AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022051

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022051.t1 MTR_7g018240 94.427 628 35 0 1 628 1 628 0.0 1221
MS.gene022051.t1 MTR_4g104830 30.565 602 398 6 33 628 50 637 3.29e-93 300
MS.gene022051.t1 MTR_4g104800 31.136 546 369 3 87 628 95 637 4.27e-91 295
MS.gene022051.t1 MTR_4g104790 32.472 542 358 4 87 623 90 628 1.28e-89 291
MS.gene022051.t1 MTR_4g104790 23.789 454 284 13 189 594 59 498 2.45e-14 76.6
MS.gene022051.t1 MTR_7g018270 40.208 480 184 15 1 475 1 382 6.69e-79 255
MS.gene022051.t1 MTR_5g092040 27.851 456 250 10 167 602 104 500 6.29e-43 162
MS.gene022051.t1 MTR_4g104860 32.323 198 134 0 229 426 1 198 2.12e-31 122
MS.gene022051.t1 MTR_0252s0060 25.823 395 220 7 219 561 42 415 1.25e-30 125
MS.gene022051.t1 MTR_1g055295 21.090 422 324 7 186 602 623 1040 1.21e-22 103
MS.gene022051.t1 MTR_5g095130 22.706 436 313 10 189 614 67 488 5.36e-20 95.1
MS.gene022051.t1 MTR_5g095130 19.780 546 304 11 76 586 86 532 4.72e-11 66.6
MS.gene022051.t1 MTR_1g108270 23.585 424 281 10 195 581 62 479 3.37e-17 85.5
MS.gene022051.t1 MTR_3g100600 21.282 390 256 8 220 599 94 442 3.67e-17 85.5
MS.gene022051.t1 MTR_4g108650 24.650 357 251 9 237 584 268 615 4.37e-17 85.9
MS.gene022051.t1 MTR_4g068360 24.416 385 243 12 238 581 235 612 4.69e-17 85.5
MS.gene022051.t1 MTR_3g115270 21.694 484 325 15 121 590 172 615 2.88e-16 82.8
MS.gene022051.t1 MTR_7g103600 23.349 424 251 12 238 593 137 554 3.43e-16 82.8
MS.gene022051.t1 MTR_1g080110 22.396 384 281 7 238 610 130 507 1.00e-15 80.9
MS.gene022051.t1 MTR_1g080110 22.409 357 226 11 287 598 73 423 2.10e-12 70.5
MS.gene022051.t1 MTR_1g080110 21.327 422 306 8 125 531 148 558 3.39e-12 69.7
MS.gene022051.t1 MTR_1g068960 23.056 360 267 8 242 596 118 472 1.90e-14 77.4
MS.gene022051.t1 MTR_2g018550 23.011 352 262 7 237 585 390 735 4.82e-14 75.9
MS.gene022051.t1 MTR_3g105900 22.507 351 255 7 266 609 353 693 1.11e-13 75.1
MS.gene022051.t1 MTR_3g105900 21.939 392 247 9 210 582 784 1135 4.81e-11 66.6
MS.gene022051.t1 MTR_7g007400 26.582 237 168 4 363 594 144 379 1.40e-13 74.3
MS.gene022051.t1 MTR_7g007400 24.885 217 153 4 408 615 225 440 4.15e-11 66.2
MS.gene022051.t1 MTR_8g105170 21.705 387 285 10 242 619 334 711 3.20e-13 73.6
MS.gene022051.t1 MTR_7g405940 26.457 223 159 3 376 594 176 397 3.81e-13 72.8
MS.gene022051.t1 MTR_7g405940 25.806 217 151 5 408 615 243 458 2.50e-11 67.0
MS.gene022051.t1 MTR_3g088505 22.788 452 293 10 87 528 61 466 5.03e-13 72.0
MS.gene022051.t1 MTR_8g054410 20.958 501 358 11 59 535 71 557 1.63e-12 70.9
MS.gene022051.t1 MTR_8g071300 22.059 408 301 10 198 596 89 488 2.21e-12 70.5
MS.gene022051.t1 MTR_2g069680 23.828 256 189 4 339 590 79 332 2.71e-12 70.1
MS.gene022051.t1 MTR_6g445320 22.802 364 243 8 235 566 177 534 3.96e-12 69.3
MS.gene022051.t1 MTR_2g049740 24.291 247 180 5 349 590 282 526 4.25e-12 69.7
MS.gene022051.t1 MTR_2g102210 21.495 428 309 14 181 594 50 464 4.42e-12 69.7
MS.gene022051.t1 MTR_0308s0020 21.096 365 277 7 235 594 174 532 7.87e-12 68.6
MS.gene022051.t1 MTR_7g067460 22.961 331 198 8 276 595 114 398 1.34e-11 68.2
MS.gene022051.t1 MTR_0014s0180 25.389 193 130 6 408 592 281 467 1.39e-11 67.8
MS.gene022051.t1 MTR_1g095880 20.126 636 434 25 15 596 122 737 2.16e-11 67.4
MS.gene022051.t1 MTR_6g077800 23.016 252 184 6 345 592 143 388 2.29e-11 67.0
MS.gene022051.t1 MTR_7g011500 21.824 307 206 6 232 538 447 719 2.34e-11 67.4
MS.gene022051.t1 MTR_1g033960 27.807 187 129 4 408 590 274 458 5.97e-11 66.2
MS.gene022051.t1 MTR_2g035450 24.000 275 185 9 323 585 172 434 6.04e-11 65.9
MS.gene022051.t1 MTR_5g090210 24.084 191 135 5 412 596 497 683 6.38e-11 65.9
MS.gene022051.t1 MTR_7g044790 21.027 409 266 16 195 591 61 424 7.60e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022051.t1 AT5G15980 45.345 666 322 6 3 628 4 667 0.0 577
MS.gene022051.t1 AT3G02490 46.596 661 317 9 1 627 1 659 0.0 573
MS.gene022051.t1 AT3G48250 30.885 599 392 6 20 611 34 617 2.44e-85 279
MS.gene022051.t1 AT3G06920 21.940 433 316 9 191 614 48 467 2.44e-18 90.1
MS.gene022051.t1 AT3G06920 21.940 433 316 9 191 614 48 467 2.44e-18 90.1
MS.gene022051.t1 AT3G06920 21.940 433 316 9 191 614 34 453 3.39e-18 89.4
MS.gene022051.t1 AT5G01110 22.293 471 292 13 125 538 272 725 1.84e-17 87.0
MS.gene022051.t1 AT5G01110 20.812 591 384 18 78 596 67 645 4.98e-11 66.2
MS.gene022051.t1 AT5G01110 22.293 471 292 13 125 538 300 753 1.95e-17 87.0
MS.gene022051.t1 AT5G01110 20.812 591 384 18 78 596 95 673 6.31e-11 66.2
