Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021399.t1 | XP_003588386.2 | 97.7 | 710 | 16 | 0 | 1 | 710 | 1 | 710 | 0.00E+00 | 1401.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021399.t1 | Q8RXH2 | 65.3 | 707 | 238 | 4 | 9 | 710 | 11 | 715 | 1.6e-275 | 949.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021399.t1 | G7IB50 | 97.7 | 710 | 16 | 0 | 1 | 710 | 1 | 710 | 0.0e+00 | 1401.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006962 | MS.gene021399 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021399.t1 | MTR_1g006690 | 97.746 | 710 | 16 | 0 | 1 | 710 | 1 | 710 | 0.0 | 1431 |
| MS.gene021399.t1 | MTR_1g006690 | 96.761 | 494 | 16 | 0 | 217 | 710 | 33 | 526 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021399.t1 | AT4G32910 | 65.254 | 708 | 239 | 4 | 8 | 710 | 10 | 715 | 0.0 | 947 |
Find 187 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCAATTGGATGCACTTC+TGG | 0.108372 | 1.2:-12400458 | None:intergenic |
| AACTGGACTGCAGTCCATTT+TGG | 0.169208 | 1.2:+12400130 | MS.gene021399:CDS |
| AACAGTTGAAGTTGCTAAAT+TGG | 0.174426 | 1.2:+12406223 | MS.gene021399:intron |
| TGAATCTGCTGCTGGAAATT+TGG | 0.191846 | 1.2:+12399939 | MS.gene021399:CDS |
| GGAAGGCTTAATTGAGTTAT+TGG | 0.193560 | 1.2:+12402056 | MS.gene021399:CDS |
| AGGACGTAATCGAGGCATTT+TGG | 0.226952 | 1.2:-12399917 | None:intergenic |
| TGACATCACTTCCCAATATC+TGG | 0.236955 | 1.2:-12399500 | None:intergenic |
| ATGCAAGATGTTAAATATAT+TGG | 0.247787 | 1.2:-12401383 | None:intergenic |
| CATCAACCCCTCAGCGCTTT+TGG | 0.251093 | 1.2:+12404199 | MS.gene021399:CDS |
| TCTGTACAGCTTCATGTTAC+TGG | 0.282003 | 1.2:+12400229 | MS.gene021399:CDS |
| AACCAATCAACAAGCCTTTC+GGG | 0.292392 | 1.2:-12396127 | None:intergenic |
| GTAAAGGTGCTGGAGTATTT+TGG | 0.298412 | 1.2:+12401808 | MS.gene021399:CDS |
| GGTTGCTGAGCTGGTCTAAT+TGG | 0.308819 | 1.2:-12399670 | None:intergenic |
| TCATTTGGATCTTCAATTAT+CGG | 0.309234 | 1.2:-12395904 | None:intergenic |
| GTTCCGTTGTCGACGGTGTT+GGG | 0.320387 | 1.2:-12394367 | None:intergenic |
| AGTAGAAAGCATGTATAATT+TGG | 0.322991 | 1.2:+12400434 | MS.gene021399:CDS |
| CAAACTTCAAGAGTTATCTT+TGG | 0.325826 | 1.2:+12406293 | MS.gene021399:CDS |
| GAATCTGCTGCTGGAAATTT+GGG | 0.332696 | 1.2:+12399940 | MS.gene021399:CDS |
| GAGGTCACAAATTACTAAAC+TGG | 0.342916 | 1.2:+12400113 | MS.gene021399:CDS |
| ATTAAACTTACGATCATAAA+TGG | 0.349521 | 1.2:-12400288 | None:intergenic |
| TCGGTGGTTCAGTTAGAAAA+TGG | 0.352849 | 1.2:+12399865 | MS.gene021399:intron |
| TCGAGGATGATCCCAGATAT+TGG | 0.361641 | 1.2:+12399488 | MS.gene021399:CDS |
| TAACCAATCAACAAGCCTTT+CGG | 0.362173 | 1.2:-12396128 | None:intergenic |
| TTATCACACTGAATCCAAAA+TGG | 0.362532 | 1.2:-12400144 | None:intergenic |
