AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022809

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022809.t1 MTR_8g011780 97.203 429 12 0 1 429 1 429 0.0 853
MS.gene022809.t1 MTR_7g053200 58.508 429 159 6 13 429 6 427 4.17e-161 461
MS.gene022809.t1 MTR_2g098240 43.944 355 164 6 12 361 9 333 1.39e-93 287
MS.gene022809.t1 MTR_4g065080 42.175 377 171 8 15 361 10 369 2.15e-93 288
MS.gene022809.t1 MTR_6g004720 37.376 404 190 12 15 380 248 626 1.37e-75 248
MS.gene022809.t1 MTR_2g062850 38.583 381 198 11 7 365 158 524 5.68e-75 244
MS.gene022809.t1 MTR_2g027240 38.205 390 189 10 11 367 197 567 9.66e-75 245
MS.gene022809.t1 MTR_7g081665 38.701 385 187 10 11 367 357 720 1.94e-74 247
MS.gene022809.t1 MTR_8g446990 38.400 375 185 11 14 361 128 483 9.67e-74 240
MS.gene022809.t1 MTR_7g033640 37.659 393 183 12 8 361 220 589 6.79e-72 238
MS.gene022809.t1 MTR_8g006870 38.933 375 179 12 15 360 367 720 9.91e-72 240
MS.gene022809.t1 MTR_2g085065 40.643 342 175 9 26 348 97 429 1.32e-70 230
MS.gene022809.t1 MTR_1g060790 38.133 375 196 10 15 367 467 827 1.17e-69 236
MS.gene022809.t1 MTR_2g018990 38.298 376 191 11 11 363 70 427 4.04e-69 226
MS.gene022809.t1 MTR_8g070530 39.143 350 159 7 23 363 602 906 1.83e-68 234
MS.gene022809.t1 MTR_8g089420 36.757 370 205 9 11 362 66 424 9.64e-67 220
MS.gene022809.t1 MTR_4g113790 37.598 383 180 11 20 361 93 457 4.49e-66 219
MS.gene022809.t1 MTR_7g104180 36.524 397 210 12 15 385 489 869 1.24e-65 225
MS.gene022809.t1 MTR_3g010260 36.757 370 198 9 15 361 412 768 1.25e-65 224
MS.gene022809.t1 MTR_2g069990 36.800 375 170 10 15 364 91 423 1.34e-64 215
MS.gene022809.t1 MTR_2g095980 37.398 369 184 9 13 372 366 696 8.67e-64 218
MS.gene022809.t1 MTR_2g095980 37.398 369 184 9 13 372 621 951 1.54e-62 218
MS.gene022809.t1 MTR_2g095980 37.398 369 184 9 13 372 621 951 1.88e-62 218
MS.gene022809.t1 MTR_4g061610 36.826 334 155 9 44 366 662 950 1.86e-57 203
MS.gene022809.t1 MTR_6g470940 35.376 359 180 12 10 361 870 1183 4.17e-49 180
MS.gene022809.t1 MTR_5g069000 34.262 359 183 11 10 361 756 1068 7.37e-47 173
MS.gene022809.t1 MTR_4g035835 34.540 359 182 12 10 361 752 1064 1.79e-46 172
MS.gene022809.t1 MTR_1g019340 31.347 386 212 14 16 386 107 454 1.19e-41 153
MS.gene022809.t1 MTR_1g019340 31.944 360 196 12 16 364 107 428 2.56e-40 150
MS.gene022809.t1 MTR_3g104700 31.268 355 193 10 16 354 93 412 1.09e-38 146
MS.gene022809.t1 MTR_1g069735 28.212 358 199 10 20 361 120 435 1.36e-37 142
MS.gene022809.t1 MTR_1g069735 28.212 358 199 10 20 361 120 435 1.55e-37 142
MS.gene022809.t1 MTR_1g069735 28.212 358 199 10 20 361 120 435 4.55e-37 142
MS.gene022809.t1 MTR_1g075880 29.189 370 202 11 8 361 108 433 5.66e-37 142
MS.gene022809.t1 MTR_3g104700 30.108 372 192 13 16 354 93 429 1.18e-35 138
MS.gene022809.t1 MTR_1g442790 29.076 368 206 13 8 361 101 427 2.03e-35 137
MS.gene022809.t1 MTR_1g442790 29.076 368 206 13 8 361 101 427 2.85e-35 137
MS.gene022809.t1 MTR_1g042700 27.841 352 214 10 16 361 114 431 1.03e-34 135
MS.gene022809.t1 MTR_7g097150 28.378 370 200 13 20 368 120 445 2.52e-34 134
MS.gene022809.t1 MTR_2g040150 29.050 358 195 9 16 353 112 430 5.66e-34 133
MS.gene022809.t1 MTR_1g090917 29.261 352 171 11 16 358 50 332 8.39e-30 121
MS.gene022809.t1 MTR_1g090917 29.261 352 171 11 16 358 50 332 9.40e-30 121
MS.gene022809.t1 MTR_1g090917 31.179 263 116 8 105 358 1 207 1.68e-27 112
MS.gene022809.t1 MTR_1g090917 30.798 263 117 8 105 358 1 207 1.74e-27 112
MS.gene022809.t1 MTR_7g073520 36.702 188 104 5 3 190 134 306 2.40e-25 108
MS.gene022809.t1 MTR_7g073520 38.938 113 63 2 242 348 297 409 3.23e-17 84.0
MS.gene022809.t1 MTR_2g020380 27.077 325 163 7 22 344 6 258 4.50e-25 108
MS.gene022809.t1 MTR_3g110405 27.726 321 154 9 26 343 43 288 3.98e-24 102
MS.gene022809.t1 MTR_4g107280 36.994 173 87 6 16 181 88 245 2.15e-23 102
MS.gene022809.t1 MTR_4g107280 40.678 118 58 3 240 348 243 357 1.92e-19 90.1
MS.gene022809.t1 MTR_4g006970 24.425 348 186 9 1 344 1 275 5.80e-23 100
MS.gene022809.t1 MTR_8g035890 27.160 324 154 10 26 344 22 268 6.52e-23 98.2
MS.gene022809.t1 MTR_8g040300 25.697 323 158 9 26 343 16 261 2.69e-20 90.5
MS.gene022809.t1 MTR_4g107280 40.678 118 58 3 240 348 204 318 1.31e-19 90.5
MS.gene022809.t1 MTR_4g107280 40.659 91 46 3 95 181 120 206 6.39e-15 76.3
MS.gene022809.t1 MTR_2g006330 25.714 350 171 12 21 359 5 276 1.62e-19 89.7
MS.gene022809.t1 MTR_3g072320 26.730 318 150 10 26 337 18 258 3.28e-19 89.7
MS.gene022809.t1 MTR_4g086855 25.526 333 161 11 21 343 24 279 6.13e-19 88.2
MS.gene022809.t1 MTR_4g099240 25.217 345 171 11 26 360 11 278 6.98e-19 87.8
MS.gene022809.t1 MTR_1g034030 25.225 333 162 11 21 343 25 280 8.68e-19 87.8
MS.gene022809.t1 MTR_3g088715 40.000 105 56 2 245 344 24 126 1.04e-18 82.4
MS.gene022809.t1 MTR_2g016340 26.316 323 161 10 26 344 18 267 1.25e-18 88.2
MS.gene022809.t1 MTR_8g089975 26.048 334 158 12 21 343 5 260 2.10e-18 86.3