MS.gene022051.t1 AT5G42310 22.222 486 324 15 119 590 193 638 1.24e-16 84.3
MS.gene022051.t1 AT1G05670 22.081 471 296 11 125 591 283 686 2.06e-16 83.6
MS.gene022051.t1 AT1G05670 22.081 471 296 11 125 591 283 686 2.06e-16 83.6
MS.gene022051.t1 AT1G05670 22.081 471 296 11 125 591 283 686 2.06e-16 83.6
MS.gene022051.t1 AT2G37230 23.892 406 256 14 180 575 72 434 1.89e-15 80.5
MS.gene022051.t1 AT3G48810 22.406 424 270 12 212 594 40 445 2.58e-15 80.1
MS.gene022051.t1 AT5G06400 21.957 419 308 8 193 601 615 1024 8.61e-15 78.6
MS.gene022051.t1 AT5G06400 21.859 398 253 12 209 595 142 492 6.88e-11 66.2
MS.gene022051.t1 AT5G65560 22.985 335 247 6 233 563 336 663 9.03e-15 78.6
MS.gene022051.t1 AT5G65560 24.384 406 220 9 229 596 96 452 1.05e-14 78.2
MS.gene022051.t1 AT5G65560 22.985 335 247 6 233 563 336 663 9.03e-15 78.6
MS.gene022051.t1 AT5G65560 24.384 406 220 9 229 596 96 452 1.05e-14 78.2
MS.gene022051.t1 AT5G65560 22.985 335 247 6 233 563 336 663 9.03e-15 78.6
MS.gene022051.t1 AT5G65560 24.384 406 220 9 229 596 96 452 1.05e-14 78.2
MS.gene022051.t1 AT5G18390 23.892 406 252 13 199 594 57 415 2.50e-14 76.3
MS.gene022051.t1 AT3G53700 24.112 394 252 13 219 587 45 416 2.52e-14 77.0
MS.gene022051.t1 AT3G53700 21.266 395 260 12 209 594 246 598 6.98e-12 68.9
MS.gene022051.t1 AT5G43820 22.673 419 276 11 209 586 104 515 9.39e-14 74.7
MS.gene022051.t1 AT3G07290 26.761 213 151 3 387 595 184 395 1.84e-13 74.3
MS.gene022051.t1 AT5G64320 21.411 397 265 9 242 598 97 486 2.16e-13 73.9
MS.gene022051.t1 AT5G64320 19.386 521 350 13 96 596 84 554 1.89e-12 70.9
MS.gene022051.t1 AT5G64320 22.419 339 245 6 255 584 388 717 2.06e-12 70.9
MS.gene022051.t1 AT3G16710 22.841 359 230 9 279 596 141 493 2.16e-13 73.6
MS.gene022051.t1 AT1G31840 22.917 576 360 19 87 595 67 625 6.73e-13 72.4
MS.gene022051.t1 AT1G79540 20.058 344 264 7 259 596 95 433 7.17e-13 72.4
MS.gene022051.t1 AT3G04760 24.868 189 136 4 412 596 242 428 7.19e-13 72.0
MS.gene022051.t1 AT3G04760 24.868 189 136 4 412 596 212 398 7.74e-13 72.0
MS.gene022051.t1 AT3G04760 22.432 370 264 11 238 594 142 501 2.05e-11 67.4
MS.gene022051.t1 AT5G59900 22.093 344 256 6 259 596 230 567 2.14e-12 70.9
MS.gene022051.t1 AT2G17140 23.699 346 240 8 259 596 220 549 3.24e-12 70.5
MS.gene022051.t1 AT2G17140 23.699 346 240 8 259 596 220 549 3.24e-12 70.5
MS.gene022051.t1 AT4G28010 26.064 188 133 4 411 594 225 410 3.72e-12 70.1
MS.gene022051.t1 AT4G20090 22.126 348 246 11 258 590 114 451 6.53e-12 68.9
MS.gene022051.t1 AT4G20090 22.126 348 246 11 258 590 114 451 6.53e-12 68.9
MS.gene022051.t1 AT1G80550 22.081 394 268 14 221 593 43 418 8.60e-12 68.2
MS.gene022051.t1 AT3G22470 21.579 380 254 10 214 553 200 575 1.53e-11 67.8
MS.gene022051.t1 AT4G31850 20.786 611 378 16 85 604 81 676 1.88e-11 67.8
MS.gene022051.t1 AT3G16010 20.404 446 298 11 198 596 69 504 3.78e-11 66.6
MS.gene022051.t1 AT1G12775 20.060 334 255 6 259 586 91 418 5.49e-11 66.2

Find 156 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATACAAGATTCTTTGTAAA+TGG 0.146220 7.1:+78590762 MS.gene022051:CDS
CACAGATGCCTTAAATCTTT+TGG 0.157867 7.1:+78590862 MS.gene022051:CDS
CATCAGACCCAAAAGATTTA+AGG 0.165184 7.1:-78590870 None:intergenic
ATTAGGGTTTACAAGGAATT+TGG 0.168750 7.1:-78589418 None:intergenic
GAAGAGAAATGACGGAAATT+AGG 0.170623 7.1:-78589435 None:intergenic
GGTTGTTGTTATGAGGAAAA+AGG 0.241522 7.1:+78589734 MS.gene022051:CDS
GGAGAAGGAGATTAGGGATT+TGG 0.248189 7.1:+78589926 MS.gene022051:CDS
AGGATTCGATTGATCGGTTT+TGG 0.265879 7.1:+78590105 MS.gene022051:CDS
AGCAGCTTCTTTAGTGTTCA+TGG 0.267739 7.1:-78591137 None:intergenic
TTGTAAGAGGAGAATGATTA+AGG 0.270276 7.1:+78590202 MS.gene022051:CDS
GTTAACTTCATTAAGATCTA+TGG 0.272479 7.1:-78589520 None:intergenic
TAGGATTGGGGAGTGGAATA+AGG 0.273285 7.1:+78590430 MS.gene022051:CDS
TTTAAGTTCGGAGCCGAATA+AGG 0.279585 7.1:+78589992 MS.gene022051:CDS
ATGGAGCTGTTGATGAGTTT+TGG 0.283616 7.1:+78589706 MS.gene022051:CDS
ACATTCTACTTACAAGCTTT+TGG 0.283842 7.1:+78590811 MS.gene022051:CDS
ATGAAGTGGAGAAGGAGATT+AGG 0.301581 7.1:+78589919 MS.gene022051:CDS
TGAAGTGGAGAAGGAGATTA+GGG 0.315712 7.1:+78589920 MS.gene022051:CDS
CATCTTTCGCTCTATTCATT+TGG 0.322819 7.1:-78590739 None:intergenic
CTGGGCGTGTTGGGAATTAA+TGG 0.328525 7.1:+78589687 MS.gene022051:CDS
TAACAAGTGTTGGTAGGATT+GGG 0.329489 7.1:+78590417 MS.gene022051:CDS
AAAGAAGCTGCTGCTTCTTC+TGG 0.331132 7.1:+78591148 MS.gene022051:CDS
GAATGCTTTGACAGATTCTA+TGG 0.331165 7.1:+78590373 MS.gene022051:CDS
