564 287 15 138 654 11 539 2.48e-82 271
MS.gene021364.t1 AT3G12550 31.167 600 316 15 24 580 8 553 1.01e-69 238
MS.gene021364.t1 AT4G01780 35.666 443 199 10 223 663 111 469 2.06e-64 221
MS.gene021364.t1 AT3G29375 41.981 212 99 4 453 663 38 226 8.32e-43 154
MS.gene021364.t1 AT1G80790 27.790 457 250 10 23 444 19 430 1.96e-42 160
MS.gene021364.t1 AT3G29375 41.981 212 99 4 453 663 161 349 7.24e-41 153
MS.gene021364.t1 AT3G29375 36.719 128 60 2 453 580 38 144 1.52e-15 75.5
MS.gene021364.t1 AT2G16490 42.105 76 44 0 589 664 74 149 5.18e-14 71.2

Find 141 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTGCAATTGTTGAATT+TGG 0.070469 6.3:-55422725 MS.gene021364:CDS
ATTTCCATTGCTTAATTAAA+TGG 0.098910 6.3:+55419973 None:intergenic
GGGGATTTGAAAACGGTTTC+TGG 0.111458 6.3:-55422518 MS.gene021364:CDS
TTCATTGGTCTTCAGCTTTA+AGG 0.118185 6.3:+55422439 None:intergenic
CACGAGTATATTCTAAATTT+TGG 0.119844 6.3:+55423326 None:intergenic
ACTTGATATTAAGCCATTTC+TGG 0.218339 6.3:-55420624 MS.gene021364:CDS
TTCGTTGGTTAATGTGAATT+TGG 0.249953 6.3:-55422933 MS.gene021364:CDS
GGCAAACACCTCCAGGAAAA+AGG 0.252537 6.3:-55422539 MS.gene021364:CDS
ACTTTGAACGGATGCCAATT+TGG 0.259823 6.3:+55420470 None:intergenic
TAAGCAATGGAAATCAAATA+AGG 0.267301 6.3:-55419964 MS.gene021364:CDS
GAGCGAGGAGATAGACTATT+TGG 0.286214 6.3:-55422605 MS.gene021364:CDS
TAGCTTGAGTGTTGTTCTTT+GGG 0.290615 6.3:+55420672 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.290672 6.3:-55422345 MS.gene021364:CDS
ATAGCTTGAGTGTTGTTCTT+TGG 0.293353 6.3:+55420671 None:intergenic
TAGTCCTTGTTGTAGCAAAA+TGG 0.309878 6.3:+55423205 None:intergenic
CTCTTAGCTGCTTCCAGAAA+TGG 0.310177 6.3:+55420611 None:intergenic
TGTTGTCTGTTCCAATTCAT+TGG 0.315128 6.3:+55422424 None:intergenic
TTTGCTCCATCACTTTCCTT+AGG 0.315993 6.3:+55422375 None:intergenic
ACAGCTGAAAGGAGCTTTCC+AGG 0.321504 6.3:-55421389 MS.gene021364:CDS
AATTCCAGAGTTCCGGTATT+GGG 0.334900 6.3:+55420036 None:intergenic
AGCGGGATTACTTGGGTTTA+CGG 0.339146 6.3:-55422634 MS.gene021364:CDS
GGAAAAGGAAGAGGAATTAG+AGG 0.352913 6.3:-55421296 MS.gene021364:CDS
TCAACAAACACTGGTTGTTC+AGG 0.353904 6.3:-55421260 MS.gene021364:CDS
TCTTTAAAATTCCAGAGTTC+CGG 0.355321 6.3:+55420029 None:intergenic
GCAGGCCGAACGCAAGTATC+AGG 0.355727 6.3:-55422109 MS.gene021364:CDS
CTGTGGTAAGCGGGATTACT+TGG 0.359149 6.3:-55422642 MS.gene021364:CDS
ATATACTCGTGAATCTGATT+TGG 0.366588 6.3:-55423314 MS.gene021364:CDS
TTGCTCCATCACTTTCCTTA+GGG 0.374227 6.3:+55422376 None:intergenic
GAAGGATCCAACGAAAATTA+AGG 0.375245 6.3:-55422816 MS.gene021364:CDS
TCGTTGGTTAATGTGAATTT+GGG 0.376063 6.3:-55422932 MS.gene021364:CDS
GTTTCATTCTTTATTCTGCT+TGG 0.384896 6.3:-55423925 MS.gene021364:intron
CTCTAATGTGATTCATTACC+TGG 0.385645 6.3:+55421371 None:intergenic
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 6.3:-55420127 MS.gene021364:CDS
AAACAAGCTTGTCTCTGGTT+TGG 0.392657 6.3:-55422468 MS.gene021364:CDS
AAAGCTGAAGACCAATGAAT+TGG 0.393547 6.3:-55422435 MS.gene021364:CDS
ATGCTTGAACATTTCAATAA+GGG 0.393919 6.3:-55422344 MS.gene021364:intron
GAAAAGAAGCCGAGGACAAT+AGG 0.397047 6.3:-55422496 MS.gene021364:CDS
TTTCCATTGCTTAATTAAAT+GGG 0.397793 6.3:+55419974 None:intergenic
TGCAAAACAAGCATTGGAAT+TGG 0.398690 6.3:-55421419 MS.gene021364:CDS
GTATCAGGAGAAAGTATCTA+AGG 0.410358 6.3:-55422094 MS.gene021364:CDS
AAGCTATAATTTCTGTGAAA+AGG 0.426145 6.3:-55420655 MS.gene021364:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 6.3:-55420128 MS.gene021364:CDS
CAGAATGGAGCTGCAGGAAA+AGG 0.433632 6.3:-55421311 MS.gene021364:CDS
AAATTCCAGAGTTCCGGTAT+TGG 0.433634 6.3:+55420035 None:intergenic
ACTGTGTTAAAGATCCAAAT+TGG 0.435336 6.3:-55420484 MS.gene021364:CDS
AAAGCAAACAAGCTTGTCTC+TGG 0.443077 6.3:-55422473 MS.gene021364:CDS
AGGAGGAGCTGATTATGAAA+GGG 0.447751 6.3:-55422796 MS.gene021364:CDS
ACTGCACTGTGGAACCTTCA+TGG 0.449566 6.3:-55422755 MS.gene021364:CDS
TGAAAAGCTGAAAAGTTTGA+AGG 0.453713 6.3:-55420138 MS.gene021364:CDS
TTGCATCCAGTCCTCTCTCC+AGG 0.453963 6.3:+55421437 None:intergenic
GTTTGCTTTCCTATTGTCCT+CGG 0.455452 6.3:+55422487 None:intergenic
GACTTATCATTACGAACAAC+AGG 0.456419 6.3:+55423040 None:intergenic
CTTCTTCTCAAAATATAGCT+TGG 0.458126 6.3:+55421969 None:intergenic
AGTCCTTGTTGTAGCAAAAT+GGG 0.460972 6.3:+55423206 None:intergenic
AAGCAATGGAAATCAAATAA+GGG 0.461528 6.3:-55419963 MS.gene021364:CDS
TTACTTGGGTTTACGGAAGC+AGG 0.462289 6.3:-55422627 MS.gene021364:CDS
