Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023278.t1 | ACJ84591.1 | 97.2 | 213 | 6 | 0 | 1 | 213 | 1 | 213 | 4.00E-112 | 414.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023278.t1 | Q67ZF6 | 62.4 | 205 | 74 | 3 | 6 | 208 | 17 | 220 | 5.9e-64 | 245.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023278.t1 | B7FIL2 | 97.2 | 213 | 6 | 0 | 1 | 213 | 1 | 213 | 2.9e-112 | 414.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023278 | MS.gene78729 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023278.t1 | MTR_1g033390 | 59.048 | 210 | 84 | 2 | 1 | 208 | 1 | 210 | 1.88e-84 | 249 |
| MS.gene023278.t1 | MTR_1g033360 | 43.750 | 208 | 114 | 3 | 1 | 206 | 7 | 213 | 2.44e-56 | 178 |
| MS.gene023278.t1 | MTR_1g100643 | 39.604 | 202 | 117 | 2 | 9 | 205 | 13 | 214 | 2.04e-52 | 168 |
| MS.gene023278.t1 | MTR_6g017105 | 36.869 | 198 | 119 | 3 | 11 | 202 | 16 | 213 | 2.00e-39 | 135 |
| MS.gene023278.t1 | MTR_1g100643 | 37.267 | 161 | 96 | 2 | 50 | 205 | 1 | 161 | 2.05e-35 | 123 |
| MS.gene023278.t1 | MTR_5g053250 | 35.079 | 191 | 111 | 6 | 10 | 189 | 17 | 205 | 2.46e-26 | 102 |
| MS.gene023278.t1 | MTR_5g053250 | 38.356 | 146 | 83 | 4 | 50 | 189 | 1 | 145 | 2.86e-23 | 92.4 |
| MS.gene023278.t1 | MTR_5g053250 | 30.734 | 218 | 111 | 7 | 10 | 189 | 17 | 232 | 1.47e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023278.t1 | AT1G14730 | 62.136 | 206 | 75 | 3 | 6 | 209 | 17 | 221 | 2.98e-85 | 252 |
| MS.gene023278.t1 | AT4G25570 | 39.048 | 210 | 123 | 3 | 1 | 205 | 5 | 214 | 1.49e-49 | 161 |
| MS.gene023278.t1 | AT4G25570 | 39.048 | 210 | 123 | 3 | 1 | 205 | 46 | 255 | 1.41e-48 | 160 |
| MS.gene023278.t1 | AT5G38630 | 37.073 | 205 | 123 | 3 | 8 | 206 | 13 | 217 | 5.50e-43 | 144 |
| MS.gene023278.t1 | AT1G26100 | 34.104 | 173 | 102 | 5 | 8 | 177 | 13 | 176 | 1.37e-23 | 94.7 |
Find 50 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTATAGTACCTCAATTT+TGG | 0.192371 | 4.3:-17408283 | MS.gene023278:CDS |
| CATTTCATTGCCATAGTTCT+TGG | 0.208807 | 4.3:-17407234 | MS.gene023278:CDS |
| CCCTCATCCTTATGCTTGTT+TGG | 0.262566 | 4.3:-17408239 | MS.gene023278:CDS |
| GGTCTAGCAATTCTCTTGTT+TGG | 0.264168 | 4.3:-17406598 | MS.gene023278:CDS |
| ATTCACTTCAAGAAACAATA+TGG | 0.266766 | 4.3:+17406545 | None:intergenic |
| ATGTTTACAGCCTCCATTCA+TGG | 0.312973 | 4.3:-17407158 | MS.gene023278:CDS |
| GCAATTTGTGCTGCACTAAC+AGG | 0.327192 | 4.3:-17406691 | MS.gene023278:CDS |
| GCCATAGTTCTTGGAATTGT+TGG | 0.333746 | 4.3:-17407225 | MS.gene023278:CDS |
| CTCCATTCATGGATTGGCCT+TGG | 0.364175 | 4.3:-17407147 | MS.gene023278:CDS |
| TGATGAGATGGGATTCTCTT+TGG | 0.375896 | 4.3:+17406629 | None:intergenic |
| TGCTGCACTAACAGGTTTGA+TGG | 0.381294 | 4.3:-17406683 | MS.gene023278:CDS |