| AGTACCTTAACAATTTCATT+TGG | 0.365739 | 1.2:-12395919 | None:intergenic |
| TTTCGCCGGAGAATGGGATT+AGG | 0.367192 | 1.2:-12394390 | None:intergenic |
| TTGTTGGTTTCGCCGGAGAA+TGG | 0.370686 | 1.2:-12394397 | None:intergenic |
| GCAGAAATTTCCAGAGAATT+CGG | 0.377381 | 1.2:+12400659 | MS.gene021399:CDS |
| TTTCAATTGGATGCACTTCT+GGG | 0.377909 | 1.2:-12400457 | None:intergenic |
| TTATTTCCTTGCTATATTGA+AGG | 0.384106 | 1.2:-12395846 | None:intergenic |
| ACACAACAACGTGTTGCTTA+AGG | 0.387208 | 1.2:+12401457 | MS.gene021399:CDS |
| AAATTTCCAGCAGCAGATTC+AGG | 0.388449 | 1.2:-12399937 | None:intergenic |
| GAAGGCTTAATTGAGTTATT+GGG | 0.393418 | 1.2:+12402057 | MS.gene021399:CDS |
| TACCAGTAGGTGGTTTCAAT+TGG | 0.394720 | 1.2:-12400470 | None:intergenic |
| GGTTCCGTTGTCGACGGTGT+TGG | 0.395020 | 1.2:-12394368 | None:intergenic |
| TTCGCCGGAGAATGGGATTA+GGG | 0.395335 | 1.2:-12394389 | None:intergenic |
| CTCAAGCACTGAGTTCTATT+AGG | 0.397034 | 1.2:+12406355 | MS.gene021399:CDS |
| TTGTTTAATATATAGGTTGC+CGG | 0.399122 | 1.2:+12401762 | MS.gene021399:intron |
| CGAGGATGATCCCAGATATT+GGG | 0.408443 | 1.2:+12399489 | MS.gene021399:CDS |
| TACCCGAAAGGCTTGTTGAT+TGG | 0.409791 | 1.2:+12396125 | MS.gene021399:CDS |
| GAGATTGCGAGGCGAGAGAC+TGG | 0.414769 | 1.2:-12394463 | None:intergenic |
| TGTAAATTAATACCAGTATG+AGG | 0.416262 | 1.2:-12402300 | None:intergenic |
| GGATCTTCAATTATCGGACT+AGG | 0.419791 | 1.2:-12395898 | None:intergenic |
| AAACTTGCTACAAGTTATGC+TGG | 0.419969 | 1.2:+12400191 | MS.gene021399:CDS |
| TACTTTGATAAAGTCAGGCT+TGG | 0.420018 | 1.2:-12399977 | None:intergenic |
| ACATGATGAGCGTTATAACT+TGG | 0.421274 | 1.2:+12400981 | MS.gene021399:CDS |
| TGTTGGTTTCGCCGGAGAAT+GGG | 0.423799 | 1.2:-12394396 | None:intergenic |
| CTTCTACGTATCAGTTAGAT+TGG | 0.423908 | 1.2:+12394701 | MS.gene021399:CDS |
| CTGGCTCTAGCAACAAATCT+TGG | 0.425294 | 1.2:+12406378 | MS.gene021399:CDS |
| GAAAGCTGCATGGGAGTTGA+TGG | 0.426543 | 1.2:+12396066 | MS.gene021399:CDS |
| TGGAATTCTTGGAGAAAATA+CGG | 0.426634 | 1.2:+12400518 | MS.gene021399:CDS |
| AAGATACAAACAGTCTTGAT+AGG | 0.434188 | 1.2:+12401844 | MS.gene021399:CDS |
| GGATATACTTTGATAAAGTC+AGG | 0.436579 | 1.2:-12399982 | None:intergenic |
| ATGAATTGTTTCTTGTGTAC+TGG | 0.437719 | 1.2:-12396272 | None:intergenic |
| GAATGATCTTGTTAACATAC+AGG | 0.439241 | 1.2:+12396315 | MS.gene021399:CDS |
| CAACAGTTATTTGATTCAGT+TGG | 0.446597 | 1.2:+12401873 | MS.gene021399:CDS |
| TCAGTTAGAAAATGGATTAG+TGG | 0.447691 | 1.2:+12399873 | MS.gene021399:intron |
| AGATCCAAATGAAATTGTTA+AGG | 0.453618 | 1.2:+12395915 | MS.gene021399:CDS |
| GCTTCTCGCAGGGCCAAAGT+TGG | 0.454492 | 1.2:+12395873 | MS.gene021399:CDS |