TACAAGGAATTTGGAGTGAT+TGG 0.331289 7.1:-78589409 None:intergenic
TGAATCGGTTAAGTTGGTTT+TGG 0.333930 7.1:+78589965 MS.gene022051:CDS
GTGTGATCGGGATTGGGTTG+TGG 0.335834 7.1:-78589471 None:intergenic
GAGATTAGGGATTTGGATGT+TGG 0.337035 7.1:+78589933 MS.gene022051:CDS
AAGAGAAATGACGGAAATTA+GGG 0.352828 7.1:-78589434 None:intergenic
ATTAGCTTGTTCCTTGTTAC+CGG 0.360483 7.1:-78590531 None:intergenic
TCGATGAAGGGTTCGGTAAA+AGG 0.366574 7.1:-78590911 None:intergenic
GGATTGGGTTGTGGGATAAC+TGG 0.367830 7.1:-78589462 None:intergenic
CTGCGCGGAGATTGTTCAAA+TGG 0.373427 7.1:+78589613 MS.gene022051:CDS
GTGGATAGAATTGAAGCATA+TGG 0.376496 7.1:+78590560 MS.gene022051:CDS
TGTGATCGGGATTGGGTTGT+GGG 0.380700 7.1:-78589470 None:intergenic
AACCAGATGCTGGGCGTGTT+GGG 0.383780 7.1:+78589678 MS.gene022051:CDS
CTTTGATATGTGTTCGATGA+AGG 0.400920 7.1:-78590924 None:intergenic
TTAACAAGTGTTGGTAGGAT+TGG 0.407364 7.1:+78590416 MS.gene022051:CDS
GGTAACTAAGTTATTGGCTC+AGG 0.407386 7.1:+78590832 MS.gene022051:CDS
TGTCAAAGCATTCCCGTTCC+CGG 0.414639 7.1:-78590363 None:intergenic
GATGACGGTGTGATCGGGAT+TGG 0.415960 7.1:-78589478 None:intergenic
TTCCCAACACGCCCAGCATC+TGG 0.418671 7.1:-78589680 None:intergenic
CAAAGAGATGGTTGAGAAAG+AGG 0.418705 7.1:+78590667 MS.gene022051:CDS
AGATTAGGGATTTGGATGTT+GGG 0.422745 7.1:+78589934 MS.gene022051:CDS
CGGTAAAAGGAGGGAAACCT+TGG 0.426143 7.1:-78590898 None:intergenic
GGAAGGTTGTTGGTGATATG+AGG 0.427153 7.1:+78590126 MS.gene022051:CDS
GGGATTTGGTTGTTGTTATG+AGG 0.428330 7.1:+78589727 MS.gene022051:CDS
GCGAAGTGTGTGAGAATGAT+TGG 0.435524 7.1:-78589355 None:intergenic
TCAACGATGACGGTGTGATC+GGG 0.439201 7.1:-78589483 None:intergenic
TTTAGGTGGGTTGAGGAGAG+TGG 0.441403 7.1:+78590026 MS.gene022051:CDS
ATACAAGATTCTTTGTAAAT+GGG 0.443889 7.1:+78590763 MS.gene022051:CDS
AATGCGGTTGCGAGGGTGCT+TGG 0.445827 7.1:+78590077 MS.gene022051:CDS
ATCAACGATGACGGTGTGAT+CGG 0.450394 7.1:-78589484 None:intergenic
TGAAGGAAATAGAAGATTGT+GGG 0.451522 7.1:+78590456 MS.gene022051:CDS
GCATTTCGACTCGGCGCTAC+CGG 0.451956 7.1:+78590512 MS.gene022051:CDS
ATGACGGTGTGATCGGGATT+GGG 0.453250 7.1:-78589477 None:intergenic
AAAGAGATGGTTGAGAAAGA+GGG 0.454837 7.1:+78590668 MS.gene022051:CDS
CTTCGATTCTTTCAAAGAGA+TGG 0.459459 7.1:+78590655 MS.gene022051:CDS
CTTTACCTTTCTGTTGAGAA+AGG 0.468889 7.1:+78590283 MS.gene022051:CDS
TTGAAGGAAATAGAAGATTG+TGG 0.471311 7.1:+78590455 MS.gene022051:CDS
CGGTTGCGAGGGTGCTTGGA+AGG 0.474105 7.1:+78590081 MS.gene022051:CDS
ACATGGTACACAGATGTAGA+TGG 0.474522 7.1:-78591004 None:intergenic
CGAAGTGTGTGAGAATGATT+GGG 0.476423 7.1:-78589354 None:intergenic
GTTGAAGGAGTTGTTTGGTA+AGG 0.478874 7.1:+78589836 MS.gene022051:CDS
TTCGAGTGAATCGGTTAAGT+TGG 0.481102 7.1:+78589959 MS.gene022051:CDS
TTTGAAAAGGGTGGAATGAA+TGG 0.482821 7.1:+78589801 MS.gene022051:CDS
GAGAAAGGTTGTTTCTGCTA+AGG 0.484200 7.1:+78590298 MS.gene022051:CDS
GTTGAGGGGCATTGTGTAGG+TGG 0.485045 7.1:+78590617 MS.gene022051:CDS
AGTGGATTGTTTAAGCATGA+TGG 0.485938 7.1:+78590044 MS.gene022051:CDS
TGCGAGGGTGCTTGGAAGGG+AGG 0.488293 7.1:+78590085 MS.gene022051:CDS
TGGATAGAATTGAAGCATAT+GGG 0.488664 7.1:+78590561 MS.gene022051:CDS
TAACCAGATGCTGGGCGTGT+TGG 0.489405 7.1:+78589677 MS.gene022051:CDS
AAGGTAAAGCACGGCGGCGT+AGG 0.490324 7.1:-78590269 None:intergenic
GGGTTGTGGGATAACTGGTT+CGG 0.494568 7.1:-78589457 None:intergenic
CACATATCAAAGCGTGGAAG+TGG 0.495823 7.1:+78590935 MS.gene022051:CDS
AGCTGCTGCTTCTTCTGGTA+TGG 0.495928 7.1:+78591153 MS.gene022051:CDS
CTGAAATCTTTAACAAGTGT+TGG 0.496864 7.1:+78590407 MS.gene022051:CDS
GGAACAAGCTAATGAGTTTG+TGG 0.497718 7.1:+78590541 MS.gene022051:CDS
CAACAACAATGAGGAATCAA+TGG 0.500901 7.1:+78589292 None:intergenic
AATCTTTAACAAGTGTTGGT+AGG 0.503703 7.1:+78590411 MS.gene022051:CDS
TTGTTGCTAGCGGTGGTTTG+AGG 0.505289 7.1:+78590480 MS.gene022051:CDS
TCGTGACGACGCTGACGTCT+TGG 0.506729 7.1:+78591102 MS.gene022051:CDS
GACGGAAATTAGGGTTTACA+AGG 0.507124 7.1:-78589425 None:intergenic
TGGTGGATTTGAGATGGAAG+AGG 0.507469 7.1:+78590151 MS.gene022051:CDS
TTCTTCAAGCAAGGAAGGCA+TGG 0.509797 7.1:+78591040 MS.gene022051:CDS
GTGAAGTTGAAGGAGTTGTT+TGG 0.510969 7.1:+78589831 MS.gene022051:CDS
GGAAATTGACTAGTTTGTGT+AGG 0.512507 7.1:+78589871 MS.gene022051:CDS
TTATACGAGTTTGCTATGGC+TGG 0.512546 7.1:+78590236 MS.gene022051:CDS
AAGAATCGAAGGCCTTATCA+AGG 0.514605 7.1:-78590643 None:intergenic
TTAGTTGAGGGGCATTGTGT+AGG 0.521164 7.1:+78590614 MS.gene022051:CDS
TAGTACAGACCGCAAGATGC+GGG 0.522838 7.1:+78590586 MS.gene022051:CDS
GAAATCGTATAACCAGATGC+TGG 0.523628 7.1:+78589668 MS.gene022051:CDS