| ACCAACAATTCCAAGAACTA+TGG | 0.394185 | 4.3:+17407224 | None:intergenic |
| TACAGCCTCCATTCATGGAT+TGG | 0.402679 | 4.3:-17407153 | MS.gene023278:CDS |
| TGTGGATATGACAGTTGGTT+TGG | 0.414085 | 4.3:-17406569 | MS.gene023278:CDS |
| TTCTGTGTTTCAAGTGTGCC+TGG | 0.436038 | 4.3:+17407276 | None:intergenic |
| AACCCAAAGAACATCAGAAA+AGG | 0.444479 | 4.3:+17408058 | None:intergenic |
| GACCAGTAAAATTGATGAGA+TGG | 0.463258 | 4.3:+17406617 | None:intergenic |
| GGACTGACATTCATGTTTCA+AGG | 0.471960 | 4.3:-17406781 | MS.gene023278:CDS |
| TTCACTTCAAGAAACAATAT+GGG | 0.499824 | 4.3:+17406546 | None:intergenic |
| CTGCAAGCCAAACAAGCAAA+AGG | 0.518582 | 4.3:+17407122 | None:intergenic |
| GCAGCAACCAAACAAGCATA+AGG | 0.521345 | 4.3:+17408232 | None:intergenic |
| CAACCAAGTTCACCATATCA+TGG | 0.523417 | 4.3:+17407181 | None:intergenic |
| AAGACAATCAAGGGCTGCAA+TGG | 0.527559 | 4.3:-17406755 | MS.gene023278:CDS |
| ATGTCTTACCACACAGTACC+AGG | 0.530006 | 4.3:-17407294 | MS.gene023278:CDS |
| CATATCATGGAACTTGAAAA+CGG | 0.532163 | 4.3:+17407194 | None:intergenic |
| CACTAACAGGTTTGATGGAG+AGG | 0.533891 | 4.3:-17406678 | MS.gene023278:CDS |
| ACCAGTAAAATTGATGAGAT+GGG | 0.537855 | 4.3:+17406618 | None:intergenic |
| TGCCAAGGCCAATCCATGAA+TGG | 0.541924 | 4.3:+17407145 | None:intergenic |
| ATGGCTCCATGGCACATAGC+TGG | 0.542007 | 4.3:-17406736 | MS.gene023278:CDS |
| GTTCCATGATATGGTGAACT+TGG | 0.544949 | 4.3:-17407184 | MS.gene023278:CDS |
| ACCAAACAAGCATAAGGATG+AGG | 0.552123 | 4.3:+17408238 | None:intergenic |
| CAAGGGCTGCAATGGCTCCA+TGG | 0.553808 | 4.3:-17406747 | MS.gene023278:CDS |
| TTCAAGGAAGAAGACAATCA+AGG | 0.557731 | 4.3:-17406765 | MS.gene023278:CDS |
| ACCCAAAGAACATCAGAAAA+GGG | 0.558431 | 4.3:+17408059 | None:intergenic |
| CAAACAAGCAAAAGGTGCCA+AGG | 0.564883 | 4.3:+17407130 | None:intergenic |
| TCAAGGAAGAAGACAATCAA+GGG | 0.567109 | 4.3:-17406764 | MS.gene023278:CDS |
| CTACCACCAGCTATGTGCCA+TGG | 0.572574 | 4.3:+17406730 | None:intergenic |
| GAGGGGATTGAATATGACTC+TGG | 0.574307 | 4.3:-17408201 | MS.gene023278:CDS |
| TGGTTGCTGCATTACCGTGA+GGG | 0.574869 | 4.3:-17408219 | MS.gene023278:CDS |
| GGTTGCTGCATTACCGTGAG+GGG | 0.582408 | 4.3:-17408218 | MS.gene023278:CDS |
| CATACATTGAAAACACGAAG+TGG | 0.594783 | 4.3:+17408174 | None:intergenic |
| AGATGGGATTCTCTTTGGTG+TGG | 0.600431 | 4.3:+17406634 | None:intergenic |
| AAACAAGTGAGCCAAAATTG+AGG | 0.600449 | 4.3:+17408272 | None:intergenic |
| CCAAACAAGCATAAGGATGA+GGG | 0.611153 | 4.3:+17408239 | None:intergenic |
| AATACATACCTTGACCAACA+AGG | 0.644453 | 4.3:+17408029 | None:intergenic |
| CAAGGCCAATCCATGAATGG+AGG | 0.654155 | 4.3:+17407148 | None:intergenic |
| AGTCATATTCAATCCCCTCA+CGG | 0.654951 | 4.3:+17408205 | None:intergenic |