| TTGAGAGGGTTCTGCGAAAA+GGG | 0.457568 | 1.2:-12394515 | None:intergenic |
| TTAAAAGTCCAGTCAACCTA+TGG | 0.457677 | 1.2:-12400494 | None:intergenic |
| AGACTGGACGGGTGAGGTTG+TGG | 0.459559 | 1.2:-12394447 | None:intergenic |
| TTCCGTTGTCGACGGTGTTG+GGG | 0.462046 | 1.2:-12394366 | None:intergenic |
| AGTACACAAGAAACAATTCA+TGG | 0.462245 | 1.2:+12396274 | MS.gene021399:CDS |
| CAAAAGCGCTGAGGGGTTGA+TGG | 0.463978 | 1.2:-12404198 | None:intergenic |
| TTTCCAGAGAATTCGGTCCT+TGG | 0.465642 | 1.2:+12400666 | MS.gene021399:CDS |
| CAATCTAACTGATACGTAGA+AGG | 0.467504 | 1.2:-12394700 | None:intergenic |
| CACTGGAAGCATGGTCGTAA+AGG | 0.470394 | 1.2:+12401792 | MS.gene021399:CDS |
| TTTGAGAGGGTTCTGCGAAA+AGG | 0.472770 | 1.2:-12394516 | None:intergenic |
| ATACCTCACGGTTGCTGAGC+TGG | 0.475934 | 1.2:-12399679 | None:intergenic |
| CCCTCTCAAACCTCCGATGC+CGG | 0.476944 | 1.2:+12394529 | MS.gene021399:CDS |
| TTTCTTGTGTACTGGTAAAG+AGG | 0.478084 | 1.2:-12396264 | None:intergenic |
| CTTCTCGCAGGGCCAAAGTT+GGG | 0.478245 | 1.2:+12395874 | MS.gene021399:CDS |
| GCCGTGGAATTGTTAACTGC+AGG | 0.479206 | 1.2:+12400934 | MS.gene021399:CDS |
| ATCGGACTAGGGCCCAACTT+TGG | 0.480084 | 1.2:-12395886 | None:intergenic |
| AGCTGTAGACTCCCTCATAC+TGG | 0.480950 | 1.2:+12402288 | MS.gene021399:CDS |
| TCTCTCGCCTCGCAATCTCC+TGG | 0.481211 | 1.2:+12394467 | MS.gene021399:CDS |
| TTACGTCCTGAATCTGCTGC+TGG | 0.483641 | 1.2:+12399931 | MS.gene021399:CDS |
| TCACCAAGGACCGAATTCTC+TGG | 0.484642 | 1.2:-12400669 | None:intergenic |
| GGGTGAGGTTGTGGTGGAGA+GGG | 0.484691 | 1.2:-12394438 | None:intergenic |
| TAATAGAACTCAGTGCTTGA+GGG | 0.485123 | 1.2:-12406353 | None:intergenic |
| CGGGTGAGGTTGTGGTGGAG+AGG | 0.485435 | 1.2:-12394439 | None:intergenic |
| CTTAGCGCCGTCTCCGGCAT+CGG | 0.487035 | 1.2:-12394542 | None:intergenic |
| GTGAAAATGTTGCGGTTGCA+TGG | 0.492578 | 1.2:+12399641 | MS.gene021399:CDS |
| TCTTGCATGAAGCAAGGAAT+GGG | 0.493653 | 1.2:+12401398 | MS.gene021399:CDS |
| GAGGGAGTTGCCGCGGGACC+AGG | 0.495115 | 1.2:-12394485 | None:intergenic |
| AGTTGGTTGGCTAGATATAG+TGG | 0.495746 | 1.2:+12399534 | MS.gene021399:CDS |
| GACGCGGAGGGAGTTGCCGC+GGG | 0.496115 | 1.2:-12394491 | None:intergenic |
| CGACTCTGAAGCAACGCAAA+CGG | 0.501415 | 1.2:-12394646 | None:intergenic |
| CTAATAGAACTCAGTGCTTG+AGG | 0.501748 | 1.2:-12406354 | None:intergenic |
| AGAATTGTTGTTGGTTTCGC+CGG | 0.503079 | 1.2:-12394404 | None:intergenic |
| AGCACTGAGTTCTATTAGGC+TGG | 0.504352 | 1.2:+12406359 | MS.gene021399:CDS |
| TTGTGACCTCCATTTCTCCC+AGG | 0.507500 | 1.2:-12400100 | None:intergenic |
| CGGAGATTGATGATGCTGAT+TGG | 0.511466 | 1.2:+12394596 | MS.gene021399:CDS |
| GAAATAACATCGCTTCTCGC+AGG | 0.511507 | 1.2:+12395862 | MS.gene021399:CDS |