TGCGCGGAGATTGTTCAAAT+GGG 0.527437 7.1:+78589614 MS.gene022051:CDS
TTTGATATGTGTTCGATGAA+GGG 0.527446 7.1:-78590923 None:intergenic
CGTAAAATTGCATTTCGACT+CGG 0.528963 7.1:+78590503 MS.gene022051:CDS
TGTAGATGGAAACTTCTTTG+AGG 0.529047 7.1:-78590990 None:intergenic
TGATTTATACGAGTTTGCTA+TGG 0.530740 7.1:+78590232 MS.gene022051:CDS
GAGGAGTGGTGGATTTGAGA+TGG 0.538154 7.1:+78590145 MS.gene022051:CDS
GTGCATTCTTCAAGCAAGGA+AGG 0.539033 7.1:+78591035 MS.gene022051:CDS
GTAACTAAGTTATTGGCTCA+GGG 0.540353 7.1:+78590833 MS.gene022051:CDS
GGTTGCGAGGGTGCTTGGAA+GGG 0.540782 7.1:+78590082 MS.gene022051:CDS
CATCGTGATTGATCAAATCA+AGG 0.542516 7.1:-78589548 None:intergenic
TGTAGGTGGGAACCTTGATA+AGG 0.555152 7.1:+78590631 MS.gene022051:CDS
AACAAGTGTTGGTAGGATTG+GGG 0.555476 7.1:+78590418 MS.gene022051:CDS
GTTGGTGATATGAGGAGTGG+TGG 0.561154 7.1:+78590134 MS.gene022051:CDS
CTAAAGATTCCCGCATCTTG+CGG 0.562507 7.1:-78590595 None:intergenic
AAAGAGGGAGTTGCATCTGC+GGG 0.562684 7.1:+78590683 MS.gene022051:CDS
GGATTGTTTAAGCATGATGG+AGG 0.562715 7.1:+78590047 MS.gene022051:CDS
TTTAGTGCATTCTTCAAGCA+AGG 0.564647 7.1:+78591031 MS.gene022051:CDS
CATCTCTTTGAAAGAATCGA+AGG 0.566348 7.1:-78590654 None:intergenic
GTGGAGTGATGAAGTGGAGA+AGG 0.567586 7.1:+78589911 MS.gene022051:CDS
TATGTGTTCGATGAAGGGTT+CGG 0.567930 7.1:-78590918 None:intergenic
TTGGGTCTGATGAGAACCCA+AGG 0.568606 7.1:+78590881 MS.gene022051:CDS
TGGTGATGCTGTGAAGTTGA+AGG 0.572110 7.1:+78589821 MS.gene022051:CDS
ATGGGTGAAAGATAGAATGT+TGG 0.573024 7.1:+78589773 MS.gene022051:CDS
ATGCGGGAATCTTTAGTTGA+GGG 0.573059 7.1:+78590602 MS.gene022051:CDS
TGCTGCTTCTTCTGGTATGG+TGG 0.573328 7.1:+78591156 MS.gene022051:CDS
GCGTCGTCACGAATGAAGCT+TGG 0.574398 7.1:-78591091 None:intergenic
TTGAGGGGCATTGTGTAGGT+GGG 0.574625 7.1:+78590618 MS.gene022051:CDS
CTAGTTTGTGTAGGATTGTG+AGG 0.577352 7.1:+78589880 MS.gene022051:CDS
AGAATGCACTAAACATTACA+TGG 0.580623 7.1:-78591021 None:intergenic
AAATCGTATAACCAGATGCT+GGG 0.581418 7.1:+78589669 MS.gene022051:CDS
GAAGGGAGGATTCGATTGAT+CGG 0.581607 7.1:+78590099 MS.gene022051:CDS
GGAGTTATAATGCGGTTGCG+AGG 0.582748 7.1:+78590069 MS.gene022051:CDS
GAGTTATAATGCGGTTGCGA+GGG 0.583362 7.1:+78590070 MS.gene022051:CDS
GAGATTGTTCAAATGGGTAT+CGG 0.584914 7.1:+78589620 MS.gene022051:CDS
AACAACCTTTCTCAACAGAA+AGG 0.586004 7.1:-78590288 None:intergenic
CTAGTACAGACCGCAAGATG+CGG 0.589855 7.1:+78590585 MS.gene022051:CDS
GATGCGGGAATCTTTAGTTG+AGG 0.591256 7.1:+78590601 MS.gene022051:CDS
CTGGTTCGGAAGAGAAATGA+CGG 0.592985 7.1:-78589443 None:intergenic
GGTAAAAGGAGGGAAACCTT+GGG 0.593350 7.1:-78590897 None:intergenic
TGCGGGAATCTTTAGTTGAG+GGG 0.594591 7.1:+78590603 MS.gene022051:CDS
GTGTTGGTAGGATTGGGGAG+TGG 0.596778 7.1:+78590423 MS.gene022051:CDS
GTGATTGGTGTTGAAACGAA+GGG 0.602586 7.1:-78589394 None:intergenic
CTCAACAGAAAGGTAAAGCA+CGG 0.604526 7.1:-78590278 None:intergenic
ACTCGGCGCTACCGGTAACA+AGG 0.605173 7.1:+78590520 MS.gene022051:CDS
GATTGGTGTTGAAACGAAGG+GGG 0.607252 7.1:-78589392 None:intergenic
AAATGTGTGGAGTGATGAAG+TGG 0.611765 7.1:+78589905 MS.gene022051:CDS
AGTGATTGGTGTTGAAACGA+AGG 0.611958 7.1:-78589395 None:intergenic
GATTGTGGGTTTGTTGCTAG+CGG 0.615030 7.1:+78590470 MS.gene022051:CDS
ATGAAGGGTTCGGTAAAAGG+AGG 0.622798 7.1:-78590908 None:intergenic
GAAAGAGGGAGTTGCATCTG+CGG 0.623256 7.1:+78590682 MS.gene022051:CDS
TGTGGGTTTGTTGCTAGCGG+TGG 0.625962 7.1:+78590473 MS.gene022051:CDS
TTGGTAAGGATACAGTTGAG+AGG 0.628865 7.1:+78589850 MS.gene022051:CDS
TGACGCCGTTCTGTTACTCA+AGG 0.629560 7.1:+78590961 MS.gene022051:CDS
TGATTGGTGTTGAAACGAAG+GGG 0.631493 7.1:-78589393 None:intergenic
CGAGAATAAATCAACGATGA+CGG 0.632836 7.1:-78589493 None:intergenic
TGAAGGGTTCGGTAAAAGGA+GGG 0.647534 7.1:-78590907 None:intergenic
GATTGTTTAAGCATGATGGA+GGG 0.656081 7.1:+78590048 MS.gene022051:CDS
CATTGCCTTGAGTAACAGAA+CGG 0.657067 7.1:-78590966 None:intergenic
ATCGAACACATATCAAAGCG+TGG 0.664150 7.1:+78590929 MS.gene022051:CDS
GTTGTTGGTGATATGAGGAG+TGG 0.695892 7.1:+78590131 MS.gene022051:CDS
ACTAAGTTATTGGCTCAGGG+AGG 0.704121 7.1:+78590836 MS.gene022051:CDS
ATTCTGATCTTGATTCTGCG+CGG 0.712748 7.1:+78589598 MS.gene022051:CDS
TGATGGAGGGAGTTATAATG+CGG 0.713062 7.1:+78590061 MS.gene022051:CDS
GAAGTGTGTGAGAATGATTG+GGG 0.723948 7.1:-78589353 None:intergenic
AGCTTGTAAGTAGAATGTCG+AGG 0.728230 7.1:-78590806 None:intergenic
AACAGAAAGGTAAAGCACGG+CGG 0.776115 7.1:-78590275 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACAAGATTCTTTGTAAAT+GGG + chr7.1:78590763-78590782 MS.gene022051:CDS 20.0%