| GCTCCATGGCACATAGCTGG+TGG | 0.673506 | 4.3:-17406733 | MS.gene023278:CDS |
| TTGGTTGCTGCATTACCGTG+AGG | 0.689331 | 4.3:-17408220 | MS.gene023278:CDS |
| CAAGTGTGCCTGGTACTGTG+TGG | 0.716723 | 4.3:+17407286 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTAGCTTTAAAATATA+AGG | + | chr4.3:17407218-17407237 | None:intergenic | 10.0% |
| !! | TAAATTCAAATGTTATTGTA+GGG | + | chr4.3:17407756-17407775 | None:intergenic | 15.0% |
| !! | TTAAATTCAAATGTTATTGT+AGG | + | chr4.3:17407757-17407776 | None:intergenic | 15.0% |
| !! | TTTCTGTTACTAATAATATT+TGG | + | chr4.3:17407462-17407481 | None:intergenic | 15.0% |
| !!! | TTTATTTCAAGTTTTAAGAT+AGG | - | chr4.3:17406835-17406854 | MS.gene023278:intron | 15.0% |
| !! | ATATTTAAACTTAGACATTG+AGG | - | chr4.3:17406943-17406962 | MS.gene023278:intron | 20.0% |
| !! | TAAAAAATATGCAAGTTCTA+TGG | + | chr4.3:17407185-17407204 | None:intergenic | 20.0% |
| !! | TAAATTTAATAAAATGTCGC+TGG | + | chr4.3:17407989-17408008 | None:intergenic | 20.0% |
| !! | TGTTACTAATAATATTTGGT+TGG | + | chr4.3:17407458-17407477 | None:intergenic | 20.0% |
| !!! | AATATAAACTATTTTTGCAG+TGG | - | chr4.3:17408030-17408049 | MS.gene023278:intron | 20.0% |
| ! | AAAATCGTTCAAAAACTCAA+TGG | + | chr4.3:17407127-17407146 | None:intergenic | 25.0% |
| ! | GATAGTTTACACTTAACAAT+TGG | - | chr4.3:17406714-17406733 | MS.gene023278:CDS | 25.0% |
| ! | TACTAATAATATTTGGTTGG+AGG | + | chr4.3:17407455-17407474 | None:intergenic | 25.0% |
| ! | TTGAATTTAACCAAAAAGCA+TGG | - | chr4.3:17407767-17407786 | MS.gene023278:intron | 25.0% |
| !! | TTCTTATAGTACCTCAATTT+TGG | - | chr4.3:17406557-17406576 | MS.gene023278:CDS | 25.0% |
| !!! | ATTTCAAGTTTTAAGATAGG+TGG | - | chr4.3:17406838-17406857 | MS.gene023278:intron | 25.0% |
| !!! | CGTAAACTTCTACTTTTAAA+AGG | + | chr4.3:17406920-17406939 | None:intergenic | 25.0% |
| !!! | TTTGAACGATTTTGAAGTAT+TGG | - | chr4.3:17407134-17407153 | MS.gene023278:CDS | 25.0% |
| AAAATATGCAAGTTCTATGG+TGG | + | chr4.3:17407182-17407201 | None:intergenic | 30.0% | |
| AAGTACTTGACTGATTGAAT+TGG | - | chr4.3:17407499-17407518 | MS.gene023278:intron | 30.0% | |
| AATTCAATCAGTCAAGTACT+TGG | + | chr4.3:17407500-17407519 | None:intergenic | 30.0% | |
| ACCAGTAAAATTGATGAGAT+GGG | + | chr4.3:17408225-17408244 | None:intergenic | 30.0% | |
| CATATCATGGAACTTGAAAA+CGG | + | chr4.3:17407649-17407668 | None:intergenic | 30.0% | |
| !!! | TTTTAAGTATTGATCCACGT+CGG | + | chr4.3:17406865-17406884 | None:intergenic | 30.0% |
| AAACAAGTGAGCCAAAATTG+AGG | + | chr4.3:17406571-17406590 | None:intergenic | 35.0% | |
| AACCCAAAGAACATCAGAAA+AGG | + | chr4.3:17406785-17406804 | None:intergenic | 35.0% | |
| AATACATACCTTGACCAACA+AGG | + | chr4.3:17406814-17406833 | None:intergenic | 35.0% | |