ATTGTTTGTTCATAGTGGAT+TGG 0.465199 6.3:-55420698 MS.gene021364:intron
TTTCTCCTGATACTTGCGTT+CGG 0.469898 6.3:+55422104 None:intergenic
CCAGTCTGGAGCTGGAAGTT+CGG 0.471555 6.3:-55422059 MS.gene021364:CDS
AGCAATCAGAATGGAGCTGC+AGG 0.472823 6.3:-55421317 MS.gene021364:CDS
TGAAAATGCCAGTCTGGAGC+TGG 0.474792 6.3:-55422067 MS.gene021364:CDS
GGATCATGAAAATGCCAGTC+TGG 0.478798 6.3:-55422073 MS.gene021364:CDS
TATAATTTCTGTGAAAAGGA+TGG 0.482190 6.3:-55420651 MS.gene021364:CDS
TTTGCAATTGTTGAATTTGG+AGG 0.485072 6.3:-55422722 MS.gene021364:CDS
TATGATATCAAGGATATAGT+TGG 0.497256 6.3:-55422560 MS.gene021364:CDS
TCCAAATTCAACAATTGCAA+AGG 0.497847 6.3:+55422724 None:intergenic
AGGAAGGAAGGCTTCGTTGA+AGG 0.499099 6.3:-55420006 MS.gene021364:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 6.3:-55420120 MS.gene021364:CDS
AAGGAGGAGCTGATTATGAA+AGG 0.500167 6.3:-55422797 MS.gene021364:CDS
AGCAGAGCACTGTGGTAAGC+GGG 0.500435 6.3:-55422651 MS.gene021364:CDS
GAATGTTGCTAAGGGTTCGT+TGG 0.504072 6.3:-55422948 MS.gene021364:CDS
CACAGTGCAGTAACTTTCAT+CGG 0.504310 6.3:+55422767 None:intergenic
CCGAACTTCCAGCTCCAGAC+TGG 0.505605 6.3:+55422059 None:intergenic
ACTTGTTAAGAATGTTGCTA+AGG 0.507417 6.3:-55422957 MS.gene021364:CDS
GAGACACACGTCCACAATTG+TGG 0.510194 6.3:-55423161 MS.gene021364:CDS
TTATCAGTTACAACTTTGAA+CGG 0.511127 6.3:+55420458 None:intergenic
CAAACTTATAGCCCGTGAAA+AGG 0.511318 6.3:-55422031 MS.gene021364:CDS
TATAGTTGGCAAACACCTCC+AGG 0.512464 6.3:-55422546 MS.gene021364:CDS
AGCTACGGTGATGTTAAAGT+TGG 0.513136 6.3:-55423076 MS.gene021364:CDS
GGTATTGGGTACCGACCACT+AGG 0.514631 6.3:+55420050 None:intergenic
AGATAGACTATTTGGTTGGA+TGG 0.515691 6.3:-55422597 MS.gene021364:CDS
ATGAGTTGTTTGTATATCCA+TGG 0.518192 6.3:-55422898 MS.gene021364:CDS
CCAAATTCAACAATTGCAAA+GGG 0.521084 6.3:+55422725 None:intergenic
TTTCCCATTTAATTAAGCAA+TGG 0.524848 6.3:-55419977 MS.gene021364:CDS
ACTGGATGCAAAACAAGCAT+TGG 0.525557 6.3:-55421425 MS.gene021364:CDS
ACAATGCTATGAAGTTAGAA+AGG 0.526734 6.3:-55422682 MS.gene021364:CDS
CTTGTTAAGAATGTTGCTAA+GGG 0.530987 6.3:-55422956 MS.gene021364:CDS
GGTACCCAATACCGGAACTC+TGG 0.532850 6.3:-55420040 MS.gene021364:CDS
GAGGAGATAGACTATTTGGT+TGG 0.535517 6.3:-55422601 MS.gene021364:CDS
TCGTGATGACTATGATATCA+AGG 0.536854 6.3:-55422570 MS.gene021364:CDS
AAAGTTGTAACTGATAAAGA+AGG 0.540435 6.3:-55420452 MS.gene021364:CDS
TGTGGTAAGCGGGATTACTT+GGG 0.540703 6.3:-55422641 MS.gene021364:CDS
AGAAATCAGCAAGATGCGGC+AGG 0.543540 6.3:-55422127 MS.gene021364:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.545043 6.3:-55420650 MS.gene021364:CDS
TCATGACCTGGAGAGAGGAC+TGG 0.550277 6.3:-55421443 MS.gene021364:CDS
AATCGAGTGGTGCTCGAAGT+GGG 0.554131 6.3:-55420510 MS.gene021364:CDS
CAAAGGGTAATTGTCCATGA+AGG 0.557538 6.3:+55422741 None:intergenic
TAGTGGTCGGTACCCAATAC+CGG 0.557758 6.3:-55420048 MS.gene021364:CDS
AAAATTGGAAGCAATCAGAA+TGG 0.559788 6.3:-55421326 MS.gene021364:CDS
TTTCTAACTTCATAGCATTG+TGG 0.565243 6.3:+55422684 None:intergenic
AAGGAAGGCTTCGTTGAAGG+AGG 0.570974 6.3:-55420003 MS.gene021364:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.576364 6.3:-55421305 MS.gene021364:CDS
ATGCAAGTCACCCACAATTG+TGG 0.577684 6.3:+55423150 None:intergenic
GAATTTGGAGGACAGTGGGA+TGG 0.580172 6.3:-55422710 MS.gene021364:CDS
AAGTAGAAAGTATGTTGCGA+AGG 0.580726 6.3:-55422834 MS.gene021364:CDS
ATGAGGCGAAAGTGTCCCTA+AGG 0.584555 6.3:-55422391 MS.gene021364:CDS
GAAAAGGAAGAGGAATTAGA+GGG 0.585875 6.3:-55421295 MS.gene021364:CDS
AAAATTCATGACCTGGAGAG+AGG 0.591924 6.3:-55421448 MS.gene021364:CDS
TCACTAGCAGTACTAACAGC+AGG 0.592415 6.3:+55423016 None:intergenic
CTTGAAAGATGATTACTACA+AGG 0.592695 6.3:-55423263 MS.gene021364:CDS
TGTTGAATTTGGAGGACAGT+GGG 0.592870 6.3:-55422714 MS.gene021364:CDS
AGACACACGTCCACAATTGT+GGG 0.595631 6.3:-55423160 MS.gene021364:CDS
AGTGTCCCTAAGGAAAGTGA+TGG 0.598158 6.3:-55422381 MS.gene021364:CDS
CAATCGAGTGGTGCTCGAAG+TGG 0.602767 6.3:-55420511 MS.gene021364:CDS
GACTAAGAGAAAACTTTCAG+AGG 0.605987 6.3:-55420549 MS.gene021364:CDS
TGCAGTAGCTACAACTCTGA+AGG 0.607260 6.3:-55420090 MS.gene021364:CDS
TCACAAGAAAATTCATGACC+TGG 0.607531 6.3:-55421455 MS.gene021364:CDS
TTGGAGATTGAACAGCTGAA+AGG 0.614196 6.3:-55421400 MS.gene021364:CDS
GGAAGATCTTCAACAAACAC+TGG 0.622373 6.3:-55421269 MS.gene021364:CDS
TAGCAGAGCACTGTGGTAAG+CGG 0.623837 6.3:-55422652 MS.gene021364:CDS
GACAACAAGCAAACATCATG+AGG 0.628408 6.3:-55422408 MS.gene021364:CDS
AGAAAATAAAAGCAATCGAG+TGG 0.630270 6.3:-55420523 MS.gene021364:CDS