! CATACAAGATTCTTTGTAAA+TGG + chr7.1:78590762-78590781 MS.gene022051:CDS 25.0%
! GTTAACTTCATTAAGATCTA+TGG - chr7.1:78589523-78589542 None:intergenic 25.0%
!! AAAAATATCAACGCCTTATT+CGG - chr7.1:78590008-78590027 None:intergenic 25.0%
!!! AATGTTGGAGTATTTTGAAA+AGG + chr7.1:78589788-78589807 MS.gene022051:CDS 25.0%
!!! AGATATGAATTTGTTTTCGA+GGG + chr7.1:78590325-78590344 MS.gene022051:CDS 25.0%
!!! ATAAGGCGTTGATATTTTTT+AGG + chr7.1:78590009-78590028 MS.gene022051:CDS 25.0%
!!! ATGTTGGAGTATTTTGAAAA+GGG + chr7.1:78589789-78589808 MS.gene022051:CDS 25.0%
!!! TAGATATGAATTTGTTTTCG+AGG + chr7.1:78590324-78590343 MS.gene022051:CDS 25.0%
AGAATGCACTAAACATTACA+TGG - chr7.1:78591024-78591043 None:intergenic 30.0%
ATTAGGGTTTACAAGGAATT+TGG - chr7.1:78589421-78589440 None:intergenic 30.0%
CTGAAATCTTTAACAAGTGT+TGG + chr7.1:78590407-78590426 MS.gene022051:CDS 30.0%
TGAAGGAAATAGAAGATTGT+GGG + chr7.1:78590456-78590475 MS.gene022051:CDS 30.0%
TGGATAGAATTGAAGCATAT+GGG + chr7.1:78590561-78590580 MS.gene022051:CDS 30.0%
TTGAAGGAAATAGAAGATTG+TGG + chr7.1:78590455-78590474 MS.gene022051:CDS 30.0%
TTGTAAGAGGAGAATGATTA+AGG + chr7.1:78590202-78590221 MS.gene022051:CDS 30.0%
TTTGATATGTGTTCGATGAA+GGG - chr7.1:78590926-78590945 None:intergenic 30.0%
! AAGAGAAATGACGGAAATTA+GGG - chr7.1:78589437-78589456 None:intergenic 30.0%
! ACAGATGCCTTAAATCTTTT+GGG + chr7.1:78590863-78590882 MS.gene022051:CDS 30.0%
! ACATTCTACTTACAAGCTTT+TGG + chr7.1:78590811-78590830 MS.gene022051:CDS 30.0%
! GAGACTTTTGTTAAGGTTTT+GGG + chr7.1:78590173-78590192 MS.gene022051:CDS 30.0%
! GTTGTTGTTATGAGGAAAAA+GGG + chr7.1:78589735-78589754 MS.gene022051:CDS 30.0%
!! AATCTTTAACAAGTGTTGGT+AGG + chr7.1:78590411-78590430 MS.gene022051:CDS 30.0%
!! GCTTTTGGTAACTAAGTTAT+TGG + chr7.1:78590826-78590845 MS.gene022051:CDS 30.0%
!! TGATTTATACGAGTTTGCTA+TGG + chr7.1:78590232-78590251 MS.gene022051:CDS 30.0%
AAAGAGATGGTTGAGAAAGA+GGG + chr7.1:78590668-78590687 MS.gene022051:CDS 35.0%
AAATCGTATAACCAGATGCT+GGG + chr7.1:78589669-78589688 MS.gene022051:CDS 35.0%
AACAACCTTTCTCAACAGAA+AGG - chr7.1:78590291-78590310 None:intergenic 35.0%
AGATTAGGGATTTGGATGTT+GGG + chr7.1:78589934-78589953 MS.gene022051:CDS 35.0%
ATGGGTGAAAGATAGAATGT+TGG + chr7.1:78589773-78589792 MS.gene022051:CDS 35.0%
CATCAGACCCAAAAGATTTA+AGG - chr7.1:78590873-78590892 None:intergenic 35.0%
CATCGTGATTGATCAAATCA+AGG - chr7.1:78589551-78589570 None:intergenic 35.0%
CATCTTTCGCTCTATTCATT+TGG - chr7.1:78590742-78590761 None:intergenic 35.0%
CGAGAATAAATCAACGATGA+CGG - chr7.1:78589496-78589515 None:intergenic 35.0%
CGTAAAATTGCATTTCGACT+CGG + chr7.1:78590503-78590522 MS.gene022051:CDS 35.0%
CTTCGATTCTTTCAAAGAGA+TGG + chr7.1:78590655-78590674 MS.gene022051:CDS 35.0%
CTTTACCTTTCTGTTGAGAA+AGG + chr7.1:78590283-78590302 MS.gene022051:CDS 35.0%
CTTTGATATGTGTTCGATGA+AGG - chr7.1:78590927-78590946 None:intergenic 35.0%
GAATGCTTTGACAGATTCTA+TGG + chr7.1:78590373-78590392 MS.gene022051:CDS 35.0%
GAGATTGTTCAAATGGGTAT+CGG + chr7.1:78589620-78589639 MS.gene022051:CDS 35.0%
GTGGATAGAATTGAAGCATA+TGG + chr7.1:78590560-78590579 MS.gene022051:CDS 35.0%
TGTAGATGGAAACTTCTTTG+AGG - chr7.1:78590993-78591012 None:intergenic 35.0%
TTTAGTGCATTCTTCAAGCA+AGG + chr7.1:78591031-78591050 MS.gene022051:CDS 35.0%
TTTGAAAAGGGTGGAATGAA+TGG + chr7.1:78589801-78589820 MS.gene022051:CDS 35.0%
! CACAGATGCCTTAAATCTTT+TGG + chr7.1:78590862-78590881 MS.gene022051:CDS 35.0%
! CATCTCTTTGAAAGAATCGA+AGG - chr7.1:78590657-78590676 None:intergenic 35.0%
! CGATTTCGAACTCAACTTTT+CGG - chr7.1:78589655-78589674 None:intergenic 35.0%
! GAAGAGAAATGACGGAAATT+AGG - chr7.1:78589438-78589457 None:intergenic 35.0%
! GATTGTTTAAGCATGATGGA+GGG + chr7.1:78590048-78590067 MS.gene022051:CDS 35.0%
! GATTTCGAACTCAACTTTTC+GGG - chr7.1:78589654-78589673 None:intergenic 35.0%
! GGAGACTTTTGTTAAGGTTT+TGG + chr7.1:78590172-78590191 MS.gene022051:CDS 35.0%
! GGTTGTTGTTATGAGGAAAA+AGG + chr7.1:78589734-78589753 MS.gene022051:CDS 35.0%
! GTTATGAGGAAAAAGGGTTT+TGG + chr7.1:78589741-78589760 MS.gene022051:CDS 35.0%
! TACAAGGAATTTGGAGTGAT+TGG - chr7.1:78589412-78589431 None:intergenic 35.0%
!! AGTGGATTGTTTAAGCATGA+TGG + chr7.1:78590044-78590063 MS.gene022051:CDS 35.0%
!! ATTAGCTTGTTCCTTGTTAC+CGG - chr7.1:78590534-78590553 None:intergenic 35.0%
!! GGAAATTGACTAGTTTGTGT+AGG + chr7.1:78589871-78589890 MS.gene022051:CDS 35.0%
!! GTAACTAAGTTATTGGCTCA+GGG + chr7.1:78590833-78590852 MS.gene022051:CDS 35.0%
!! TAACAAGTGTTGGTAGGATT+GGG + chr7.1:78590417-78590436 MS.gene022051:CDS 35.0%