| ACCAACAATTCCAAGAACTA+TGG | + | chr4.3:17407619-17407638 | None:intergenic | 35.0% | |
| ACCCAAAGAACATCAGAAAA+GGG | + | chr4.3:17406784-17406803 | None:intergenic | 35.0% | |
| CATACATTGAAAACACGAAG+TGG | + | chr4.3:17406669-17406688 | None:intergenic | 35.0% | |
| CATTTCATTGCCATAGTTCT+TGG | - | chr4.3:17407606-17407625 | MS.gene023278:intron | 35.0% | |
| GACCAGTAAAATTGATGAGA+TGG | + | chr4.3:17408226-17408245 | None:intergenic | 35.0% | |
| TCAAGGAAGAAGACAATCAA+GGG | - | chr4.3:17408076-17408095 | MS.gene023278:intron | 35.0% | |
| TTCAAGGAAGAAGACAATCA+AGG | - | chr4.3:17408075-17408094 | MS.gene023278:intron | 35.0% | |
| ! | AACTCAATGGTAAGTGTTGT+TGG | + | chr4.3:17407114-17407133 | None:intergenic | 35.0% |
| ! | ACCCTTTTCTGATGTTCTTT+GGG | - | chr4.3:17406780-17406799 | MS.gene023278:CDS | 35.0% |
| ! | ACGGTTCTTGTTATAACATG+AGG | + | chr4.3:17407072-17407091 | None:intergenic | 35.0% |
| ! | ACTCAATGGTAAGTGTTGTT+GGG | + | chr4.3:17407113-17407132 | None:intergenic | 35.0% |
| ! | ATTGGTCTATTTAGCCACTA+AGG | - | chr4.3:17407152-17407171 | MS.gene023278:CDS | 35.0% |
| ! | GTTTTTGTGGATATGACAGT+TGG | - | chr4.3:17408266-17408285 | MS.gene023278:CDS | 35.0% |
| ! | TCCCATCTCATCAATTTTAC+TGG | - | chr4.3:17408221-17408240 | MS.gene023278:CDS | 35.0% |
| ! | TGAATTTTTCTCCATTCTGC+AGG | - | chr4.3:17406754-17406773 | MS.gene023278:CDS | 35.0% |
| ! | TTCATTTTCCTTGTTGGTCA+AGG | - | chr4.3:17406803-17406822 | MS.gene023278:intron | 35.0% |
| ! | TTGTTCAAAGCCATGCTTTT+TGG | + | chr4.3:17407780-17407799 | None:intergenic | 35.0% |
| !! | GCTTTGGAAGTAGAAGTTTA+CGG | + | chr4.3:17407091-17407110 | None:intergenic | 35.0% |
| !! | TCTCTTGTTTGGAGTTTTTG+TGG | - | chr4.3:17408253-17408272 | MS.gene023278:CDS | 35.0% |
| !! | TGGTAGAGCACTATTTTTCA+TGG | - | chr4.3:17408127-17408146 | MS.gene023278:intron | 35.0% |
| !! | TTTGGGTTCATTTTCCTTGT+TGG | - | chr4.3:17406797-17406816 | MS.gene023278:intron | 35.0% |
| !!! | ATGTCGCTGGTTAGTTTTTT+AGG | + | chr4.3:17407976-17407995 | None:intergenic | 35.0% |
| !!! | CGTTTTCAAGTTCCATGATA+TGG | - | chr4.3:17407647-17407666 | MS.gene023278:intron | 35.0% |
| !!! | CTATTTTTGCAGTGGCTTTT+TGG | - | chr4.3:17408038-17408057 | MS.gene023278:CDS | 35.0% |
| !!! | TCAATTTTGGCTCACTTGTT+TGG | - | chr4.3:17406570-17406589 | MS.gene023278:CDS | 35.0% |
| !!! | TGTCGCTGGTTAGTTTTTTA+GGG | + | chr4.3:17407975-17407994 | None:intergenic | 35.0% |
| ACCAAACAAGCATAAGGATG+AGG | + | chr4.3:17406605-17406624 | None:intergenic | 40.0% | |
| AGTCAAGTACTTGGTATCTG+TGG | + | chr4.3:17407491-17407510 | None:intergenic | 40.0% | |
| AGTCATATTCAATCCCCTCA+CGG | + | chr4.3:17406638-17406657 | None:intergenic | 40.0% | |
| ATGTTTACAGCCTCCATTCA+TGG | - | chr4.3:17407682-17407701 | MS.gene023278:intron | 40.0% | |