MS.gene022809.t1 MTR_6g012990 26.781 351 169 12 17 362 16 283 4.73e-18 85.5
MS.gene022809.t1 MTR_3g466400 23.676 321 172 9 26 344 20 269 5.62e-18 86.3
MS.gene022809.t1 MTR_6g012990 26.781 351 169 12 17 362 16 283 1.25e-17 85.5
MS.gene022809.t1 MTR_8g095330 25.449 334 160 12 21 343 6 261 3.73e-17 82.8
MS.gene022809.t1 MTR_8g086380 24.620 329 160 8 26 344 32 282 7.56e-17 82.8
MS.gene022809.t1 MTR_5g064540 27.138 269 127 8 83 343 53 260 1.92e-16 80.5
MS.gene022809.t1 MTR_2g105010 25.357 280 134 8 73 344 57 269 2.80e-16 80.9
MS.gene022809.t1 MTR_5g013550 24.571 350 173 12 21 359 7 276 3.18e-16 79.7
MS.gene022809.t1 MTR_7g116390 24.438 356 182 13 13 356 9 289 3.36e-16 79.3
MS.gene022809.t1 MTR_3g466480 33.117 154 90 3 25 178 26 166 4.23e-16 80.5
MS.gene022809.t1 MTR_1g076370 22.857 280 145 8 75 344 60 278 4.52e-16 80.1
MS.gene022809.t1 MTR_2g023890 31.016 187 100 7 232 396 144 323 2.84e-15 77.0
MS.gene022809.t1 MTR_1g103760 24.012 329 176 9 26 351 18 275 3.59e-15 77.4
MS.gene022809.t1 MTR_4g086660 25.882 340 174 14 14 344 130 400 6.50e-15 77.0
MS.gene022809.t1 MTR_4g029020 24.260 338 181 10 10 344 2 267 7.60e-15 76.6
MS.gene022809.t1 MTR_7g106710 35.507 138 79 4 225 355 273 407 9.36e-15 76.3
MS.gene022809.t1 MTR_7g106710 35.507 138 79 4 225 355 273 407 1.06e-14 76.3
MS.gene022809.t1 MTR_7g106710 35.507 138 79 4 225 355 273 407 1.19e-14 76.3
MS.gene022809.t1 MTR_7g106710 35.507 138 79 4 225 355 273 407 1.24e-14 76.3
MS.gene022809.t1 MTR_6g048250 39.316 117 62 3 248 362 174 283 1.44e-14 75.1
MS.gene022809.t1 MTR_3g112210 25.656 343 211 11 23 363 35 335 1.64e-14 75.1
MS.gene022809.t1 MTR_4g131060 23.692 325 169 10 25 344 23 273 1.73e-14 75.5
MS.gene022809.t1 MTR_6g048250 39.316 117 62 3 248 362 174 283 2.01e-14 75.5
MS.gene022809.t1 MTR_6g048250 39.316 117 62 3 248 362 174 283 2.11e-14 75.1
MS.gene022809.t1 MTR_6g087000 35.294 136 78 5 236 364 902 1034 7.28e-14 74.3
MS.gene022809.t1 MTR_7g113490 30.968 155 100 3 26 180 74 221 1.56e-13 73.2
MS.gene022809.t1 MTR_3g099920 32.374 139 73 5 251 377 177 306 3.63e-13 71.6
MS.gene022809.t1 MTR_1g054865 24.731 279 134 9 88 355 220 433 4.19e-13 71.6
MS.gene022809.t1 MTR_5g045190 27.500 160 103 3 21 180 240 386 5.40e-13 71.6
MS.gene022809.t1 MTR_3g095620 33.645 107 65 1 245 345 179 285 5.62e-13 69.7
MS.gene022809.t1 MTR_7g072575 24.868 378 192 15 26 399 18 307 7.89e-13 70.5
MS.gene022809.t1 MTR_8g024100 31.481 108 66 2 244 344 168 274 1.12e-12 70.5
MS.gene022809.t1 MTR_7g106730 32.000 125 77 3 225 344 226 347 1.66e-12 68.9
MS.gene022809.t1 MTR_8g086000 24.169 331 195 10 23 343 35 319 1.85e-12 68.9
MS.gene022809.t1 MTR_8g086000 24.169 331 195 10 23 343 78 362 2.17e-12 68.9
MS.gene022809.t1 MTR_5g075060 38.542 96 57 2 251 344 172 267 2.52e-12 68.9
MS.gene022809.t1 MTR_1g080020 32.692 104 65 1 245 343 161 264 2.57e-12 67.4
MS.gene022809.t1 MTR_8g079790 23.622 254 129 6 96 344 198 391 3.49e-12 68.6
MS.gene022809.t1 MTR_8g071230 23.324 373 169 12 21 362 5 291 4.18e-12 68.2
MS.gene022809.t1 MTR_1g026190 36.275 102 59 2 248 344 241 341 6.23e-12 67.8
MS.gene022809.t1 MTR_1g013700 36.792 106 58 4 251 350 173 275 7.26e-12 67.4
MS.gene022809.t1 MTR_6g012980 33.065 124 66 5 248 365 228 340 7.86e-12 67.0
MS.gene022809.t1 MTR_4g132070 34.314 102 61 2 248 344 250 350 8.35e-12 67.4
MS.gene022809.t1 MTR_3g073250 33.333 117 69 3 248 360 424 535 9.80e-12 67.0
MS.gene022809.t1 MTR_0028s0170 35.238 105 62 2 245 344 234 337 1.11e-11 67.0
MS.gene022809.t1 MTR_5g075100 30.719 153 94 4 26 178 29 169 1.39e-11 66.2
MS.gene022809.t1 MTR_5g009830 34.314 102 61 2 248 344 226 326 2.11e-11 65.9
MS.gene022809.t1 MTR_5g026960 22.520 373 172 14 21 362 5 291 2.12e-11 65.9
MS.gene022809.t1 MTR_5g089320 34.783 115 67 3 248 355 227 340 2.27e-11 65.9
MS.gene022809.t1 MTR_5g009830 34.314 102 61 2 248 344 226 326 3.04e-11 65.5
MS.gene022809.t1 MTR_1g096490 37.383 107 56 4 251 351 192 293 3.25e-11 65.5
MS.gene022809.t1 MTR_5g088350 34.127 126 63 4 251 371 174 284 3.58e-11 64.7
MS.gene022809.t1 MTR_5g088350 34.127 126 63 4 251 371 174 284 3.81e-11 65.1
MS.gene022809.t1 MTR_5g088350 34.127 126 63 4 251 371 174 284 4.05e-11 65.1
MS.gene022809.t1 MTR_1g105290 29.032 155 103 3 26 180 61 208 5.65e-11 65.1
MS.gene022809.t1 MTR_1g105290 29.032 155 103 3 26 180 61 208 6.27e-11 64.7
MS.gene022809.t1 MTR_1g105290 29.032 155 103 3 26 180 61 208 6.40e-11 64.7
MS.gene022809.t1 MTR_1g055255 32.653 98 60 2 251 343 286 382 9.76e-11 64.3
MS.gene022809.t1 MTR_7g092360 26.857 175 114 4 8 180 4 166 9.93e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022809.t1 AT3G25250 56.028 423 169 5 13 429 10 421 7.07e-148 427
MS.gene022809.t1 AT4G13000 59.524 378 126 6 10 387 10 360 7.75e-145 417
MS.gene022809.t1 AT3G20830 42.547 369 165 9 15 361 16 359 1.53e-86 270
MS.gene022809.t1 AT1G51170 41.129 372 166 9 14 361 16 358 2.80e-86 269
MS.gene022809.t1 AT1G79250 41.033 368 180 11 16 361 145 497 2.38e-78 253
MS.gene022809.t1 AT1G79250 41.033 368 180 11 16 361 145 497 2.38e-78 253