!! TTAACAAGTGTTGGTAGGAT+TGG + chr7.1:78590416-78590435 MS.gene022051:CDS 35.0%
!! TTGGAGTATTTTGAAAAGGG+TGG + chr7.1:78589792-78589811 MS.gene022051:CDS 35.0%
!!! AGGCGTTGATATTTTTTAGG+TGG + chr7.1:78590012-78590031 MS.gene022051:CDS 35.0%
!!! CTTTTGTTAAGGTTTTGGGA+CGG + chr7.1:78590177-78590196 MS.gene022051:CDS 35.0%
!!! GATATTTTTTAGGTGGGTTG+AGG + chr7.1:78590019-78590038 MS.gene022051:CDS 35.0%
!!! GGCGTTGATATTTTTTAGGT+GGG + chr7.1:78590013-78590032 MS.gene022051:CDS 35.0%
!!! GGTTTTGGAGAGTTTAAGTT+CGG + chr7.1:78589980-78589999 MS.gene022051:CDS 35.0%
!!! TGAATCGGTTAAGTTGGTTT+TGG + chr7.1:78589965-78589984 MS.gene022051:CDS 35.0%
!!! TGTTGATGAGTTTTGGGATT+TGG + chr7.1:78589713-78589732 MS.gene022051:CDS 35.0%
AAATGTGTGGAGTGATGAAG+TGG + chr7.1:78589905-78589924 MS.gene022051:CDS 40.0%
ACATGGTACACAGATGTAGA+TGG - chr7.1:78591007-78591026 None:intergenic 40.0%
AGCAGCTTCTTTAGTGTTCA+TGG - chr7.1:78591140-78591159 None:intergenic 40.0%
AGCTTGTAAGTAGAATGTCG+AGG - chr7.1:78590809-78590828 None:intergenic 40.0%
ATCGAACACATATCAAAGCG+TGG + chr7.1:78590929-78590948 MS.gene022051:CDS 40.0%
ATGAAGTGGAGAAGGAGATT+AGG + chr7.1:78589919-78589938 MS.gene022051:CDS 40.0%
ATGCGGGAATCTTTAGTTGA+GGG + chr7.1:78590602-78590621 MS.gene022051:CDS 40.0%
ATTCTGATCTTGATTCTGCG+CGG + chr7.1:78589598-78589617 MS.gene022051:CDS 40.0%
CAAAGAGATGGTTGAGAAAG+AGG + chr7.1:78590667-78590686 MS.gene022051:CDS 40.0%
CATTGCCTTGAGTAACAGAA+CGG - chr7.1:78590969-78590988 None:intergenic 40.0%
CGAAGTGTGTGAGAATGATT+GGG - chr7.1:78589357-78589376 None:intergenic 40.0%
CTCAACAGAAAGGTAAAGCA+CGG - chr7.1:78590281-78590300 None:intergenic 40.0%
GAAATCGTATAACCAGATGC+TGG + chr7.1:78589668-78589687 MS.gene022051:CDS 40.0%
GAAGTGTGTGAGAATGATTG+GGG - chr7.1:78589356-78589375 None:intergenic 40.0%
GACGGAAATTAGGGTTTACA+AGG - chr7.1:78589428-78589447 None:intergenic 40.0%
GAGATTAGGGATTTGGATGT+TGG + chr7.1:78589933-78589952 MS.gene022051:CDS 40.0%
GGAACAAGCTAATGAGTTTG+TGG + chr7.1:78590541-78590560 MS.gene022051:CDS 40.0%
GGATTGTGAGGAAAAATGTG+TGG + chr7.1:78589892-78589911 MS.gene022051:CDS 40.0%
GGATTGTTTAAGCATGATGG+AGG + chr7.1:78590047-78590066 MS.gene022051:CDS 40.0%
GTGAAGTTGAAGGAGTTGTT+TGG + chr7.1:78589831-78589850 MS.gene022051:CDS 40.0%
GTTGAAGGAGTTGTTTGGTA+AGG + chr7.1:78589836-78589855 MS.gene022051:CDS 40.0%
TATGTGTTCGATGAAGGGTT+CGG - chr7.1:78590921-78590940 None:intergenic 40.0%
TGAAGTGGAGAAGGAGATTA+GGG + chr7.1:78589920-78589939 MS.gene022051:CDS 40.0%
TGATGGAGGGAGTTATAATG+CGG + chr7.1:78590061-78590080 MS.gene022051:CDS 40.0%
TTCGAGTGAATCGGTTAAGT+TGG + chr7.1:78589959-78589978 MS.gene022051:CDS 40.0%
TTGGTAAGGATACAGTTGAG+AGG + chr7.1:78589850-78589869 MS.gene022051:CDS 40.0%
! AAGAATCGAAGGCCTTATCA+AGG - chr7.1:78590646-78590665 None:intergenic 40.0%
! CTAGTTTGTGTAGGATTGTG+AGG + chr7.1:78589880-78589899 MS.gene022051:CDS 40.0%
! GAGAATGATTGGGGATTTTG+TGG - chr7.1:78589347-78589366 None:intergenic 40.0%
! GGAAGAGGAGACTTTTGTTA+AGG + chr7.1:78590166-78590185 MS.gene022051:CDS 40.0%
! GGGATTTGGTTGTTGTTATG+AGG + chr7.1:78589727-78589746 MS.gene022051:CDS 40.0%
! TTGAAGGTTTTTACCGGGAA+CGG + chr7.1:78590350-78590369 MS.gene022051:CDS 40.0%
! TTTAAGTTCGGAGCCGAATA+AGG + chr7.1:78589992-78590011 MS.gene022051:CDS 40.0%
!! AACAAGTGTTGGTAGGATTG+GGG + chr7.1:78590418-78590437 MS.gene022051:CDS 40.0%
!! AGGATTCGATTGATCGGTTT+TGG + chr7.1:78590105-78590124 MS.gene022051:CDS 40.0%
!! AGTGATTGGTGTTGAAACGA+AGG - chr7.1:78589398-78589417 None:intergenic 40.0%
!! ATGCTGTTAACGCTGTTTTG+AGG + chr7.1:78589568-78589587 MS.gene022051:CDS 40.0%
!! ATGGAGCTGTTGATGAGTTT+TGG + chr7.1:78589706-78589725 MS.gene022051:CDS 40.0%
!! GAGAAAGGTTGTTTCTGCTA+AGG + chr7.1:78590298-78590317 MS.gene022051:CDS 40.0%
!! GGAGTGGAATAAGGTTTTGA+AGG + chr7.1:78590439-78590458 MS.gene022051:CDS 40.0%
!! GGTAACTAAGTTATTGGCTC+AGG + chr7.1:78590832-78590851 MS.gene022051:CDS 40.0%
!! GTGATTGGTGTTGAAACGAA+GGG - chr7.1:78589397-78589416 None:intergenic 40.0%
!! TGAAGCTTGGACATTTTGAC+AGG - chr7.1:78591081-78591100 None:intergenic 40.0%
!! TGATTGGTGTTGAAACGAAG+GGG - chr7.1:78589396-78589415 None:intergenic 40.0%
!! TGGAGCTGTTGATGAGTTTT+GGG + chr7.1:78589707-78589726 MS.gene022051:CDS 40.0%
!! TTATACGAGTTTGCTATGGC+TGG + chr7.1:78590236-78590255 MS.gene022051:CDS 40.0%
!!! AGGGTGTTGAAGGTTTTTAC+CGG + chr7.1:78590344-78590363 MS.gene022051:CDS 40.0%
!!! TGTTGGGTTTTCGAGTGAAT+CGG + chr7.1:78589950-78589969 MS.gene022051:CDS 40.0%
!!! TTCGATTGATCGGTTTTGGA+AGG + chr7.1:78590109-78590128 MS.gene022051:CDS 40.0%