GTCTGGAGCTGGAAGTTCGG+AGG 0.636966 6.3:-55422056 MS.gene021364:CDS
AGGAAGGCTTCGTTGAAGGA+GGG 0.636979 6.3:-55420002 MS.gene021364:CDS
GTTGTTTGTATATCCATGGA+TGG 0.639733 6.3:-55422894 MS.gene021364:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 6.3:-55420126 MS.gene021364:CDS
AAAGGAAGAGGAATTAGAGG+GGG 0.645418 6.3:-55421293 MS.gene021364:CDS
GGTTTACGGAAGCAGGAGCG+AGG 0.648599 6.3:-55422620 MS.gene021364:CDS
GAAATGTATATTGAAAGCTA+CGG 0.650258 6.3:-55423091 MS.gene021364:CDS
TGATAAAGAAGGAAACTCCA+AGG 0.654804 6.3:-55420441 MS.gene021364:intron
AAAAGGAAGAGGAATTAGAG+GGG 0.657317 6.3:-55421294 MS.gene021364:CDS
TTGTTGAATTTGGAGGACAG+TGG 0.666479 6.3:-55422715 MS.gene021364:CDS
ATGAGTACAACCCTAGTGGT+CGG 0.671880 6.3:-55420061 MS.gene021364:CDS
GGTTTCTGGAAAAGAAGCCG+AGG 0.676719 6.3:-55422504 MS.gene021364:CDS
CATTAGAAATCAGCAAGATG+CGG 0.680318 6.3:-55422131 MS.gene021364:intron
GGATCCAACGAAAATTAAGG+AGG 0.684524 6.3:-55422813 MS.gene021364:CDS
TGTGGGTGACTTGCATGAGA+CGG 0.697226 6.3:-55423143 MS.gene021364:CDS
CGATGAAAGTTACTGCACTG+TGG 0.699936 6.3:-55422766 MS.gene021364:CDS
TTAAATGAGTACAACCCTAG+TGG 0.705810 6.3:-55420065 MS.gene021364:CDS
GTATTGGGTACCGACCACTA+GGG 0.725721 6.3:+55420051 None:intergenic
AGCTTTCTAGCAGAGCACTG+TGG 0.773857 6.3:-55422659 MS.gene021364:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTTATTAAAAAATAAG+AGG + chr6.3:55422184-55422203 None:intergenic 10.0%
!! TAAGTTATTAAAAAATAAGA+GGG + chr6.3:55422183-55422202 None:intergenic 10.0%
!!! TATGATATTTTAATATTTCA+TGG - chr6.3:55421695-55421714 MS.gene021364:intron 10.0%
!! AATTAAAAACTGTAGATAAT+AGG + chr6.3:55422329-55422348 None:intergenic 15.0%
!! TAATTAGAAAGAATAGTAAT+TGG - chr6.3:55423574-55423593 MS.gene021364:intron 15.0%
!!! ATTTTGAAAAATATTGTTAC+TGG - chr6.3:55421005-55421024 MS.gene021364:intron 15.0%
!!! TACTAATATATCTATGATTT+TGG - chr6.3:55421630-55421649 MS.gene021364:intron 15.0%
!!! TTTACATTTTATGTGAAAAT+TGG - chr6.3:55423083-55423102 MS.gene021364:CDS 15.0%
!! AAATTGAATTGATCCAATAT+TGG - chr6.3:55421566-55421585 MS.gene021364:intron 20.0%
!! ATAAAATCAACTAGAAAGAA+AGG + chr6.3:55420114-55420133 None:intergenic 20.0%
!! ATATGTTAGATATATTTCAC+AGG - chr6.3:55423694-55423713 MS.gene021364:intron 20.0%
!! ATTTATGCTTAGATTTAACA+AGG + chr6.3:55422751-55422770 None:intergenic 20.0%
!! ATTTCCATTGCTTAATTAAA+TGG + chr6.3:55423904-55423923 None:intergenic 20.0%
!! TAAAATCAACTAGAAAGAAA+GGG + chr6.3:55420113-55420132 None:intergenic 20.0%
!! TATTAAAAAATAAGAGGGAT+TGG + chr6.3:55422178-55422197 None:intergenic 20.0%
!! TTAAATCTAAGCATAAATGT+AGG - chr6.3:55422753-55422772 MS.gene021364:CDS 20.0%
!! TTTCCATTGCTTAATTAAAT+GGG + chr6.3:55423903-55423922 None:intergenic 20.0%
!!! AAACATTCAAATCATGTTTT+TGG - chr6.3:55422843-55422862 MS.gene021364:CDS 20.0%
!!! TAAATTGGCTTCTTTAAAAA+TGG - chr6.3:55422079-55422098 MS.gene021364:CDS 20.0%
!!! TTCATAATGTTTCACATTTT+AGG - chr6.3:55420178-55420197 MS.gene021364:intron 20.0%
!!! TTCTATACTTTACTTTTTCA+TGG - chr6.3:55420443-55420462 MS.gene021364:CDS 20.0%
! AAAGTTGTAACTGATAAAGA+AGG - chr6.3:55423422-55423441 MS.gene021364:intron 25.0%
! AAGCAATGGAAATCAAATAA+GGG - chr6.3:55423911-55423930 MS.gene021364:intron 25.0%
! AAGCTATAATTTCTGTGAAA+AGG - chr6.3:55423219-55423238 MS.gene021364:CDS 25.0%
! AATAAGCTCAAAGTAAAATG+TGG + chr6.3:55420056-55420075 None:intergenic 25.0%
! AATTTACAGGAGAACTAAAT+TGG - chr6.3:55422064-55422083 MS.gene021364:CDS 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr6.3:55423224-55423243 MS.gene021364:CDS 25.0%
! ATGCTTGAACATTTCAATAA+GGG - chr6.3:55421530-55421549 MS.gene021364:intron 25.0%
! ATTCCTTAGATATAGAAACT+AGG + chr6.3:55422951-55422970 None:intergenic 25.0%
! ATTTCATTGTTTGTTCATAG+TGG - chr6.3:55423171-55423190 MS.gene021364:CDS 25.0%
! ATTTGATACAAAAAACCGAA+TGG + chr6.3:55422147-55422166 None:intergenic 25.0%
! GAAATGTATATTGAAAGCTA+CGG - chr6.3:55420783-55420802 MS.gene021364:intron 25.0%
! GATTTGAATGTTTGCAAAAT+AGG + chr6.3:55422836-55422855 None:intergenic 25.0%
! TAAGCAATGGAAATCAAATA+AGG - chr6.3:55423910-55423929 MS.gene021364:intron 25.0%
! TATAATTTCTGTGAAAAGGA+TGG - chr6.3:55423223-55423242 MS.gene021364:CDS 25.0%
! TATGATATCAAGGATATAGT+TGG - chr6.3:55421314-55421333 MS.gene021364:CDS 25.0%
! TATGTGAAAATTGGTAGAAT+CGG - chr6.3:55423092-55423111 MS.gene021364:CDS 25.0%
! TCGTGAAAAAATGATGTATT+TGG - chr6.3:55422273-55422292 MS.gene021364:intron 25.0%