MS.gene022809.t1 AT1G79250 41.033 368 180 11 16 361 145 497 2.38e-78 253
MS.gene022809.t1 AT1G79250 41.033 368 180 11 16 361 145 497 2.38e-78 253
MS.gene022809.t1 AT1G16440 39.037 374 197 10 3 361 96 453 1.94e-76 246
MS.gene022809.t1 AT3G12690 39.410 373 184 11 15 366 180 531 4.86e-75 245
MS.gene022809.t1 AT3G12690 39.410 373 184 11 15 366 180 531 4.86e-75 245
MS.gene022809.t1 AT3G12690 39.410 373 184 11 15 366 180 531 4.86e-75 245
MS.gene022809.t1 AT5G47750 39.050 379 191 9 15 367 186 550 1.92e-74 243
MS.gene022809.t1 AT2G44830 38.830 376 194 9 15 367 358 720 5.35e-74 246
MS.gene022809.t1 AT2G44830 38.830 376 194 9 15 367 358 720 5.35e-74 246
MS.gene022809.t1 AT2G44830 38.830 376 194 9 15 367 358 720 5.35e-74 246
MS.gene022809.t1 AT5G55910 37.337 383 199 11 15 370 104 472 6.24e-73 237
MS.gene022809.t1 AT5G55910 37.337 383 199 11 15 370 104 472 6.24e-73 237
MS.gene022809.t1 AT4G26610 37.598 383 188 11 15 367 118 479 2.63e-72 236
MS.gene022809.t1 AT3G44610 39.316 351 186 9 26 352 75 422 1.44e-71 232
MS.gene022809.t1 AT5G40030 39.459 370 193 10 15 366 109 465 3.92e-71 233
MS.gene022809.t1 AT3G27580 38.832 394 202 12 14 381 176 556 5.13e-71 234
MS.gene022809.t1 AT3G27580 38.832 394 202 12 14 381 176 556 5.13e-71 234
MS.gene022809.t1 AT2G36350 38.503 374 193 10 14 361 553 915 8.32e-69 235
MS.gene022809.t1 AT5G58140 38.056 360 171 9 20 371 577 892 1.05e-68 234
MS.gene022809.t1 AT5G58140 38.056 360 171 9 20 371 577 892 1.05e-68 234
MS.gene022809.t1 AT5G58140 38.056 360 171 9 20 371 577 892 1.05e-68 234
MS.gene022809.t1 AT5G58140 38.056 360 171 9 20 371 577 892 1.05e-68 234
MS.gene022809.t1 AT5G58140 38.056 360 171 9 20 371 577 892 1.05e-68 234
MS.gene022809.t1 AT2G34650 36.740 362 198 7 13 361 68 411 1.05e-68 224
MS.gene022809.t1 AT3G52890 37.895 380 197 10 14 365 532 900 1.58e-67 231
MS.gene022809.t1 AT3G52890 37.895 380 197 10 14 365 532 900 1.58e-67 231
MS.gene022809.t1 AT3G52890 37.895 380 197 10 14 365 532 900 1.58e-67 231
MS.gene022809.t1 AT3G52890 37.895 380 197 10 14 365 532 900 1.58e-67 231
MS.gene022809.t1 AT5G58140 38.596 342 158 9 20 353 577 874 1.13e-65 226
MS.gene022809.t1 AT2G26700 33.254 421 191 11 13 361 80 482 6.65e-65 217
MS.gene022809.t1 AT5G03640 34.663 401 208 13 14 381 535 914 1.36e-63 220
MS.gene022809.t1 AT5G03640 34.663 401 208 13 14 381 535 914 1.36e-63 220
MS.gene022809.t1 AT3G45780 36.031 383 191 9 15 387 658 996 4.57e-62 217
MS.gene022809.t1 AT3G45780 36.031 383 191 9 15 387 658 996 4.57e-62 217
MS.gene022809.t1 AT1G53700 35.933 359 197 7 15 365 88 421 4.12e-61 206
MS.gene022809.t1 AT3G14370 34.688 369 188 7 15 364 83 417 1.25e-57 197
MS.gene022809.t1 AT1G45160 34.946 372 183 12 10 374 663 982 1.39e-49 181
MS.gene022809.t1 AT1G45160 34.946 372 183 12 10 374 663 982 1.54e-49 181
MS.gene022809.t1 AT3G17850 34.637 358 183 11 1 351 866 1179 3.89e-47 174
MS.gene022809.t1 AT5G62310 34.746 354 180 10 5 351 742 1051 6.27e-47 173
MS.gene022809.t1 AT1G48490 32.099 405 209 13 1 395 812 1160 9.78e-46 170
MS.gene022809.t1 AT1G48490 32.099 405 209 13 1 395 812 1160 9.78e-46 170
MS.gene022809.t1 AT1G48490 32.099 405 209 13 1 395 812 1160 9.78e-46 170
MS.gene022809.t1 AT1G48490 32.099 405 209 13 1 395 813 1161 1.06e-45 170
MS.gene022809.t1 AT1G30640 31.285 358 193 12 20 361 27 347 2.80e-40 150
MS.gene022809.t1 AT1G30640 31.285 358 193 12 20 361 120 440 7.35e-40 150
MS.gene022809.t1 AT1G30640 31.285 358 193 12 20 361 120 440 7.35e-40 150
MS.gene022809.t1 AT5G09890 32.620 374 204 12 8 368 93 431 3.12e-39 148
MS.gene022809.t1 AT5G09890 32.620 374 204 12 8 368 93 431 3.39e-39 147
MS.gene022809.t1 AT3G10540 29.443 377 182 10 4 362 20 330 4.73e-38 144
MS.gene022809.t1 AT4G33080 30.726 358 192 11 16 354 93 413 1.56e-37 143
MS.gene022809.t1 AT4G33080 30.726 358 192 11 16 354 93 413 2.11e-37 143
MS.gene022809.t1 AT5G04510 28.496 379 187 10 2 362 17 329 9.44e-37 139
MS.gene022809.t1 AT5G04510 28.496 379 187 10 2 362 17 329 2.97e-36 139
MS.gene022809.t1 AT4G14350 28.495 372 202 12 8 361 110 435 4.72e-34 134
MS.gene022809.t1 AT4G14350 28.495 372 202 12 8 361 110 435 6.63e-34 133
MS.gene022809.t1 AT4G14350 28.495 372 202 12 8 361 110 435 6.63e-34 133
MS.gene022809.t1 AT4G14350 28.495 372 202 12 8 361 110 435 6.63e-34 133
MS.gene022809.t1 AT2G20470 27.374 358 201 11 22 363 126 440 1.68e-33 132
MS.gene022809.t1 AT2G20470 27.794 349 194 10 22 354 126 432 1.78e-33 132
MS.gene022809.t1 AT2G20470 27.794 349 194 10 22 354 126 432 1.78e-33 132
MS.gene022809.t1 AT1G03920 28.455 369 205 11 8 361 15 339 7.94e-33 129
MS.gene022809.t1 AT3G23310 27.671 365 216 11 8 361 111 438 1.71e-32 129
MS.gene022809.t1 AT1G03920 28.455 369 205 11 8 361 128 452 2.17e-32 129
MS.gene022809.t1 AT1G03920 28.455 369 205 11 8 361 128 452 2.17e-32 129
MS.gene022809.t1 AT2G19400 29.480 346 204 10 22 354 107 425 4.78e-31 125
MS.gene022809.t1 AT5G04510 27.976 336 164 8 2 324 17 287 7.08e-31 120