!!! TTTGTTTTCGAGGGTGTTGA+AGG + chr7.1:78590334-78590353 MS.gene022051:CDS 40.0%
!!! TTTTGGGACGGTTTTGTAAG+AGG + chr7.1:78590189-78590208 MS.gene022051:CDS 40.0%
AACAGAAAGGTAAAGCACGG+CGG - chr7.1:78590278-78590297 None:intergenic 45.0%
CACATATCAAAGCGTGGAAG+TGG + chr7.1:78590935-78590954 MS.gene022051:CDS 45.0%
CTAAAGATTCCCGCATCTTG+CGG - chr7.1:78590598-78590617 None:intergenic 45.0%
GAAGGGAGGATTCGATTGAT+CGG + chr7.1:78590099-78590118 MS.gene022051:CDS 45.0%
GAGTTATAATGCGGTTGCGA+GGG + chr7.1:78590070-78590089 MS.gene022051:CDS 45.0%
GATGCGGGAATCTTTAGTTG+AGG + chr7.1:78590601-78590620 MS.gene022051:CDS 45.0%
GCGAAGTGTGTGAGAATGAT+TGG - chr7.1:78589358-78589377 None:intergenic 45.0%
GGAGAAGGAGATTAGGGATT+TGG + chr7.1:78589926-78589945 MS.gene022051:CDS 45.0%
GGTAAAAGGAGGGAAACCTT+GGG - chr7.1:78590900-78590919 None:intergenic 45.0%
GTGCATTCTTCAAGCAAGGA+AGG + chr7.1:78591035-78591054 MS.gene022051:CDS 45.0%
TAGGATTGGGGAGTGGAATA+AGG + chr7.1:78590430-78590449 MS.gene022051:CDS 45.0%
TGCGCGGAGATTGTTCAAAT+GGG + chr7.1:78589614-78589633 MS.gene022051:CDS 45.0%
TGCGGGAATCTTTAGTTGAG+GGG + chr7.1:78590603-78590622 MS.gene022051:CDS 45.0%
TGTAGGTGGGAACCTTGATA+AGG + chr7.1:78590631-78590650 MS.gene022051:CDS 45.0%
TTCTTCAAGCAAGGAAGGCA+TGG + chr7.1:78591040-78591059 MS.gene022051:CDS 45.0%
! AAAGAAGCTGCTGCTTCTTC+TGG + chr7.1:78591148-78591167 MS.gene022051:CDS 45.0%
! ATCAACGATGACGGTGTGAT+CGG - chr7.1:78589487-78589506 None:intergenic 45.0%
! ATGAAGGGTTCGGTAAAAGG+AGG - chr7.1:78590911-78590930 None:intergenic 45.0%
! TCGATGAAGGGTTCGGTAAA+AGG - chr7.1:78590914-78590933 None:intergenic 45.0%
! TGAAGGGTTCGGTAAAAGGA+GGG - chr7.1:78590910-78590929 None:intergenic 45.0%
! TGAAGGTTTTTACCGGGAAC+GGG + chr7.1:78590351-78590370 MS.gene022051:CDS 45.0%
! TGGTGATGCTGTGAAGTTGA+AGG + chr7.1:78589821-78589840 MS.gene022051:CDS 45.0%
!! ACTAAGTTATTGGCTCAGGG+AGG + chr7.1:78590836-78590855 MS.gene022051:CDS 45.0%
!! CTGGTTCGGAAGAGAAATGA+CGG - chr7.1:78589446-78589465 None:intergenic 45.0%
!! GATTGGTGTTGAAACGAAGG+GGG - chr7.1:78589395-78589414 None:intergenic 45.0%
!! GATTGTGGGTTTGTTGCTAG+CGG + chr7.1:78590470-78590489 MS.gene022051:CDS 45.0%
!! GGAAGGTTGTTGGTGATATG+AGG + chr7.1:78590126-78590145 MS.gene022051:CDS 45.0%
!! GTTGTTGGTGATATGAGGAG+TGG + chr7.1:78590131-78590150 MS.gene022051:CDS 45.0%
!! TGGTGGATTTGAGATGGAAG+AGG + chr7.1:78590151-78590170 MS.gene022051:CDS 45.0%
!! TTAGTTGAGGGGCATTGTGT+AGG + chr7.1:78590614-78590633 MS.gene022051:CDS 45.0%
!!! AGGGTTTTGGTGTTGCGAAA+TGG + chr7.1:78589754-78589773 MS.gene022051:CDS 45.0%
!!! GATCGGTTTTGGAAGGTTGT+TGG + chr7.1:78590116-78590135 MS.gene022051:CDS 45.0%
!!! GGGTGTTGAAGGTTTTTACC+GGG + chr7.1:78590345-78590364 MS.gene022051:CDS 45.0%
!!! GGGTTTTGGTGTTGCGAAAT+GGG + chr7.1:78589755-78589774 MS.gene022051:CDS 45.0%
AAAGAGGGAGTTGCATCTGC+GGG + chr7.1:78590683-78590702 MS.gene022051:CDS 50.0%
ATGACGGTGTGATCGGGATT+GGG - chr7.1:78589480-78589499 None:intergenic 50.0%
CGGTAAAAGGAGGGAAACCT+TGG - chr7.1:78590901-78590920 None:intergenic 50.0%
CTAGTACAGACCGCAAGATG+CGG + chr7.1:78590585-78590604 MS.gene022051:CDS 50.0%
CTGCGCGGAGATTGTTCAAA+TGG + chr7.1:78589613-78589632 MS.gene022051:CDS 50.0%
CTGGGCGTGTTGGGAATTAA+TGG + chr7.1:78589687-78589706 MS.gene022051:CDS 50.0%
GAAAGAGGGAGTTGCATCTG+CGG + chr7.1:78590682-78590701 MS.gene022051:CDS 50.0%
GGAGTTATAATGCGGTTGCG+AGG + chr7.1:78590069-78590088 MS.gene022051:CDS 50.0%
GGGTTGTGGGATAACTGGTT+CGG - chr7.1:78589460-78589479 None:intergenic 50.0%
GTGGAGTGATGAAGTGGAGA+AGG + chr7.1:78589911-78589930 MS.gene022051:CDS 50.0%
TAGTACAGACCGCAAGATGC+GGG + chr7.1:78590586-78590605 MS.gene022051:CDS 50.0%
TGACGCCGTTCTGTTACTCA+AGG + chr7.1:78590961-78590980 MS.gene022051:CDS 50.0%
TTGGGTCTGATGAGAACCCA+AGG + chr7.1:78590881-78590900 MS.gene022051:CDS 50.0%
TTGTTGCTAGCGGTGGTTTG+AGG + chr7.1:78590480-78590499 MS.gene022051:CDS 50.0%
! AGCTGCTGCTTCTTCTGGTA+TGG + chr7.1:78591153-78591172 MS.gene022051:CDS 50.0%
! GGATTGGGTTGTGGGATAAC+TGG - chr7.1:78589465-78589484 None:intergenic 50.0%
! TCAACGATGACGGTGTGATC+GGG - chr7.1:78589486-78589505 None:intergenic 50.0%
! TGCTGCTTCTTCTGGTATGG+TGG + chr7.1:78591156-78591175 MS.gene022051:CDS 50.0%
! TGTCAAAGCATTCCCGTTCC+CGG - chr7.1:78590366-78590385 None:intergenic 50.0%
! TGTGATCGGGATTGGGTTGT+GGG - chr7.1:78589473-78589492 None:intergenic 50.0%
!! GAGGAGTGGTGGATTTGAGA+TGG + chr7.1:78590145-78590164 MS.gene022051:CDS 50.0%