! TCTAGATGAGAAGAAAAAAT+TGG - chr6.3:55422533-55422552 MS.gene021364:CDS 25.0%
! TTATCAGTTACAACTTTGAA+CGG + chr6.3:55423419-55423438 None:intergenic 25.0%
! TTTCCCATTTAATTAAGCAA+TGG - chr6.3:55423897-55423916 MS.gene021364:intron 25.0%
! TTTGAAAGTGATCAATTTAC+AGG - chr6.3:55422051-55422070 MS.gene021364:CDS 25.0%
!! ACTTTGTAAAAGATTGGTTA+CGG + chr6.3:55422699-55422718 None:intergenic 25.0%
!! ATGTATATACTTGAGTTTTG+AGG - chr6.3:55422356-55422375 MS.gene021364:CDS 25.0%
!! ATTTCACAGGAAATTTTAGA+CGG - chr6.3:55423707-55423726 MS.gene021364:intron 25.0%
!! ATTTTATGCAGTTCATAGAA+GGG + chr6.3:55423664-55423683 None:intergenic 25.0%
!! CACGAGTATATTCTAAATTT+TGG + chr6.3:55420551-55420570 None:intergenic 25.0%
!! TAACCAATCTTTTACAAAGT+CGG - chr6.3:55422699-55422718 MS.gene021364:CDS 25.0%
!! TATTTTATGCAGTTCATAGA+AGG + chr6.3:55423665-55423684 None:intergenic 25.0%
!!! AGCTTATTTTTAGTTGTTGT+TGG - chr6.3:55420068-55420087 MS.gene021364:CDS 25.0%
!!! ATACACTTATTAGCTTTTTG+CGG + chr6.3:55422671-55422690 None:intergenic 25.0%
!!! ATTCCTTCTCATTGATTTAA+AGG - chr6.3:55421590-55421609 MS.gene021364:intron 25.0%
!!! CAACATACTTTCTACTTTTT+GGG + chr6.3:55421037-55421056 None:intergenic 25.0%
!!! TTCACATTTTAGGTAAGAAT+CGG - chr6.3:55420188-55420207 MS.gene021364:intron 25.0%
AAAAGTTTGAAGGATGAGTT+CGG - chr6.3:55423746-55423765 MS.gene021364:intron 30.0%
AAAATTGGAAGCAATCAGAA+TGG - chr6.3:55422548-55422567 MS.gene021364:CDS 30.0%
AATAGTAATTGGTACTGTGT+AGG - chr6.3:55423585-55423604 MS.gene021364:intron 30.0%
AATGCTGCATTATATGCTTT+AGG + chr6.3:55423548-55423567 None:intergenic 30.0%
ACAATGCTATGAAGTTAGAA+AGG - chr6.3:55421192-55421211 MS.gene021364:intron 30.0%
ACTGTGTTAAAGATCCAAAT+TGG - chr6.3:55423390-55423409 MS.gene021364:intron 30.0%
ACTTGATATTAAGCCATTTC+TGG - chr6.3:55423250-55423269 MS.gene021364:CDS 30.0%
AGAAAATAAAAGCAATCGAG+TGG - chr6.3:55423351-55423370 MS.gene021364:intron 30.0%
ATAGTAATTGGTACTGTGTA+GGG - chr6.3:55423586-55423605 MS.gene021364:intron 30.0%
ATATACTCGTGAATCTGATT+TGG - chr6.3:55420560-55420579 MS.gene021364:CDS 30.0%
ATGAGAAGGAATACCAATAT+TGG + chr6.3:55421582-55421601 None:intergenic 30.0%
ATGAGTTGTTTGTATATCCA+TGG - chr6.3:55420976-55420995 MS.gene021364:intron 30.0%
ATGCTGCATTATATGCTTTA+GGG + chr6.3:55423547-55423566 None:intergenic 30.0%
ATGTGAAAATTGGTAGAATC+GGG - chr6.3:55423093-55423112 MS.gene021364:CDS 30.0%
CATCCTAGTTTCTATATCTA+AGG - chr6.3:55422945-55422964 MS.gene021364:CDS 30.0%
CCAAATTCAACAATTGCAAA+GGG + chr6.3:55421152-55421171 None:intergenic 30.0%
CTATTGTTTAGCAACTTCTT+TGG - chr6.3:55420493-55420512 MS.gene021364:CDS 30.0%
CTTCTTCTCAAAATATAGCT+TGG + chr6.3:55421908-55421927 None:intergenic 30.0%
CTTGAAAGATGATTACTACA+AGG - chr6.3:55420611-55420630 MS.gene021364:CDS 30.0%
CTTGTTAAGAATGTTGCTAA+GGG - chr6.3:55420918-55420937 MS.gene021364:intron 30.0%
GATGCTTGAACATTTCAATA+AGG - chr6.3:55421529-55421548 MS.gene021364:intron 30.0%
GTGTCTGAACAAAAATCATA+AGG - chr6.3:55420367-55420386 MS.gene021364:intron 30.0%
GTTTCATTCTTTATTCTGCT+TGG - chr6.3:55419949-55419968 MS.gene021364:CDS 30.0%
TCACCTTTAAATCAATGAGA+AGG + chr6.3:55421596-55421615 None:intergenic 30.0%
TCCAAATTCAACAATTGCAA+AGG + chr6.3:55421153-55421172 None:intergenic 30.0%
TGAAAAGCTGAAAAGTTTGA+AGG - chr6.3:55423736-55423755 MS.gene021364:intron 30.0%
TTTCTAACTTCATAGCATTG+TGG + chr6.3:55421193-55421212 None:intergenic 30.0%
TTTCTCATATCGTTTCATAC+TGG - chr6.3:55420256-55420275 MS.gene021364:intron 30.0%
TTTGCAATTGTTGAATTTGG+AGG - chr6.3:55421152-55421171 MS.gene021364:intron 30.0%
! AACCAATCTTTTACAAAGTC+GGG - chr6.3:55422700-55422719 MS.gene021364:CDS 30.0%
! AAGAAGCAGGTAATGTATTT+TGG - chr6.3:55421922-55421941 MS.gene021364:intron 30.0%
! ACTTGTTAAGAATGTTGCTA+AGG - chr6.3:55420917-55420936 MS.gene021364:intron 30.0%
! TCGTTGGTTAATGTGAATTT+GGG - chr6.3:55420942-55420961 MS.gene021364:intron 30.0%
! TTCGTTGGTTAATGTGAATT+TGG - chr6.3:55420941-55420960 MS.gene021364:intron 30.0%
!! ATTGTTTGTTCATAGTGGAT+TGG - chr6.3:55423176-55423195 MS.gene021364:CDS 30.0%
!! GAATTTTAAAGAAGGAAGGA+AGG - chr6.3:55423856-55423875 MS.gene021364:intron 30.0%
!! GCAACATACTTTCTACTTTT+TGG + chr6.3:55421038-55421057 None:intergenic 30.0%
!! GGAATCTTATTTAAGTTGCT+TGG - chr6.3:55422864-55422883 MS.gene021364:CDS 30.0%
!! TCTGGAATTTTAAAGAAGGA+AGG - chr6.3:55423852-55423871 MS.gene021364:intron 30.0%