MS.gene022809.t1 AT5G18700 28.045 353 171 11 22 372 6 277 1.33e-26 113
MS.gene022809.t1 AT2G25880 27.187 320 155 7 26 342 92 336 3.15e-26 108
MS.gene022809.t1 AT2G25090 26.645 304 161 7 43 344 36 279 7.58e-24 103
MS.gene022809.t1 AT3G08730 35.429 175 98 5 16 190 133 292 3.52e-23 101
MS.gene022809.t1 AT3G08730 43.243 111 52 4 246 348 287 394 1.23e-17 85.1
MS.gene022809.t1 AT3G08730 35.429 175 98 5 16 190 133 292 3.52e-23 101
MS.gene022809.t1 AT3G08730 43.243 111 52 4 246 348 287 394 1.23e-17 85.1
MS.gene022809.t1 AT3G08720 35.632 174 97 5 16 189 139 297 3.77e-23 101
MS.gene022809.t1 AT3G08720 39.370 127 66 4 246 364 293 416 1.90e-17 84.7
MS.gene022809.t1 AT3G08720 35.632 174 97 5 16 189 139 297 3.77e-23 101
MS.gene022809.t1 AT3G08720 39.370 127 66 4 246 364 293 416 1.90e-17 84.7
MS.gene022809.t1 AT3G08720 35.632 174 97 5 16 189 139 297 3.77e-23 101
MS.gene022809.t1 AT3G08720 39.370 127 66 4 246 364 293 416 1.90e-17 84.7
MS.gene022809.t1 AT3G08720 35.632 174 97 5 16 189 139 297 3.77e-23 101
MS.gene022809.t1 AT3G08720 39.370 127 66 4 246 364 293 416 1.90e-17 84.7
MS.gene022809.t1 AT2G25880 27.414 321 155 9 26 343 31 276 3.91e-23 99.0
MS.gene022809.t1 AT2G25880 27.414 321 155 9 26 343 44 289 6.42e-23 98.6
MS.gene022809.t1 AT4G32830 26.791 321 157 9 26 343 37 282 9.06e-22 95.5
MS.gene022809.t1 AT3G01090 25.613 367 184 11 1 362 1 283 3.12e-20 93.2
MS.gene022809.t1 AT3G01090 25.613 367 184 11 1 362 1 283 3.12e-20 93.2
MS.gene022809.t1 AT4G33950 25.826 333 160 11 21 343 22 277 3.40e-20 91.7
MS.gene022809.t1 AT3G01090 25.613 367 184 11 1 362 24 306 3.62e-20 93.2
MS.gene022809.t1 AT4G33950 25.826 333 160 11 21 343 22 277 5.63e-20 91.3
MS.gene022809.t1 AT5G57630 26.689 296 137 11 47 337 37 257 5.96e-20 91.7
MS.gene022809.t1 AT5G57630 26.689 296 137 11 47 337 37 257 6.13e-20 91.7
MS.gene022809.t1 AT4G40010 26.705 352 159 13 22 362 6 269 1.01e-19 90.5
MS.gene022809.t1 AT2G45490 27.414 321 155 12 26 343 28 273 9.00e-19 86.7
MS.gene022809.t1 AT1G18350 24.128 344 177 13 9 344 37 304 2.31e-18 85.9
MS.gene022809.t1 AT1G60940 25.714 350 171 12 21 359 5 276 2.72e-18 86.3
MS.gene022809.t1 AT1G60940 25.714 350 171 12 21 359 5 276 2.72e-18 86.3
MS.gene022809.t1 AT4G18700 25.077 323 165 9 26 344 32 281 5.19e-18 86.7
MS.gene022809.t1 AT5G10930 27.703 296 140 10 46 337 36 261 1.05e-17 85.5
MS.gene022809.t1 AT3G50530 24.850 334 191 12 26 344 154 442 2.97e-17 84.7
MS.gene022809.t1 AT5G45810 24.768 323 166 9 26 344 34 283 9.18e-17 82.8
MS.gene022809.t1 AT2G20050 37.600 125 53 3 243 351 928 1043 1.86e-16 82.4
MS.gene022809.t1 AT2G20050 37.600 125 53 3 243 351 931 1046 1.95e-16 82.4
MS.gene022809.t1 AT5G39440 36.301 146 70 5 248 379 174 310 1.96e-16 81.6
MS.gene022809.t1 AT2G30360 33.125 160 96 4 26 185 27 175 8.16e-16 79.3
MS.gene022809.t1 AT2G18170 25.231 325 205 9 23 346 35 322 1.85e-15 77.8
MS.gene022809.t1 AT1G76040 24.923 325 165 11 26 343 118 370 3.86e-15 77.8
MS.gene022809.t1 AT1G76040 24.923 325 165 11 26 343 118 370 4.42e-15 77.8
MS.gene022809.t1 AT3G29160 26.781 351 169 15 2 344 3 273 1.06e-14 75.5
MS.gene022809.t1 AT1G08650 37.143 105 61 1 245 344 170 274 1.41e-14 74.3
MS.gene022809.t1 AT1G54960 29.032 155 103 3 26 180 74 221 2.68e-14 75.5
MS.gene022809.t1 AT1G54960 29.032 155 103 3 26 180 74 221 2.68e-14 75.5
MS.gene022809.t1 AT1G08650 39.175 97 54 1 245 336 170 266 2.89e-14 73.2
MS.gene022809.t1 AT4G04720 36.893 103 59 2 248 345 239 340 3.18e-14 75.1
MS.gene022809.t1 AT4G04720 36.893 103 59 2 248 345 239 340 3.18e-14 75.1
MS.gene022809.t1 AT2G35890 34.400 125 74 3 225 344 270 391 4.04e-14 74.7
MS.gene022809.t1 AT2G35890 34.400 125 74 3 225 344 270 391 4.04e-14 74.7
MS.gene022809.t1 AT3G29160 41.414 99 56 2 248 344 175 273 5.01e-14 74.3
MS.gene022809.t1 AT3G29160 41.414 99 56 2 248 344 175 273 5.01e-14 74.3
MS.gene022809.t1 AT2G45490 27.698 278 126 11 26 303 28 230 6.96e-14 71.6
MS.gene022809.t1 AT1G73500 22.874 341 180 12 12 344 42 307 9.52e-14 72.0
MS.gene022809.t1 AT3G04530 27.513 189 118 5 176 346 85 272 1.10e-13 71.6
MS.gene022809.t1 AT1G09000 29.032 155 103 3 26 180 75 222 1.71e-13 72.8
MS.gene022809.t1 AT1G09000 29.032 155 103 3 26 180 75 222 1.92e-13 72.8
MS.gene022809.t1 AT3G06030 30.323 155 101 3 26 180 74 221 1.93e-13 72.8
MS.gene022809.t1 AT1G50700 36.275 102 59 2 248 344 232 332 4.37e-13 71.6
MS.gene022809.t1 AT1G10210 23.780 328 200 8 23 343 35 319 4.62e-13 70.9
MS.gene022809.t1 AT1G10210 23.780 328 200 8 23 343 35 319 4.62e-13 70.9
MS.gene022809.t1 AT1G10210 23.780 328 200 8 23 343 35 319 4.62e-13 70.9
MS.gene022809.t1 AT1G50700 36.275 102 59 2 248 344 232 332 4.65e-13 71.2
MS.gene022809.t1 AT1G50700 36.275 102 59 2 248 344 232 332 5.21e-13 70.9
MS.gene022809.t1 AT5G45820 32.680 153 90 4 26 178 18 157 7.88e-13 70.5
MS.gene022809.t1 AT5G45820 35.922 103 50 3 251 344 172 267 7.41e-11 64.3
MS.gene022809.t1 AT4G04740 37.500 104 57 3 248 345 228 329 1.01e-12 70.5