| CAACCAAGTTCACCATATCA+TGG | + | chr4.3:17407662-17407681 | None:intergenic | 40.0% | |
| CCAAACAAGCATAAGGATGA+GGG | + | chr4.3:17406604-17406623 | None:intergenic | 40.0% | |
| GCCATAGTTCTTGGAATTGT+TGG | - | chr4.3:17407615-17407634 | MS.gene023278:intron | 40.0% | |
| GGACTGACATTCATGTTTCA+AGG | - | chr4.3:17408059-17408078 | MS.gene023278:CDS | 40.0% | |
| GGTCTAGCAATTCTCTTGTT+TGG | - | chr4.3:17408242-17408261 | MS.gene023278:CDS | 40.0% | |
| GTTCCATGATATGGTGAACT+TGG | - | chr4.3:17407656-17407675 | MS.gene023278:intron | 40.0% | |
| TACGCTGAAAGACTTTCAGA+AGG | - | chr4.3:17407912-17407931 | MS.gene023278:intron | 40.0% | |
| TGATGAGATGGGATTCTCTT+TGG | + | chr4.3:17408214-17408233 | None:intergenic | 40.0% | |
| TGTCCAAAAGATGTAGCGAT+GGG | - | chr4.3:17407885-17407904 | MS.gene023278:intron | 40.0% | |
| TGTGGATATGACAGTTGGTT+TGG | - | chr4.3:17408271-17408290 | MS.gene023278:CDS | 40.0% | |
| ! | CACCCTTTTCTGATGTTCTT+TGG | - | chr4.3:17406779-17406798 | MS.gene023278:CDS | 40.0% |
| AAAAGGGTGAACCTGCAGAA+TGG | + | chr4.3:17406768-17406787 | None:intergenic | 45.0% | |
| AAGACAATCAAGGGCTGCAA+TGG | - | chr4.3:17408085-17408104 | MS.gene023278:intron | 45.0% | |
| AAGTACTTGGTATCTGTGGC+TGG | + | chr4.3:17407487-17407506 | None:intergenic | 45.0% | |
| AGATGGGATTCTCTTTGGTG+TGG | + | chr4.3:17408209-17408228 | None:intergenic | 45.0% | |
| ATGTCTTACCACACAGTACC+AGG | - | chr4.3:17407546-17407565 | MS.gene023278:intron | 45.0% | |
| CAAAAGATGTAGCGATGGGT+TGG | - | chr4.3:17407889-17407908 | MS.gene023278:intron | 45.0% | |
| CACTAACAGGTTTGATGGAG+AGG | - | chr4.3:17408162-17408181 | MS.gene023278:intron | 45.0% | |
| CCCTCATCCTTATGCTTGTT+TGG | - | chr4.3:17406601-17406620 | MS.gene023278:CDS | 45.0% | |
| CTGCAAGCCAAACAAGCAAA+AGG | + | chr4.3:17407721-17407740 | None:intergenic | 45.0% | |
| CTGTCCAAAAGATGTAGCGA+TGG | - | chr4.3:17407884-17407903 | MS.gene023278:intron | 45.0% | |
| GAGGGGATTGAATATGACTC+TGG | - | chr4.3:17406639-17406658 | MS.gene023278:CDS | 45.0% | |
| GCAATTTGTGCTGCACTAAC+AGG | - | chr4.3:17408149-17408168 | MS.gene023278:intron | 45.0% | |
| GCAGCAACCAAACAAGCATA+AGG | + | chr4.3:17406611-17406630 | None:intergenic | 45.0% | |
| GGTCTATTTAGCCACTAAGG+CGG | - | chr4.3:17407155-17407174 | MS.gene023278:CDS | 45.0% | |
| TACAGCCTCCATTCATGGAT+TGG | - | chr4.3:17407687-17407706 | MS.gene023278:intron | 45.0% | |
| TGCTGCACTAACAGGTTTGA+TGG | - | chr4.3:17408157-17408176 | MS.gene023278:intron | 45.0% | |
| ! | CAACCCATCGCTACATCTTT+TGG | + | chr4.3:17407891-17407910 | None:intergenic | 45.0% |
| ! | CTTGGCACCTTTTGCTTGTT+TGG | - | chr4.3:17407711-17407730 | MS.gene023278:intron | 45.0% |
| ! | TCGCTACATCTTTTGGACAG+TGG | + | chr4.3:17407884-17407903 | None:intergenic | 45.0% |