!! TCTTTAAAATTCCAGAGTTC+CGG + chr6.3:55423848-55423867 None:intergenic 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG - chr6.3:55422228-55422247 MS.gene021364:intron 30.0%
!! TTTTTCAAAATGACCATCCA+TGG + chr6.3:55420996-55421015 None:intergenic 30.0%
!!! GAACTCTGGAATTTTAAAGA+AGG - chr6.3:55423848-55423867 MS.gene021364:intron 30.0%
!!! TACACTTATTAGCTTTTTGC+GGG + chr6.3:55422670-55422689 None:intergenic 30.0%
AAAAGGAAGAGGAATTAGAG+GGG - chr6.3:55422580-55422599 MS.gene021364:CDS 35.0%
AAAGCTGAAGACCAATGAAT+TGG - chr6.3:55421439-55421458 MS.gene021364:CDS 35.0%
AAAGTTTGAAGGATGAGTTC+GGG - chr6.3:55423747-55423766 MS.gene021364:intron 35.0%
AGATAGACTATTTGGTTGGA+TGG - chr6.3:55421277-55421296 MS.gene021364:CDS 35.0%
ATCCCGACTTTGTAAAAGAT+TGG + chr6.3:55422705-55422724 None:intergenic 35.0%
CAGTTCTATTACGACAATGT+TGG - chr6.3:55423510-55423529 MS.gene021364:intron 35.0%
CATTAGAAATCAGCAAGATG+CGG - chr6.3:55421743-55421762 MS.gene021364:intron 35.0%
CCCTTTGCAATTGTTGAATT+TGG - chr6.3:55421149-55421168 MS.gene021364:intron 35.0%
CTAACAACACTCTTTGTGAT+TGG + chr6.3:55422106-55422125 None:intergenic 35.0%
CTCTAATGTGATTCATTACC+TGG + chr6.3:55422506-55422525 None:intergenic 35.0%
GAAAAGGAAGAGGAATTAGA+GGG - chr6.3:55422579-55422598 MS.gene021364:CDS 35.0%
GAAGGATCCAACGAAAATTA+AGG - chr6.3:55421058-55421077 MS.gene021364:intron 35.0%
GACTAAGAGAAAACTTTCAG+AGG - chr6.3:55423325-55423344 MS.gene021364:CDS 35.0%
GACTTATCATTACGAACAAC+AGG + chr6.3:55420837-55420856 None:intergenic 35.0%
GGAAAAAGGGGATTTGAAAA+CGG - chr6.3:55421349-55421368 MS.gene021364:CDS 35.0%
GTATTTGGCAGAAGAACATA+AGG - chr6.3:55422288-55422307 MS.gene021364:intron 35.0%
GTTGTTTGTATATCCATGGA+TGG - chr6.3:55420980-55420999 MS.gene021364:intron 35.0%
TCACAAGAAAATTCATGACC+TGG - chr6.3:55422419-55422438 MS.gene021364:CDS 35.0%
TCGTGATGACTATGATATCA+AGG - chr6.3:55421304-55421323 MS.gene021364:CDS 35.0%
TGATAAAGAAGGAAACTCCA+AGG - chr6.3:55423433-55423452 MS.gene021364:intron 35.0%
TGCTGCATTATATGCTTTAG+GGG + chr6.3:55423546-55423565 None:intergenic 35.0%
TGCTGTTGTTAGCACTTATT+TGG - chr6.3:55423626-55423645 MS.gene021364:intron 35.0%
TGTTAGCATTCCTTACTCTA+TGG - chr6.3:55422120-55422139 MS.gene021364:CDS 35.0%
TGTTGTCTGTTCCAATTCAT+TGG + chr6.3:55421453-55421472 None:intergenic 35.0%
TTAAATGAGTACAACCCTAG+TGG - chr6.3:55423809-55423828 MS.gene021364:intron 35.0%
! AAGTAGAAAGTATGTTGCGA+AGG - chr6.3:55421040-55421059 MS.gene021364:intron 35.0%
! AGTCCTTGTTGTAGCAAAAT+GGG + chr6.3:55420671-55420690 None:intergenic 35.0%
! ATAGCTTGAGTGTTGTTCTT+TGG + chr6.3:55423206-55423225 None:intergenic 35.0%
! ATCTTTTACAAAGTCGGGAT+AGG - chr6.3:55422705-55422724 MS.gene021364:CDS 35.0%
! TAGCTTGAGTGTTGTTCTTT+GGG + chr6.3:55423205-55423224 None:intergenic 35.0%
! TAGTCCTTGTTGTAGCAAAA+TGG + chr6.3:55420672-55420691 None:intergenic 35.0%
! TTTTCAAATCCCCTTTTTCC+TGG + chr6.3:55421349-55421368 None:intergenic 35.0%
!! GCTATATTTTGAGAAGAAGC+AGG - chr6.3:55421909-55421928 MS.gene021364:intron 35.0%
!! GTATCAGGAGAAAGTATCTA+AGG - chr6.3:55421780-55421799 MS.gene021364:intron 35.0%
!! TGCAAAACAAGCATTGGAAT+TGG - chr6.3:55422455-55422474 MS.gene021364:CDS 35.0%
!! TTCATTGGTCTTCAGCTTTA+AGG + chr6.3:55421438-55421457 None:intergenic 35.0%
!!! TTGAGTTTTGAGGACTCTTT+TGG - chr6.3:55422366-55422385 MS.gene021364:CDS 35.0%
AAAATTCATGACCTGGAGAG+AGG - chr6.3:55422426-55422445 MS.gene021364:CDS 40.0%
AAACAAGCTTGTCTCTGGTT+TGG - chr6.3:55421406-55421425 MS.gene021364:CDS 40.0%
AAAGCAAACAAGCTTGTCTC+TGG - chr6.3:55421401-55421420 MS.gene021364:CDS 40.0%
AAAGGAAGAGGAATTAGAGG+GGG - chr6.3:55422581-55422600 MS.gene021364:CDS 40.0%
AAATTCCAGAGTTCCGGTAT+TGG + chr6.3:55423842-55423861 None:intergenic 40.0%
AACAAGTAACCACGTGATTC+AGG + chr6.3:55423001-55423020 None:intergenic 40.0%
AACAGCCAATGCAAAACGTT+CGG - chr6.3:55422916-55422935 MS.gene021364:CDS 40.0%
AACCACGTGATTCAGGTAAA+AGG + chr6.3:55422994-55423013 None:intergenic 40.0%
AAGGAGGAGCTGATTATGAA+AGG - chr6.3:55421077-55421096 MS.gene021364:intron 40.0%
AAGTTTGAAGGATGAGTTCG+GGG - chr6.3:55423748-55423767 MS.gene021364:intron 40.0%
AATTCCAGAGTTCCGGTATT+GGG + chr6.3:55423841-55423860 None:intergenic 40.0%
ACTGGATGCAAAACAAGCAT+TGG - chr6.3:55422449-55422468 MS.gene021364:CDS 40.0%
ACTTTGAACGGATGCCAATT+TGG + chr6.3:55423407-55423426 None:intergenic 40.0%
AGCTACGGTGATGTTAAAGT+TGG - chr6.3:55420798-55420817 MS.gene021364:intron 40.0%