| AAGCATGGTCGTAAAGGTGC+TGG | 0.514756 | 1.2:+12401798 | MS.gene021399:CDS |
| GGATCTGAATCTAAGCCTGC+TGG | 0.515189 | 1.2:+12402078 | MS.gene021399:CDS |
| GGGGCAGCCAAAAGCGCTGA+GGG | 0.516515 | 1.2:-12404206 | None:intergenic |
| TAAGCTCGGAGGTGGAGATC+CGG | 0.518121 | 1.2:+12394576 | MS.gene021399:CDS |
| GATCTTCAATTATCGGACTA+GGG | 0.522407 | 1.2:-12395897 | None:intergenic |
| CATGATGAGCGTTATAACTT+GGG | 0.523441 | 1.2:+12400982 | MS.gene021399:CDS |
| ATCCAATTGAAACCACCTAC+TGG | 0.531263 | 1.2:+12400468 | MS.gene021399:CDS |
| GACATCACTTCCCAATATCT+GGG | 0.533296 | 1.2:-12399499 | None:intergenic |
| ATCGAAGTTAAGCTCGGAGG+TGG | 0.533414 | 1.2:+12394568 | MS.gene021399:CDS |
| GATTGGCGAAGAATTGCATA+TGG | 0.534205 | 1.2:+12394613 | MS.gene021399:CDS |
| ACTGGTACCCATAGGTTGAC+TGG | 0.536812 | 1.2:+12400486 | MS.gene021399:CDS |
| ATCTTGCATGAAGCAAGGAA+TGG | 0.537314 | 1.2:+12401397 | MS.gene021399:CDS |
| AGGTTGCCGGAGTCTATCAC+TGG | 0.538321 | 1.2:+12401775 | MS.gene021399:intron |
| CAATCAGCATCATCAATCTC+CGG | 0.538504 | 1.2:-12394595 | None:intergenic |
| AACAATTCATGGCAAGCTAG+TGG | 0.539756 | 1.2:+12396285 | MS.gene021399:CDS |
| GCTGCCCCTTCTGGTTGACT+CGG | 0.543207 | 1.2:+12404221 | MS.gene021399:CDS |
| TTCCACTGTATACCATCTGA+AGG | 0.545916 | 1.2:-12402243 | None:intergenic |
| GATAACCTTAGCGCCGTCTC+CGG | 0.547965 | 1.2:-12394548 | None:intergenic |
| TTGCGTTGCTTCAGAGTCGC+CGG | 0.548587 | 1.2:+12394650 | MS.gene021399:CDS |
| AGTTAGGCTCAGTGAAGTGC+GGG | 0.549137 | 1.2:-12406326 | None:intergenic |
| GATTGCGAGAGAATTGTTGT+TGG | 0.550735 | 1.2:-12394413 | None:intergenic |
| GGCGAGAGACTGGACGGGTG+AGG | 0.552042 | 1.2:-12394453 | None:intergenic |
| CATCTGCATTGTCAGTTGGT+TGG | 0.554242 | 1.2:+12399521 | MS.gene021399:CDS |
| TCCGGCATCGGAGGTTTGAG+AGG | 0.555047 | 1.2:-12394530 | None:intergenic |
| CATGCAGCTTTCAAACATGT+TGG | 0.555788 | 1.2:-12396055 | None:intergenic |
| TCAGTATGGTGGAACTTCAT+CGG | 0.561377 | 1.2:+12401010 | MS.gene021399:CDS |
| GTAAATTAATACCAGTATGA+GGG | 0.568574 | 1.2:-12402299 | None:intergenic |
| ATGTCATCTGCATTGTCAGT+TGG | 0.568749 | 1.2:+12399517 | MS.gene021399:CDS |
| TAGGATGGTTGCACATGCCG+TGG | 0.570521 | 1.2:+12400918 | MS.gene021399:intron |
| TATCATCACATGCATTGACA+TGG | 0.570630 | 1.2:+12401052 | MS.gene021399:CDS |
| AACATGTTTGAAAGCTGCAT+GGG | 0.571606 | 1.2:+12396057 | MS.gene021399:CDS |
| AGACGCGGAGGGAGTTGCCG+CGG | 0.572276 | 1.2:-12394492 | None:intergenic |
| CTCAAGCATGGCTACCCGAA+AGG | 0.573702 | 1.2:+12396113 | MS.gene021399:CDS |
| TCCACTGTATACCATCTGAA+GGG | 0.574565 | 1.2:-12402242 | None:intergenic |
| CAACATGTTTGAAAGCTGCA+TGG | 0.581798 | 1.2:+12396056 | MS.gene021399:CDS |
| TAAAAGTCCAGTCAACCTAT+GGG | 0.583832 | 1.2:-12400493 | None:intergenic |