MS.gene022809.t1 AT4G04740 37.500 104 57 3 248 345 228 329 1.30e-12 70.1
MS.gene022809.t1 AT4G04740 37.500 104 57 3 248 345 228 329 1.30e-12 70.1
MS.gene022809.t1 AT4G04740 37.500 104 57 3 248 345 228 329 1.30e-12 70.1
MS.gene022809.t1 AT4G04740 37.500 104 57 3 248 345 228 329 1.30e-12 70.1
MS.gene022809.t1 AT4G04740 37.500 104 57 3 248 345 228 329 1.30e-12 70.1
MS.gene022809.t1 AT4G04740 37.500 104 57 3 248 345 228 329 1.30e-12 70.1
MS.gene022809.t1 AT4G04700 35.294 102 60 2 248 344 191 291 2.57e-12 68.9
MS.gene022809.t1 AT5G25110 29.412 153 95 4 26 178 49 188 2.78e-12 68.9
MS.gene022809.t1 AT4G21940 33.981 103 62 2 248 345 261 362 3.43e-12 68.6
MS.gene022809.t1 AT1G69220 27.528 178 115 4 4 180 232 396 3.50e-12 68.9
MS.gene022809.t1 AT1G48260 36.000 100 54 3 251 344 87 182 3.54e-12 67.8
MS.gene022809.t1 AT1G48260 36.000 100 54 3 251 344 87 182 3.54e-12 67.8
MS.gene022809.t1 AT1G48260 36.000 100 54 3 251 344 87 182 3.54e-12 67.8
MS.gene022809.t1 AT1G48260 36.000 100 54 3 251 344 87 182 3.54e-12 67.8
MS.gene022809.t1 AT4G19110 22.520 373 172 13 21 362 5 291 3.79e-12 68.2
MS.gene022809.t1 AT4G21940 33.981 103 62 2 248 345 261 362 3.92e-12 68.6
MS.gene022809.t1 AT4G21940 33.981 103 62 2 248 345 261 362 3.93e-12 68.6
MS.gene022809.t1 AT4G19110 22.520 373 172 13 21 362 5 291 4.78e-12 68.2
MS.gene022809.t1 AT3G20410 34.314 102 61 2 248 344 250 350 6.21e-12 67.8
MS.gene022809.t1 AT3G20410 34.314 102 61 2 248 344 250 350 6.21e-12 67.8
MS.gene022809.t1 AT4G23650 34.286 105 63 2 245 344 234 337 6.66e-12 67.8
MS.gene022809.t1 AT1G48260 36.000 100 54 3 251 344 172 267 6.96e-12 67.4
MS.gene022809.t1 AT2G25880 32.673 101 65 1 246 343 144 244 9.73e-12 65.5
MS.gene022809.t1 AT1G78290 35.849 106 60 3 246 343 155 260 1.07e-11 66.2
MS.gene022809.t1 AT1G78290 35.849 106 60 3 246 343 155 260 1.07e-11 66.2
MS.gene022809.t1 AT1G76040 38.235 102 55 3 248 343 33 132 1.08e-11 66.2
MS.gene022809.t1 AT1G76040 38.235 102 55 3 248 343 33 132 1.08e-11 66.2
MS.gene022809.t1 AT5G35410 35.185 108 62 3 242 344 161 265 1.16e-11 66.2
MS.gene022809.t1 AT3G50530 31.452 124 77 3 226 344 291 411 1.28e-11 67.0
MS.gene022809.t1 AT4G04695 34.259 108 65 2 242 344 185 291 1.49e-11 66.6
MS.gene022809.t1 AT5G35410 35.185 108 62 3 242 344 161 265 1.75e-11 66.2
MS.gene022809.t1 AT5G19360 33.333 102 62 2 248 344 227 327 1.81e-11 66.2
MS.gene022809.t1 AT5G08590 32.787 122 74 3 246 359 155 276 3.38e-11 64.7
MS.gene022809.t1 AT1G69220 28.105 153 97 3 28 180 230 369 3.94e-11 65.5
MS.gene022809.t1 AT3G61960 31.933 119 73 3 232 344 153 269 4.06e-11 65.5
MS.gene022809.t1 AT1G30270 34.343 99 57 3 251 344 95 190 4.20e-11 64.7
MS.gene022809.t1 AT3G61960 31.933 119 73 3 232 344 153 269 4.56e-11 65.5
MS.gene022809.t1 AT1G30270 34.343 99 57 3 251 344 192 287 5.83e-11 64.7
MS.gene022809.t1 AT1G30270 34.343 99 57 3 251 344 192 287 6.71e-11 64.3
MS.gene022809.t1 AT5G01820 31.361 169 103 5 17 185 19 174 7.60e-11 64.3
MS.gene022809.t1 AT3G51850 33.962 106 62 3 245 344 210 313 8.53e-11 63.9

Find 84 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGGTCATGATTTCTTTAA+AGG 0.161425 8.1:+85018608 MS.gene022809:CDS
CGATTCTACCGTTGTAATTC+AGG 0.201955 8.1:+85018233 MS.gene022809:CDS
TATGGAACGACGCCGTTTAA+TGG 0.214859 8.1:+85018449 MS.gene022809:CDS
GATTAAGGTGGATGAAATTA+AGG 0.229919 8.1:+85018589 MS.gene022809:CDS
AGTGATTGAGGTGGTGTTAT+AGG 0.234865 8.1:-85018140 None:intergenic
CGCCAAAGGCGTTGTGTTCC+TGG 0.248213 8.1:+85017568 MS.gene022809:CDS
TTGGAGTATTTACACGATTT+AGG 0.250110 8.1:+85018023 MS.gene022809:CDS
AGTTATGTGGGACACGGTTT+TGG 0.278294 8.1:+85018631 MS.gene022809:CDS
TTATGCTGCTGAAATGGTTC+TGG 0.299548 8.1:+85017998 MS.gene022809:CDS
AGTTGAGAATGAGAATAATA+AGG 0.313181 8.1:+85018691 MS.gene022809:CDS
TTATACTCACCACAACCTTT+AGG 0.318858 8.1:-85017677 None:intergenic
ATGGAACGACGCCGTTTAAT+GGG 0.327091 8.1:+85018450 MS.gene022809:CDS
TTTGATTTCTCAACAGATTC+CGG 0.329035 8.1:-85018317 None:intergenic
GGATCCTGACCGTAGGATTA+AGG 0.346389 8.1:+85018574 MS.gene022809:CDS
TCAATTAGTGGAGGAATATA+AGG 0.346588 8.1:-85018668 None:intergenic
GAGAAATCAAAGTCATTTGT+AGG 0.349392 8.1:+85018329 MS.gene022809:CDS
TCAAAGGAACCTGAGTTAAC+AGG 0.352240 8.1:+85018506 MS.gene022809:CDS
GTTGAGAATGAGAATAATAA+GGG 0.355483 8.1:+85018692 MS.gene022809:CDS
TTCTTCTGAAGACCGGTTAC+CGG 0.369643 8.1:-85017597 None:intergenic
CGCCAGGAACACAACGCCTT+TGG 0.369989 8.1:-85017570 None:intergenic
TCATTCTCAACTTCAATTAG+TGG 0.376616 8.1:-85018680 None:intergenic
TTCGAAACTGAGAAGATTGT+TGG 0.376721 8.1:+85017770 MS.gene022809:CDS
TCTTGAATCATCACATTATC+CGG 0.382270 8.1:-85018068 None:intergenic
AGGAGAGAAAACAGCGTTAA+GGG 0.391281 8.1:+85018526 MS.gene022809:CDS
AATGTGATGATTCAAGAAAA+TGG 0.405760 8.1:+85018074 MS.gene022809:CDS
TGTTCTCGGATGACGCCATT+AGG 0.405888 8.1:+85017858 MS.gene022809:CDS
ATTGTTTCTTTCGGAGAGAA+TGG 0.410129 8.1:-85017826 None:intergenic
CGCCGTTTAATGGGACTAAT+AGG 0.410887 8.1:+85018459 MS.gene022809:CDS