AGGAGGAGCTGATTATGAAA+GGG - chr6.3:55421078-55421097 MS.gene021364:intron 40.0%
AGGTAAGAATCGGTAGAATC+AGG - chr6.3:55420198-55420217 MS.gene021364:intron 40.0%
CAAACTTATAGCCCGTGAAA+AGG - chr6.3:55421843-55421862 MS.gene021364:intron 40.0%
CAAAGGGTAATTGTCCATGA+AGG + chr6.3:55421136-55421155 None:intergenic 40.0%
CACAGTGCAGTAACTTTCAT+CGG + chr6.3:55421110-55421129 None:intergenic 40.0%
CAGGTAAAAGGATGTTGCAT+TGG + chr6.3:55422982-55423001 None:intergenic 40.0%
CTGTTTGCATTCAAAGACGA+TGG - chr6.3:55420149-55420168 MS.gene021364:CDS 40.0%
GACAACAAGCAAACATCATG+AGG - chr6.3:55421466-55421485 MS.gene021364:CDS 40.0%
GAGGAGATAGACTATTTGGT+TGG - chr6.3:55421273-55421292 MS.gene021364:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG - chr6.3:55422578-55422597 MS.gene021364:CDS 40.0%
GGAAGATCTTCAACAAACAC+TGG - chr6.3:55422605-55422624 MS.gene021364:CDS 40.0%
GGATCCAACGAAAATTAAGG+AGG - chr6.3:55421061-55421080 MS.gene021364:intron 40.0%
GTTTGCTTTCCTATTGTCCT+CGG + chr6.3:55421390-55421409 None:intergenic 40.0%
TCCTTACTCTATGGACCATT+CGG - chr6.3:55422129-55422148 MS.gene021364:intron 40.0%
TGTTGAATTTGGAGGACAGT+GGG - chr6.3:55421160-55421179 MS.gene021364:intron 40.0%
TTCGCGAAGTTATTGTACCT+TGG + chr6.3:55423453-55423472 None:intergenic 40.0%
TTGCTCCATCACTTTCCTTA+GGG + chr6.3:55421501-55421520 None:intergenic 40.0%
TTGGAGATTGAACAGCTGAA+AGG - chr6.3:55422474-55422493 MS.gene021364:CDS 40.0%
TTGTTGAATTTGGAGGACAG+TGG - chr6.3:55421159-55421178 MS.gene021364:intron 40.0%
TTTCTCCTGATACTTGCGTT+CGG + chr6.3:55421773-55421792 None:intergenic 40.0%
TTTGCTCCATCACTTTCCTT+AGG + chr6.3:55421502-55421521 None:intergenic 40.0%
! AAACACCGAACGTTTTGCAT+TGG + chr6.3:55422924-55422943 None:intergenic 40.0%
! AGCTCCTCCTTAATTTTCGT+TGG + chr6.3:55421068-55421087 None:intergenic 40.0%
! ATCCTTTTACCTGAATCACG+TGG - chr6.3:55422989-55423008 MS.gene021364:CDS 40.0%
! CTTTTGCAGATCCTTTTCAC+GGG + chr6.3:55421857-55421876 None:intergenic 40.0%
! GCTTTTGCAGATCCTTTTCA+CGG + chr6.3:55421858-55421877 None:intergenic 40.0%
! TCAACAAACACTGGTTGTTC+AGG - chr6.3:55422614-55422633 MS.gene021364:CDS 40.0%
! TTGCCCATTTTGCTACAACA+AGG - chr6.3:55420665-55420684 MS.gene021364:CDS 40.0%
!! CGCATCTTGCTGATTTCTAA+TGG + chr6.3:55421745-55421764 None:intergenic 40.0%
!!! GTTTTGAGGACTCTTTTGGT+TGG - chr6.3:55422370-55422389 MS.gene021364:CDS 40.0%
AATCAGGCGAGGTCTATGAA+AGG - chr6.3:55420214-55420233 MS.gene021364:intron 45.0%
ACCGAATGGTCCATAGAGTA+AGG + chr6.3:55422133-55422152 None:intergenic 45.0%
AGACACACGTCCACAATTGT+GGG - chr6.3:55420714-55420733 MS.gene021364:intron 45.0%
AGCGGGATTACTTGGGTTTA+CGG - chr6.3:55421240-55421259 MS.gene021364:CDS 45.0%
AGTGTCCCTAAGGAAAGTGA+TGG - chr6.3:55421493-55421512 MS.gene021364:intron 45.0%
ATGAGTACAACCCTAGTGGT+CGG - chr6.3:55423813-55423832 MS.gene021364:intron 45.0%
ATGCAAGTCACCCACAATTG+TGG + chr6.3:55420727-55420746 None:intergenic 45.0%
CAAACACCTCCAGGAAAAAG+GGG - chr6.3:55421337-55421356 MS.gene021364:CDS 45.0%
CGATGAAAGTTACTGCACTG+TGG - chr6.3:55421108-55421127 MS.gene021364:intron 45.0%
CTCTTAGCTGCTTCCAGAAA+TGG + chr6.3:55423266-55423285 None:intergenic 45.0%
GAAAAGAAGCCGAGGACAAT+AGG - chr6.3:55421378-55421397 MS.gene021364:CDS 45.0%
GAATGTTGCTAAGGGTTCGT+TGG - chr6.3:55420926-55420945 MS.gene021364:intron 45.0%
GAGCGAGGAGATAGACTATT+TGG - chr6.3:55421269-55421288 MS.gene021364:CDS 45.0%
GCAAACACCTCCAGGAAAAA+GGG - chr6.3:55421336-55421355 MS.gene021364:CDS 45.0%
GGATCATGAAAATGCCAGTC+TGG - chr6.3:55421801-55421820 MS.gene021364:intron 45.0%
GGCAATAGCAGAGCAACAAA+AGG - chr6.3:55422249-55422268 MS.gene021364:intron 45.0%
GGGGATTTGAAAACGGTTTC+TGG - chr6.3:55421356-55421375 MS.gene021364:CDS 45.0%
TATAGTTGGCAAACACCTCC+AGG - chr6.3:55421328-55421347 MS.gene021364:CDS 45.0%
TCACTAGCAGTACTAACAGC+AGG + chr6.3:55420861-55420880 None:intergenic 45.0%
TGCAGTAGCTACAACTCTGA+AGG - chr6.3:55423784-55423803 MS.gene021364:intron 45.0%
TGTGGTAAGCGGGATTACTT+GGG - chr6.3:55421233-55421252 MS.gene021364:CDS 45.0%
TTACTTGGGTTTACGGAAGC+AGG - chr6.3:55421247-55421266 MS.gene021364:CDS 45.0%
! TCAAATCCCCTTTTTCCTGG+AGG + chr6.3:55421346-55421365 None:intergenic 45.0%
AAGGAAGGCTTCGTTGAAGG+AGG - chr6.3:55423871-55423890 MS.gene021364:intron 50.0%
AATCGAGTGGTGCTCGAAGT+GGG - chr6.3:55423364-55423383 MS.gene021364:intron 50.0%
ACAGCTGAAAGGAGCTTTCC+AGG - chr6.3:55422485-55422504 MS.gene021364:CDS 50.0%