| CGATGCCGGAGACGGCGCTA+AGG | 0.585070 | 1.2:+12394543 | MS.gene021399:CDS |
| AACTTGCTACAAGTTATGCT+GGG | 0.587027 | 1.2:+12400192 | MS.gene021399:CDS |
| TTAACATCTTGCATGAAGCA+AGG | 0.589370 | 1.2:+12401392 | MS.gene021399:CDS |
| TATCAGTTCAAATATCATGA+AGG | 0.592690 | 1.2:+12401629 | MS.gene021399:CDS |
| AAATAACATCGCTTCTCGCA+GGG | 0.593349 | 1.2:+12395863 | MS.gene021399:CDS |
| GATTAGGGTTCCGTTGTCGA+CGG | 0.593798 | 1.2:-12394374 | None:intergenic |
| AGCGCCGTCTCCGGCATCGG+AGG | 0.594499 | 1.2:-12394539 | None:intergenic |
| CTCGCAATCTCCTGGTCCCG+CGG | 0.594689 | 1.2:+12394475 | MS.gene021399:CDS |
| TTGCGAGGCGAGAGACTGGA+CGG | 0.595844 | 1.2:-12394459 | None:intergenic |
| GGAACCCTAATCCCATTCTC+CGG | 0.597230 | 1.2:+12394385 | MS.gene021399:CDS |
| ATGATGAGCGTTATAACTTG+GGG | 0.597621 | 1.2:+12400983 | MS.gene021399:CDS |
| TATAGGCCTGGGAGAAATGG+AGG | 0.599849 | 1.2:+12400094 | MS.gene021399:intron |
| CAAACCTCCGATGCCGGAGA+CGG | 0.600136 | 1.2:+12394535 | MS.gene021399:CDS |
| CCGGCATCGGAGGTTTGAGA+GGG | 0.600200 | 1.2:-12394529 | None:intergenic |
| CTGGACGGGTGAGGTTGTGG+TGG | 0.600961 | 1.2:-12394444 | None:intergenic |
| CGCGGGACCAGGAGATTGCG+AGG | 0.602510 | 1.2:-12394474 | None:intergenic |
| GTTAGAAAATGGATTAGTGG+AGG | 0.602718 | 1.2:+12399876 | MS.gene021399:intron |
| TTCAAGAGTTATCTTTGGCG+AGG | 0.603017 | 1.2:+12406298 | MS.gene021399:CDS |
| GTTCATGCTGCAGGTTATCG+AGG | 0.603288 | 1.2:+12399471 | MS.gene021399:intron |
| GGAGTCTATCACTGGAAGCA+TGG | 0.603890 | 1.2:+12401783 | MS.gene021399:CDS |
| CCGTGGAATTGTTAACTGCA+GGG | 0.607527 | 1.2:+12400935 | MS.gene021399:CDS |
| ACATAGAAGAAATCGCACTC+CGG | 0.611098 | 1.2:-12394669 | None:intergenic |
| TGCGAAAAGGGAGACGCGGA+GGG | 0.611385 | 1.2:-12394503 | None:intergenic |
| CTGCGAAAAGGGAGACGCGG+AGG | 0.611997 | 1.2:-12394504 | None:intergenic |
| TGCGAGGCGAGAGACTGGAC+GGG | 0.618389 | 1.2:-12394458 | None:intergenic |
| TCCGTTGTCGACGGTGTTGG+GGG | 0.620804 | 1.2:-12394365 | None:intergenic |
| ACTCACCGAGTCAACCAGAA+GGG | 0.625812 | 1.2:-12404226 | None:intergenic |
| CCCTGCAGTTAACAATTCCA+CGG | 0.627462 | 1.2:-12400935 | None:intergenic |
| TGGACAAACAATCTCAAGCA+TGG | 0.630226 | 1.2:+12396101 | MS.gene021399:CDS |
| TATGATCAAGCTCATATAAG+CGG | 0.630484 | 1.2:-12401608 | None:intergenic |
| AATAGAACTCAGTGCTTGAG+GGG | 0.630771 | 1.2:-12406352 | None:intergenic |
| ATTTGCAGGTGAAAATGTTG+CGG | 0.633777 | 1.2:+12399633 | MS.gene021399:intron |
| AAGGTTATCGAAGTTAAGCT+CGG | 0.635323 | 1.2:+12394562 | MS.gene021399:CDS |
| TGATAATCAACAAACTCGCG+AGG | 0.638932 | 1.2:+12400161 | MS.gene021399:CDS |
| TGATGAGCGTTATAACTTGG+GGG | 0.639014 | 1.2:+12400984 | MS.gene021399:CDS |