GATTTCCCTTCAATAGATTC+CGG 0.412289 8.1:+85018275 MS.gene022809:CDS
GGATTTGATTAGAAGATTGT+TGG 0.412776 8.1:+85018547 MS.gene022809:CDS
TTCCTATTAGTCCCATTAAA+CGG 0.419734 8.1:-85018461 None:intergenic
GCCTTTGGCGCCGCGTCCTA+CGG 0.421995 8.1:-85017555 None:intergenic
GAAGTTGATAGGTGGTCGTT+AGG 0.446559 8.1:+85018404 MS.gene022809:CDS
ATTAAGGTGGATGAAATTAA+GGG 0.448055 8.1:+85018590 MS.gene022809:CDS
GAATAAAATGGAGGAAAAGA+AGG 0.462428 8.1:+85018796 MS.gene022809:CDS
TGCTGAAATGGTTCTGGCAT+TGG 0.470323 8.1:+85018004 MS.gene022809:CDS
CAGGAGAGAAAACAGCGTTA+AGG 0.472024 8.1:+85018525 MS.gene022809:CDS
ACAATCTGAGAAAATGTTCT+CGG 0.477401 8.1:+85017844 MS.gene022809:CDS
ATTTCTTTAAAGGAGTTATG+TGG 0.483739 8.1:+85018618 MS.gene022809:CDS
GTTGTGTTCCTGGCGAGAAC+CGG 0.483956 8.1:+85017578 MS.gene022809:CDS
GCCGTAGGACGCGGCGCCAA+AGG 0.484268 8.1:+85017554 MS.gene022809:CDS
GTGGCACCTGAAATTGTAAA+CGG 0.488187 8.1:+85018365 MS.gene022809:CDS
CCTGAAATTGTAAACGGAAA+AGG 0.489752 8.1:+85018371 MS.gene022809:CDS
TCCTGGCGAGAACCGGTAAC+CGG 0.490149 8.1:+85017585 MS.gene022809:CDS
AACGAGCCGGAATCTATTGA+AGG 0.491060 8.1:-85018281 None:intergenic
CCTCGCAACCGTGGCAAAAG+AGG 0.497510 8.1:-85017743 None:intergenic
GATTAGAAGATTGTTGGAAA+AGG 0.498935 8.1:+85018553 MS.gene022809:CDS
ACCGGTTACCGGTTCTCGCC+AGG 0.501587 8.1:-85017586 None:intergenic
TCATTATCATCATCACTCTC+AGG 0.503655 8.1:-85018761 None:intergenic
CTCGTTGCGTTTGAACGAGC+CGG 0.514506 8.1:-85018294 None:intergenic
GCCATTGATTATTGCAATGG+TGG 0.519726 8.1:+85017797 MS.gene022809:CDS
CTCGTTCAAACGCAACGAGC+CGG 0.520340 8.1:+85018298 MS.gene022809:CDS
TGTGGAGGTGTTTGTTCATG+AGG 0.522190 8.1:+85018730 MS.gene022809:CDS
GATTCTACCGTTGTAATTCA+GGG 0.522587 8.1:+85018234 MS.gene022809:CDS
GCAAAGAATCCTAAAGGTTG+TGG 0.528767 8.1:+85017668 MS.gene022809:CDS
TTTCATCCACCTTAATCCTA+CGG 0.528809 8.1:-85018583 None:intergenic
GTTATTTCCGCCGTAGGACG+CGG 0.531008 8.1:+85017545 MS.gene022809:CDS
AAGAAAGCAAAGAATCCTAA+AGG 0.532151 8.1:+85017662 MS.gene022809:CDS
ACCACCATTGCAATAATCAA+TGG 0.535274 8.1:-85017798 None:intergenic
ATTGTAAACGGAAAAGGTCA+TGG 0.540427 8.1:+85018377 MS.gene022809:CDS
TTCGCCATTGATTATTGCAA+TGG 0.542436 8.1:+85017794 MS.gene022809:CDS
TTTCTTTAAAGGAGTTATGT+GGG 0.543177 8.1:+85018619 MS.gene022809:CDS
AGAGAGATCCACTCCTTCAA+AGG 0.544438 8.1:+85018181 MS.gene022809:CDS
TCCACCTTAATCCTACGGTC+AGG 0.548911 8.1:-85018578 None:intergenic
CCACATATTCTTCTGAAGAC+CGG 0.552579 8.1:-85017604 None:intergenic
TAGTAGTCTCAATGAGAATG+AGG 0.572769 8.1:+85018847 MS.gene022809:CDS
CCGGTCTTCAGAAGAATATG+TGG 0.573603 8.1:+85017604 MS.gene022809:CDS
TTTGGCGCCGCGTCCTACGG+CGG 0.580527 8.1:-85017552 None:intergenic
TTCTCAACTTCAATTAGTGG+AGG 0.582992 8.1:-85018677 None:intergenic
CTAAAAGTTATTTCCGCCGT+AGG 0.589838 8.1:+85017539 MS.gene022809:CDS
AGTTTACAGAGATTTGAAGC+CGG 0.594956 8.1:+85018049 MS.gene022809:CDS
GAGTTGTGACTCAGTGATTG+AGG 0.613958 8.1:-85018152 None:intergenic
TAAAGGAGTTATGTGGGACA+CGG 0.618901 8.1:+85018625 MS.gene022809:CDS
ACGAGCCGGAATCTATTGAA+GGG 0.635860 8.1:-85018280 None:intergenic
TCCTGACCGTAGGATTAAGG+TGG 0.638813 8.1:+85018577 MS.gene022809:CDS
TCGAAAACACCTCGCAACCG+TGG 0.639844 8.1:-85017752 None:intergenic
GTTTCTTTCGGAGAGAATGG+AGG 0.645654 8.1:-85017823 None:intergenic
TGGAAAAGGATCCTGACCGT+AGG 0.652450 8.1:+85018567 MS.gene022809:CDS
TTGAGAATGAGAATAATAAG+GGG 0.663639 8.1:+85018693 MS.gene022809:CDS
ATTAGTGGAGGAATATAAGG+TGG 0.675420 8.1:-85018665 None:intergenic
GTGAGATCCCTGAATTACAA+CGG 0.705015 8.1:-85018241 None:intergenic
TTGTGACTCAGTGATTGAGG+TGG 0.721106 8.1:-85018149 None:intergenic
GAAGGGAAATCTGAGTCACA+CGG 0.728308 8.1:-85018263 None:intergenic
TGTAGGAACAGAAGAGTACG+TGG 0.744156 8.1:+85018346 MS.gene022809:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGTTTTGAATTT+TGG + chr8.1:85017967-85017986 MS.gene022809:intron 10.0%
!! AGAGAAAAAGAAGAATAAAA+TGG + chr8.1:85018784-85018803 MS.gene022809:CDS 20.0%
! AAAAGAAGGATAAAAAAGTG+TGG + chr8.1:85018810-85018829 MS.gene022809:CDS 25.0%
! AATGTGATGATTCAAGAAAA+TGG + chr8.1:85018074-85018093 MS.gene022809:CDS 25.0%
! AGTTGAGAATGAGAATAATA+AGG + chr8.1:85018691-85018710 MS.gene022809:CDS 25.0%
! ATTAAGGTGGATGAAATTAA+GGG + chr8.1:85018590-85018609 MS.gene022809:CDS 25.0%
! GAAAAAGAAGAATAAAATGG+AGG + chr8.1:85018787-85018806 MS.gene022809:CDS 25.0%
! GTATAGTAAAAATTATGTGG+AGG + chr8.1:85018715-85018734 MS.gene022809:CDS 25.0%
! GTTGAGAATGAGAATAATAA+GGG + chr8.1:85018692-85018711 MS.gene022809:CDS 25.0%
! TTGAGAATGAGAATAATAAG+GGG + chr8.1:85018693-85018712 MS.gene022809:CDS 25.0%
!! AAAGAAGGATAAAAAAGTGT+GGG + chr8.1:85018811-85018830 MS.gene022809:CDS 25.0%
!! ATTTCTTTAAAGGAGTTATG+TGG + chr8.1:85018618-85018637 MS.gene022809:CDS 25.0%
!! GTTTTATACGAAATGTTGTA+TGG + chr8.1:85018431-85018450 MS.gene022809:CDS 25.0%
!! TTTCTTTAAAGGAGTTATGT+GGG + chr8.1:85018619-85018638 MS.gene022809:CDS 25.0%
!!! TTTGTTTTGAATTTTGGTGA+AGG + chr8.1:85017973-85017992 MS.gene022809:intron 25.0%