ACTGCACTGTGGAACCTTCA+TGG - chr6.3:55421119-55421138 MS.gene021364:intron 50.0%
AGAAATCAGCAAGATGCGGC+AGG - chr6.3:55421747-55421766 MS.gene021364:intron 50.0%
AGAATCGGTAGAATCAGGCG+AGG - chr6.3:55420203-55420222 MS.gene021364:intron 50.0%
AGCAATCAGAATGGAGCTGC+AGG - chr6.3:55422557-55422576 MS.gene021364:CDS 50.0%
AGGAAGGAAGGCTTCGTTGA+AGG - chr6.3:55423868-55423887 MS.gene021364:intron 50.0%
AGGAAGGCTTCGTTGAAGGA+GGG - chr6.3:55423872-55423891 MS.gene021364:intron 50.0%
CAGAATGGAGCTGCAGGAAA+AGG - chr6.3:55422563-55422582 MS.gene021364:CDS 50.0%
CTGTGGTAAGCGGGATTACT+TGG - chr6.3:55421232-55421251 MS.gene021364:CDS 50.0%
GAATTTGGAGGACAGTGGGA+TGG - chr6.3:55421164-55421183 MS.gene021364:intron 50.0%
GAGACACACGTCCACAATTG+TGG - chr6.3:55420713-55420732 MS.gene021364:intron 50.0%
GGCAAACACCTCCAGGAAAA+AGG - chr6.3:55421335-55421354 MS.gene021364:CDS 50.0%
TAGTGGTCGGTACCCAATAC+CGG - chr6.3:55423826-55423845 MS.gene021364:intron 50.0%
! GGTTTCTGGAAAAGAAGCCG+AGG - chr6.3:55421370-55421389 MS.gene021364:CDS 50.0%
! TGAAAATGCCAGTCTGGAGC+TGG - chr6.3:55421807-55421826 MS.gene021364:intron 50.0%
! TGTGGGTGACTTGCATGAGA+CGG - chr6.3:55420731-55420750 MS.gene021364:intron 50.0%
!! AGCTTTCTAGCAGAGCACTG+TGG - chr6.3:55421215-55421234 MS.gene021364:CDS 50.0%
!! ATGAGGCGAAAGTGTCCCTA+AGG - chr6.3:55421483-55421502 MS.gene021364:intron 50.0%
!! GTATTGGGTACCGACCACTA+GGG + chr6.3:55423826-55423845 None:intergenic 50.0%
!! TAGCAGAGCACTGTGGTAAG+CGG - chr6.3:55421222-55421241 MS.gene021364:CDS 50.0%
CAATCGAGTGGTGCTCGAAG+TGG - chr6.3:55423363-55423382 MS.gene021364:intron 55.0%
GAAGGATGAGTTCGGGGATG+AGG - chr6.3:55423754-55423773 MS.gene021364:intron 55.0%
GGAAGAGGAATTAGAGGGGG+TGG - chr6.3:55422584-55422603 MS.gene021364:CDS 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG - chr6.3:55422569-55422588 MS.gene021364:CDS 55.0%
GGTACCCAATACCGGAACTC+TGG - chr6.3:55423834-55423853 MS.gene021364:intron 55.0%
TCATGACCTGGAGAGAGGAC+TGG - chr6.3:55422431-55422450 MS.gene021364:CDS 55.0%
TTGCATCCAGTCCTCTCTCC+AGG + chr6.3:55422440-55422459 None:intergenic 55.0%
! CCAGTCTGGAGCTGGAAGTT+CGG - chr6.3:55421815-55421834 MS.gene021364:intron 55.0%
!! AGCAGAGCACTGTGGTAAGC+GGG - chr6.3:55421223-55421242 MS.gene021364:CDS 55.0%
!! GGTATTGGGTACCGACCACT+AGG + chr6.3:55423827-55423846 None:intergenic 55.0%
CCGAACTTCCAGCTCCAGAC+TGG + chr6.3:55421818-55421837 None:intergenic 60.0%
GCAGGCCGAACGCAAGTATC+AGG - chr6.3:55421765-55421784 MS.gene021364:intron 60.0%
GGTTTACGGAAGCAGGAGCG+AGG - chr6.3:55421254-55421273 MS.gene021364:CDS 60.0%
! GTCTGGAGCTGGAAGTTCGG+AGG - chr6.3:55421818-55421837 MS.gene021364:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 55419947 55423949 55419947 ID=MS.gene021364
chr6.3 mRNA 55419947 55423949 55419947 ID=MS.gene021364.t1;Parent=MS.gene021364
chr6.3 exon 55423926 55423949 55423926 ID=MS.gene021364.t1.exon1;Parent=MS.gene021364.t1
chr6.3 CDS 55423926 55423949 55423926 ID=cds.MS.gene021364.t1;Parent=MS.gene021364.t1
chr6.3 exon 55422345 55423353 55422345 ID=MS.gene021364.t1.exon2;Parent=MS.gene021364.t1
chr6.3 CDS 55422345 55423353 55422345 ID=cds.MS.gene021364.t1;Parent=MS.gene021364.t1
chr6.3 exon 55421966 55422147 55421966 ID=MS.gene021364.t1.exon3;Parent=MS.gene021364.t1
chr6.3 CDS 55421966 55422147 55421966 ID=cds.MS.gene021364.t1;Parent=MS.gene021364.t1
chr6.3 exon 55421210 55421494 55421210 ID=MS.gene021364.t1.exon4;Parent=MS.gene021364.t1
chr6.3 CDS 55421210 55421494 55421210 ID=cds.MS.gene021364.t1;Parent=MS.gene021364.t1
chr6.3 exon 55420442 55420705 55420442 ID=MS.gene021364.t1.exon5;Parent=MS.gene021364.t1
chr6.3 CDS 55420442 55420705 55420442 ID=cds.MS.gene021364.t1;Parent=MS.gene021364.t1
chr6.3 exon 55419947 55420180 55419947 ID=MS.gene021364.t1.exon6;Parent=MS.gene021364.t1
chr6.3 CDS 55419947 55420180 55419947 ID=cds.MS.gene021364.t1;Parent=MS.gene021364.t1
Gene Sequence

>MS.gene021364