!! GTTGGTGATATGAGGAGTGG+TGG + chr7.1:78590134-78590153 MS.gene022051:CDS 50.0%
!! TTGAGGGGCATTGTGTAGGT+GGG + chr7.1:78590618-78590637 MS.gene022051:CDS 50.0%
!! TTTAGGTGGGTTGAGGAGAG+TGG + chr7.1:78590026-78590045 MS.gene022051:CDS 50.0%
AACCAGATGCTGGGCGTGTT+GGG + chr7.1:78589678-78589697 MS.gene022051:CDS 55.0%
GCGTCGTCACGAATGAAGCT+TGG - chr7.1:78591094-78591113 None:intergenic 55.0%
TAACCAGATGCTGGGCGTGT+TGG + chr7.1:78589677-78589696 MS.gene022051:CDS 55.0%
! GATGACGGTGTGATCGGGAT+TGG - chr7.1:78589481-78589500 None:intergenic 55.0%
! GTGTGATCGGGATTGGGTTG+TGG - chr7.1:78589474-78589493 None:intergenic 55.0%
! GTGTTGGTAGGATTGGGGAG+TGG + chr7.1:78590423-78590442 MS.gene022051:CDS 55.0%
!! GTTGAGGGGCATTGTGTAGG+TGG + chr7.1:78590617-78590636 MS.gene022051:CDS 55.0%
!! TGTGGGTTTGTTGCTAGCGG+TGG + chr7.1:78590473-78590492 MS.gene022051:CDS 55.0%
AAGGTAAAGCACGGCGGCGT+AGG - chr7.1:78590272-78590291 None:intergenic 60.0%
ACTCGGCGCTACCGGTAACA+AGG + chr7.1:78590520-78590539 MS.gene022051:CDS 60.0%
TCGTGACGACGCTGACGTCT+TGG + chr7.1:78591102-78591121 MS.gene022051:CDS 60.0%
TTCCCAACACGCCCAGCATC+TGG - chr7.1:78589683-78589702 None:intergenic 60.0%
!! AATGCGGTTGCGAGGGTGCT+TGG + chr7.1:78590077-78590096 MS.gene022051:CDS 60.0%
!! GCATTTCGACTCGGCGCTAC+CGG + chr7.1:78590512-78590531 MS.gene022051:CDS 60.0%
!! GGTTGCGAGGGTGCTTGGAA+GGG + chr7.1:78590082-78590101 MS.gene022051:CDS 60.0%
!! CGGTTGCGAGGGTGCTTGGA+AGG + chr7.1:78590081-78590100 MS.gene022051:CDS 65.0%
!! TGCGAGGGTGCTTGGAAGGG+AGG + chr7.1:78590085-78590104 MS.gene022051:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 78589300 78591186 78589300 ID=MS.gene022051
chr7.1 mRNA 78589300 78591186 78589300 ID=MS.gene022051.t1;Parent=MS.gene022051
chr7.1 exon 78589300 78591186 78589300 ID=MS.gene022051.t1.exon1;Parent=MS.gene022051.t1
chr7.1 CDS 78589300 78591186 78589300 ID=cds.MS.gene022051.t1;Parent=MS.gene022051.t1
Gene Sequence

>MS.gene022051

ATGAGGAATCAATGGCGCATTCTTCATCTTCTTCTTCGCACTCACCACAAAATCCCCAATCATTCTCACACACTTCGCTCTTTCTCTTCAATCCCCCTTCGTTTCAACACCAATCACTCCAAATTCCTTGTAAACCCTAATTTCCGTCATTTCTCTTCCGAACCAGTTATCCCACAACCCAATCCCGATCACACCGTCATCGTTGATTTATTCTCGAAATCCATAGATCTTAATGAAGTTAACAAACACCTTGATTTGATCAATCACGATGCTGTTAACGCTGTTTTGAGGAAATTTGATTCTGATCTTGATTCTGCGCGGAGATTGTTCAAATGGGTATCGGAGAATTGTCCCGAAAAGTTGAGTTCGAAATCGTATAACCAGATGCTGGGCGTGTTGGGAATTAATGGAGCTGTTGATGAGTTTTGGGATTTGGTTGTTGTTATGAGGAAAAAGGGTTTTGGTGTTGCGAAATGGGTGAAAGATAGAATGTTGGAGTATTTTGAAAAGGGTGGAATGAATGGTGATGCTGTGAAGTTGAAGGAGTTGTTTGGTAAGGATACAGTTGAGAGGAAATTGACTAGTTTGTGTAGGATTGTGAGGAAAAATGTGTGGAGTGATGAAGTGGAGAAGGAGATTAGGGATTTGGATGTTGGGTTTTCGAGTGAATCGGTTAAGTTGGTTTTGGAGAGTTTAAGTTCGGAGCCGAATAAGGCGTTGATATTTTTTAGGTGGGTTGAGGAGAGTGGATTGTTTAAGCATGATGGAGGGAGTTATAATGCGGTTGCGAGGGTGCTTGGAAGGGAGGATTCGATTGATCGGTTTTGGAAGGTTGTTGGTGATATGAGGAGTGGTGGATTTGAGATGGAAGAGGAGACTTTTGTTAAGGTTTTGGGACGGTTTTGTAAGAGGAGAATGATTAAGGATGCTGTTGATTTATACGAGTTTGCTATGGCTGGTGTCAACAAGCCTACGCCGCCGTGCTTTACCTTTCTGTTGAGAAAGGTTGTTTCTGCTAAGGAGTTAGATATGAATTTGTTTTCGAGGGTGTTGAAGGTTTTTACCGGGAACGGGAATGCTTTGACAGATTCTATGGCTGATGCTGTACTGAAATCTTTAACAAGTGTTGGTAGGATTGGGGAGTGGAATAAGGTTTTGAAGGAAATAGAAGATTGTGGGTTTGTTGCTAGCGGTGGTTTGAGGCGTAAAATTGCATTTCGACTCGGCGCTACCGGTAACAAGGAACAAGCTAATGAGTTTGTGGATAGAATTGAAGCATATGGGTCTAGTACAGACCGCAAGATGCGGGAATCTTTAGTTGAGGGGCATTGTGTAGGTGGGAACCTTGATAAGGCCTTCGATTCTTTCAAAGAGATGGTTGAGAAAGAGGGAGTTGCATCTGCGGGCTATACTTTTGATGTGTTGATGAATTCATATTGCCAAATGAATAGAGCGAAAGATGCATACAAGATTCTTTGTAAATGGGTGAACGAAAAAGAGTTAAAGCCTCGACATTCTACTTACAAGCTTTTGGTAACTAAGTTATTGGCTCAGGGAGGATTCACAGATGCCTTAAATCTTTTGGGTCTGATGAGAACCCAAGGTTTCCCTCCTTTTACCGAACCCTTCATCGAACACATATCAAAGCGTGGAAGTGGTGATGACGCCGTTCTGTTACTCAAGGCAATGACCTCAAAGAAGTTTCCATCTACATCTGTGTACCATGTAATGTTTAGTGCATTCTTCAAGCAAGGAAGGCATGGAGAAGCACAAAATTTCCTGTCAAAATGTCCAAGCTTCATTCGTGACGACGCTGACGTCTTGGCTCTCTTTTGTTCCATGAACACTAAAGAAGCTGCTGCTTCTTCTGGTATGGTGGCTGCTTAA
Protein sequence

>MS.gene022051.t1

MRNQWRILHLLLRTHHKIPNHSHTLRSFSSIPLRFNTNHSKFLVNPNFRHFSSEPVIPQPNPDHTVIVDLFSKSIDLNEVNKHLDLINHDAVNAVLRKFDSDLDSARRLFKWVSENCPEKLSSKSYNQMLGVLGINGAVDEFWDLVVVMRKKGFGVAKWVKDRMLEYFEKGGMNGDAVKLKELFGKDTVERKLTSLCRIVRKNVWSDEVEKEIRDLDVGFSSESVKLVLESLSSEPNKALIFFRWVEESGLFKHDGGSYNAVARVLGREDSIDRFWKVVGDMRSGGFEMEEETFVKVLGRFCKRRMIKDAVDLYEFAMAGVNKPTPPCFTFLLRKVVSAKELDMNLFSRVLKVFTGNGNALTDSMADAVLKSLTSVGRIGEWNKVLKEIEDCGFVASGGLRRKIAFRLGATGNKEQANEFVDRIEAYGSSTDRKMRESLVEGHCVGGNLDKAFDSFKEMVEKEGVASAGYTFDVLMNSYCQMNRAKDAYKILCKWVNEKELKPRHSTYKLLVTKLLAQGGFTDALNLLGLMRTQGFPPFTEPFIEHISKRGSGDDAVLLLKAMTSKKFPSTSVYHVMFSAFFKQGRHGEAQNFLSKCPSFIRDDADVLALFCSMNTKEAAASSGMVAA