!!! TTTTCTCAGATTGTTTCTTT+CGG - chr8.1:85017838-85017857 None:intergenic 25.0%
AAGAAAGCAAAGAATCCTAA+AGG + chr8.1:85017662-85017681 MS.gene022809:CDS 30.0%
AAGGGTCATGATTTCTTTAA+AGG + chr8.1:85018608-85018627 MS.gene022809:CDS 30.0%
ACAATCTGAGAAAATGTTCT+CGG + chr8.1:85017844-85017863 MS.gene022809:CDS 30.0%
GAATAAAATGGAGGAAAAGA+AGG + chr8.1:85018796-85018815 MS.gene022809:CDS 30.0%
GAGAAATCAAAGTCATTTGT+AGG + chr8.1:85018329-85018348 MS.gene022809:CDS 30.0%
GATTAAGGTGGATGAAATTA+AGG + chr8.1:85018589-85018608 MS.gene022809:CDS 30.0%
GATTAGAAGATTGTTGGAAA+AGG + chr8.1:85018553-85018572 MS.gene022809:CDS 30.0%
GGATTTGATTAGAAGATTGT+TGG + chr8.1:85018547-85018566 MS.gene022809:CDS 30.0%
GGGGTATAGTAAAAATTATG+TGG + chr8.1:85018712-85018731 MS.gene022809:CDS 30.0%
TCAATTAGTGGAGGAATATA+AGG - chr8.1:85018671-85018690 None:intergenic 30.0%
TCATTCTCAACTTCAATTAG+TGG - chr8.1:85018683-85018702 None:intergenic 30.0%
TCTGTATACAACATACCTAA+TGG - chr8.1:85017876-85017895 None:intergenic 30.0%
TCTTGAATCATCACATTATC+CGG - chr8.1:85018071-85018090 None:intergenic 30.0%
TTCCTATTAGTCCCATTAAA+CGG - chr8.1:85018464-85018483 None:intergenic 30.0%
! ATAGGAAAGAAACGTTTTAC+AGG + chr8.1:85018477-85018496 MS.gene022809:CDS 30.0%
! GTTTTACAGGATTTTGTCAA+AGG + chr8.1:85018490-85018509 MS.gene022809:CDS 30.0%
! TTGGAGTATTTACACGATTT+AGG + chr8.1:85018023-85018042 MS.gene022809:CDS 30.0%
! TTTGATTTCTCAACAGATTC+CGG - chr8.1:85018320-85018339 None:intergenic 30.0%
ACCACCATTGCAATAATCAA+TGG - chr8.1:85017801-85017820 None:intergenic 35.0%
ATTAGTGGAGGAATATAAGG+TGG - chr8.1:85018668-85018687 None:intergenic 35.0%
ATTGTAAACGGAAAAGGTCA+TGG + chr8.1:85018377-85018396 MS.gene022809:CDS 35.0%
CCTGAAATTGTAAACGGAAA+AGG + chr8.1:85018371-85018390 MS.gene022809:CDS 35.0%
GATTCTACCGTTGTAATTCA+GGG + chr8.1:85018234-85018253 MS.gene022809:CDS 35.0%
GATTTCCCTTCAATAGATTC+CGG + chr8.1:85018275-85018294 MS.gene022809:CDS 35.0%
TAGTAGTCTCAATGAGAATG+AGG + chr8.1:85018847-85018866 MS.gene022809:CDS 35.0%
TCATTATCATCATCACTCTC+AGG - chr8.1:85018764-85018783 None:intergenic 35.0%
TTATACTCACCACAACCTTT+AGG - chr8.1:85017680-85017699 None:intergenic 35.0%
TTCGAAACTGAGAAGATTGT+TGG + chr8.1:85017770-85017789 MS.gene022809:CDS 35.0%
TTCTCAACTTCAATTAGTGG+AGG - chr8.1:85018680-85018699 None:intergenic 35.0%
TTTCATCCACCTTAATCCTA+CGG - chr8.1:85018586-85018605 None:intergenic 35.0%
! AGTTTACAGAGATTTGAAGC+CGG + chr8.1:85018049-85018068 MS.gene022809:CDS 35.0%
! ATTGTTTCTTTCGGAGAGAA+TGG - chr8.1:85017829-85017848 None:intergenic 35.0%
! CCTTTTCCGTTTACAATTTC+AGG - chr8.1:85018374-85018393 None:intergenic 35.0%
! TACGGCGGAAATAACTTTTA+GGG - chr8.1:85017540-85017559 None:intergenic 35.0%
! TTCGCCATTGATTATTGCAA+TGG + chr8.1:85017794-85017813 MS.gene022809:CDS 35.0%
!! AAGGTTTTATGCTGCTGAAA+TGG + chr8.1:85017992-85018011 MS.gene022809:intron 35.0%
!! GTGATTTTACTCTGTCGTTT+TGG - chr8.1:85017505-85017524 None:intergenic 35.0%
!!! ATGGTTTTGAAGTTGATAGG+TGG + chr8.1:85018396-85018415 MS.gene022809:CDS 35.0%
!!! GTCATGGTTTTGAAGTTGAT+AGG + chr8.1:85018393-85018412 MS.gene022809:CDS 35.0%
!!! TTTTACTCTGTCGTTTTGGT+TGG - chr8.1:85017501-85017520 None:intergenic 35.0%
AGGAGAGAAAACAGCGTTAA+GGG + chr8.1:85018526-85018545 MS.gene022809:CDS 40.0%
CGATTCTACCGTTGTAATTC+AGG + chr8.1:85018233-85018252 MS.gene022809:CDS 40.0%
GCAAAGAATCCTAAAGGTTG+TGG + chr8.1:85017668-85017687 MS.gene022809:CDS 40.0%
GTGAGATCCCTGAATTACAA+CGG - chr8.1:85018244-85018263 None:intergenic 40.0%
GTGGCACCTGAAATTGTAAA+CGG + chr8.1:85018365-85018384 MS.gene022809:CDS 40.0%
TAAAGGAGTTATGTGGGACA+CGG + chr8.1:85018625-85018644 MS.gene022809:CDS 40.0%
TCAAAGGAACCTGAGTTAAC+AGG + chr8.1:85018506-85018525 MS.gene022809:CDS 40.0%
TTATGCTGCTGAAATGGTTC+TGG + chr8.1:85017998-85018017 MS.gene022809:CDS 40.0%
! CCACATATTCTTCTGAAGAC+CGG - chr8.1:85017607-85017626 None:intergenic 40.0%
! CTAAAAGTTATTTCCGCCGT+AGG + chr8.1:85017539-85017558 MS.gene022809:CDS 40.0%
! CTACGGCGGAAATAACTTTT+AGG - chr8.1:85017541-85017560 None:intergenic 40.0%
! GCCATTGATTATTGCAATGG+TGG + chr8.1:85017797-85017816 MS.gene022809:CDS 40.0%
! GTTTTCTCTCCTGTTAACTC+AGG - chr8.1:85018518-85018537 None:intergenic 40.0%
! TTCGTGTGCTTTTCCTTTGA+AGG - chr8.1:85018197-85018216 None:intergenic 40.0%
! TTGATCTACCTCTTTTGCCA+CGG + chr8.1:85017735-85017754 MS.gene022809:CDS 40.0%
!! AGTGATTGAGGTGGTGTTAT+AGG - chr8.1:85018143-85018162 None:intergenic 40.0%
AACGAGCCGGAATCTATTGA+AGG - chr8.1:85018284-85018303 None:intergenic 45.0%
ACGAGCCGGAATCTATTGAA+GGG - chr8.1:85018283-85018302 None:intergenic 45.0%
AGAGAGATCCACTCCTTCAA+AGG + chr8.1:85018181-85018200 MS.gene022809:CDS 45.0%
ATGGAACGACGCCGTTTAAT+GGG + chr8.1:85018450-85018469 MS.gene022809:CDS 45.0%
CAGGAGAGAAAACAGCGTTA+AGG + chr8.1:85018525-85018544 MS.gene022809:CDS 45.0%
CCGGTCTTCAGAAGAATATG+TGG + chr8.1:85017604-85017623 MS.gene022809:CDS 45.0%
CGCCGTTTAATGGGACTAAT+AGG + chr8.1:85018459-85018478 MS.gene022809:CDS 45.0%