| TACTCACCGAGTCAACCAGA+AGG | 0.640440 | 1.2:-12404227 | None:intergenic |
| AACCTATGGGTACCAGTAGG+TGG | 0.640501 | 1.2:-12400480 | None:intergenic |
| AAGTTAGGCTCAGTGAAGTG+CGG | 0.643977 | 1.2:-12406327 | None:intergenic |
| AGGGGCAGCCAAAAGCGCTG+AGG | 0.644717 | 1.2:-12404207 | None:intergenic |
| GCATGTCCTTCAATATAGCA+AGG | 0.645616 | 1.2:+12395840 | MS.gene021399:CDS |
| CTCACCGAGTCAACCAGAAG+GGG | 0.648465 | 1.2:-12404225 | None:intergenic |
| GCAGATTCAGGACGTAATCG+AGG | 0.649804 | 1.2:-12399925 | None:intergenic |
| TCTATTCATCAAGTATAGCA+CGG | 0.650831 | 1.2:-12406401 | None:intergenic |
| GATGAGCGTTATAACTTGGG+GGG | 0.652204 | 1.2:+12400985 | MS.gene021399:CDS |
| ATGCTTCCAGTGATAGACTC+CGG | 0.653805 | 1.2:-12401781 | None:intergenic |
| TCCCTTCAGATGGTATACAG+TGG | 0.657444 | 1.2:+12402241 | MS.gene021399:CDS |
| GTCAACCTATGGGTACCAGT+AGG | 0.678788 | 1.2:-12400483 | None:intergenic |
| ATAGAACTCAGTGCTTGAGG+GGG | 0.685115 | 1.2:-12406351 | None:intergenic |
| TCTGAATCTAAGCCTGCTGG+AGG | 0.694325 | 1.2:+12402081 | MS.gene021399:CDS |
| GATAATCAACAAACTCGCGA+GGG | 0.694963 | 1.2:+12400162 | MS.gene021399:CDS |
| AACCACCTACTGGTACCCAT+AGG | 0.703412 | 1.2:+12400478 | MS.gene021399:CDS |
| GGGCAGCCAAAAGCGCTGAG+GGG | 0.710143 | 1.2:-12404205 | None:intergenic |
| AGACCAGCTCAGCAACCGTG+AGG | 0.718063 | 1.2:+12399676 | MS.gene021399:CDS |
| GTTCTGCGAAAAGGGAGACG+CGG | 0.721849 | 1.2:-12394507 | None:intergenic |
| GTTATCGAAGTTAAGCTCGG+AGG | 0.743966 | 1.2:+12394565 | MS.gene021399:CDS |
| AATTCTTGGAGAAAATACGG+AGG | 0.749443 | 1.2:+12400521 | MS.gene021399:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 12394361 | 12406422 | 12394361 | ID=MS.gene021399 |
| chr1.2 | mRNA | 12394361 | 12406422 | 12394361 | ID=MS.gene021399.t1;Parent=MS.gene021399 |
| chr1.2 | exon | 12394361 | 12394722 | 12394361 | ID=MS.gene021399.t1.exon1;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12394361 | 12394722 | 12394361 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12395834 | 12395936 | 12395834 | ID=MS.gene021399.t1.exon2;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12395834 | 12395936 | 12395834 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12396043 | 12396153 | 12396043 | ID=MS.gene021399.t1.exon3;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12396043 | 12396153 | 12396043 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12396253 | 12396336 | 12396253 | ID=MS.gene021399.t1.exon4;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12396253 | 12396336 | 12396253 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12399484 | 12399555 | 12399484 | ID=MS.gene021399.t1.exon5;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12399484 | 12399555 | 12399484 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12399641 | 12399697 | 12399641 | ID=MS.gene021399.t1.exon6;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12399641 | 12399697 | 12399641 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12399877 | 12399996 | 12399877 | ID=MS.gene021399.t1.exon7;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12399877 | 12399996 | 12399877 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12400099 | 12400299 | 12400099 | ID=MS.gene021399.t1.exon8;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12400099 | 12400299 | 12400099 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12400432 | 12400542 | 12400432 | ID=MS.gene021399.t1.exon9;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12400432 | 12400542 | 12400432 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12400650 | 12400687 | 12400650 | ID=MS.gene021399.t1.exon10;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12400650 | 12400687 | 12400650 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12400921 | 12401077 | 12400921 | ID=MS.gene021399.t1.exon11;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12400921 | 12401077 | 12400921 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12401377 | 12401478 | 12401377 | ID=MS.gene021399.t1.exon12;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12401377 | 12401478 | 12401377 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12401594 | 12401650 | 12401594 | ID=MS.gene021399.t1.exon13;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12401594 | 12401650 | 12401594 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12401777 | 12401923 | 12401777 | ID=MS.gene021399.t1.exon14;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12401777 | 12401923 | 12401777 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12402051 | 12402121 | 12402051 | ID=MS.gene021399.t1.exon15;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12402051 | 12402121 | 12402051 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12402222 | 12402309 | 12402222 | ID=MS.gene021399.t1.exon16;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12402222 | 12402309 | 12402222 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12404186 | 12404242 | 12404186 | ID=MS.gene021399.t1.exon17;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12404186 | 12404242 | 12404186 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| chr1.2 | exon | 12406228 | 12406422 | 12406228 | ID=MS.gene021399.t1.exon18;Parent=MS.gene021399.t1 |
| chr1.2 | CDS | 12406228 | 12406422 | 12406228 | ID=cds.MS.gene021399.t1;Parent=MS.gene021399.t1 |
| Gene Sequence |
| Protein sequence |