ATGTTTCATTCTTTATTCTGCTTGGTAATAGCTTTTTCTCTTCAACTTAATAATCATCTATTTCAAAATCACTTATTTCATAGTAAGATTTTCGTCTAAATAATATCCACATTTTACTTTGAGCTTATTTTTAGTTGTTGTTGGTATCTCTTTGTTAGTGTATCCCTTTCTTTCTAGTTGATTTTATGATTCTCATTATTTACTGTTTGCATTCAAAGACGATGGTTTTAATTCATAATGTTTCACATTTTAGGTAAGAATCGGTAGAATCAGGCGAGGTCTATGAAAGGAATAGATTTTCTTTGTTAATTTCTCATATCGTTTCATACTGGTTCATAATTTATACTGATTATTGTGTACTTAATTATTTATAATCTGATTTTTTCATAATCGATTTATTTCTTTTTAGTATAGTTTTGAGTGTCTGAACAAAAATCATAAGGACAATGATATTATTATCGTTGTAATCATAAACTCATAATAATTAAATCATCTATTCTATACTTTACTTTTTCATGGCTTCATTTTAGTCGATTTATGTAGCAGCTATTGTTTAGCAACTTCTTTGGAATTGATTTTATGATTTTCATTTTCAGATGTACCAAAATTTAGAATATACTCGTGAATCTGATTTGGAGTACTACAAACGCATATATTACAAAGACTTGAAAGATGATTACTACAAGGACAAACTCAAAATATCTGATTCAACATATCGTTGCCCATTTTGCTACAACAAGGACTACTACTCTTTGAGTGAGCTATTGAGACACACGTCCACAATTGTGGGTGACTTGCATGAGACGGTTAAAGATATTGCTAAGCATTCAGCTCTTGAAATGTATATTGAAAGCTACGGTGATGTTAAAGTTGGTAAAGATAAGTCTCCTGTTGTTCGTAATGATAAGTCACCTGCTGTTAGTACTGCTAGTGATAAGTCAATTAATTTTAGTATCACTAACGAGAAGTCACTTGTTAAGAATGTTGCTAAGGGTTCGTTGGTTAATGTGAATTTGGGTGATGATGATGATGAGTTGTTTGTATATCCATGGATGGTCATTTTGAAAAATATTGTTACTGGTTTTAACCCAAAAAGTAGAAAGTATGTTGCGAAGGATCCAACGAAAATTAAGGAGGAGCTGATTATGAAAGGGTTTCATCCGATGAAAGTTACTGCACTGTGGAACCTTCATGGACAATTACCCTTTGCAATTGTTGAATTTGGAGGACAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAAAGGAGCTTTCTAGCAGAGCACTGTGGTAAGCGGGATTACTTGGGTTTACGGAAGCAGGAGCGAGGAGATAGACTATTTGGTTGGATGGCACGTCGTGATGACTATGATATCAAGGATATAGTTGGCAAACACCTCCAGGAAAAAGGGGATTTGAAAACGGTTTCTGGAAAAGAAGCCGAGGACAATAGGAAAGCAAACAAGCTTGTCTCTGGTTTGGAAAATACCTTAAAGCTGAAGACCAATGAATTGGAACAGACAACAAGCAAACATCATGAGGCGAAAGTGTCCCTAAGGAAAGTGATGGAGCAAAAAGAGAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAATTAAATTGAATTGATCCAATATTGGTATTCCTTCTCATTGATTTAAAGGTGAAACATTATCATTTTTACTAATATATCTATGATTTTGGTTAGCTTACATTCTATTGCATTTTCGAATGATTTATAGTTGATATGATATTTTAATATTTCATGGTAGCTGAGTCTGTTTCATATTGTTCCATTAGAAATCAGCAAGATGCGGCAGGCCGAACGCAAGTATCAGGAGAAAGTATCTAAGGATCATGAAAATGCCAGTCTGGAGCTGGAAGTTCGGAGGAACAAACTTATAGCCCGTGAAAAGGATCTGCAAAAGCGTCAAGAAGATAATCATAATGAGAGAACCAAGCTATATTTTGAGAAGAAGCAGGTAATGTATTTTGGCTCTTTGAATTTATCGTAGCAAAGCTAGATAAATAATTCTAACTTTTTAACTCTCTCATGAACACATTTTTTCTGATAGTGTGTTTCTAAAATTGTAACACATTTCTTTGAAAGTGATCAATTTACAGGAGAACTAAATTGGCTTCTTTAAAAATGGACCAATCACAAAGAGTGTTGTTAGCATTCCTTACTCTATGGACCATTCGGTTTTTTGTATCAAATTACGTACACCAATCCCTCTTATTTTTTAATAACTTATGACGAATTAAATTCGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCAATAGCAGAGCAACAAAAGGCTCGTGAAAAAATGATGTATTTGGCAGAAGAACATAAGGCACGTAGTTCATTTTCCTATTATCTACAGTTTTTAATTAAGTTACATGTATATACTTGAGTTTTGAGGACTCTTTTGGTTGGATGTTGCAGAAAGAAAAAGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTGGATGCAAAACAAGCATTGGAATTGGAGATTGAACAGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTAGAGATACTGATCTAGATGAGAAGAAAAAATTGGAAGCAATCAGAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGGGTGGAAGATCTTCAACAAACACTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGCTAATAAGTGTATGTCTTCCGTAACCAATCTTTTACAAAGTCGGGATAGGTTTTTTATTTGTAAAAATTTCCTTGTTAAATCTAAGCATAAATGTAGGATAATTTATATTTTTTAATTGACATAAAATTGTTTTATAATAATTATAGAAGAGTGTCCTATTTTGCAAACATTCAAATCATGTTTTTGGAATCTTATTTAAGTTGCTTGGAAGACAGTGTCTTGTTCACATGTATTTACAACAGCCAATGCAAAACGTTCGGTGTTTTCATCCTAGTTTCTATATCTAAGGAATTAAATTTTCCAATGCAACATCCTTTTACCTGAATCACGTGGTTACTTGTTTCAACTATATATCAGCTATCTAGTTGTTTGACTCTAAAGATGATGATTTTAATACATAAAGTTTTACATTTTATGTGAAAATTGGTAGAATCGGGTCAAGTTTATGAGAAGAGCATATTTTCTTCATACATTTTTAGTTAATATGTCATGATTTCATTGTTTGTTCATAGTGGATTGGCTGCCCAAAGAACAACACTCAAGCTATAATTTCTGTGAAAAGGATGGGTGAACTTGATATTAAGCCATTTCTGGAAGCAGCTAAGAGAAAATTTTCTAATGAAATGAATGAGAAAGCAGCAACTAAGACTAAGAGAAAACTTTCAGAGGCAGAGAAAATAAAAGCAATCGAGTGGTGCTCGAAGTGGGAAGACTGTGTTAAAGATCCAAATTGGCATCCGTTCAAAGTTGTAACTGATAAAGAAGGAAACTCCAAGGTACAATAACTTCGCGAATTATGTTTTTTCGTTAAAGTTAATATTTTTTTCTCAACAGTTCTATTACGACAATGTTGGATATATTTATCCCCTAAAGCATATAATGCAGCATTTCTTATTAATTAGAAAGAATAGTAATTGGTACTGTGTAGGGATCTATTTACTGAAGCTTGCTGTTGTTAGCACTTATTTGGTTTTATTTGTTTCCCTTCTATGAACTGCATAAAATATGATCTAATATATGTTAGATATATTTCACAGGAAATTTTAGACGGAGAAGATGAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAACTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTCGGTACCCAATACCGGAACTCTGGAATTTTAAAGAAGGAAGGAAGGCTTCGTTGAAGGAGGGTGTTTCCCATTTAATTAAGCAATGGAAATCAAATAAGGGAAAGAAAACTTATTGA
Protein sequence

>MS.gene021364.t1

MFHSLFCLMYQNLEYTRESDLEYYKRIYYKDLKDDYYKDKLKISDSTYRCPFCYNKDYYSLSELLRHTSTIVGDLHETVKDIAKHSALEMYIESYGDVKVGKDKSPVVRNDKSPAVSTASDKSINFSITNEKSLVKNVAKGSLVNVNLGDDDDELFVYPWMVILKNIVTGFNPKSRKYVAKDPTKIKEELIMKGFHPMKVTALWNLHGQLPFAIVEFGGQWDGFHNAMKLERSFLAEHCGKRDYLGLRKQERGDRLFGWMARRDDYDIKDIVGKHLQEKGDLKTVSGKEAEDNRKANKLVSGLENTLKLKTNELEQTTSKHHEAKVSLRKVMEQKEKMLEHFNKEISKMRQAERKYQEKVSKDHENASLELEVRRNKLIAREKDLQKRQEDNHNERTKLYFEKKQKEKEKLHKKIHDLERGLDAKQALELEIEQLKGAFQVMNHIRDTDLDEKKKLEAIRMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLISWIGCPKNNTQAIISVKRMGELDIKPFLEAAKRKFSNEMNEKAATKTKRKLSEAEKIKAIEWCSKWEDCVKDPNWHPFKVVTDKEGNSKEILDGEDEKLKSLKDEFGDEVHDAVATTLKELNEYNPSGRYPIPELWNFKEGRKASLKEGVSHLIKQWKSNKGKKTY