GAAGGGAAATCTGAGTCACA+CGG - chr8.1:85018266-85018285 None:intergenic 45.0%
GAGTTGTGACTCAGTGATTG+AGG - chr8.1:85018155-85018174 None:intergenic 45.0%
GTTTCTTTCGGAGAGAATGG+AGG - chr8.1:85017826-85017845 None:intergenic 45.0%
TATGGAACGACGCCGTTTAA+TGG + chr8.1:85018449-85018468 MS.gene022809:CDS 45.0%
TTGTGACTCAGTGATTGAGG+TGG - chr8.1:85018152-85018171 None:intergenic 45.0%
! AGTTATGTGGGACACGGTTT+TGG + chr8.1:85018631-85018650 MS.gene022809:CDS 45.0%
! TGTAGGAACAGAAGAGTACG+TGG + chr8.1:85018346-85018365 MS.gene022809:CDS 45.0%
! TTCTTCTGAAGACCGGTTAC+CGG - chr8.1:85017600-85017619 None:intergenic 45.0%
!! GAAGTTGATAGGTGGTCGTT+AGG + chr8.1:85018404-85018423 MS.gene022809:CDS 45.0%
!! GTGCTTTTCCTTTGAAGGAG+TGG - chr8.1:85018192-85018211 None:intergenic 45.0%
!! TGCTGAAATGGTTCTGGCAT+TGG + chr8.1:85018004-85018023 MS.gene022809:CDS 45.0%
!! TGTGGAGGTGTTTGTTCATG+AGG + chr8.1:85018730-85018749 MS.gene022809:CDS 45.0%
GGATCCTGACCGTAGGATTA+AGG + chr8.1:85018574-85018593 MS.gene022809:CDS 50.0%
TCCACCTTAATCCTACGGTC+AGG - chr8.1:85018581-85018600 None:intergenic 50.0%
TCCTGACCGTAGGATTAAGG+TGG + chr8.1:85018577-85018596 MS.gene022809:CDS 50.0%
TGGAAAAGGATCCTGACCGT+AGG + chr8.1:85018567-85018586 MS.gene022809:CDS 50.0%
TGTTCTCGGATGACGCCATT+AGG + chr8.1:85017858-85017877 MS.gene022809:CDS 50.0%
!!! GTGGGACACGGTTTTGGAAT+TGG + chr8.1:85018637-85018656 MS.gene022809:CDS 50.0%
CTCGTTCAAACGCAACGAGC+CGG + chr8.1:85018298-85018317 MS.gene022809:CDS 55.0%
CTCGTTGCGTTTGAACGAGC+CGG - chr8.1:85018297-85018316 None:intergenic 55.0%
GTTGTGTTCCTGGCGAGAAC+CGG + chr8.1:85017578-85017597 MS.gene022809:CDS 55.0%
TCGAAAACACCTCGCAACCG+TGG - chr8.1:85017755-85017774 None:intergenic 55.0%
! GTTATTTCCGCCGTAGGACG+CGG + chr8.1:85017545-85017564 MS.gene022809:CDS 55.0%
CCTCGCAACCGTGGCAAAAG+AGG - chr8.1:85017746-85017765 None:intergenic 60.0%
CGCCAGGAACACAACGCCTT+TGG - chr8.1:85017573-85017592 None:intergenic 60.0%
TCCTGGCGAGAACCGGTAAC+CGG + chr8.1:85017585-85017604 MS.gene022809:CDS 60.0%
! CCTCTTTTGCCACGGTTGCG+AGG + chr8.1:85017743-85017762 MS.gene022809:CDS 60.0%
!! CGCCAAAGGCGTTGTGTTCC+TGG + chr8.1:85017568-85017587 MS.gene022809:CDS 60.0%
!! ACCGGTTACCGGTTCTCGCC+AGG - chr8.1:85017589-85017608 None:intergenic 65.0%
GCCTTTGGCGCCGCGTCCTA+CGG - chr8.1:85017558-85017577 None:intergenic 70.0%
TTTGGCGCCGCGTCCTACGG+CGG - chr8.1:85017555-85017574 None:intergenic 70.0%
GCCGTAGGACGCGGCGCCAA+AGG + chr8.1:85017554-85017573 MS.gene022809:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 85017482 85018886 85017482 ID=MS.gene022809
chr8.1 mRNA 85017482 85018886 85017482 ID=MS.gene022809.t1;Parent=MS.gene022809
chr8.1 exon 85017482 85017879 85017482 ID=MS.gene022809.t1.exon1;Parent=MS.gene022809.t1
chr8.1 CDS 85017482 85017879 85017482 ID=cds.MS.gene022809.t1;Parent=MS.gene022809.t1
chr8.1 exon 85017995 85018886 85017995 ID=MS.gene022809.t1.exon2;Parent=MS.gene022809.t1
chr8.1 CDS 85017995 85018886 85017995 ID=cds.MS.gene022809.t1;Parent=MS.gene022809.t1
Gene Sequence

>MS.gene022809

ATGAACGACAGCAACACCAACCAAAACGACAGAGTAAAATCACTAGATTTCAAAACCCTAAAAGTTATTTCCGCCGTAGGACGCGGCGCCAAAGGCGTTGTGTTCCTGGCGAGAACCGGTAACCGGTCTTCAGAAGAATATGTGGCTCTGAAAGTAATGTCTAAAGCTCTCATAGATCAGAAGAAAGCAAAGAATCCTAAAGGTTGTGGTGAGTATAAGAGAGCATCGTTTGAACAAGAAGTGCTACGTAGTTTTGATCTACCTCTTTTGCCACGGTTGCGAGGTGTTTTCGAAACTGAGAAGATTGTTGGATTCGCCATTGATTATTGCAATGGTGGTAACCTCCATTCTCTCCGAAAGAAACAATCTGAGAAAATGTTCTCGGATGACGCCATTAGGTATGTTGTATACAGATTCAGCTCTTGACGTTTCGATTTGTCTGAACAATAATATATTTCTTATTGTTACTTAGATCTTGATTTTGATTTTTTTTTGTTTTGAATTTTGGTGAAGGTTTTATGCTGCTGAAATGGTTCTGGCATTGGAGTATTTACACGATTTAGGAATAGTTTACAGAGATTTGAAGCCGGATAATGTGATGATTCAAGAAAATGGTCACATAATGCTCGTAGATTTCGATCTCTCTACAAAGCTGAAACCTATAACACCACCTCAATCACTGAGTCACAACTCGTCTTCAGAGAGATCCACTCCTTCAAAGGAAAAGCACACGAAGAATCGACTGTTCTCGCGATTCTACCGTTGTAATTCAGGGATCTCACCGTGTGACTCAGATTTCCCTTCAATAGATTCCGGCTCGTTCAAACGCAACGAGCCGGAATCTGTTGAGAAATCAAAGTCATTTGTAGGAACAGAAGAGTACGTGGCACCTGAAATTGTAAACGGAAAAGGTCATGGTTTTGAAGTTGATAGGTGGTCGTTAGGTGTTGTTTTATACGAAATGTTGTATGGAACGACGCCGTTTAATGGGACTAATAGGAAAGAAACGTTTTACAGGATTTTGTCAAAGGAACCTGAGTTAACAGGAGAGAAAACAGCGTTAAGGGATTTGATTAGAAGATTGTTGGAAAAGGATCCTGACCGTAGGATTAAGGTGGATGAAATTAAGGGTCATGATTTCTTTAAAGGAGTTATGTGGGACACGGTTTTGGAATTGGCAAGACCACCTTATATTCCTCCACTAATTGAAGTTGAGAATGAGAATAATAAGGGGTATAGTAAAAATTATGTGGAGGTGTTTGTTCATGAGGTATTTTTTCCTGAGAGTGATGATGATAATGAAGAGAAAAAGAAGAATAAAATGGAGGAAAAGAAGGATAAAAAAGTGTGGGTTGATAAGTTGAGTAGTAGTCTCAATGAGAATGAGGATTTTTTGATTTTTTGA
Protein sequence

>MS.gene022809.t1

MNDSNTNQNDRVKSLDFKTLKVISAVGRGAKGVVFLARTGNRSSEEYVALKVMSKALIDQKKAKNPKGCGEYKRASFEQEVLRSFDLPLLPRLRGVFETEKIVGFAIDYCNGGNLHSLRKKQSEKMFSDDAIRFYAAEMVLALEYLHDLGIVYRDLKPDNVMIQENGHIMLVDFDLSTKLKPITPPQSLSHNSSSERSTPSKEKHTKNRLFSRFYRCNSGISPCDSDFPSIDSGSFKRNEPESVEKSKSFVGTEEYVAPEIVNGKGHGFEVDRWSLGVVLYEMLYGTTPFNGTNRKETFYRILSKEPELTGEKTALRDLIRRLLEKDPDRRIKVDEIKGHDFFKGVMWDTVLELARPPYIPPLIEVENENNKGYSKNYVEVFVHEVFFPESDDDNEEKKKNKMEEKKDKKVWVDKLSSSLNENEDFLIF