| ! | TGGTAAGTGTTGTTGGGCTT+TGG | + | chr4.3:17407107-17407126 | None:intergenic | 45.0% |
| ! | TTCTGTGTTTCAAGTGTGCC+TGG | + | chr4.3:17407567-17407586 | None:intergenic | 45.0% |
| !! | CAAACAAGCAAAAGGTGCCA+AGG | + | chr4.3:17407713-17407732 | None:intergenic | 45.0% |
| !!! | CTTTTGCTTGTTTGGCTTGC+AGG | - | chr4.3:17407719-17407738 | MS.gene023278:intron | 45.0% |
| !!! | TTACTATTTAAAATAAAAAT+TGG | - | chr4.3:17407421-17407440 | MS.gene023278:intron | 5.0% |
| CAAGGCCAATCCATGAATGG+AGG | + | chr4.3:17407695-17407714 | None:intergenic | 50.0% | |
| TGCCAAGGCCAATCCATGAA+TGG | + | chr4.3:17407698-17407717 | None:intergenic | 50.0% | |
| TGGTTGCTGCATTACCGTGA+GGG | - | chr4.3:17406621-17406640 | MS.gene023278:CDS | 50.0% | |
| TTAAGATAGGTGGTCCGACG+TGG | - | chr4.3:17406848-17406867 | MS.gene023278:intron | 50.0% | |
| TTGGTTGCTGCATTACCGTG+AGG | - | chr4.3:17406620-17406639 | MS.gene023278:CDS | 50.0% | |
| !! | CTCCATTCATGGATTGGCCT+TGG | - | chr4.3:17407693-17407712 | MS.gene023278:intron | 50.0% |
| ATGGCTCCATGGCACATAGC+TGG | - | chr4.3:17408104-17408123 | MS.gene023278:intron | 55.0% | |
| CAAGTGTGCCTGGTACTGTG+TGG | + | chr4.3:17407557-17407576 | None:intergenic | 55.0% | |
| CTACCACCAGCTATGTGCCA+TGG | + | chr4.3:17408113-17408132 | None:intergenic | 55.0% | |
| GGTTGCTGCATTACCGTGAG+GGG | - | chr4.3:17406622-17406641 | MS.gene023278:CDS | 55.0% | |
| !! | TCTATGGTGGACCGCCTTAG+TGG | + | chr4.3:17407169-17407188 | None:intergenic | 55.0% |
| CAAGGGCTGCAATGGCTCCA+TGG | - | chr4.3:17408093-17408112 | MS.gene023278:intron | 60.0% | |
| GCTCCATGGCACATAGCTGG+TGG | - | chr4.3:17408107-17408126 | MS.gene023278:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 17406552 | 17408310 | 17406552 | ID=MS.gene023278 |
| chr4.3 | mRNA | 17406552 | 17408310 | 17406552 | ID=MS.gene023278.t1;Parent=MS.gene023278 |
| chr4.3 | exon | 17408179 | 17408310 | 17408179 | ID=MS.gene023278.t1.exon1;Parent=MS.gene023278.t1 |
| chr4.3 | CDS | 17408179 | 17408310 | 17408179 | ID=cds.MS.gene023278.t1;Parent=MS.gene023278.t1 |
| chr4.3 | exon | 17408038 | 17408086 | 17408038 | ID=MS.gene023278.t1.exon2;Parent=MS.gene023278.t1 |
| chr4.3 | CDS | 17408038 | 17408086 | 17408038 | ID=cds.MS.gene023278.t1;Parent=MS.gene023278.t1 |
| chr4.3 | exon | 17407122 | 17407321 | 17407122 | ID=MS.gene023278.t1.exon3;Parent=MS.gene023278.t1 |
| chr4.3 | CDS | 17407122 | 17407321 | 17407122 | ID=cds.MS.gene023278.t1;Parent=MS.gene023278.t1 |
| chr4.3 | exon | 17406552 | 17406812 | 17406552 | ID=MS.gene023278.t1.exon4;Parent=MS.gene023278.t1 |
| chr4.3 | CDS | 17406552 | 17406812 | 17406552 | ID=cds.MS.gene023278.t1;Parent=MS.gene023278.t1 |
| Gene Sequence |
| Protein sequence |
